Rroxscaffold_7G00208200

B3 domain-containing protein Os01g0234100-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
58182155 .. 58191761
9607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00208200.1

Sequence Viewer

Length: 2580 bp
ATGAAGTCTGACAGCCATAAACCAAAGACATGTAAGAAGGCCAAAGTCAAAAGCTTATATGATACATCCAAAGCTCAGTGTTCTGTTCTTGAAAGAGCAAATGAGCTTGCAGCAAACCTAGCACCAGAGTTTCCTAGCCTCGTCAAAGTTATGATGCCGTCACATGTTGCTCGAGTCTTCTGGCTTGGTATTCCTAGGTCGTTCTGCCGTGAGCATATGCCAAAGGATGACACAATGATTGTCTTGGAAGATGAAAATGGGGAAGAATACCAAACGAAATATCTTGTGGCAAAGGAAGGATTGAGCGGTGGATGGAGAGCATTCTCAGTTGCTCACAAGTTACTGGAGGGAGATGTTCTAGTTTTCCACAAAGTCATGCCATCAAAATTGAAGGTGTATATTGTTAGATCAAATGGTTCAGATGAAGTGGATTGCTCTCTTGGTCTTATCAAATTTGATCATGGCATTAGACGAATCAAAACTACAGAAGTTACTGTATGTGAAAGCTCAAAAAATGGGAAACTGGAACCTATTTCAGTGGAAACTCTGCATGCAAATGTTCAGAAGGAGAACACGACAGCCTGTAATACCAAGTCTGGTCCAATATCAAACCAGTATCAAATAGATAGTGAAGTTCTTTATTCTGAAGTTCTGGATGGAATAAGGGTTTCAGAAGTGAGCTGCATTGAGAACTTTAAGGTCACAGTCAATGGTTCAATCATAAATGCTGAGATCTCCGAACACCATCTGATCAAGTACTATGAGCTCTGCCGCAGTCAAAACTCATTTCTTCATGAGCATATTCTTGTGCGTCTTAACTCCAGTCTGGTTGCTGGAATAATTTCTGAGACAGTAAATCTTTCGGATGCCATTAGAGTGTGCAAGATTACTACTTCAGAGTGTGATTTTTTGACTTGGGATAGGACTCTGCAAGCTTCTGAGATGTTAGGCATGAATGTTGGGTTCTTGCGTGCCCGGCTGGACCAGCTTGTAAGCCTTGCTTCAAAATCAAAACTGTGTAAAGAGGCTAGACTTGCAAGAGACCAAGCAGTAAAGGATATGATAACCTTGGAAGCAAAGCTTGTAAGAGCCAGAGAGGTCATAAATAGGCTCAACTTTGAGATTGAGAGTCTAAATACAAGTTCAAAGGAGCTTGAGGCTATGTTCAAAGAAGTGGCTAAGGCCCCTTGCTGCTCTTCAATGCGTACAATGTATGGCTCCCTCATTGAAGAAGATATTCAAGAGACCTTGAAGAGTCTGCATGAGACACAGAGACTCTCAATGGCTATTGTTCCATTCCAGGAACACATACCCTCCTCTTGTTCACCCCCCAAGAATGATTTGCAGTTCAACACTGAGAGGCCACTAAAGGAGAAGGAACATGTTTTCAAGGACAAGTTTCCATGTCTCAGAGAGATAACCAACGTGGTCAATGCTAATACCATGAAGTCTGAAAGTGACAAACTGAAGAGATGTAAGAAAGCTACTGTAGAAAGCTTGTATGATACTTCCGAAGCTCAGTGTTCTGTTATGGAGAGAGCGAAGAAGCTTGAAGCCAATCTAGCACCAGAGTTCCCTAGAGTGGCCAAAGTTATGCGCCCATCAAATGTCACTGGATGCTTCTGTCTTAATCTTCCTAAGAAATTTTGCGATGATCATTTGCCAAAGCAGGATACAATGATTGTTTTAGAAGATGAAAGTGGGAGAGAATTCCAGACGAAATATCTTGTGGGAAAGGCTGGACTTAGTGCTGGATGGAGAGGATTTTCAATTGCTCACAAGTTATTGGCTGGAGATGTTGTAGTTTTCCAGCGAGTTACTCCTTCCAAATTTAAGGTGTATATTGTTAGATCAAGTGGTTTAGATGTGGCAGATTGTGCTCTTGGCCTTGTTAAATTAGATGCTGGCATCAGACAAATGGATACTGCAAACTTTACTGCACGTGAAACTGCAAAAGTGTCCATTCCTCGTGAACCTATTCAAAAGAAGAACACCATAGCCTCCAATACCTCATTGGCTCCAATGTCAGATCACTCTGGAAATGATGGTGAAGATTTTGGTTCTGAAGTTCTGGATGGAATTAGGCTTGCAGAGTCTGTTATCCCTTTCAAAGAAGTGAAAGGAATGGAAAACTTTGATGTCATTATCAATGGTTTGGTCCTAAATTCTGAGTTTTCAAAGTACCATTTGACCAAGTACTATGAGCTCTGCTGCAGTCAAAGCTCATTCCTTCATAAGAATATTCTTGAGGGTCTTAACTTCAAACTGGTTGCTGGAATAATTTCTGAGACAATCAATATTTCAGATGCCATTAGAGCCTGCAAGATAACCACTTCAGAGTGTGATTTTTTGACTTGGGATAAGACTTTGCAAGCCTCTGAGACGTTAGGGATGAATGTTGGCTTCCTGCGTACCCGGCTAAACAAGCTTGCAAGCCTTGCTTCAGAATCAAAACGATATAGTAATCTTGAAGGGGAAAAGGAGACCACAACTTGGCTTGATTCTGAGATTGAGACTCATAATTTGTTGTCTGAGAGGCTTAAAGCTATGTTCGAAGAAGTGGCTAGGGCCCCTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

859

Amino Acids

96.28

Weight (kDa)

6.86

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 48 - 137 8.3e-17 B3 DNA binding domain
B3 PF02362 529 - 618 2e-15 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2493
AccBSI CCGCTC 1 cut(s) 306
AciI CCGC 2 cut(s) 306, 772
AcoI YGGCCR 1 cut(s) 1584
AcsI RAATTY 5 cut(s) 452, 1643, 1709, 1829, 2164
AcuI CTGAAG 6 cut(s) 666, 879, 1487, 2085, 2319, 2427
AcvI CACGTG 1 cut(s) 1943
AfaI GTAC 5 cut(s) 758, 1207, 2183, 2198, 2413
AfiI CCNNNNNNNGG 2 cut(s) 1582, 2493
AflIII ACRYGT 3 cut(s) 29, 163, 1381
AjnI CCWGG 1 cut(s) 1299
Alw21I GWGCWC 3 cut(s) 768, 1882, 2208
AlwNI CAGNNNCTG 1 cut(s) 2096
Ama87I CYCGRG 1 cut(s) 171
AoxI GGCC 6 cut(s) 39, 1182, 1361, 1584, 1885, 2568
ApaI GGGCCC 1 cut(s) 2572
ApeKI GCWGC 4 cut(s) 110, 681, 1191, 2211
ApoI RAATTY 5 cut(s) 452, 1643, 1709, 1829, 2164
ArsI GACNNNNNNTTYG 2 cut(s) 2506, 2538
Asp700I GAANNNNTTC 4 cut(s) 841, 1236, 1977, 2281
AspA2I CCTAGG 1 cut(s) 194
AspLEI GCGC 1 cut(s) 1599
AspS9I GGNCC 6 cut(s) 599, 982, 1183, 2158, 2568, 2569
AsuC2I CCSGG 2 cut(s) 976, 2416
AsuHPI GGTGA 2 cut(s) 1317, 2060
AsuII TTCGAA 1 cut(s) 2553
AvaI CYCGRG 1 cut(s) 171
AvaII GGWCC 3 cut(s) 599, 982, 2158
AvrII CCTAGG 1 cut(s) 194
BaeGI GKGCMC 2 cut(s) 976, 2572
BalI TGGCCA 1 cut(s) 1586
BanII GRGCYC 3 cut(s) 768, 2208, 2572
BauI CACGAG 1 cut(s) 1968
BbrPI CACGTG 1 cut(s) 1943
BbsI GAAGAC 1 cut(s) 169
Bbv12I GWGCWC 3 cut(s) 768, 1882, 2208
BbvI GCAGC 4 cut(s) 122, 668, 1178, 2198
BccI CCATC 8 cut(s) 306, 388, 650, 753, 1609, 1749, 2039, 2069
BceAI ACGGC 2 cut(s) 142, 192
BciT130I CCWGG 1 cut(s) 1301
BciVI GTATCC 2 cut(s) 1666, 1915
BclI TGATCA 3 cut(s) 457, 750, 1654
BcnI CCSGG 2 cut(s) 976, 2416
BfaI CTAG 8 cut(s) 119, 135, 195, 359, 1029, 1562, 1578, 2565
BfmI CTRYAG 3 cut(s) 483, 1488, 2212
BfuI GTATCC 2 cut(s) 1666, 1915
BglII AGATCT 1 cut(s) 732
BisI GCNGC 5 cut(s) 111, 682, 772, 1192, 2212
BlnI CCTAGG 1 cut(s) 194
BlsI GCNGC 5 cut(s) 112, 683, 773, 1193, 2213
BmcAI AGTACT 2 cut(s) 758, 2198
Bme1390I CCNGG 3 cut(s) 976, 1301, 2416
Bme18I GGWCC 3 cut(s) 599, 982, 2158
BmeT110I CYCGRG 1 cut(s) 171
BmgT120I GGNCC 6 cut(s) 599, 982, 1183, 2158, 2568, 2569
BmiI GGNNCC 6 cut(s) 528, 1185, 1219, 2019, 2570, 2571
BmrFI CCNGG 3 cut(s) 976, 1301, 2416
BmsI GCATC 6 cut(s) 144, 856, 1607, 1891, 1917, 2296
BpiI GAAGAC 1 cut(s) 169
BpmI CTGGAG 3 cut(s) 365, 805, 1812
Bpu10I CCTNAGC 1 cut(s) 1179
Bpu14I TTCGAA 1 cut(s) 2553
BpuEI CTTGAG 2 cut(s) 1175, 2267
BpuMI CCSGG 2 cut(s) 976, 2416
BsaAI YACGTR 1 cut(s) 1943
BsaI GGTCTC 3 cut(s) 1035, 1238, 2477
BsaJI CCNNGG 3 cut(s) 194, 1068, 2573
BsaXI ACNNNNNCTCC 4 cut(s) 1298, 1328, 1785, 1815
Bsc4I CCNNNNNNNGG 2 cut(s) 1582, 2493
Bse1I ACTGG 6 cut(s) 348, 528, 613, 822, 1618, 2271
BseBI CCWGG 1 cut(s) 1301
BseDI CCNNGG 3 cut(s) 194, 1068, 2573
BseGI GGATG 9 cut(s) 65, 232, 317, 661, 871, 1622, 1760, 2080, 2397
BseLI CCNNNNNNNGG 2 cut(s) 1582, 2493
BseNI ACTGG 6 cut(s) 348, 528, 613, 822, 1618, 2271
BseRI GAGGAG 1 cut(s) 1306
BseSI GKGCMC 2 cut(s) 976, 2572
BseXI GCAGC 4 cut(s) 122, 668, 1178, 2198
BsgI GTGCAG 1 cut(s) 1923
BshFI GGCC 6 cut(s) 41, 1184, 1363, 1586, 1887, 2570
BsiHKAI GWGCWC 3 cut(s) 768, 1882, 2208
BsiHKCI CYCGRG 1 cut(s) 171
BsiSI CCGG 2 cut(s) 976, 2416
BslI CCNNNNNNNGG 2 cut(s) 1582, 2493
BsmBI CGTCTC 1 cut(s) 2375
BsmI GAATGC 1 cut(s) 320
BsnI GGCC 6 cut(s) 41, 1184, 1363, 1586, 1887, 2570
Bso31I GGTCTC 3 cut(s) 1035, 1238, 2477
BsoBI CYCGRG 1 cut(s) 171
Bsp119I TTCGAA 1 cut(s) 2553
Bsp120I GGGCCC 1 cut(s) 2568
Bsp1286I GDGCHC 5 cut(s) 768, 976, 1882, 2208, 2572
Bsp143I GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
BspACI CCGC 2 cut(s) 306, 772
BspANI GGCC 6 cut(s) 41, 1184, 1363, 1586, 1887, 2570
BspHI TCATGA 1 cut(s) 793
BspLI GGNNCC 6 cut(s) 528, 1185, 1219, 2019, 2570, 2571
BspMAI CTGCAG 1 cut(s) 2216
BspQI GCTCTTC 1 cut(s) 1201
BspT104I TTCGAA 1 cut(s) 2553
BspTNI GGTCTC 3 cut(s) 1035, 1238, 2477
BsrBI CCGCTC 1 cut(s) 306
BsrI ACTGG 6 cut(s) 348, 528, 613, 822, 1618, 2271
BssECI CCNNGG 3 cut(s) 194, 1068, 2573
BssMI GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
BssSI CACGAG 1 cut(s) 1968
BssT1I CCWWGG 3 cut(s) 194, 1068, 2573
Bst2BI CACGAG 1 cut(s) 1968
Bst2UI CCWGG 1 cut(s) 1301
Bst4CI ACNGT 5 cut(s) 496, 706, 853, 1017, 1489
Bst6I CTCTTC 3 cut(s) 1201, 1247, 1463
BstAPI GCANNNNNTGC 2 cut(s) 1877, 2438
BstBAI YACGTR 1 cut(s) 1943
BstBI TTCGAA 1 cut(s) 2553
BstF5I GGATG 9 cut(s) 65, 232, 317, 661, 871, 1622, 1760, 2080, 2397
BstHHI GCGC 1 cut(s) 1599
BstKTI GATC 7 cut(s) 410, 460, 735, 753, 1657, 1853, 2032
BstMBI GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
BstNI CCWGG 1 cut(s) 1301
BstNSI RCATGY 4 cut(s) 33, 167, 554, 1385
BstSCI CCNGG 3 cut(s) 974, 1299, 2414
BstSFI CTRYAG 3 cut(s) 483, 1488, 2212
BstSLI GKGCMC 2 cut(s) 976, 2572
BstV1I GCAGC 4 cut(s) 122, 668, 1178, 2198
BstV2I GAAGAC 1 cut(s) 169
BstX2I RGATCY 1 cut(s) 732
BstYI RGATCY 1 cut(s) 732
BsuI GTATCC 2 cut(s) 1666, 1915
BsuRI GGCC 6 cut(s) 41, 1184, 1363, 1586, 1887, 2570
BtgZI GCGATG 1 cut(s) 1665
BtsCI GGATG 9 cut(s) 65, 232, 317, 661, 871, 1622, 1760, 2080, 2397
BtsIMutI CAGTG 5 cut(s) 83, 543, 1353, 1526, 1611
CaiI CAGNNNCTG 1 cut(s) 2096
CciI TCATGA 1 cut(s) 793
CfoI GCGC 1 cut(s) 1599
Cfr13I GGNCC 6 cut(s) 599, 982, 1183, 2158, 2568, 2569
CseI GACGC 1 cut(s) 800
Csp6I GTAC 5 cut(s) 757, 1206, 2182, 2197, 2412
CviQI GTAC 5 cut(s) 757, 1206, 2182, 2197, 2412
DpnI GATC 7 cut(s) 409, 459, 734, 752, 1656, 1852, 2031
DpnII GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
EaeI YGGCCR 1 cut(s) 1584
Eam1104I CTCTTC 3 cut(s) 1201, 1247, 1463
EarI CTCTTC 3 cut(s) 1201, 1247, 1463
Ecl136II GAGCTC 2 cut(s) 766, 2206
Eco130I CCWWGG 3 cut(s) 194, 1068, 2573
Eco24I GRGCYC 3 cut(s) 768, 2208, 2572
Eco31I GGTCTC 3 cut(s) 1035, 1238, 2477
Eco47I GGWCC 3 cut(s) 599, 982, 2158
Eco53kI GAGCTC 2 cut(s) 766, 2206
Eco57I CTGAAG 6 cut(s) 666, 879, 1487, 2085, 2319, 2427
Eco72I CACGTG 1 cut(s) 1943
Eco88I CYCGRG 1 cut(s) 171
EcoICRI GAGCTC 2 cut(s) 766, 2206
EcoO109I RGGNCCY 3 cut(s) 1183, 2568, 2569
EcoRI GAATTC 1 cut(s) 1709
EcoRII CCWGG 1 cut(s) 1299
EcoT14I CCWWGG 3 cut(s) 194, 1068, 2573
EcoT38I GRGCYC 3 cut(s) 768, 2208, 2572
ErhI CCWWGG 3 cut(s) 194, 1068, 2573
Esp3I CGTCTC 1 cut(s) 2375
FalI AAGNNNNNCTT 6 cut(s) 985, 1017, 1065, 1097, 2425, 2457
FauNDI CATATG 1 cut(s) 216
FbaI TGATCA 3 cut(s) 457, 750, 1654
Fnu4HI GCNGC 5 cut(s) 111, 682, 772, 1192, 2212
FokI GGATG 9 cut(s) 52, 239, 324, 668, 878, 1629, 1767, 2087, 2404
FriOI GRGCYC 3 cut(s) 768, 2208, 2572
Fsp4HI GCNGC 5 cut(s) 111, 682, 772, 1192, 2212
FspBI CTAG 8 cut(s) 119, 135, 195, 359, 1029, 1562, 1578, 2565
GlaI GCGC 1 cut(s) 1598
GluI GCNGC 5 cut(s) 111, 682, 772, 1192, 2212
GsuI CTGGAG 3 cut(s) 365, 805, 1812
HaeIII GGCC 6 cut(s) 41, 1184, 1363, 1586, 1887, 2570
HapII CCGG 2 cut(s) 976, 2416
HgaI GACGC 1 cut(s) 800
HhaI GCGC 1 cut(s) 1599
Hin6I GCGC 1 cut(s) 1597
HinP1I GCGC 1 cut(s) 1597
HindIII AAGCTT 6 cut(s) 52, 933, 1079, 1495, 1547, 2426
HpaII CCGG 2 cut(s) 976, 2416
HphI GGTGA 2 cut(s) 1317, 2060
Hpy166II GTNNAC 2 cut(s) 1325, 1973
Hpy8I GTNNAC 2 cut(s) 1325, 1973
HpyAV CCTTC 8 cut(s) 31, 290, 385, 559, 1369, 1833, 2240, 2465
HpyCH4III ACNGT 5 cut(s) 496, 706, 853, 1017, 1489
HpyCH4IV ACGT 3 cut(s) 1425, 1942, 2384
HpySE526I ACGT 3 cut(s) 1425, 1942, 2384
HspAI GCGC 1 cut(s) 1597
Ksp22I TGATCA 3 cut(s) 457, 750, 1654
Kzo9I GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
LguI GCTCTTC 1 cut(s) 1201
LmnI GCTCC 3 cut(s) 1150, 1223, 2023
Lsp1109I GCAGC 4 cut(s) 122, 668, 1178, 2198
LweI GCATC 6 cut(s) 144, 856, 1607, 1891, 1917, 2296
MaeI CTAG 8 cut(s) 119, 135, 195, 359, 1029, 1562, 1578, 2565
MaeII ACGT 3 cut(s) 1425, 1942, 2384
MaeIII GTNAC 7 cut(s) 159, 339, 490, 700, 1457, 1609, 1816
MalI GATC 7 cut(s) 409, 459, 734, 752, 1656, 1852, 2031
MbiI CCGCTC 1 cut(s) 306
MboI GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
MfeI CAATTG 1 cut(s) 1770
MflI RGATCY 1 cut(s) 732
MhlI GDGCHC 5 cut(s) 768, 976, 1882, 2208, 2572
MlsI TGGCCA 1 cut(s) 1586
MluNI TGGCCA 1 cut(s) 1586
MlyI GAGTC 7 cut(s) 183, 919, 1138, 1264, 1269, 2102, 2509
Mox20I TGGCCA 1 cut(s) 1586
MroXI GAANNNNTTC 4 cut(s) 841, 1236, 1977, 2281
MscI TGGCCA 1 cut(s) 1586
MseI TTAA 7 cut(s) 696, 816, 1629, 1833, 1893, 2256, 2541
MslI CAYNNNNRTG 2 cut(s) 555, 875
Msp20I TGGCCA 1 cut(s) 1586
MspI CCGG 2 cut(s) 976, 2416
MspR9I CCNGG 3 cut(s) 976, 1301, 2416
MunI CAATTG 1 cut(s) 1770
Mva1269I GAATGC 1 cut(s) 320
MvaI CCWGG 1 cut(s) 1301
NciI CCSGG 2 cut(s) 976, 2416
NdeI CATATG 1 cut(s) 216
NdeII GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
NlaIV GGNNCC 6 cut(s) 528, 1185, 1219, 2019, 2570, 2571
NmuCI GTSAC 4 cut(s) 159, 700, 1457, 1609
NspI RCATGY 4 cut(s) 33, 167, 554, 1385
NspV TTCGAA 1 cut(s) 2553
PaeI GCATGC 1 cut(s) 554
PaeR7I CTCGAG 1 cut(s) 171
PagI TCATGA 1 cut(s) 793
PciI ACATGT 3 cut(s) 29, 163, 1381
PciSI GCTCTTC 1 cut(s) 1201
PctI GAATGC 1 cut(s) 320
PdmI GAANNNNTTC 4 cut(s) 841, 1236, 1977, 2281
PfeI GAWTC 3 cut(s) 474, 2447, 2501
PflMI CCANNNNNTGG 1 cut(s) 2493
PfoI TCCNGGA 1 cut(s) 1299
PkrI GCNGC 5 cut(s) 112, 683, 773, 1193, 2213
PleI GAGTC 7 cut(s) 182, 919, 1137, 1263, 1269, 2101, 2509
PmaCI CACGTG 1 cut(s) 1943
PmlI CACGTG 1 cut(s) 1943
PpsI GAGTC 7 cut(s) 182, 919, 1137, 1263, 1269, 2101, 2509
Ppu21I YACGTR 1 cut(s) 1943
PscI ACATGT 3 cut(s) 29, 163, 1381
Psp124BI GAGCTC 2 cut(s) 768, 2208
Psp6I CCWGG 1 cut(s) 1299
PspCI CACGTG 1 cut(s) 1943
PspGI CCWGG 1 cut(s) 1299
PspN4I GGNNCC 6 cut(s) 528, 1185, 1219, 2019, 2570, 2571
PspOMI GGGCCC 1 cut(s) 2568
PspPI GGNCC 6 cut(s) 599, 982, 1183, 2158, 2568, 2569
PspXI VCTCGAGB 1 cut(s) 171
PstI CTGCAG 1 cut(s) 2216
PstNI CAGNNNCTG 1 cut(s) 2096
PsuI RGATCY 1 cut(s) 732
RsaI GTAC 5 cut(s) 758, 1207, 2183, 2198, 2413
RsaNI GTAC 5 cut(s) 757, 1206, 2182, 2197, 2412
RseI CAYNNNNRTG 2 cut(s) 555, 875
SacI GAGCTC 2 cut(s) 768, 2208
SapI GCTCTTC 1 cut(s) 1201
SaqAI TTAA 7 cut(s) 696, 816, 1629, 1833, 1893, 2256, 2541
SatI GCNGC 5 cut(s) 111, 682, 772, 1192, 2212
Sau3AI GATC 7 cut(s) 407, 457, 732, 750, 1654, 1850, 2029
Sau96I GGNCC 6 cut(s) 599, 982, 1183, 2158, 2568, 2569
ScaI AGTACT 2 cut(s) 758, 2198
SchI GAGTC 7 cut(s) 183, 919, 1138, 1264, 1269, 2102, 2509
ScrFI CCNGG 3 cut(s) 976, 1301, 2416
SduI GDGCHC 5 cut(s) 768, 976, 1882, 2208, 2572
SfaNI GCATC 6 cut(s) 144, 856, 1607, 1891, 1917, 2296
SfcI CTRYAG 3 cut(s) 483, 1488, 2212
Sfr274I CTCGAG 1 cut(s) 171
SfuI TTCGAA 1 cut(s) 2553
SinI GGWCC 3 cut(s) 599, 982, 2158
SlaI CTCGAG 1 cut(s) 171
SmiMI CAYNNNNRTG 2 cut(s) 555, 875
SmlI CTYRAG 3 cut(s) 171, 1154, 2246
SmoI CTYRAG 3 cut(s) 171, 1154, 2246
SphI GCATGC 1 cut(s) 554
SsiI CCGC 2 cut(s) 306, 772
SspI AATATT 2 cut(s) 2242, 2299
SspMI CTAG 8 cut(s) 119, 135, 195, 359, 1029, 1562, 1578, 2565
SstI GAGCTC 2 cut(s) 768, 2208
StyD4I CCNGG 3 cut(s) 974, 1299, 2414
StyI CCWWGG 3 cut(s) 194, 1068, 2573
TaaI ACNGT 5 cut(s) 496, 706, 853, 1017, 1489
TaiI ACGT 3 cut(s) 1428, 1945, 2387
TaqI TCGA 2 cut(s) 172, 2553
TatI WGTACW 2 cut(s) 756, 2196
TauI GCSGC 1 cut(s) 774
TfiI GAWTC 3 cut(s) 474, 2447, 2501
Tru1I TTAA 7 cut(s) 696, 816, 1629, 1833, 1893, 2256, 2541
Tru9I TTAA 7 cut(s) 696, 816, 1629, 1833, 1893, 2256, 2541
TscAI CASTG 5 cut(s) 83, 543, 1360, 1526, 1618
TseFI GTSAC 4 cut(s) 159, 700, 1457, 1609
TseI GCWGC 4 cut(s) 110, 681, 1191, 2211
Tsp45I GTSAC 4 cut(s) 159, 700, 1457, 1609
TspDTI ATGAA 9 cut(s) 17, 267, 438, 782, 968, 1460, 1710, 2222, 2408
TspRI CASTG 5 cut(s) 83, 543, 1360, 1526, 1618
Van91I CCANNNNNTGG 1 cut(s) 2493
VpaK11BI GGWCC 3 cut(s) 599, 982, 2158
XapI RAATTY 5 cut(s) 452, 1643, 1709, 1829, 2164
XceI RCATGY 4 cut(s) 33, 167, 554, 1385
XcmI CCANNNNNNNNNTGG 1 cut(s) 2011
XhoI CTCGAG 1 cut(s) 171
XmaJI CCTAGG 1 cut(s) 194
XmnI GAANNNNTTC 4 cut(s) 841, 1236, 1977, 2281
XspI CTAG 8 cut(s) 119, 135, 195, 359, 1029, 1562, 1578, 2565
ZrmI AGTACT 2 cut(s) 758, 2198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.