Rh7DG366000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
49181002 .. 49181491
490 bp
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UTR
Exon/CDS
Intron
Rh7DG366000.1

Sequence Viewer

Length: 180 bp
ATGCCTCCATCCATATCTACCGCAACGAAGTCTTCCGGGAAGTCGGCAATGCTTTCCTCCTCTCCGGCGGCAGCGAAGGCATCTCCGCCTCTCCCTCCTCCCGCTCTTTTATCCGATTCGAGAATATCACCTTCTGAAGGAGCTCGGCTGCTGTTGACAAGAAGCATAGTAATGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

5.88

Weight (kDa)

11.0

Isoelectric Point (pI)

91.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 104
AciI CCGC 4 cut(s) 21, 68, 86, 102
AcuI CTGAAG 1 cut(s) 156
AfiI CCNNNNNNNGG 1 cut(s) 137
AluBI AGCT 1 cut(s) 143
AluI AGCT 1 cut(s) 143
Alw21I GWGCWC 1 cut(s) 145
ApeKI GCWGC 2 cut(s) 71, 148
AsuC2I CCSGG 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 120
BanII GRGCYC 1 cut(s) 145
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 145
BbvI GCAGC 2 cut(s) 83, 135
BccI CCATC 1 cut(s) 16
BcnI CCSGG 1 cut(s) 37
BisI GCNGC 3 cut(s) 69, 72, 149
BlsI GCNGC 3 cut(s) 70, 73, 150
Bme1390I CCNGG 1 cut(s) 37
BmrFI CCNGG 1 cut(s) 37
BmsI GCATC 1 cut(s) 89
BpiI GAAGAC 1 cut(s) 24
BpuMI CCSGG 1 cut(s) 37
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse3DI GCAATG 1 cut(s) 54
BseGI GGATG 1 cut(s) 8
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMI GCAATG 1 cut(s) 54
BseRI GAGGAG 2 cut(s) 49, 87
BseXI GCAGC 2 cut(s) 83, 135
BsiHKAI GWGCWC 1 cut(s) 145
BsiSI CCGG 2 cut(s) 36, 65
BslI CCNNNNNNNGG 1 cut(s) 137
Bsp1286I GDGCHC 1 cut(s) 145
BspACI CCGC 4 cut(s) 21, 68, 86, 102
BsrBI CCGCTC 1 cut(s) 104
BsrDI GCAATG 1 cut(s) 54
BstENI CCTNNNNNAGG 1 cut(s) 135
BstF5I GGATG 1 cut(s) 8
BstMWI GCNNNNNNNGC 1 cut(s) 77
BstSCI CCNGG 1 cut(s) 35
BstV1I GCAGC 2 cut(s) 83, 135
BstV2I GAAGAC 1 cut(s) 24
BtsCI GGATG 1 cut(s) 8
CviJI RGCY 2 cut(s) 143, 148
CviKI_1 RGCY 2 cut(s) 143, 148
EciI GGCGGA 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 145
Eco53kI GAGCTC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 156
EcoICRI GAGCTC 1 cut(s) 143
EcoNI CCTNNNNNAGG 1 cut(s) 135
EcoT38I GRGCYC 1 cut(s) 145
FaiI YATR 2 cut(s) 14, 167
FauI CCCGC 1 cut(s) 109
Fnu4HI GCNGC 3 cut(s) 69, 72, 149
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 3 cut(s) 69, 72, 149
GluI GCNGC 3 cut(s) 69, 72, 149
HapII CCGG 2 cut(s) 36, 65
HincII GTYRAC 1 cut(s) 156
HindII GTYRAC 1 cut(s) 156
HinfI GANTC 1 cut(s) 116
HpaII CCGG 2 cut(s) 36, 65
HphI GGTGA 1 cut(s) 120
Hpy166II GTNNAC 1 cut(s) 156
Hpy188I TCNGA 2 cut(s) 115, 136
Hpy188III TCNNGA 1 cut(s) 120
Hpy8I GTNNAC 1 cut(s) 156
HpyAV CCTTC 3 cut(s) 70, 131, 141
HpyF10VI GCNNNNNNNGC 1 cut(s) 77
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 2 cut(s) 49, 78
Lsp1109I GCAGC 2 cut(s) 83, 135
LweI GCATC 1 cut(s) 89
MbiI CCGCTC 1 cut(s) 104
MboII GAAGA 1 cut(s) 24
MhlI GDGCHC 1 cut(s) 145
MnlI CCTC 6 cut(s) 15, 67, 70, 99, 105, 108
MslI CAYNNNNRTG 1 cut(s) 170
MspI CCGG 2 cut(s) 36, 65
MspR9I CCNGG 1 cut(s) 37
MwoI GCNNNNNNNGC 1 cut(s) 77
NciI CCSGG 1 cut(s) 37
NmeAIII GCCGAG 1 cut(s) 124
PfeI GAWTC 1 cut(s) 116
PfoI TCCNGGA 1 cut(s) 35
PkrI GCNGC 3 cut(s) 70, 73, 150
Psp124BI GAGCTC 1 cut(s) 145
RseI CAYNNNNRTG 1 cut(s) 170
SacI GAGCTC 1 cut(s) 145
SatI GCNGC 3 cut(s) 69, 72, 149
ScrFI CCNGG 1 cut(s) 37
SduI GDGCHC 1 cut(s) 145
SetI ASST 2 cut(s) 133, 145
SfaNI GCATC 1 cut(s) 89
SgeI CNNG 7 cut(s) 48, 49, 77, 113, 132, 156, 171
SmiMI CAYNNNNRTG 1 cut(s) 170
SsiI CCGC 4 cut(s) 21, 68, 86, 102
SstI GAGCTC 1 cut(s) 145
StyD4I CCNGG 1 cut(s) 35
TaqI TCGA 1 cut(s) 119
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 1 cut(s) 116
TseI GCWGC 2 cut(s) 71, 148
XagI CCTNNNNNAGG 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.