Rmu_sc0003596.1_g000003

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003596.1
OG0004887
Physical Location & Seq
Forward (+)
11958 .. 15104
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003596.1_g000003.1.cds

Sequence Viewer

Length: 1809 bp
atgggagagagtgagagctctcaaaaccctagcgccgtcgtcgatgggcgtcccctttggaggcttcctttgccttctttccagcgtccgctcaagcgtacgagttctccttgctatggctgcaaggctttcatccttcgatggaacaatcttccaacgacgacaagggatctgattggttgggtgtcttgtgctttatgccttcgggtctggggcttcctgatgttgtgggatcctggcggtactctgatcggtgtgcagccgctcctagccggcaagtggtggaggcgagatcggtcaacaagcaggctgctatgggtgatgcgatggcgtcgatatcaggctaggctggtttctactttcttgcacggtggtggctgggttcttacttggtggctgatcatgttctggtggtggggatggttgcagatcacatcaggtgatggccggtggtggagcttgggttctctgcgttgggtgcccagagtaatctgggctatccagatgggctggggctgggccgacgccacacatatgctgggccagacctttccatgggtctggatctgggacccgggtgaatctttggctacttctttgttaccttggatgatgcctctgggtgtgccaagtttcttttcaggtggattgagcccttctagattctataaaaaggctcggtatagtcatgctgtgagtaccacaattgcgtgctttggcgagcagtgtcccttatgctgggtcgagtctagttttgattggtccgctgatcttttgcatgcccgaattgcaaattctgattgttgggtctacaaatctcaaggtcatgacaatggttgtgttgttggtaattatcttgaggacaatgaggatttacctttagaatttgctagtttttatagaaaagtttcagagcagagttttattgtacaaggacaattggttgatgtagtacatcttctaccagagacgtcgttgagctcattgttggagcagcaagaggaagaaggcggagagtgctcctccgccggaactggagattggagagagaaagggagaaaccaaatggcaccgggactaagttcaacgagtacgccgacgctgacagggagggagctggtgaggttgccggaattctatacgaagcatcctgaggttttcatcttgatgagccaaagatttgggaagccggaattcaatctggctcgactccgacaaggagggagcaacggggagggagggaggaagggagagagagagagagaggagatagatgagagtgacaaaaaaattcgccggtcgtcagaaactgtaacgttatccttattcgagaagatcaaggtgttgaaggagcccaagaagagcatcggaaaccgtagcgcctcctaccagttggcctcggtgggcaaggggaccaatactgcgactgtgccgtcttcgtcgtccagtggctgccagtccgactcgacggggaggaagatttatgtcatcagcgtgtcgcatgaggctgacgccaagaaattgagggctttgtttgggagatttagggaaattgagaccgggcagatgggtgcgaagaaggcacttgaggaagtggtgaaggtgtttgaagggcaccaattgaattgcaagaaggccactgagggcagtttagttcccattccggcaaccgaaagatctattgggtggcaacaaacctctccgggtccatatgagatctccgacaaccactttgaggacatccggcaaggtttcataaactgctattgcaccacaataaaggttctattgcccttctattggggctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006366 GO:0006396 GO:0006397 GO:0006401 GO:0006417 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009299 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0010638 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031974 GO:0031981 GO:0032204 GO:0032206 GO:0032268 GO:0032270 GO:0032501 GO:0032774 GO:0032991 GO:0033043 GO:0033044 GO:0034248 GO:0034250 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042752 GO:0042789 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0043565 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0045893 GO:0045935 GO:0046483 GO:0046700 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097167 GO:0097659 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1902680 GO:1903311 GO:1903506 GO:1903508 GO:1904353 GO:1904355 GO:1905661 GO:1905663 GO:1990904 GO:2000112 GO:2000278 GO:2000573 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

602

Amino Acids

68.16

Weight (kDa)

8.81

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1432
AatII GACGTC 1 cut(s) 974
AccB1I GGYRCC 3 cut(s) 478, 1069, 1614
AccBSI CCGCTC 2 cut(s) 91, 265
AccI GTMKAC 1 cut(s) 810
AciI CCGC 6 cut(s) 89, 240, 263, 765, 1011, 1026
AclI AACGTT 1 cut(s) 1316
AclWI GGATC 4 cut(s) 177, 227, 240, 572
AcoI YGGCCR 1 cut(s) 445
AcsI RAATTY 5 cut(s) 793, 884, 1133, 1193, 1290
AcyI GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
AfaI GTAC 6 cut(s) 100, 244, 700, 930, 954, 1093
AfiI CCNNNNNNNGG 7 cut(s) 60, 116, 279, 555, 738, 1735, 1800
AgsI TTSAA 5 cut(s) 1086, 1198, 1348, 1610, 1624
AjnI CCWGG 1 cut(s) 235
AjuI GAANNNNNNNTTGG 6 cut(s) 622, 654, 1024, 1056, 1665, 1697
AleI CACNNNNGTG 1 cut(s) 372
AloI GAACNNNNNNTCC 2 cut(s) 448, 480
AluBI AGCT 4 cut(s) 18, 459, 981, 1117
AluI AGCT 4 cut(s) 18, 459, 981, 1117
Alw21I GWGCWC 3 cut(s) 20, 983, 1022
Alw26I GTCTC 2 cut(s) 962, 1550
AlwI GGATC 4 cut(s) 177, 227, 240, 572
AlwNI CAGNNNCTG 2 cut(s) 1310, 1452
Ama87I CYCGRG 1 cut(s) 574
AoxI GGCC 5 cut(s) 445, 519, 541, 1395, 1635
ApeKI GCWGC 5 cut(s) 120, 259, 310, 994, 1452
ApoI RAATTY 5 cut(s) 793, 884, 1133, 1193, 1290
ArsI GACNNNNNNTTYG 2 cut(s) 1715, 1747
Asp700I GAANNNNTTC 1 cut(s) 907
AspLEI GCGC 2 cut(s) 35, 1382
AspS9I GGNCC 6 cut(s) 519, 541, 571, 762, 1413, 1706
AsuC2I CCSGG 5 cut(s) 575, 576, 1074, 1561, 1704
AsuHPI GGTGA 5 cut(s) 331, 452, 590, 1132, 1609
AvaI CYCGRG 1 cut(s) 574
AvaII GGWCC 4 cut(s) 571, 762, 1413, 1706
AxyI CCTNAGG 1 cut(s) 1152
BaeGI GKGCMC 2 cut(s) 483, 1617
BamHI GGATCC 1 cut(s) 232
BanI GGYRCC 3 cut(s) 478, 1069, 1614
BanII GRGCYC 4 cut(s) 20, 656, 983, 1356
BarI GAAGNNNNNNTAC 2 cut(s) 942, 974
BbsI GAAGAC 1 cut(s) 1428
Bbv12I GWGCWC 3 cut(s) 20, 983, 1022
BbvI GCAGC 5 cut(s) 107, 271, 297, 1006, 1439
BccI CCATC 7 cut(s) 38, 135, 321, 414, 437, 499, 1561
BceAI ACGGC 2 cut(s) 20, 1417
BciT130I CCWGG 1 cut(s) 237
BclI TGATCA 1 cut(s) 399
BcnI CCSGG 5 cut(s) 575, 576, 1074, 1561, 1704
BcoDI GTCTC 2 cut(s) 962, 1550
BfaI CTAG 6 cut(s) 30, 269, 345, 660, 750, 891
BfoI RGCGCY 2 cut(s) 36, 1383
BglII AGATCT 2 cut(s) 1676, 1716
BisI GCNGC 6 cut(s) 121, 260, 263, 311, 995, 1453
BlsI GCNGC 6 cut(s) 122, 261, 264, 312, 996, 1454
Bme1390I CCNGG 6 cut(s) 237, 575, 576, 1074, 1561, 1704
Bme18I GGWCC 4 cut(s) 571, 762, 1413, 1706
BmeT110I CYCGRG 1 cut(s) 574
BmgT120I GGNCC 6 cut(s) 519, 541, 571, 762, 1413, 1706
BmiI GGNNCC 9 cut(s) 234, 480, 572, 573, 1071, 1353, 1414, 1616, 1707
BmrFI CCNGG 6 cut(s) 237, 575, 576, 1074, 1561, 1704
BmsI GCATC 4 cut(s) 312, 603, 1156, 1374
BpiI GAAGAC 1 cut(s) 1428
BplI GAGNNNNNCTC 2 cut(s) 1007, 1039
BpmI CTGGAG 1 cut(s) 1056
BpuEI CTTGAG 4 cut(s) 77, 804, 878, 1607
BpuMI CCSGG 5 cut(s) 575, 576, 1074, 1561, 1704
BsaHI GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
BsaI GGTCTC 1 cut(s) 1550
BsaJI CCNNGG 4 cut(s) 554, 574, 605, 1398
BsaXI ACNNNNNCTCC 4 cut(s) 91, 121, 448, 478
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 116, 279, 555, 738, 1735, 1800
Bse118I RCCGGY 3 cut(s) 272, 447, 1296
Bse1I ACTGG 4 cut(s) 1039, 1390, 1446, 1456
Bse21I CCTNAGG 1 cut(s) 1152
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 4 cut(s) 554, 574, 605, 1398
BseGI GGATG 5 cut(s) 132, 425, 615, 1147, 1740
BseLI CCNNNNNNNGG 7 cut(s) 60, 116, 279, 555, 738, 1735, 1800
BseMII CTCAG 2 cut(s) 1143, 1632
BseNI ACTGG 4 cut(s) 1039, 1390, 1446, 1456
BseRI GAGGAG 2 cut(s) 1012, 1280
BseSI GKGCMC 2 cut(s) 483, 1617
BseXI GCAGC 5 cut(s) 107, 271, 297, 1006, 1439
BseYI CCCAGC 5 cut(s) 378, 510, 516, 538, 738
BsgI GTGCAG 1 cut(s) 278
Bsh1285I CGRYCG 1 cut(s) 1301
BshFI GGCC 5 cut(s) 447, 521, 543, 1397, 1637
BshNI GGYRCC 3 cut(s) 478, 1069, 1614
BsiEI CGRYCG 1 cut(s) 1301
BsiHKAI GWGCWC 3 cut(s) 20, 983, 1022
BsiHKCI CYCGRG 1 cut(s) 574
BsiWI CGTACG 1 cut(s) 98
BslFI GGGAC 5 cut(s) 36, 584, 714, 1089, 1426
BslI CCNNNNNNNGG 7 cut(s) 60, 116, 279, 555, 738, 1735, 1800
BsmAI GTCTC 2 cut(s) 962, 1550
BsmBI CGTCTC 1 cut(s) 962
BsmFI GGGAC 5 cut(s) 36, 584, 714, 1089, 1426
BsnI GGCC 5 cut(s) 447, 521, 543, 1397, 1637
Bso31I GGTCTC 1 cut(s) 1550
BsoBI CYCGRG 1 cut(s) 574
Bsp1286I GDGCHC 7 cut(s) 20, 483, 656, 983, 1022, 1356, 1617
Bsp1407I TGTACA 1 cut(s) 928
Bsp19I CCATGG 1 cut(s) 554
BspACI CCGC 6 cut(s) 89, 240, 263, 765, 1011, 1026
BspANI GGCC 5 cut(s) 447, 521, 543, 1397, 1637
BspCNI CTCAG 2 cut(s) 1144, 1633
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 9 cut(s) 234, 480, 572, 573, 1071, 1353, 1414, 1616, 1707
BspPI GGATC 4 cut(s) 177, 227, 240, 572
BspQI GCTCTTC 1 cut(s) 1355
BspT107I GGYRCC 3 cut(s) 478, 1069, 1614
BspTNI GGTCTC 1 cut(s) 1550
BsrBI CCGCTC 2 cut(s) 91, 265
BsrFI RCCGGY 3 cut(s) 272, 447, 1296
BsrGI TGTACA 1 cut(s) 928
BsrI ACTGG 4 cut(s) 1039, 1390, 1446, 1456
BssAI RCCGGY 3 cut(s) 272, 447, 1296
BssECI CCNNGG 4 cut(s) 554, 574, 605, 1398
BssNI GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
BssT1I CCWWGG 2 cut(s) 554, 605
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 4 cut(s) 371, 1312, 1376, 1429
Bst6I CTCTTC 1 cut(s) 1355
BstACI GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
BstAUI TGTACA 1 cut(s) 928
BstC8I GCNNGC 5 cut(s) 274, 308, 712, 722, 780
BstDEI CTNAG 3 cut(s) 1079, 1152, 1641
BstDSI CCRYGG 1 cut(s) 554
BstF5I GGATG 5 cut(s) 132, 425, 615, 1147, 1740
BstH2I RGCGCY 2 cut(s) 36, 1383
BstHHI GCGC 2 cut(s) 35, 1382
BstMAI GTCTC 2 cut(s) 962, 1550
BstMCI CGRYCG 1 cut(s) 1301
BstMWI GCNNNNNNNGC 6 cut(s) 70, 120, 478, 788, 1017, 1580
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 1 cut(s) 782
BstSCI CCNGG 6 cut(s) 235, 573, 574, 1072, 1559, 1702
BstSLI GKGCMC 2 cut(s) 483, 1617
BstV1I GCAGC 5 cut(s) 107, 271, 297, 1006, 1439
BstV2I GAAGAC 1 cut(s) 1428
BstX2I RGATCY 5 cut(s) 169, 232, 564, 1676, 1716
BstXI CCANNNNNNTGG 2 cut(s) 561, 1181
BstYI RGATCY 5 cut(s) 169, 232, 564, 1676, 1716
Bsu36I CCTNAGG 1 cut(s) 1152
BsuRI GGCC 5 cut(s) 447, 521, 543, 1397, 1637
BtgI CCRYGG 1 cut(s) 554
BtgZI GCGATG 1 cut(s) 340
BtsCI GGATG 5 cut(s) 132, 425, 615, 1147, 1740
BtsI GCAGTG 1 cut(s) 731
BtsIMutI CAGTG 3 cut(s) 731, 1453, 1638
Cac8I GCNNGC 5 cut(s) 274, 308, 712, 722, 780
CaiI CAGNNNCTG 2 cut(s) 1310, 1452
CciI TCATGA 1 cut(s) 826
CfoI GCGC 2 cut(s) 35, 1382
Cfr10I RCCGGY 3 cut(s) 272, 447, 1296
Cfr13I GGNCC 6 cut(s) 519, 541, 571, 762, 1413, 1706
Cfr9I CCCGGG 1 cut(s) 574
CseI GACGC 6 cut(s) 38, 74, 320, 533, 1108, 1520
Csp6I GTAC 6 cut(s) 99, 243, 699, 929, 953, 1092
CviAII CATG 6 cut(s) 403, 555, 689, 779, 827, 1502
CviQI GTAC 6 cut(s) 99, 243, 699, 929, 953, 1092
DdeI CTNAG 3 cut(s) 1079, 1152, 1641
DrdI GACNNNNNNGTC 1 cut(s) 1432
DseDI GACNNNNNNGTC 1 cut(s) 1432
EaeI YGGCCR 1 cut(s) 445
Eam1104I CTCTTC 1 cut(s) 1355
EarI CTCTTC 1 cut(s) 1355
EciI GGCGGA 2 cut(s) 1015, 1026
Ecl136II GAGCTC 2 cut(s) 18, 981
Eco130I CCWWGG 2 cut(s) 554, 605
Eco24I GRGCYC 4 cut(s) 20, 656, 983, 1356
Eco31I GGTCTC 1 cut(s) 1550
Eco32I GATATC 1 cut(s) 338
Eco47I GGWCC 4 cut(s) 571, 762, 1413, 1706
Eco53kI GAGCTC 2 cut(s) 18, 981
Eco81I CCTNAGG 1 cut(s) 1152
Eco88I CYCGRG 1 cut(s) 574
EcoICRI GAGCTC 2 cut(s) 18, 981
EcoO109I RGGNCCY 1 cut(s) 571
EcoRI GAATTC 2 cut(s) 1133, 1193
EcoRII CCWGG 1 cut(s) 235
EcoRV GATATC 1 cut(s) 338
EcoT14I CCWWGG 2 cut(s) 554, 605
EcoT38I GRGCYC 4 cut(s) 20, 656, 983, 1356
ErhI CCWWGG 2 cut(s) 554, 605
Esp3I CGTCTC 1 cut(s) 962
FaeI CATG 6 cut(s) 406, 558, 692, 782, 830, 1505
FaqI GGGAC 5 cut(s) 36, 584, 714, 1089, 1426
FatI CATG 6 cut(s) 402, 554, 688, 778, 826, 1501
FauNDI CATATG 2 cut(s) 534, 1711
FbaI TGATCA 1 cut(s) 399
FblI GTMKAC 1 cut(s) 810
Fnu4HI GCNGC 6 cut(s) 121, 260, 263, 311, 995, 1453
FokI GGATG 5 cut(s) 119, 432, 622, 1134, 1727
FriOI GRGCYC 4 cut(s) 20, 656, 983, 1356
Fsp4HI GCNGC 6 cut(s) 121, 260, 263, 311, 995, 1453
FspBI CTAG 6 cut(s) 30, 269, 345, 660, 750, 891
GlaI GCGC 2 cut(s) 34, 1381
GluI GCNGC 6 cut(s) 121, 260, 263, 311, 995, 1453
GsaI CCCAGC 5 cut(s) 382, 514, 520, 542, 742
GsuI CTGGAG 1 cut(s) 1056
HaeII RGCGCY 2 cut(s) 36, 1383
HaeIII GGCC 5 cut(s) 447, 521, 543, 1397, 1637
HgaI GACGC 6 cut(s) 38, 74, 320, 533, 1108, 1520
HhaI GCGC 2 cut(s) 35, 1382
Hin1I GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
Hin1II CATG 6 cut(s) 406, 558, 692, 782, 830, 1505
Hin6I GCGC 2 cut(s) 33, 1380
HinP1I GCGC 2 cut(s) 33, 1380
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HinfI GANTC 5 cut(s) 581, 663, 746, 1209, 1463
HphI GGTGA 5 cut(s) 331, 452, 590, 1132, 1609
Hpy166II GTNNAC 2 cut(s) 300, 811
Hpy188I TCNGA 9 cut(s) 174, 249, 799, 913, 1214, 1306, 1370, 1462, 1723
Hpy188III TCNNGA 9 cut(s) 220, 502, 562, 660, 827, 857, 1151, 1165, 1330
Hpy8I GTNNAC 2 cut(s) 300, 811
Hpy99I CGWCG 9 cut(s) 41, 44, 163, 336, 527, 976, 1102, 1444, 1471
HpyCH4III ACNGT 4 cut(s) 371, 1312, 1376, 1429
HpyCH4IV ACGT 2 cut(s) 971, 1316
HpyCH4V TGCA 8 cut(s) 123, 259, 367, 427, 778, 791, 1629, 1770
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 120, 478, 788, 1017, 1580
HpyF3I CTNAG 3 cut(s) 1079, 1152, 1641
HpySE526I ACGT 2 cut(s) 971, 1316
Hsp92I GRCGYC 5 cut(s) 49, 331, 525, 971, 1512
Hsp92II CATG 6 cut(s) 406, 558, 692, 782, 830, 1505
HspAI GCGC 2 cut(s) 33, 1380
KflI GGGWCCC 1 cut(s) 571
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 399
LguI GCTCTTC 1 cut(s) 1355
LmnI GCTCC 7 cut(s) 270, 456, 991, 1025, 1114, 1224, 1351
Lsp1109I GCAGC 5 cut(s) 107, 271, 297, 1006, 1439
LweI GCATC 4 cut(s) 312, 603, 1156, 1374
MaeI CTAG 6 cut(s) 30, 269, 345, 660, 750, 891
MaeII ACGT 2 cut(s) 971, 1316
MaeIII GTNAC 3 cut(s) 600, 1280, 1312
MbiI CCGCTC 2 cut(s) 91, 265
MboII GAAGA 8 cut(s) 143, 950, 1016, 1345, 1372, 1428, 1489, 1588
MfeI CAATTG 3 cut(s) 705, 938, 1619
MflI RGATCY 5 cut(s) 169, 232, 564, 1676, 1716
MhlI GDGCHC 7 cut(s) 20, 483, 656, 983, 1022, 1356, 1617
MlyI GAGTC 3 cut(s) 755, 1203, 1457
MmeI TCCRAC 5 cut(s) 179, 969, 1237, 1485, 1746
MroNI GCCGGC 1 cut(s) 272
MroXI GAANNNNTTC 1 cut(s) 907
MslI CAYNNNNRTG 5 cut(s) 372, 533, 831, 1166, 1493
MspA1I CMGCKG 1 cut(s) 767
MspR9I CCNGG 6 cut(s) 237, 575, 576, 1074, 1561, 1704
MunI CAATTG 3 cut(s) 705, 938, 1619
MvaI CCWGG 1 cut(s) 237
MwoI GCNNNNNNNGC 6 cut(s) 70, 120, 478, 788, 1017, 1580
NaeI GCCGGC 1 cut(s) 274
NciI CCSGG 5 cut(s) 575, 576, 1074, 1561, 1704
NcoI CCATGG 1 cut(s) 554
NdeI CATATG 2 cut(s) 534, 1711
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 6 cut(s) 406, 558, 692, 782, 830, 1505
NlaIV GGNNCC 9 cut(s) 234, 480, 572, 573, 1071, 1353, 1414, 1616, 1707
NmuCI GTSAC 1 cut(s) 1280
NspI RCATGY 1 cut(s) 782
OliI CACNNNNGTG 1 cut(s) 372
PaeI GCATGC 1 cut(s) 782
PagI TCATGA 1 cut(s) 826
PciSI GCTCTTC 1 cut(s) 1355
PcsI WCGNNNNNNNCGW 1 cut(s) 1094
PdiI GCCGGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 907
PfeI GAWTC 2 cut(s) 581, 663
Pfl23II CGTACG 1 cut(s) 98
PkrI GCNGC 6 cut(s) 122, 261, 264, 312, 996, 1454
PleI GAGTC 3 cut(s) 754, 1203, 1457
PpsI GAGTC 3 cut(s) 754, 1203, 1457
PpuMI RGGWCCY 1 cut(s) 571
Psp124BI GAGCTC 2 cut(s) 20, 983
Psp1406I AACGTT 1 cut(s) 1316
Psp5II RGGWCCY 1 cut(s) 571
Psp6I CCWGG 1 cut(s) 235
PspFI CCCAGC 5 cut(s) 378, 510, 516, 538, 738
PspGI CCWGG 1 cut(s) 235
PspLI CGTACG 1 cut(s) 98
PspN4I GGNNCC 9 cut(s) 234, 480, 572, 573, 1071, 1353, 1414, 1616, 1707
PspPI GGNCC 6 cut(s) 519, 541, 571, 762, 1413, 1706
PspPPI RGGWCCY 1 cut(s) 571
PstNI CAGNNNCTG 2 cut(s) 1310, 1452
PsuI RGATCY 5 cut(s) 169, 232, 564, 1676, 1716
RsaI GTAC 6 cut(s) 100, 244, 700, 930, 954, 1093
RsaNI GTAC 6 cut(s) 99, 243, 699, 929, 953, 1092
RseI CAYNNNNRTG 5 cut(s) 372, 533, 831, 1166, 1493
SacI GAGCTC 2 cut(s) 20, 983
SapI GCTCTTC 1 cut(s) 1355
SatI GCNGC 6 cut(s) 121, 260, 263, 311, 995, 1453
Sau96I GGNCC 6 cut(s) 519, 541, 571, 762, 1413, 1706
SchI GAGTC 3 cut(s) 755, 1203, 1457
ScrFI CCNGG 6 cut(s) 237, 575, 576, 1074, 1561, 1704
SduI GDGCHC 7 cut(s) 20, 483, 656, 983, 1022, 1356, 1617
SfaNI GCATC 4 cut(s) 312, 603, 1156, 1374
SinI GGWCC 4 cut(s) 571, 762, 1413, 1706
SmaI CCCGGG 1 cut(s) 576
SmiMI CAYNNNNRTG 5 cut(s) 372, 533, 831, 1166, 1493
SmlI CTYRAG 4 cut(s) 92, 819, 857, 1586
SmoI CTYRAG 4 cut(s) 92, 819, 857, 1586
SphI GCATGC 1 cut(s) 782
SsiI CCGC 6 cut(s) 89, 240, 263, 765, 1011, 1026
SspMI CTAG 6 cut(s) 30, 269, 345, 660, 750, 891
SstI GAGCTC 2 cut(s) 20, 983
StyD4I CCNGG 6 cut(s) 235, 573, 574, 1072, 1559, 1702
StyI CCWWGG 2 cut(s) 554, 605
TaaI ACNGT 4 cut(s) 371, 1312, 1376, 1429
TaiI ACGT 2 cut(s) 974, 1319
TaqI TCGA 7 cut(s) 42, 139, 334, 744, 1207, 1329, 1466
TaqII GACCGA 1 cut(s) 285
TatI WGTACW 2 cut(s) 928, 952
TauI GCSGC 1 cut(s) 265
TfiI GAWTC 2 cut(s) 581, 663
TscAI CASTG 3 cut(s) 731, 1453, 1645
TseFI GTSAC 1 cut(s) 1280
TseI GCWGC 5 cut(s) 120, 259, 310, 994, 1452
Tsp45I GTSAC 1 cut(s) 1280
TspDTI ATGAA 3 cut(s) 121, 1150, 1744
TspMI CCCGGG 1 cut(s) 574
TspRI CASTG 3 cut(s) 731, 1453, 1645
VpaK11BI GGWCC 4 cut(s) 571, 762, 1413, 1706
XapI RAATTY 5 cut(s) 793, 884, 1133, 1193, 1290
XbaI TCTAGA 1 cut(s) 659
XceI RCATGY 1 cut(s) 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 535
XmaI CCCGGG 1 cut(s) 574
XmiI GTMKAC 1 cut(s) 810
XmnI GAANNNNTTC 1 cut(s) 907
XspI CTAG 6 cut(s) 30, 269, 345, 660, 750, 891
ZraI GACGTC 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.