Rmu_sc0003600.1_g000001

ribosomal protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003600.1
Physical Location & Seq
Reverse (-)
1 .. 751
751 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003600.1_g000001.1.cds

Sequence Viewer

Length: 203 bp
atgaacgccgtcgagcaggtgatggaggtgatgcacgcgccgtatctcgttgtgaacatggagttagagcacattctgcgtgttctgaacaccaatgtgaatggaaatcagaagatcatgttcgctctgacctccatcaagggaatcggtcgccatttagccaacatcgtctgcaagaagaccaacgttgacatgaacaagag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.58

Weight (kDa)

8.98

Isoelectric Point (pI)

28.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 7
Acc36I ACCTGC 1 cut(s) 7
AccII CGCG 1 cut(s) 38
AclI AACGTT 1 cut(s) 186
AleI CACNNNNGTG 1 cut(s) 95
Alw21I GWGCWC 1 cut(s) 72
AspLEI GCGC 1 cut(s) 40
AsuHPI GGTGA 2 cut(s) 31, 40
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 72
BccI CCATC 2 cut(s) 16, 143
BceAI ACGGC 1 cut(s) 25
BfuAI ACCTGC 1 cut(s) 7
BmsI GCATC 1 cut(s) 21
BpiI GAAGAC 1 cut(s) 185
Bsh1236I CGCG 1 cut(s) 38
Bsh1285I CGRYCG 1 cut(s) 151
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 1 cut(s) 72
Bsp1286I GDGCHC 1 cut(s) 72
Bsp143I GATC 1 cut(s) 114
BspFNI CGCG 1 cut(s) 38
BspMI ACCTGC 1 cut(s) 7
BssMI GATC 1 cut(s) 114
BstAPI GCANNNNNTGC 1 cut(s) 76
BstC8I GCNNGC 1 cut(s) 36
BstFNI CGCG 1 cut(s) 38
BstHHI GCGC 1 cut(s) 40
BstKTI GATC 1 cut(s) 117
BstMBI GATC 1 cut(s) 114
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstUI CGCG 1 cut(s) 38
BstV2I GAAGAC 1 cut(s) 185
BveI ACCTGC 1 cut(s) 7
Cac8I GCNNGC 1 cut(s) 36
CfoI GCGC 1 cut(s) 40
CviAII CATG 3 cut(s) 58, 118, 193
CviJI RGCY 1 cut(s) 161
CviKI_1 RGCY 1 cut(s) 161
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
FaeI CATG 3 cut(s) 61, 121, 196
FaiI YATR 3 cut(s) 59, 119, 194
FatI CATG 3 cut(s) 57, 117, 192
GlaI GCGC 1 cut(s) 39
HhaI GCGC 1 cut(s) 40
Hin1II CATG 3 cut(s) 61, 121, 196
Hin6I GCGC 1 cut(s) 38
HinP1I GCGC 1 cut(s) 38
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HinfI GANTC 1 cut(s) 144
HphI GGTGA 2 cut(s) 31, 40
Hpy166II GTNNAC 2 cut(s) 55, 190
Hpy188I TCNGA 3 cut(s) 87, 111, 129
Hpy8I GTNNAC 2 cut(s) 55, 190
Hpy99I CGWCG 1 cut(s) 14
HpyCH4IV ACGT 1 cut(s) 186
HpyCH4V TGCA 2 cut(s) 34, 174
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpySE526I ACGT 1 cut(s) 186
Hsp92II CATG 3 cut(s) 61, 121, 196
HspAI GCGC 1 cut(s) 38
Kzo9I GATC 1 cut(s) 114
LpnPI CCDG 1 cut(s) 2
LweI GCATC 1 cut(s) 21
MaeII ACGT 1 cut(s) 186
MalI GATC 1 cut(s) 116
MboI GATC 1 cut(s) 114
MboII GAAGA 2 cut(s) 124, 190
MhlI GDGCHC 1 cut(s) 72
MnlI CCTC 2 cut(s) 19, 142
MslI CAYNNNNRTG 1 cut(s) 95
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 1 cut(s) 76
NdeII GATC 1 cut(s) 114
NlaIII CATG 3 cut(s) 61, 121, 196
OliI CACNNNNGTG 1 cut(s) 95
PaqCI CACCTGC 1 cut(s) 7
PfeI GAWTC 1 cut(s) 144
Psp1406I AACGTT 1 cut(s) 186
RseI CAYNNNNRTG 1 cut(s) 95
Sau3AI GATC 1 cut(s) 114
SduI GDGCHC 1 cut(s) 72
SetI ASST 4 cut(s) 21, 30, 134, 189
SfaNI GCATC 1 cut(s) 21
SmiMI CAYNNNNRTG 1 cut(s) 95
TaiI ACGT 1 cut(s) 189
TaqI TCGA 1 cut(s) 12
TaqII GACCGA 1 cut(s) 137
TfiI GAWTC 1 cut(s) 144
TspDTI ATGAA 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.