Rh2BG054600

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
3960691 .. 3965403
4713 bp
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UTR
Exon/CDS
Intron
Rh2BG054600.1

Sequence Viewer

Length: 255 bp
ATGGGTGGCGATAGTGATGGAAGCTCTGCCGGCTCTCAGGAGTCCTTTGTGAAGTTGCCAACGACAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGACGATTCCATTTCAGATGATGACAGGCTTCAGTTTCTTCTCAAGGAAGTTCAGGGTAAGGACATAACAGAGCTTATTGCCTCTGCAAGGGAGAAGTTGGCTTCTGAAGCTGCTCTTGATTTGGTAGCTGTGATGTCAGTGGAGAATTATGTTTAA

Protein Analysis

84

Amino Acids

9.09

Weight (kDa)

4.24

Isoelectric Point (pI)

32.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 95
AcuI CTGAAG 2 cut(s) 113, 225
AfiI CCNNNNNNNGG 1 cut(s) 186
AluBI AGCT 5 cut(s) 24, 79, 172, 209, 227
AluI AGCT 5 cut(s) 24, 79, 172, 209, 227
ApeKI GCWGC 1 cut(s) 209
ApoI RAATTY 1 cut(s) 95
AsuHPI GGTGA 1 cut(s) 64
BbvI GCAGC 1 cut(s) 196
BccI CCATC 1 cut(s) 11
BisI GCNGC 1 cut(s) 210
BlsI GCNGC 1 cut(s) 211
BpuEI CTTGAG 1 cut(s) 125
Bsc4I CCNNNNNNNGG 1 cut(s) 186
Bse118I RCCGGY 1 cut(s) 29
BseLI CCNNNNNNNGG 1 cut(s) 186
BseMII CTCAG 1 cut(s) 50
BseXI GCAGC 1 cut(s) 196
BsiSI CCGG 1 cut(s) 30
BslI CCNNNNNNNGG 1 cut(s) 186
BspCNI CTCAG 1 cut(s) 49
BspQI GCTCTTC 1 cut(s) 86
BsrFI RCCGGY 1 cut(s) 29
BssAI RCCGGY 1 cut(s) 29
Bst6I CTCTTC 1 cut(s) 86
BstC8I GCNNGC 1 cut(s) 31
BstDEI CTNAG 1 cut(s) 36
BstENI CCTNNNNNAGG 1 cut(s) 184
BstMWI GCNNNNNNNGC 2 cut(s) 30, 206
BstV1I GCAGC 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 243
Cac8I GCNNGC 1 cut(s) 31
Cfr10I RCCGGY 1 cut(s) 29
CviJI RGCY 8 cut(s) 24, 33, 79, 127, 172, 200, 209, 227
CviKI_1 RGCY 8 cut(s) 24, 33, 79, 127, 172, 200, 209, 227
DdeI CTNAG 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 86
EarI CTCTTC 1 cut(s) 86
Eco57I CTGAAG 2 cut(s) 113, 225
EcoNI CCTNNNNNAGG 1 cut(s) 184
EcoRI GAATTC 1 cut(s) 95
FaiI YATR 2 cut(s) 164, 249
FalI AAGNNNNNCTT 2 cut(s) 198, 230
Fnu4HI GCNGC 1 cut(s) 210
Fsp4HI GCNGC 1 cut(s) 210
GluI GCNGC 1 cut(s) 210
HapII CCGG 1 cut(s) 30
HinfI GANTC 2 cut(s) 41, 104
HpaII CCGG 1 cut(s) 30
HphI GGTGA 1 cut(s) 64
Hpy166II GTNNAC 1 cut(s) 72
Hpy188I TCNGA 2 cut(s) 115, 205
Hpy188III TCNNGA 2 cut(s) 38, 215
Hpy8I GTNNAC 1 cut(s) 72
Hpy99I CGWCG 1 cut(s) 104
HpyCH4V TGCA 1 cut(s) 185
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 206
HpyF3I CTNAG 1 cut(s) 36
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
LguI GCTCTTC 1 cut(s) 86
LpnPI CCDG 4 cut(s) 23, 43, 109, 137
Lsp1109I GCAGC 1 cut(s) 196
MboII GAAGA 2 cut(s) 73, 128
MluCI AATT 2 cut(s) 95, 244
MlyI GAGTC 1 cut(s) 50
MnlI CCTC 1 cut(s) 190
MroNI GCCGGC 1 cut(s) 29
MseI TTAA 1 cut(s) 253
MspI CCGG 1 cut(s) 30
MwoI GCNNNNNNNGC 2 cut(s) 30, 206
NaeI GCCGGC 1 cut(s) 31
NgoMIV GCCGGC 1 cut(s) 29
PciSI GCTCTTC 1 cut(s) 86
PdiI GCCGGC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 104
PkrI GCNGC 1 cut(s) 211
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
SapI GCTCTTC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 253
SatI GCNGC 1 cut(s) 210
SchI GAGTC 1 cut(s) 50
SetI ASST 5 cut(s) 26, 81, 174, 211, 229
SgeI CNNG 8 cut(s) 42, 50, 88, 136, 154, 164, 198, 227
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
Sse9I AATT 2 cut(s) 95, 244
TaqI TCGA 1 cut(s) 99
TasI AATT 2 cut(s) 95, 244
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 1 cut(s) 253
Tru9I TTAA 1 cut(s) 253
TscAI CASTG 1 cut(s) 243
TseI GCWGC 1 cut(s) 209
TspDTI ATGAA 1 cut(s) 73
TspRI CASTG 1 cut(s) 243
XagI CCTNNNNNAGG 1 cut(s) 184
XapI RAATTY 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.