E3 ubiquitin-protein ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 273, 294 |
| AcoI | YGGCCR | 1 cut(s) | 361 |
| AgsI | TTSAA | 1 cut(s) | 421 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 338, 370 |
| AluBI | AGCT | 3 cut(s) | 278, 404, 521 |
| AluI | AGCT | 3 cut(s) | 278, 404, 521 |
| Alw26I | GTCTC | 4 cut(s) | 86, 222, 224, 312 |
| AoxI | GGCC | 2 cut(s) | 85, 361 |
| ApeKI | GCWGC | 1 cut(s) | 521 |
| AsuHPI | GGTGA | 5 cut(s) | 90, 109, 125, 133, 227 |
| BbsI | GAAGAC | 1 cut(s) | 346 |
| BbvI | GCAGC | 1 cut(s) | 508 |
| BccI | CCATC | 2 cut(s) | 263, 439 |
| BceAI | ACGGC | 1 cut(s) | 376 |
| BcoDI | GTCTC | 4 cut(s) | 86, 222, 224, 312 |
| BisI | GCNGC | 1 cut(s) | 522 |
| BlsI | GCNGC | 1 cut(s) | 523 |
| BpiI | GAAGAC | 1 cut(s) | 346 |
| BsaJI | CCNNGG | 1 cut(s) | 308 |
| Bse3DI | GCAATG | 2 cut(s) | 63, 101 |
| BseDI | CCNNGG | 1 cut(s) | 308 |
| BseGI | GGATG | 2 cut(s) | 450, 466 |
| BseMI | GCAATG | 2 cut(s) | 63, 101 |
| BseMII | CTCAG | 2 cut(s) | 123, 172 |
| BseRI | GAGGAG | 2 cut(s) | 161, 328 |
| BseXI | GCAGC | 1 cut(s) | 508 |
| BshFI | GGCC | 2 cut(s) | 87, 363 |
| BsmAI | GTCTC | 4 cut(s) | 86, 222, 224, 312 |
| BsmBI | CGTCTC | 1 cut(s) | 86 |
| BsnI | GGCC | 2 cut(s) | 87, 363 |
| BspACI | CCGC | 2 cut(s) | 273, 294 |
| BspANI | GGCC | 2 cut(s) | 87, 363 |
| BspCNI | CTCAG | 2 cut(s) | 122, 171 |
| BsrDI | GCAATG | 2 cut(s) | 63, 101 |
| BssECI | CCNNGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 1 cut(s) | 489 |
| Bst6I | CTCTTC | 3 cut(s) | 152, 328, 499 |
| BstC8I | GCNNGC | 1 cut(s) | 469 |
| BstDEI | CTNAG | 2 cut(s) | 109, 158 |
| BstDSI | CCRYGG | 1 cut(s) | 308 |
| BstF5I | GGATG | 2 cut(s) | 450, 466 |
| BstMAI | GTCTC | 4 cut(s) | 86, 222, 224, 312 |
| BstV1I | GCAGC | 1 cut(s) | 508 |
| BstV2I | GAAGAC | 1 cut(s) | 346 |
| BsuRI | GGCC | 2 cut(s) | 87, 363 |
| BtgI | CCRYGG | 1 cut(s) | 308 |
| BtsCI | GGATG | 2 cut(s) | 450, 466 |
| Cac8I | GCNNGC | 1 cut(s) | 469 |
| CseI | GACGC | 1 cut(s) | 340 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 280, 315 |
| CviAII | CATG | 1 cut(s) | 431 |
| DdeI | CTNAG | 2 cut(s) | 109, 158 |
| DraI | TTTAAA | 1 cut(s) | 256 |
| EaeI | YGGCCR | 1 cut(s) | 361 |
| Eam1104I | CTCTTC | 3 cut(s) | 152, 328, 499 |
| EarI | CTCTTC | 3 cut(s) | 152, 328, 499 |
| EciI | GGCGGA | 1 cut(s) | 288 |
| Esp3I | CGTCTC | 1 cut(s) | 86 |
| FaeI | CATG | 1 cut(s) | 434 |
| FaiI | YATR | 3 cut(s) | 432, 480, 482 |
| FatI | CATG | 1 cut(s) | 430 |
| FauNDI | CATATG | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 1 cut(s) | 522 |
| FokI | GGATG | 2 cut(s) | 457, 473 |
| Fsp4HI | GCNGC | 1 cut(s) | 522 |
| GluI | GCNGC | 1 cut(s) | 522 |
| HaeIII | GGCC | 2 cut(s) | 87, 363 |
| HgaI | GACGC | 1 cut(s) | 340 |
| Hin1II | CATG | 1 cut(s) | 434 |
| HindIII | AAGCTT | 1 cut(s) | 402 |
| HinfI | GANTC | 3 cut(s) | 232, 281, 320 |
| HphI | GGTGA | 5 cut(s) | 90, 109, 125, 133, 227 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 265, 444 |
| Hpy188III | TCNNGA | 2 cut(s) | 15, 375 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| Hpy99I | CGWCG | 1 cut(s) | 226 |
| HpyAV | CCTTC | 2 cut(s) | 337, 443 |
| HpyCH4III | ACNGT | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 2 cut(s) | 109, 158 |
| Hsp92II | CATG | 1 cut(s) | 434 |
| LmnI | GCTCC | 1 cut(s) | 275 |
| LpnPI | CCDG | 2 cut(s) | 388, 481 |
| Lsp1109I | GCAGC | 1 cut(s) | 508 |
| MboII | GAAGA | 7 cut(s) | 139, 237, 252, 315, 322, 346, 516 |
| MfeI | CAATTG | 1 cut(s) | 346 |
| MluCI | AATT | 2 cut(s) | 346, 391 |
| MlyI | GAGTC | 2 cut(s) | 226, 314 |
| MseI | TTAA | 2 cut(s) | 255, 303 |
| MunI | CAATTG | 1 cut(s) | 346 |
| NdeI | CATATG | 1 cut(s) | 480 |
| NlaIII | CATG | 1 cut(s) | 434 |
| NmeAIII | GCCGAG | 1 cut(s) | 63 |
| PfeI | GAWTC | 1 cut(s) | 281 |
| PkrI | GCNGC | 1 cut(s) | 523 |
| PleI | GAGTC | 2 cut(s) | 226, 314 |
| PpsI | GAGTC | 2 cut(s) | 226, 314 |
| SaqAI | TTAA | 2 cut(s) | 255, 303 |
| SatI | GCNGC | 1 cut(s) | 522 |
| SchI | GAGTC | 2 cut(s) | 226, 314 |
| SetI | ASST | 4 cut(s) | 38, 280, 406, 523 |
| Sse9I | AATT | 2 cut(s) | 346, 391 |
| SsiI | CCGC | 2 cut(s) | 273, 294 |
| TaaI | ACNGT | 1 cut(s) | 489 |
| TaqI | TCGA | 3 cut(s) | 150, 196, 224 |
| TasI | AATT | 2 cut(s) | 346, 391 |
| TfiI | GAWTC | 1 cut(s) | 281 |
| Tru1I | TTAA | 2 cut(s) | 255, 303 |
| Tru9I | TTAA | 2 cut(s) | 255, 303 |
| TseI | GCWGC | 1 cut(s) | 521 |
| TspDTI | ATGAA | 2 cut(s) | 396, 477 |
| TspGWI | ACGGA | 2 cut(s) | 210, 325 |