Rmu_ssc0000029.1_g000007

Belongs to the eukaryotic ribosomal protein P1 P2 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000029.1
Physical Location & Seq
Reverse (-)
38597 .. 39380
784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000029.1_g000007.1.cds

Sequence Viewer

Length: 201 bp
atgaatgtgatcgctgcttatttgctcgctgtgttggggggcaagaccagaaccgaagacatcaagagcatccttggcgccgttggtgctgaagtagatgatgacaggcttcagtttattctcaaggaagttcagggtaaggacataacagagcttattgcctctggaagggagacgttggcttctatattgagattatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

66

Amino Acids

7.11

Weight (kDa)

4.89

Isoelectric Point (pI)

23.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 77
AcuI CTGAAG 2 cut(s) 95, 111
AcyI GRCGYC 1 cut(s) 78
AfiI CCNNNNNNNGG 1 cut(s) 168
AluBI AGCT 1 cut(s) 154
AluI AGCT 1 cut(s) 154
Alw26I GTCTC 1 cut(s) 167
ApeKI GCWGC 1 cut(s) 14
AspLEI GCGC 1 cut(s) 80
BanI GGYRCC 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 63
BceAI ACGGC 1 cut(s) 65
BcoDI GTCTC 1 cut(s) 167
BfoI RGCGCY 1 cut(s) 81
BisI GCNGC 1 cut(s) 15
BlsI GCNGC 1 cut(s) 16
BmiI GGNNCC 1 cut(s) 79
BmsI GCATC 1 cut(s) 78
BpiI GAAGAC 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 78
BsaJI CCNNGG 1 cut(s) 73
Bsc4I CCNNNNNNNGG 1 cut(s) 168
BseDI CCNNGG 1 cut(s) 73
BseGI GGATG 1 cut(s) 69
BseLI CCNNNNNNNGG 1 cut(s) 168
BshNI GGYRCC 1 cut(s) 77
BslI CCNNNNNNNGG 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 167
BsmBI CGTCTC 1 cut(s) 167
Bsp143I GATC 1 cut(s) 9
BspLI GGNNCC 1 cut(s) 79
BspT107I GGYRCC 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 73
BssMI GATC 1 cut(s) 9
BssNI GRCGYC 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 73
BstACI GRCGYC 1 cut(s) 78
BstC8I GCNNGC 1 cut(s) 27
BstENI CCTNNNNNAGG 1 cut(s) 166
BstF5I GGATG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 81
BstHHI GCGC 1 cut(s) 80
BstKTI GATC 1 cut(s) 12
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 1 cut(s) 9
BstMWI GCNNNNNNNGC 2 cut(s) 75, 86
BstV2I GAAGAC 1 cut(s) 63
BtsCI GGATG 1 cut(s) 69
Cac8I GCNNGC 1 cut(s) 27
CfoI GCGC 1 cut(s) 80
CviJI RGCY 3 cut(s) 109, 154, 182
CviKI_1 RGCY 3 cut(s) 109, 154, 182
DinI GGCGCC 1 cut(s) 79
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 73
Eco57I CTGAAG 2 cut(s) 95, 111
EcoNI CCTNNNNNAGG 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 73
EgeI GGCGCC 1 cut(s) 79
EheI GGCGCC 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 73
Esp3I CGTCTC 1 cut(s) 167
FaiI YATR 3 cut(s) 146, 188, 199
Fnu4HI GCNGC 1 cut(s) 15
FokI GGATG 1 cut(s) 56
Fsp4HI GCNGC 1 cut(s) 15
GlaI GCGC 1 cut(s) 79
GluI GCNGC 1 cut(s) 15
HaeII RGCGCY 1 cut(s) 81
HhaI GCGC 1 cut(s) 80
Hin1I GRCGYC 1 cut(s) 78
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
Hpy188III TCNNGA 2 cut(s) 64, 165
HpyAV CCTTC 1 cut(s) 162
HpyCH4IV ACGT 1 cut(s) 176
HpyF10VI GCNNNNNNNGC 2 cut(s) 75, 86
HpySE526I ACGT 1 cut(s) 176
Hsp92I GRCGYC 1 cut(s) 78
HspAI GCGC 1 cut(s) 78
KasI GGCGCC 1 cut(s) 77
Kzo9I GATC 1 cut(s) 9
LpnPI CCDG 4 cut(s) 61, 91, 119, 150
LweI GCATC 1 cut(s) 78
MaeII ACGT 1 cut(s) 176
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MboII GAAGA 1 cut(s) 68
Mly113I GGCGCC 1 cut(s) 78
MnlI CCTC 1 cut(s) 172
MwoI GCNNNNNNNGC 2 cut(s) 75, 86
NarI GGCGCC 1 cut(s) 78
NdeII GATC 1 cut(s) 9
NlaIV GGNNCC 1 cut(s) 79
PkrI GCNGC 1 cut(s) 16
PluTI GGCGCC 1 cut(s) 81
PspN4I GGNNCC 1 cut(s) 79
SatI GCNGC 1 cut(s) 15
Sau3AI GATC 1 cut(s) 9
SetI ASST 2 cut(s) 156, 179
SfaNI GCATC 1 cut(s) 78
SfoI GGCGCC 1 cut(s) 79
SgeI CNNG 9 cut(s) 38, 55, 60, 76, 86, 118, 136, 146, 177
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SspDI GGCGCC 1 cut(s) 77
StyI CCWWGG 1 cut(s) 73
TaiI ACGT 1 cut(s) 179
TseI GCWGC 1 cut(s) 14
TspDTI ATGAA 1 cut(s) 17
XagI CCTNNNNNAGG 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.