Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001160

Physical Location & Seq

Genomic Coordinates Forward (+)

20609347 .. 20612096

Gene Structure 2750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0206500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGCAAATGATGAAACTCTCTTTGGCGATATTATTGGCAGCTGTAACAACAAGAGCAGCAGCTGATCAAGCCCTACCTGGTTGTGCAGAAAAGTGCGGTGATATAACAATCCCATATCCATTTGGGATAGGCGATGGCTGCTACCTGCGTCCAGAATTCAACATCAATTGTAATGGATCCACCACACCCACGTCAACAAACTTTGCAAACAGTACCTATACTTTTCCCATAGCCATAGCTAACTTTTCCATTTCTGAGGGTGAGTTGCAAGTCATGCAGGCCGTAGCCCTAGATTGTTATGACAACAAGGGTGTAAAGATAGCCAACAGCACAAGTACGCTGGAGCTGCCGCCTTCTTATACCATCTCTGCAAAAAACAAGTTCTTTCTCGTTGGCTGTAATAATGCAGCAGTTTATGAAGGTCTACTTCAGTTCCCAGACCCAGATGAAGGAAGTGGCTTCCAAGCAGTCGGGTTCACTGTGACCTTGTGTATAAATGCGCTTGGCAAAGAGTTGCAGGAGTCTTGTGACGGCTTTGGGTGTGCCCAAAATTCCATCCCTAGTGGACTCCAAAATATCACTGTGTCCTTGGAGGCACTTGATTCTGATAACCGAACAGATTCGTGGGACTTAAAGTACCTGTGCAGCTACGCATTCATTGTGGACGAAGGCAATTTCACATTCTCCCCGGAGAGTAGTTTCCAACAACTGGCTACTACAAGGAAGCTACTTCCAGTACTTATTAACTGGGCGATTGGGGATGAGCCATGTGAAGTAGCAAAGAAGAGCCACAGTACTTATGCATGCAAAGAAAATACCACCTGTGTTGACCGAAGTACCATCGCAAATGGTACGGTTGGTTACCTTTGCCACTGCTTGCCAGGTTACCATGGAAATCCGTACCTTGGTTGCAAAGATATCGATGAGTGCCAGGCTTCAACTAACCCCTGCCAGAATGGGAAGTGCATAAACTCGCCTCCAGGAAATTATTCTTGTCAATGTAACGGAGGGTACAAAAACAAAGATCCAAAAACTTGCGTTGAATATCCCAAAGAAAATAACACTTCCCTGAAAATTTCATCGGGTCTCATTGAAGGATTCTTGGTTTTAGTTGTTTCAATGTCATGGATATATTGGATAATGAACAAAAGAAGGCGCATCAAACTCAAAGAAAAGTATTTTAAAGAAAATGGCGGCTTAACATTACAGCAACAGCTAGCCACGCATGGAGGAGGAGTGGAGACAACAAAAATCTTTACGGCTGAAGAGCTTAAGAAGGCAACGAACAATTATAATGCAGGTGAAATTCTTGGTGAAGGAGGCTACGGGACAGTTTACAAAGGAATATTGCCTGATAAAAGAGTTGTAGCCATCAAAAAGTCAAAACTGGGTGCCCCAACTCAAAGTGATCAATTTGTCAATGAGGTGACTATTCTTTCTCAAATCAACCATAGAAACGTGGTAAAATTATTAGGTTGTTGTTTCGAGACCGAAGTGCCTTTACTAGTATACGAGTACATCACCGGTGGAACTCTTTCTGAGCATGTATTCAAGAAAAGACAAAGATCTGTGCTTTCATGGGAATTACGACTGAAGATAGCATCAGAAACGGCAGGGGCACTTGCATACTTGCACTCCTCTACTTCTACTCCAATCATACATCGAGACGTGAAATCAACGAATATATTATTGGATGACAATTACATGGCCAAAGTGTCAGATTTTGGAGCTTCACGTTTCATTCCTATAGATCAAACTCAAGTAGCAACACTAGTGCAAGGGACACTTGGATACTTGGACCCTGAATACTGCCAGTCAAACCAACTGACTGAAAAGAGTGATGTATATAGCTTTGGTGTTGTGCTAGCGGAGCTACTAACGAGGAAAGTGGCAGTTTCTTTTGCTAGGCCCGAGGAAGAGAGAAACCTAGCAAGTTTGTTTATTTCTTCAATGGAAAAAGAATGCTTGAATCAAATTCTTGATGCTGAAATTCTGAATGAGAGGAATATGGAGACAATACGGCAAGTGGCGAATCTGGCGAAAAGATGTTTGAGGATAAAAGGAGAGGAAAGGCCTTTGATGAAAGAAGTAGCTATGGAGTTGGAGGGGATGAGAATTGAGGCAAAACATCCATGGAAATGTGGTAGTTCCTGCTCTGATGAGGGGACTGAGTACCTGTTAGGGTCATCCAATTCGAAGACTAATGTTGCGGATACTAAAGGTGAAGGTGTTTCTAGTACTGGTACGACCAGCGAGTATGCCAGTATGCAAATTCAGATGTTAATGTCACATGAACATGGGCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0015934 GO:0022625 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_60s

Protein Analysis

768

Amino Acids

84.28

Weight (kDa)

5.61

Isoelectric Point (pI)

34.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	28 - 86	6.6e-10	Wall-associated receptor kinase galacturonan-binding
EGF_CA	PF07645	306 - 346	1.4e-06	Calcium-binding EGF domain
Pkinase	PF00069	431 - 697	6.8e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	434 - 701	1.6e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001160)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27710 AT2G27710 AT2G27710 AT2G27710 AT2G27720 AT2G27720 AT2G27720 AT2G27720 AT3G44590 AT3G44590
fragaria_vesca	FvH4_6g18210 FvH4_6g25270
malus_domestica	MD03G1138800.v1.1 MD09G1183400.v1.1 MD09G1269400.v1.1 MD10G1207100.v1.1 MD11G1160300.v1.1 MD12G1022000.v1.1 MD14G1018800.v1.1
prunus_persica	Prupe.6G123800_v2.0.a1 Prupe.7G114700_v2.0.a1
pyrus_communis	pycom15g39030
rosa_chinensis	RchiOBHm_Chr3g0472541 RchiOBHm_Chr4g0405631 RchiOBHm_Chr5g0002791 RchiOBHm_Chr5g0043421 RchiOBHm_Chr6g0283321
rosa_laevigata	RLG00000002104 RLG00000024071 RLG00000031060 RLG00000034186
rosa_multiflora	Rmu_sc0001200.1_g000055 Rmu_sc0003510.1_g000027 Rmu_sc0011581.1_g000006 Rmu_sc0013603.1_g000017 Rmu_sc0041617.1_g000001 Rmu_ssc0000029.1_g000007 Rmu_ssc0000067.1_g000066 Rmu_ssc0000341.1_g000007
rosa_roxburghii	Rroxscaffold_1G00037460 Rroxscaffold_1G00073050 Rroxscaffold_6G00408850 Rroxscaffold_6G00416420
rosa_rugosa	Rorug03G0126400 Rorug03G0126500 Rorug04G0399600 Rorug05G0205800 Rorug05G0205900 Rorug05G0206500
rosa_samantha	Rh2BG054600 Rh5BG298200
rosa_wichuraiana	Rw1G008940 Rw1G014200 Rw2G048840 Rw3G016340 Rw5G002090 Rw5G027050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1293
AarI	CACCTGC	1 cut(s)	1289
Acc36I	ACCTGC	2 cut(s)	153, 1289
AccB1I	GGYRCC	1 cut(s)	1391
AccB7I	CCANNNNNTGG	1 cut(s)	709
AccI	GTMKAC	2 cut(s)	424, 1509
AciI	CCGC	5 cut(s)	96, 350, 1194, 1868, 2210
AclWI	GGATC	3 cut(s)	171, 184, 1019
AcoI	YGGCCR	1 cut(s)	1707
AcsI	RAATTY	7 cut(s)	155, 550, 1074, 1305, 1974, 1989, 2271
AcuI	CTGAAG	3 cut(s)	413, 1284, 1613
AfiI	CCNNNNNNNGG	3 cut(s)	449, 709, 905
AflII	CTTAAG	1 cut(s)	1271
AgeI	ACCGGT	1 cut(s)	1523
AgsI	TTSAA	8 cut(s)	160, 939, 1043, 1094, 1119, 1552, 1950, 1969
AhlI	ACTAGT	2 cut(s)	1504, 1771
AjiI	CACGTC	2 cut(s)	192, 1669
AjnI	CCWGG	4 cut(s)	76, 880, 930, 979
AjuI	GAANNNNNNNTTGG	3 cut(s)	37, 1673, 1705
Alw26I	GTCTC	5 cut(s)	1091, 1235, 1481, 1659, 2006
AlwI	GGATC	3 cut(s)	171, 184, 1019
AlwNI	CAGNNNCTG	1 cut(s)	62
Ama87I	CYCGRG	1 cut(s)	1910
AoxI	GGCC	4 cut(s)	279, 1707, 1907, 2072
ApeKI	GCWGC	7 cut(s)	38, 56, 59, 138, 346, 407, 645
ApoI	RAATTY	7 cut(s)	155, 550, 1074, 1305, 1974, 1989, 2271
AsiGI	ACCGGT	1 cut(s)	1523
Asp700I	GAANNNNTTC	3 cut(s)	619, 988, 1534
AspLEI	GCGC	2 cut(s)	502, 1158
AspS9I	GGNCC	2 cut(s)	1798, 1908
AsuC2I	CCSGG	1 cut(s)	689
AsuHPI	GGTGA	7 cut(s)	110, 272, 1313, 1325, 1438, 1513, 2234
AsuII	TTCGAA	1 cut(s)	2195
AsuNHI	GCTAGC	2 cut(s)	1216, 1864
AvaI	CYCGRG	1 cut(s)	1910
AvaII	GGWCC	1 cut(s)	1798
BaeGI	GKGCMC	3 cut(s)	547, 1396, 1621
BaeI	ACNNNNGTAYC	2 cut(s)	820, 853
BalI	TGGCCA	1 cut(s)	1709
BamHI	GGATCC	1 cut(s)	176
BanI	GGYRCC	1 cut(s)	1391
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BbsI	GAAGAC	1 cut(s)	2204
BbvI	GCAGC	7 cut(s)	50, 68, 71, 125, 333, 419, 657
BccI	CCATC	5 cut(s)	128, 371, 563, 848, 1379
BceAI	ACGGC	5 cut(s)	266, 547, 1275, 1626, 2036
BcgI	CGANNNNNNTGC	2 cut(s)	901, 935
BciT130I	CCWGG	4 cut(s)	78, 882, 932, 981
BciVI	GTATCC	2 cut(s)	1784, 2206
BclI	TGATCA	2 cut(s)	64, 1408
BcnI	CCSGG	1 cut(s)	689
BcoDI	GTCTC	5 cut(s)	1091, 1235, 1481, 1659, 2006
BcuI	ACTAGT	2 cut(s)	1504, 1771
BfaI	CTAG	9 cut(s)	290, 561, 1217, 1505, 1772, 1865, 1905, 1928, 2235
BfmI	CTRYAG	1 cut(s)	1746
BfrI	CTTAAG	1 cut(s)	1271
BfuAI	ACCTGC	2 cut(s)	153, 1289
BfuI	GTATCC	2 cut(s)	1784, 2206
BglII	AGATCT	1 cut(s)	1565
BisI	GCNGC	9 cut(s)	39, 57, 60, 139, 347, 350, 408, 646, 1195
BlsI	GCNGC	9 cut(s)	40, 58, 61, 140, 348, 351, 409, 647, 1196
BmcAI	AGTACT	3 cut(s)	738, 796, 2239
Bme1390I	CCNGG	5 cut(s)	78, 689, 882, 932, 981
Bme18I	GGWCC	1 cut(s)	1798
BmeT110I	CYCGRG	1 cut(s)	1910
BmgBI	CACGTC	2 cut(s)	192, 1669
BmgT120I	GGNCC	2 cut(s)	1798, 1908
BmiI	GGNNCC	3 cut(s)	178, 1393, 1800
BmrFI	CCNGG	5 cut(s)	78, 689, 882, 932, 981
BmrI	ACTGGG	2 cut(s)	757, 1397
BmsI	GCATC	3 cut(s)	1167, 1610, 1972
BmtI	GCTAGC	2 cut(s)	1220, 1868
BmuI	ACTGGG	2 cut(s)	757, 1397
BpiI	GAAGAC	1 cut(s)	2204
BpmI	CTGGAG	2 cut(s)	362, 963
Bpu14I	TTCGAA	1 cut(s)	2195
BpuEI	CTTGAG	1 cut(s)	1743
BpuMI	CCSGG	1 cut(s)	689
Bsa29I	ATCGAT	1 cut(s)	921
BsaI	GGTCTC	2 cut(s)	1091, 1481
BsaJI	CCNNGG	6 cut(s)	588, 687, 889, 904, 1911, 2132
BsaWI	WCCGGW	1 cut(s)	1523
BsaXI	ACNNNNNCTCC	6 cut(s)	1221, 1251, 1619, 1633, 1649, 1663
Bsc4I	CCNNNNNNNGG	3 cut(s)	449, 709, 905
Bse118I	RCCGGY	1 cut(s)	1523
Bse1I	ACTGG	7 cut(s)	714, 734, 752, 1392, 1813, 2245, 2262
BseBI	CCWGG	4 cut(s)	78, 882, 932, 981
BseCI	ATCGAT	1 cut(s)	921
BseDI	CCNNGG	6 cut(s)	588, 687, 889, 904, 1911, 2132
BseGI	GGATG	6 cut(s)	555, 766, 1699, 2115, 2128, 2186
BseLI	CCNNNNNNNGG	3 cut(s)	449, 709, 905
BseMII	CTCAG	3 cut(s)	246, 1530, 2160
BseNI	ACTGG	7 cut(s)	714, 734, 752, 1392, 1813, 2245, 2262
BseRI	GAGGAG	3 cut(s)	1245, 1248, 1627
BseSI	GKGCMC	3 cut(s)	547, 1396, 1621
BseXI	GCAGC	7 cut(s)	50, 68, 71, 125, 333, 419, 657
BsgI	GTGCAG	2 cut(s)	105, 664
BshFI	GGCC	4 cut(s)	281, 1709, 1909, 2074
BshNI	GGYRCC	1 cut(s)	1391
BshTI	ACCGGT	1 cut(s)	1523
BshVI	ATCGAT	1 cut(s)	921
BsiHKCI	CYCGRG	1 cut(s)	1910
BsiSI	CCGG	2 cut(s)	689, 1524
BslFI	GGGAC	4 cut(s)	641, 1342, 1795, 2179
BslI	CCNNNNNNNGG	3 cut(s)	449, 709, 905
BsmAI	GTCTC	5 cut(s)	1091, 1235, 1481, 1659, 2006
BsmBI	CGTCTC	1 cut(s)	1659
BsmFI	GGGAC	4 cut(s)	641, 1342, 1795, 2179
BsmI	GAATGC	2 cut(s)	653, 1967
BsnI	GGCC	4 cut(s)	281, 1709, 1909, 2074
Bso31I	GGTCTC	2 cut(s)	1091, 1481
BsoBI	CYCGRG	1 cut(s)	1910
Bsp119I	TTCGAA	1 cut(s)	2195
Bsp1286I	GDGCHC	3 cut(s)	547, 1396, 1621
Bsp143I	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
Bsp19I	CCATGG	2 cut(s)	889, 2132
BspACI	CCGC	5 cut(s)	96, 350, 1194, 1868, 2210
BspANI	GGCC	4 cut(s)	281, 1709, 1909, 2074
BspCNI	CTCAG	3 cut(s)	247, 1531, 2161
BspDI	ATCGAT	1 cut(s)	921
BspLI	GGNNCC	3 cut(s)	178, 1393, 1800
BspMI	ACCTGC	2 cut(s)	153, 1289
BspOI	GCTAGC	2 cut(s)	1220, 1868
BspPI	GGATC	3 cut(s)	171, 184, 1019
BspQI	GCTCTTC	2 cut(s)	779, 1260
BspT104I	TTCGAA	1 cut(s)	2195
BspT107I	GGYRCC	1 cut(s)	1391
BspTI	CTTAAG	1 cut(s)	1271
BspTNI	GGTCTC	2 cut(s)	1091, 1481
BsrFI	RCCGGY	1 cut(s)	1523
BsrI	ACTGG	7 cut(s)	714, 734, 752, 1392, 1813, 2245, 2262
BssAI	RCCGGY	1 cut(s)	1523
BssECI	CCNNGG	6 cut(s)	588, 687, 889, 904, 1911, 2132
BssMI	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
BssNAI	GTATAC	1 cut(s)	1510
BssT1I	CCWWGG	4 cut(s)	588, 889, 904, 2132
Bst1107I	GTATAC	1 cut(s)	1510
Bst2UI	CCWGG	4 cut(s)	78, 882, 932, 981
Bst4CI	ACNGT	6 cut(s)	212, 481, 583, 794, 856, 1333
Bst6I	CTCTTC	3 cut(s)	779, 1260, 1911
BstAFI	CTTAAG	1 cut(s)	1271
BstAPI	GCANNNNNTGC	1 cut(s)	274
BstBI	TTCGAA	1 cut(s)	2195
BstC8I	GCNNGC	5 cut(s)	279, 805, 878, 1218, 1866
BstDEI	CTNAG	3 cut(s)	255, 1539, 2169
BstDSI	CCRYGG	2 cut(s)	889, 2132
BstEII	GGTNACC	2 cut(s)	860, 884
BstF5I	GGATG	6 cut(s)	555, 766, 1699, 2115, 2128, 2186
BstHHI	GCGC	2 cut(s)	502, 1158
BstKTI	GATC	6 cut(s)	67, 179, 1027, 1411, 1568, 1753
BstMAI	GTCTC	5 cut(s)	1091, 1235, 1481, 1659, 2006
BstMBI	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
BstMWI	GCNNNNNNNGC	7 cut(s)	68, 138, 274, 346, 1222, 1870, 2036
BstNI	CCWGG	4 cut(s)	78, 882, 932, 981
BstNSI	RCATGY	2 cut(s)	807, 1547
BstPI	GGTNACC	2 cut(s)	860, 884
BstSCI	CCNGG	5 cut(s)	76, 687, 880, 930, 979
BstSFI	CTRYAG	1 cut(s)	1746
BstSLI	GKGCMC	3 cut(s)	547, 1396, 1621
BstV1I	GCAGC	7 cut(s)	50, 68, 71, 125, 333, 419, 657
BstV2I	GAAGAC	1 cut(s)	2204
BstX2I	RGATCY	3 cut(s)	176, 1024, 1565
BstYI	RGATCY	3 cut(s)	176, 1024, 1565
BstZ17I	GTATAC	1 cut(s)	1510
Bsu15I	ATCGAT	1 cut(s)	921
BsuI	GTATCC	2 cut(s)	1784, 2206
BsuRI	GGCC	4 cut(s)	281, 1709, 1909, 2074
BsuTUI	ATCGAT	1 cut(s)	921
BtgI	CCRYGG	2 cut(s)	889, 2132
BtgZI	GCGATG	2 cut(s)	147, 826
BtrI	CACGTC	2 cut(s)	192, 1669
BtsCI	GGATG	6 cut(s)	555, 766, 1699, 2115, 2128, 2186
BtsI	GCAGTG	1 cut(s)	871
BtsIMutI	CAGTG	3 cut(s)	477, 579, 871
BveI	ACCTGC	2 cut(s)	153, 1289
Cac8I	GCNNGC	5 cut(s)	279, 805, 878, 1218, 1866
CaiI	CAGNNNCTG	1 cut(s)	62
CfoI	GCGC	2 cut(s)	502, 1158
Cfr10I	RCCGGY	1 cut(s)	1523
Cfr13I	GGNCC	2 cut(s)	1798, 1908
ClaI	ATCGAT	1 cut(s)	921
CseI	GACGC	1 cut(s)	137
CsiI	ACCWGGT	1 cut(s)	76
CspAI	ACCGGT	1 cut(s)	1523
CspCI	CAANNNNNGTGG	2 cut(s)	808, 843
DdeI	CTNAG	3 cut(s)	255, 1539, 2169
DpnI	GATC	6 cut(s)	66, 178, 1026, 1410, 1567, 1752
DpnII	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
DraI	TTTAAA	1 cut(s)	1183
EaeI	YGGCCR	1 cut(s)	1707
Eam1104I	CTCTTC	3 cut(s)	779, 1260, 1911
EarI	CTCTTC	3 cut(s)	779, 1260, 1911
Eco130I	CCWWGG	4 cut(s)	588, 889, 904, 2132
Eco147I	AGGCCT	1 cut(s)	2074
Eco31I	GGTCTC	2 cut(s)	1091, 1481
Eco32I	GATATC	1 cut(s)	919
Eco47I	GGWCC	1 cut(s)	1798
Eco57I	CTGAAG	3 cut(s)	413, 1284, 1613
Eco88I	CYCGRG	1 cut(s)	1910
Eco91I	GGTNACC	2 cut(s)	860, 884
EcoO65I	GGTNACC	2 cut(s)	860, 884
EcoRI	GAATTC	1 cut(s)	155
EcoRII	CCWGG	4 cut(s)	76, 880, 930, 979
EcoRV	GATATC	1 cut(s)	919
EcoT14I	CCWWGG	4 cut(s)	588, 889, 904, 2132
EcoT22I	ATGCAT	1 cut(s)	805
ErhI	CCWWGG	4 cut(s)	588, 889, 904, 2132
Esp3I	CGTCTC	1 cut(s)	1659
FalI	AAGNNNNNCTT	4 cut(s)	411, 443, 1770, 1802
FaqI	GGGAC	4 cut(s)	641, 1342, 1795, 2179
FbaI	TGATCA	2 cut(s)	64, 1408
FblI	GTMKAC	2 cut(s)	424, 1509
Fnu4HI	GCNGC	9 cut(s)	39, 57, 60, 139, 347, 350, 408, 646, 1195
FokI	GGATG	6 cut(s)	542, 773, 1706, 2115, 2122, 2173
Fsp4HI	GCNGC	9 cut(s)	39, 57, 60, 139, 347, 350, 408, 646, 1195
FspBI	CTAG	9 cut(s)	290, 561, 1217, 1505, 1772, 1865, 1905, 1928, 2235
GlaI	GCGC	2 cut(s)	501, 1157
GluI	GCNGC	9 cut(s)	39, 57, 60, 139, 347, 350, 408, 646, 1195
GsuI	CTGGAG	2 cut(s)	362, 963
HaeIII	GGCC	4 cut(s)	281, 1709, 1909, 2074
HapII	CCGG	2 cut(s)	689, 1524
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	2 cut(s)	502, 1158
Hin6I	GCGC	2 cut(s)	500, 1156
HinP1I	GCGC	2 cut(s)	500, 1156
HincII	GTYRAC	2 cut(s)	195, 829
HindII	GTYRAC	2 cut(s)	195, 829
HinfI	GANTC	7 cut(s)	521, 567, 602, 620, 1098, 1969, 2032
HpaII	CCGG	2 cut(s)	689, 1524
HphI	GGTGA	7 cut(s)	110, 272, 1313, 1325, 1438, 1513, 2234
Hpy166II	GTNNAC	8 cut(s)	195, 425, 477, 566, 664, 829, 1336, 1510
Hpy188I	TCNGA	8 cut(s)	256, 607, 1540, 1606, 1720, 1995, 2158, 2277
Hpy188III	TCNNGA	5 cut(s)	152, 1486, 1552, 1664, 1979
Hpy8I	GTNNAC	8 cut(s)	195, 425, 477, 566, 664, 829, 1336, 1510
HpyAV	CCTTC	9 cut(s)	363, 413, 443, 662, 1088, 1146, 1270, 1310, 2219
HpyCH4III	ACNGT	6 cut(s)	212, 481, 583, 794, 856, 1333
HpyCH4IV	ACGT	4 cut(s)	191, 1458, 1668, 1735
HpyF10VI	GCNNNNNNNGC	7 cut(s)	68, 138, 274, 346, 1222, 1870, 2036
HpyF3I	CTNAG	3 cut(s)	255, 1539, 2169
HpySE526I	ACGT	4 cut(s)	191, 1458, 1668, 1735
HspAI	GCGC	2 cut(s)	500, 1156
Ksp22I	TGATCA	2 cut(s)	64, 1408
Kzo9I	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
LguI	GCTCTTC	2 cut(s)	779, 1260
LmnI	GCTCC	3 cut(s)	343, 1727, 1870
Lsp1109I	GCAGC	7 cut(s)	50, 68, 71, 125, 333, 419, 657
LweI	GCATC	3 cut(s)	1167, 1610, 1972
MabI	ACCWGGT	1 cut(s)	76
MaeI	CTAG	9 cut(s)	290, 561, 1217, 1505, 1772, 1865, 1905, 1928, 2235
MaeII	ACGT	4 cut(s)	191, 1458, 1668, 1735
MaeIII	GTNAC	8 cut(s)	43, 481, 527, 860, 884, 1001, 1426, 2286
MalI	GATC	6 cut(s)	66, 178, 1026, 1410, 1567, 1752
MboI	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
MboII	GAAGA	6 cut(s)	796, 1277, 1606, 1928, 1938, 2209
MfeI	CAATTG	1 cut(s)	166
MflI	RGATCY	3 cut(s)	176, 1024, 1565
MhlI	GDGCHC	3 cut(s)	547, 1396, 1621
MlsI	TGGCCA	1 cut(s)	1709
MluNI	TGGCCA	1 cut(s)	1709
MlyI	GAGTC	2 cut(s)	530, 561
MmeI	TCCRAC	2 cut(s)	727, 2082
Mox20I	TGGCCA	1 cut(s)	1709
Mph1103I	ATGCAT	1 cut(s)	805
MroXI	GAANNNNTTC	3 cut(s)	619, 988, 1534
MscI	TGGCCA	1 cut(s)	1709
MseI	TTAA	6 cut(s)	632, 744, 1182, 1199, 1272, 2282
MslI	CAYNNNNRTG	2 cut(s)	2137, 2295
Msp20I	TGGCCA	1 cut(s)	1709
MspA1I	CMGCKG	2 cut(s)	41, 62
MspCI	CTTAAG	1 cut(s)	1271
MspI	CCGG	2 cut(s)	689, 1524
MspR9I	CCNGG	5 cut(s)	78, 689, 882, 932, 981
MunI	CAATTG	1 cut(s)	166
Mva1269I	GAATGC	2 cut(s)	653, 1967
MvaI	CCWGG	4 cut(s)	78, 882, 932, 981
MwoI	GCNNNNNNNGC	7 cut(s)	68, 138, 274, 346, 1222, 1870, 2036
NciI	CCSGG	1 cut(s)	689
NcoI	CCATGG	2 cut(s)	889, 2132
NdeII	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
NheI	GCTAGC	2 cut(s)	1216, 1864
NlaIV	GGNNCC	3 cut(s)	178, 1393, 1800
NmuCI	GTSAC	4 cut(s)	481, 527, 1426, 2286
NsiI	ATGCAT	1 cut(s)	805
NspI	RCATGY	2 cut(s)	807, 1547
NspV	TTCGAA	1 cut(s)	2195
PaeI	GCATGC	1 cut(s)	807
PaqCI	CACCTGC	1 cut(s)	1289
PceI	AGGCCT	1 cut(s)	2074
PciSI	GCTCTTC	2 cut(s)	779, 1260
PctI	GAATGC	2 cut(s)	653, 1967
PdmI	GAANNNNTTC	3 cut(s)	619, 988, 1534
PfeI	GAWTC	5 cut(s)	602, 620, 1098, 1969, 2032
PflMI	CCANNNNNTGG	1 cut(s)	709
PfoI	TCCNGGA	1 cut(s)	979
PinAI	ACCGGT	1 cut(s)	1523
PkrI	GCNGC	9 cut(s)	40, 58, 61, 140, 348, 351, 409, 647, 1196
PleI	GAGTC	2 cut(s)	529, 561
PpsI	GAGTC	2 cut(s)	529, 561
PsiI	TTATAA	1 cut(s)	1293
Psp6I	CCWGG	4 cut(s)	76, 880, 930, 979
PspEI	GGTNACC	2 cut(s)	860, 884
PspGI	CCWGG	4 cut(s)	76, 880, 930, 979
PspN4I	GGNNCC	3 cut(s)	178, 1393, 1800
PspPI	GGNCC	2 cut(s)	1798, 1908
PstNI	CAGNNNCTG	1 cut(s)	62
PsuI	RGATCY	3 cut(s)	176, 1024, 1565
PvuII	CAGCTG	2 cut(s)	41, 62
RseI	CAYNNNNRTG	2 cut(s)	2137, 2295
SapI	GCTCTTC	2 cut(s)	779, 1260
SaqAI	TTAA	6 cut(s)	632, 744, 1182, 1199, 1272, 2282
SatI	GCNGC	9 cut(s)	39, 57, 60, 139, 347, 350, 408, 646, 1195
Sau3AI	GATC	6 cut(s)	64, 176, 1024, 1408, 1565, 1750
Sau96I	GGNCC	2 cut(s)	1798, 1908
ScaI	AGTACT	3 cut(s)	738, 796, 2239
SchI	GAGTC	2 cut(s)	530, 561
ScrFI	CCNGG	5 cut(s)	78, 689, 882, 932, 981
SduI	GDGCHC	3 cut(s)	547, 1396, 1621
SexAI	ACCWGGT	1 cut(s)	76
SfaNI	GCATC	3 cut(s)	1167, 1610, 1972
SfcI	CTRYAG	1 cut(s)	1746
SfuI	TTCGAA	1 cut(s)	2195
SgrAI	CRCCGGYG	1 cut(s)	1523
SinI	GGWCC	1 cut(s)	1798
SmiMI	CAYNNNNRTG	2 cut(s)	2137, 2295
SmlI	CTYRAG	2 cut(s)	1271, 1758
SmoI	CTYRAG	2 cut(s)	1271, 1758
SpeI	ACTAGT	2 cut(s)	1504, 1771
SphI	GCATGC	1 cut(s)	807
SseBI	AGGCCT	1 cut(s)	2074
SsiI	CCGC	5 cut(s)	96, 350, 1194, 1868, 2210
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	9 cut(s)	290, 561, 1217, 1505, 1772, 1865, 1905, 1928, 2235
StuI	AGGCCT	1 cut(s)	2074
StyD4I	CCNGG	5 cut(s)	76, 687, 880, 930, 979
StyI	CCWWGG	4 cut(s)	588, 889, 904, 2132
TaaI	ACNGT	6 cut(s)	212, 481, 583, 794, 856, 1333
TaiI	ACGT	4 cut(s)	194, 1461, 1671, 1738
TaqI	TCGA	4 cut(s)	921, 1485, 1663, 2195
TaqII	GACCGA	2 cut(s)	846, 1505
TatI	WGTACW	4 cut(s)	736, 794, 1515, 2237
TauI	GCSGC	2 cut(s)	352, 1197
TfiI	GAWTC	5 cut(s)	602, 620, 1098, 1969, 2032
Tru1I	TTAA	6 cut(s)	632, 744, 1182, 1199, 1272, 2282
Tru9I	TTAA	6 cut(s)	632, 744, 1182, 1199, 1272, 2282
TscAI	CASTG	3 cut(s)	484, 586, 878
TseFI	GTSAC	4 cut(s)	481, 527, 1426, 2286
TseI	GCWGC	7 cut(s)	38, 56, 59, 138, 346, 407, 645
Tsp45I	GTSAC	4 cut(s)	481, 527, 1426, 2286
TspGWI	ACGGA	2 cut(s)	888, 1020
TspRI	CASTG	3 cut(s)	484, 586, 878
Van91I	CCANNNNNTGG	1 cut(s)	709
Vha464I	CTTAAG	1 cut(s)	1271
VpaK11BI	GGWCC	1 cut(s)	1798
XapI	RAATTY	7 cut(s)	155, 550, 1074, 1305, 1974, 1989, 2271
XceI	RCATGY	2 cut(s)	807, 1547
XmiI	GTMKAC	2 cut(s)	424, 1509
XmnI	GAANNNNTTC	3 cut(s)	619, 988, 1534
XspI	CTAG	9 cut(s)	290, 561, 1217, 1505, 1772, 1865, 1905, 1928, 2235
ZrmI	AGTACT	3 cut(s)	738, 796, 2239
Zsp2I	ATGCAT	1 cut(s)	805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.