No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g06071 |
| malus_domestica | MD09G1261100.v1.1 |
| prunus_persica | Prupe.3G158400_v2.0.a1 |
| pyrus_communis | pycom09g17540 |
| rosa_chinensis | RchiOBHm_Chr1g0333501 RchiOBHm_Chr1g0334211 RchiOBHm_Chr7g0221661 |
| rosa_laevigata | RLG00000002147 RLG00000029549 RLG00000029550 RLG00000029599 RLG00000029600 RLG00000029601 |
| rosa_multiflora | Rmu_sc0000494.1_g000002 Rmu_sc0000494.1_g000004 Rmu_sc0000494.1_g000017 Rmu_sc0002955.1_g000015 Rmu_sc0003435.1_g000020 Rmu_sc0005016.1_g000034 Rmu_sc0012130.1_g000001 Rmu_sc0028037.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00088180 Rroxscaffold_3G00238140 Rroxscaffold_4G00317400 |
| rosa_rugosa | Rorug01G0109400 Rorug01G0109500 Rorug01G0110100 Rorug01G0110200 Rorug01G0110300 Rorug07G0202800 |
| rosa_samantha | Rh1BG101600 Rh1CG126900 Rh1CG129800 Rh7AG343300 Rh7BG333400 |
| rosa_wichuraiana | Rw0G003360 Rw7G029120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 4 cut(s) | 15, 162, 172, 214 |
| AgsI | TTSAA | 1 cut(s) | 104 |
| AjnI | CCWGG | 1 cut(s) | 184 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 60, 92 |
| AoxI | GGCC | 1 cut(s) | 127 |
| ApeKI | GCWGC | 1 cut(s) | 178 |
| ApoI | RAATTY | 4 cut(s) | 15, 162, 172, 214 |
| AsuHPI | GGTGA | 1 cut(s) | 209 |
| BbvCI | CCTCAGC | 1 cut(s) | 51 |
| BbvI | GCAGC | 1 cut(s) | 190 |
| BccI | CCATC | 1 cut(s) | 119 |
| BciT130I | CCWGG | 1 cut(s) | 186 |
| BfaI | CTAG | 2 cut(s) | 93, 241 |
| BisI | GCNGC | 1 cut(s) | 179 |
| BlsI | GCNGC | 1 cut(s) | 180 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| BmrI | ACTGGG | 1 cut(s) | 203 |
| BmsI | GCATC | 2 cut(s) | 27, 190 |
| BmuI | ACTGGG | 1 cut(s) | 203 |
| Bpu10I | CCTNAGC | 1 cut(s) | 51 |
| BsaJI | CCNNGG | 1 cut(s) | 130 |
| Bse1I | ACTGG | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 186 |
| BseDI | CCNNGG | 1 cut(s) | 130 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseMII | CTCAG | 2 cut(s) | 42, 222 |
| BseNI | ACTGG | 1 cut(s) | 198 |
| BseXI | GCAGC | 1 cut(s) | 190 |
| BshFI | GGCC | 1 cut(s) | 129 |
| BslFI | GGGAC | 1 cut(s) | 160 |
| BsmFI | GGGAC | 1 cut(s) | 160 |
| BsnI | GGCC | 1 cut(s) | 129 |
| BspANI | GGCC | 1 cut(s) | 129 |
| BspCNI | CTCAG | 2 cut(s) | 43, 223 |
| BspHI | TCATGA | 1 cut(s) | 22 |
| BsrI | ACTGG | 1 cut(s) | 198 |
| BssECI | CCNNGG | 1 cut(s) | 130 |
| BssT1I | CCWWGG | 1 cut(s) | 130 |
| Bst2UI | CCWGG | 1 cut(s) | 186 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 37, 175 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 58 |
| BstDEI | CTNAG | 2 cut(s) | 51, 231 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 37, 175 |
| BstNI | CCWGG | 1 cut(s) | 186 |
| BstNSI | RCATGY | 2 cut(s) | 50, 60 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstV1I | GCAGC | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 58 |
| CciI | TCATGA | 1 cut(s) | 22 |
| CviAII | CATG | 5 cut(s) | 23, 47, 57, 88, 122 |
| CviJI | RGCY | 3 cut(s) | 92, 129, 211 |
| CviKI_1 | RGCY | 3 cut(s) | 92, 129, 211 |
| DdeI | CTNAG | 2 cut(s) | 51, 231 |
| Eco130I | CCWWGG | 1 cut(s) | 130 |
| EcoRI | GAATTC | 1 cut(s) | 214 |
| EcoRII | CCWGG | 1 cut(s) | 184 |
| EcoT14I | CCWWGG | 1 cut(s) | 130 |
| EcoT22I | ATGCAT | 2 cut(s) | 48, 123 |
| ErhI | CCWWGG | 1 cut(s) | 130 |
| FaeI | CATG | 5 cut(s) | 26, 50, 60, 91, 125 |
| FaiI | YATR | 5 cut(s) | 24, 48, 58, 89, 123 |
| FaqI | GGGAC | 1 cut(s) | 160 |
| FatI | CATG | 5 cut(s) | 22, 46, 56, 87, 121 |
| Fnu4HI | GCNGC | 1 cut(s) | 179 |
| FokI | GGATG | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 1 cut(s) | 179 |
| FspBI | CTAG | 2 cut(s) | 93, 241 |
| GluI | GCNGC | 1 cut(s) | 179 |
| HaeIII | GGCC | 1 cut(s) | 129 |
| Hin1II | CATG | 5 cut(s) | 26, 50, 60, 91, 125 |
| HinfI | GANTC | 2 cut(s) | 76, 148 |
| HphI | GGTGA | 1 cut(s) | 209 |
| Hpy188I | TCNGA | 1 cut(s) | 232 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| HpyAV | CCTTC | 1 cut(s) | 237 |
| HpyCH4V | TGCA | 7 cut(s) | 13, 40, 46, 73, 121, 169, 178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 37, 175 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 231 |
| Hsp92II | CATG | 5 cut(s) | 26, 50, 60, 91, 125 |
| LpnPI | CCDG | 4 cut(s) | 74, 171, 179, 198 |
| Lsp1109I | GCAGC | 1 cut(s) | 190 |
| LweI | GCATC | 2 cut(s) | 27, 190 |
| MaeI | CTAG | 2 cut(s) | 93, 241 |
| MaeIII | GTNAC | 1 cut(s) | 197 |
| MboII | GAAGA | 1 cut(s) | 11 |
| MluCI | AATT | 5 cut(s) | 15, 104, 162, 172, 214 |
| MlyI | GAGTC | 1 cut(s) | 142 |
| MnlI | CCTC | 3 cut(s) | 46, 128, 168 |
| Mph1103I | ATGCAT | 2 cut(s) | 48, 123 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| MvaI | CCWGG | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 37, 175 |
| NlaIII | CATG | 5 cut(s) | 26, 50, 60, 91, 125 |
| NmuCI | GTSAC | 1 cut(s) | 197 |
| NsiI | ATGCAT | 2 cut(s) | 48, 123 |
| NspI | RCATGY | 2 cut(s) | 50, 60 |
| PaeI | GCATGC | 2 cut(s) | 50, 60 |
| PagI | TCATGA | 1 cut(s) | 22 |
| PfeI | GAWTC | 1 cut(s) | 76 |
| PkrI | GCNGC | 1 cut(s) | 180 |
| PleI | GAGTC | 1 cut(s) | 142 |
| PpsI | GAGTC | 1 cut(s) | 142 |
| Psp6I | CCWGG | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 184 |
| SatI | GCNGC | 1 cut(s) | 179 |
| SchI | GAGTC | 1 cut(s) | 142 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SetI | ASST | 3 cut(s) | 10, 139, 160 |
| SfaNI | GCATC | 2 cut(s) | 27, 190 |
| SphI | GCATGC | 2 cut(s) | 50, 60 |
| Sse9I | AATT | 5 cut(s) | 15, 104, 162, 172, 214 |
| SspMI | CTAG | 2 cut(s) | 93, 241 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| StyI | CCWWGG | 1 cut(s) | 130 |
| TasI | AATT | 5 cut(s) | 15, 104, 162, 172, 214 |
| TfiI | GAWTC | 1 cut(s) | 76 |
| TseFI | GTSAC | 1 cut(s) | 197 |
| TseI | GCWGC | 1 cut(s) | 178 |
| Tsp45I | GTSAC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 1 cut(s) | 11 |
| XapI | RAATTY | 4 cut(s) | 15, 162, 172, 214 |
| XceI | RCATGY | 2 cut(s) | 50, 60 |
| XspI | CTAG | 2 cut(s) | 93, 241 |
| Zsp2I | ATGCAT | 2 cut(s) | 48, 123 |