Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000871

Physical Location & Seq

Genomic Coordinates Reverse (-)

32169105 .. 32170895

Gene Structure 1791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0223900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGAAAGACCAACTATGGAGATGGAGCTCCTTGGAAAGAAAATGCTTATTCCTTCTCCAACAAGCCAACACAACACCACCCTCTCTTCTCCAAATCCACGCCTTCATCCTCCGAAACGCCCTCGAAACCAACCTCAATCTCCTCACCAAATTCATCACCACCTGCTCCTCCTCCTCCTCCCCCTCATACCTGATCAAACACGCCCGCCGCGTCCTCGATCACCAACCCAATAAGCATGACACGTTTCTCTGCAACGCTATGATCAGTGCCCACATGGCCCAATTCGCCGAGTCTTTCGCTCTTTATAGAGATCTTAGACAGGACACAGGTTTCAAGCCGGATGGGTACACGTTCACGGCTCTGGCCAAGTCGTGCGGGTTAGATGGGGATAGATCAGAAGGAGAAGAGATTCATTGTCATGCTGTTAAGACTGGGCTGTGTTTGGATTTGTACGTTTCGACGTCTTTGGTTGACATGTATGTGAAGTTTGGGACGATGGGTTGTGCAAGGAAGGTGTTTGATGAAATGACTGAGAGAAATATAGTGTCGTGGACGGCTCTTGTTTGCGGGTATGCGAGGACGGGAGATATGGATAGTGCGAGGAGGCTTTTTGATGAAATGCCTAAGAGGGACTCGGCCGCGTTTAATGCGTTGATTGATGAATATGTCAAGTTGGGGGAAATGGGCTCGGCTCGAAGTTTGTTTGATGAGATGAGGGATAGGAATGTGGTGACTTGGACTAGTATGATATACGGTTACTGCCATCAAGGTGATGTAGAGGCCGCTAAATCACTCTTTGATTCTATGCCCAAGAAGAATCTTATTTCTTGGAATGTGATGATTGGTGGTTATTGCCAAAACAAACGTCCCCATGAAGCCGTGAGATTGTTTCATGAAATGCAGTCAACTACATCGCTTGAACCAGATGCTGTAACGGTTGTGAGCATTCTTCCGGCTATAGCTGATTTGGGTGCTTTGGATTTAGGGCATTGGGTTCACGAGTTTGTACAGAGGAAGAAGCTTGATAGGCTAACCAATATATGCACTGCGCTTGTGGATATGTATGCAAAATGTGGTGAAATAAAAAAGGCCAAAAGACTCTTTGATGAGATGCCTGAAAAAGAAACGGCTTCTTGGAATGCTTTGATAAATGGGTTTGCAGTCAATGGCTATGGAAAGGAGGCACTAGAGGTATTTTTAGAGATGCAACGAGAAAAGTTTAAGCCTAACAATATAACCTTTGTCGGTGTTCTGTCCGCTTGTAACCATTGTGGTCTGGTAGAGGAAGGGAAATTTTGGTTTAGGAAAATGGAAAACTTTGGGCTCATTCCACAGATTGAGCATTATGGTTGTATGGTAGATCTTTTAGGAAGGGCAGGGTGCTTGGAGGAAGCTGAGAAGTTGATCAAGAGCATGCCTTACGATGTTAATGGGATAATTTTGAGTTCCTTTCTTTTTGCATGTGGGTATTGTGAGGATGTCACGAGAGCCAACAAAACTTTAGAGCAGGCTGTCAAACTGGAGCCATGGAATTATGGAAATTATGTTATGTTGAGAAATTTGTATGCCAGAAACAGAAGGTGGAGTGATGCAGATAATATTAAGAGTTCGATGCGGAAGAATCAAGCAGATAAAGAGGTTGGTTGTAGTGTTATAGAGGTTGATGGTAGAATCAAGCAGTTTGTGGCTGGGGACAGGATGTACACATCTTCAGAAGCTATACATTTGACCTTGCTACAGAGTTGGAAGCACATGATGGGACAAGTCCCATGTTCTATAGCTAAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0006862 GO:0008150 GO:0008509 GO:0008514 GO:0012505 GO:0015075 GO:0015215 GO:0015216 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0030173 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031228 GO:0031300 GO:0031301 GO:0031984 GO:0034220 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046963 GO:0046964 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0071702 GO:0071705 GO:0072348 GO:0072530 GO:0098588 GO:0098656 GO:0098791 GO:0098827 GO:1901264 GO:1901505 GO:1901679 GO:1901682 GO:1902559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UAA

Protein Analysis

596

Amino Acids

67.62

Weight (kDa)

6.95

Isoelectric Point (pI)

45.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 210	7.4e-07	PPR repeat family
PPR	PF01535	182 - 210	3.8e-07	PPR repeat
PPR_2	PF13041	211 - 243	4.4e-06	PPR repeat family
PPR_2	PF13041	241 - 274	4.3e-09	PPR repeat family
PPR_1	PF12854	242 - 269	1.5e-07	PPR repeat
PPR	PF01535	244 - 273	1.1e-08	PPR repeat
PPR_2	PF13041	273 - 317	1.8e-10	PPR repeat family
PPR_1	PF12854	273 - 301	9.5e-07	PPR repeat
PPR	PF01535	275 - 302	7.9e-09	PPR repeat
PPR_2	PF13041	376 - 421	1.6e-10	PPR repeat family
PPR	PF01535	378 - 406	8.9e-08	PPR repeat
E_motif	PF20431	493 - 553	1.7e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000871)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12600 AT4G23010 AT4G23010 AT4G23010
fragaria_vesca	FvH4_5g01421 FvH4_5g01421 FvH4_7g12950 FvH4_7g12950 FvH4_7g12950
malus_domestica	MD02G1194900.v1.1 MD04G1068500.v1.1 MD07G1125700.v1.1
prunus_persica	Prupe.2G153800_v2.0.a1 Prupe.5G089700_v2.0.a1 Prupe.5G089700_v2.0.a1
pyrus_communis	pycom02g15880 pycom04g06180 pycom07g11930
rosa_chinensis	RchiOBHm_Chr0c16g0499921 RchiOBHm_Chr1g0347281 RchiOBHm_Chr1g0352081 RchiOBHm_Chr3g0455881 RchiOBHm_Chr4g0437881 RchiOBHm_Chr7g0199431
rosa_laevigata	RLG00000002748 RLG00000003793 RLG00000006404 RLG00000028361
rosa_multiflora	Rmu_sc0002453.1_g000013 Rmu_sc0002464.1_g000008 Rmu_sc0003781.1_g000011 Rmu_sc0008907.1_g000006 Rmu_sc0010560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256730 Rroxscaffold_4G00303280 Rroxscaffold_5G00361360
rosa_rugosa	Rorug01G0080000 Rorug01G0223900 Rorug01G0224000 Rorug01G0224100 Rorug02G0308800 Rorug02G0308900 Rorug02G0309000 Rorug02G0515400 Rorug04G0305100 Rorug06G0238700 Rorug06G0238800 Rorug06G0238900 Rorug06G0239000 Rorug07G0053800 Rorug07G0053900.1 Rorug07G0054000
rosa_samantha	Rh1CG222900 Rh4BG367900 Rh4CG154300 Rh4CG381900 Rh4DG362500 Rh6BG359000 Rh6DG293200 Rh7AG179000 Rh7CG187600 Rh7DG181900
rosa_wichuraiana	Rw0G011570 Rw1G020720 Rw5G045820 Rw7G015720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	170
AatII	GACGTC	1 cut(s)	464
Acc36I	ACCTGC	1 cut(s)	170
AccII	CGCG	2 cut(s)	210, 641
AciI	CCGC	8 cut(s)	205, 208, 375, 567, 639, 783, 1257, 1615
AcoI	YGGCCR	2 cut(s)	363, 636
AcsI	RAATTY	3 cut(s)	149, 1292, 1558
AcuI	CTGAAG	1 cut(s)	1695
AcyI	GRCGYC	1 cut(s)	461
AfaI	GTAC	4 cut(s)	347, 452, 1008, 1703
AflIII	ACRYGT	3 cut(s)	240, 348, 474
AgsI	TTSAA	2 cut(s)	334, 920
AhlI	ACTAGT	1 cut(s)	740
AluBI	AGCT	6 cut(s)	27, 962, 1021, 1394, 1718, 1781
AluI	AGCT	6 cut(s)	27, 962, 1021, 1394, 1718, 1781
Alw21I	GWGCWC	1 cut(s)	29
AlwNI	CAGNNNCTG	1 cut(s)	929
AoxI	GGCC	5 cut(s)	276, 363, 636, 780, 1089
ApoI	RAATTY	3 cut(s)	149, 1292, 1558
ArsI	GACNNNNNNTTYG	2 cut(s)	850, 882
Asp700I	GAANNNNTTC	1 cut(s)	408
AspLEI	GCGC	1 cut(s)	1051
AspS9I	GGNCC	1 cut(s)	277
AsuHPI	GGTGA	6 cut(s)	136, 148, 212, 742, 782, 1088
BaeGI	GKGCMC	1 cut(s)	271
BalI	TGGCCA	1 cut(s)	365
BanII	GRGCYC	3 cut(s)	29, 689, 1326
BauI	CACGAG	2 cut(s)	998, 1483
Bbv12I	GWGCWC	1 cut(s)	29
BccI	CCATC	7 cut(s)	15, 335, 377, 490, 771, 1658, 1750
BceAI	ACGGC	4 cut(s)	372, 570, 863, 1143
BclI	TGATCA	3 cut(s)	192, 261, 1404
BcuI	ACTAGT	1 cut(s)	740
BfaI	CTAG	2 cut(s)	741, 1187
BfmI	CTRYAG	3 cut(s)	957, 1736, 1776
BfuAI	ACCTGC	1 cut(s)	170
BglI	GCCNNNNNGGC	1 cut(s)	275
BglII	AGATCT	2 cut(s)	310, 1360
BisI	GCNGC	3 cut(s)	208, 639, 783
BlsI	GCNGC	3 cut(s)	209, 640, 784
BmgT120I	GGNCC	1 cut(s)	277
BmiI	GGNNCC	1 cut(s)	1524
BmrI	ACTGGG	1 cut(s)	441
BmsI	GCATC	5 cut(s)	916, 1101, 1194, 1579, 1602
BmuI	ACTGGG	1 cut(s)	441
BpmI	CTGGAG	1 cut(s)	1541
Bpu10I	CCTNAGC	1 cut(s)	1782
BsaHI	GRCGYC	1 cut(s)	461
BsaJI	CCNNGG	2 cut(s)	30, 1526
Bse1I	ACTGG	2 cut(s)	436, 1524
BseDI	CCNNGG	2 cut(s)	30, 1526
BseGI	GGATG	4 cut(s)	105, 346, 1483, 1704
BseMII	CTCAG	2 cut(s)	522, 1386
BseNI	ACTGG	2 cut(s)	436, 1524
BseRI	GAGGAG	6 cut(s)	131, 157, 160, 163, 166, 616
BseSI	GKGCMC	1 cut(s)	271
BseX3I	CGGCCG	1 cut(s)	636
BseYI	CCCAGC	1 cut(s)	1688
Bsh1236I	CGCG	2 cut(s)	210, 641
Bsh1285I	CGRYCG	1 cut(s)	639
BshFI	GGCC	5 cut(s)	278, 365, 638, 782, 1091
BsiEI	CGRYCG	1 cut(s)	639
BsiHKAI	GWGCWC	1 cut(s)	29
BsiSI	CCGG	2 cut(s)	338, 953
BslFI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
BsmFI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
BsmI	GAATGC	2 cut(s)	945, 1144
BsnI	GGCC	5 cut(s)	278, 365, 638, 782, 1091
Bsp1286I	GDGCHC	4 cut(s)	29, 271, 689, 1326
Bsp1407I	TGTACA	2 cut(s)	1006, 1701
Bsp143I	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
Bsp19I	CCATGG	1 cut(s)	1526
BspACI	CCGC	8 cut(s)	205, 208, 375, 567, 639, 783, 1257, 1615
BspANI	GGCC	5 cut(s)	278, 365, 638, 782, 1091
BspCNI	CTCAG	2 cut(s)	523, 1387
BspFNI	CGCG	2 cut(s)	210, 641
BspHI	TCATGA	1 cut(s)	892
BspLI	GGNNCC	1 cut(s)	1524
BspMI	ACCTGC	1 cut(s)	170
BsrGI	TGTACA	2 cut(s)	1006, 1701
BsrI	ACTGG	2 cut(s)	436, 1524
BssECI	CCNNGG	2 cut(s)	30, 1526
BssMI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
BssNI	GRCGYC	1 cut(s)	461
BssSI	CACGAG	2 cut(s)	998, 1483
BssT1I	CCWWGG	2 cut(s)	30, 1526
Bst2BI	CACGAG	2 cut(s)	998, 1483
Bst4CI	ACNGT	2 cut(s)	755, 937
Bst6I	CTCTTC	2 cut(s)	90, 399
BstACI	GRCGYC	1 cut(s)	461
BstAUI	TGTACA	2 cut(s)	1006, 1701
BstC8I	GCNNGC	3 cut(s)	205, 1415, 1509
BstDEI	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
BstDSI	CCRYGG	1 cut(s)	1526
BstF5I	GGATG	4 cut(s)	105, 346, 1483, 1704
BstFNI	CGCG	2 cut(s)	210, 641
BstHHI	GCGC	1 cut(s)	1051
BstKTI	GATC	7 cut(s)	195, 220, 264, 313, 395, 1363, 1407
BstMBI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
BstMCI	CGRYCG	1 cut(s)	639
BstMWI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
BstNSI	RCATGY	3 cut(s)	478, 1417, 1464
BstSFI	CTRYAG	3 cut(s)	957, 1736, 1776
BstSLI	GKGCMC	1 cut(s)	271
BstUI	CGCG	2 cut(s)	210, 641
BstX2I	RGATCY	2 cut(s)	310, 1360
BstYI	RGATCY	2 cut(s)	310, 1360
BstZI	CGGCCG	1 cut(s)	636
BsuRI	GGCC	5 cut(s)	278, 365, 638, 782, 1091
BtgI	CCRYGG	1 cut(s)	1526
BtgZI	GCGATG	1 cut(s)	897
BtsCI	GGATG	4 cut(s)	105, 346, 1483, 1704
BtsI	GCAGTG	1 cut(s)	1044
BtsIMutI	CAGTG	2 cut(s)	271, 1044
BveI	ACCTGC	1 cut(s)	170
Cac8I	GCNNGC	3 cut(s)	205, 1415, 1509
CaiI	CAGNNNCTG	1 cut(s)	929
CciI	TCATGA	1 cut(s)	892
CfoI	GCGC	1 cut(s)	1051
Cfr13I	GGNCC	1 cut(s)	277
CseI	GACGC	1 cut(s)	199
Csp6I	GTAC	4 cut(s)	346, 451, 1007, 1702
CviQI	GTAC	4 cut(s)	346, 451, 1007, 1702
DdeI	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
DpnI	GATC	7 cut(s)	194, 219, 263, 312, 394, 1362, 1406
DpnII	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
EaeI	YGGCCR	2 cut(s)	363, 636
EagI	CGGCCG	1 cut(s)	636
Eam1104I	CTCTTC	2 cut(s)	90, 399
EarI	CTCTTC	2 cut(s)	90, 399
Ecl136II	GAGCTC	1 cut(s)	27
EclXI	CGGCCG	1 cut(s)	636
Eco130I	CCWWGG	2 cut(s)	30, 1526
Eco24I	GRGCYC	3 cut(s)	29, 689, 1326
Eco52I	CGGCCG	1 cut(s)	636
Eco53kI	GAGCTC	1 cut(s)	27
Eco57I	CTGAAG	1 cut(s)	1695
EcoICRI	GAGCTC	1 cut(s)	27
EcoT14I	CCWWGG	2 cut(s)	30, 1526
EcoT38I	GRGCYC	3 cut(s)	29, 689, 1326
ErhI	CCWWGG	2 cut(s)	30, 1526
FaqI	GGGAC	6 cut(s)	505, 644, 852, 1706, 1751, 1773
FauI	CCCGC	3 cut(s)	212, 368, 560
FbaI	TGATCA	3 cut(s)	192, 261, 1404
Fnu4HI	GCNGC	3 cut(s)	208, 639, 783
FokI	GGATG	4 cut(s)	92, 353, 1490, 1711
FriOI	GRGCYC	3 cut(s)	29, 689, 1326
Fsp4HI	GCNGC	3 cut(s)	208, 639, 783
FspBI	CTAG	2 cut(s)	741, 1187
GlaI	GCGC	1 cut(s)	1050
GluI	GCNGC	3 cut(s)	208, 639, 783
GsaI	CCCAGC	1 cut(s)	1692
GsuI	CTGGAG	1 cut(s)	1541
HaeIII	GGCC	5 cut(s)	278, 365, 638, 782, 1091
HapII	CCGG	2 cut(s)	338, 953
HgaI	GACGC	1 cut(s)	199
HhaI	GCGC	1 cut(s)	1051
Hin1I	GRCGYC	1 cut(s)	461
Hin6I	GCGC	1 cut(s)	1049
HinP1I	GCGC	1 cut(s)	1049
HincII	GTYRAC	2 cut(s)	472, 906
HindII	GTYRAC	2 cut(s)	472, 906
HindIII	AAGCTT	1 cut(s)	1019
HinfI	GANTC	8 cut(s)	290, 409, 632, 800, 817, 1098, 1621, 1671
HpaII	CCGG	2 cut(s)	338, 953
HphI	GGTGA	6 cut(s)	136, 148, 212, 742, 782, 1088
Hpy166II	GTNNAC	7 cut(s)	348, 354, 472, 552, 906, 997, 1704
Hpy188I	TCNGA	3 cut(s)	113, 397, 1714
Hpy188III	TCNNGA	4 cut(s)	893, 998, 1408, 1483
Hpy8I	GTNNAC	7 cut(s)	348, 354, 472, 552, 906, 997, 1704
Hpy99I	CGWCG	1 cut(s)	463
HpyAV	CCTTC	7 cut(s)	62, 112, 392, 505, 1280, 1365, 1572
HpyCH4III	ACNGT	2 cut(s)	755, 937
HpyCH4IV	ACGT	5 cut(s)	242, 350, 453, 461, 865
HpyCH4V	TGCA	9 cut(s)	252, 506, 901, 1044, 1067, 1160, 1207, 1460, 1592
HpyF10VI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
HpyF3I	CTNAG	5 cut(s)	314, 531, 624, 1395, 1782
HpySE526I	ACGT	5 cut(s)	242, 350, 453, 461, 865
Hsp92I	GRCGYC	1 cut(s)	461
HspAI	GCGC	1 cut(s)	1049
Ksp22I	TGATCA	3 cut(s)	192, 261, 1404
Kzo9I	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
LmnI	GCTCC	4 cut(s)	24, 32, 170, 1522
LweI	GCATC	5 cut(s)	916, 1101, 1194, 1579, 1602
MaeI	CTAG	2 cut(s)	741, 1187
MaeII	ACGT	5 cut(s)	242, 350, 453, 461, 865
MaeIII	GTNAC	5 cut(s)	730, 755, 931, 1262, 1480
MalI	GATC	7 cut(s)	194, 219, 263, 312, 394, 1362, 1406
MboI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
MboII	GAAGA	7 cut(s)	77, 416, 826, 941, 1027, 1630, 1701
MflI	RGATCY	2 cut(s)	310, 1360
MhlI	GDGCHC	4 cut(s)	29, 271, 689, 1326
MlsI	TGGCCA	1 cut(s)	365
MluCI	AATT	7 cut(s)	149, 281, 1292, 1437, 1531, 1540, 1558
MluNI	TGGCCA	1 cut(s)	365
MlyI	GAGTC	3 cut(s)	299, 626, 1092
MmeI	TCCRAC	2 cut(s)	82, 1724
Mox20I	TGGCCA	1 cut(s)	365
MroXI	GAANNNNTTC	1 cut(s)	408
MscI	TGGCCA	1 cut(s)	365
MseI	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
MslI	CAYNNNNRTG	3 cut(s)	417, 479, 768
Msp20I	TGGCCA	1 cut(s)	365
MspI	CCGG	2 cut(s)	338, 953
Mva1269I	GAATGC	2 cut(s)	945, 1144
MvnI	CGCG	2 cut(s)	210, 641
MwoI	GCNNNNNNNGC	4 cut(s)	275, 284, 647, 1027
NcoI	CCATGG	1 cut(s)	1526
NdeII	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
NlaIV	GGNNCC	1 cut(s)	1524
NmeAIII	GCCGAG	3 cut(s)	313, 614, 668
NmuCI	GTSAC	2 cut(s)	730, 1480
NspI	RCATGY	3 cut(s)	478, 1417, 1464
PaeI	GCATGC	1 cut(s)	1417
PagI	TCATGA	1 cut(s)	892
PaqCI	CACCTGC	1 cut(s)	170
PciI	ACATGT	1 cut(s)	474
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PctI	GAATGC	2 cut(s)	945, 1144
PdmI	GAANNNNTTC	1 cut(s)	408
PfeI	GAWTC	5 cut(s)	409, 800, 817, 1621, 1671
PkrI	GCNGC	3 cut(s)	209, 640, 784
PleI	GAGTC	3 cut(s)	298, 626, 1092
PpsI	GAGTC	3 cut(s)	298, 626, 1092
PscI	ACATGT	1 cut(s)	474
Psp124BI	GAGCTC	1 cut(s)	29
PspFI	CCCAGC	1 cut(s)	1688
PspN4I	GGNNCC	1 cut(s)	1524
PspPI	GGNCC	1 cut(s)	277
PstNI	CAGNNNCTG	1 cut(s)	929
PsuI	RGATCY	2 cut(s)	310, 1360
RsaI	GTAC	4 cut(s)	347, 452, 1008, 1703
RsaNI	GTAC	4 cut(s)	346, 451, 1007, 1702
RseI	CAYNNNNRTG	3 cut(s)	417, 479, 768
SacI	GAGCTC	1 cut(s)	29
SaqAI	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
SatI	GCNGC	3 cut(s)	208, 639, 783
Sau3AI	GATC	7 cut(s)	192, 217, 261, 310, 392, 1360, 1404
Sau96I	GGNCC	1 cut(s)	277
SchI	GAGTC	3 cut(s)	299, 626, 1092
SduI	GDGCHC	4 cut(s)	29, 271, 689, 1326
SfaNI	GCATC	5 cut(s)	916, 1101, 1194, 1579, 1602
SfcI	CTRYAG	3 cut(s)	957, 1736, 1776
SmiMI	CAYNNNNRTG	3 cut(s)	417, 479, 768
SpeI	ACTAGT	1 cut(s)	740
SphI	GCATGC	1 cut(s)	1417
Sse9I	AATT	7 cut(s)	149, 281, 1292, 1437, 1531, 1540, 1558
SsiI	CCGC	8 cut(s)	205, 208, 375, 567, 639, 783, 1257, 1615
SspI	AATATT	1 cut(s)	1600
SspMI	CTAG	2 cut(s)	741, 1187
SstI	GAGCTC	1 cut(s)	29
StyI	CCWWGG	2 cut(s)	30, 1526
TaaI	ACNGT	2 cut(s)	755, 937
TaiI	ACGT	5 cut(s)	245, 353, 456, 464, 868
TaqI	TCGA	5 cut(s)	123, 216, 458, 694, 1610
TasI	AATT	7 cut(s)	149, 281, 1292, 1437, 1531, 1540, 1558
TatI	WGTACW	2 cut(s)	1006, 1701
TauI	GCSGC	3 cut(s)	210, 641, 785
TfiI	GAWTC	5 cut(s)	409, 800, 817, 1621, 1671
Tru1I	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
Tru9I	TTAA	5 cut(s)	426, 645, 1221, 1428, 1602
TscAI	CASTG	2 cut(s)	271, 1051
TseFI	GTSAC	2 cut(s)	730, 1480
Tsp45I	GTSAC	2 cut(s)	730, 1480
TspRI	CASTG	2 cut(s)	271, 1051
XapI	RAATTY	3 cut(s)	149, 1292, 1558
XceI	RCATGY	3 cut(s)	478, 1417, 1464
XmnI	GAANNNNTTC	1 cut(s)	408
XspI	CTAG	2 cut(s)	741, 1187
ZraI	GACGTC	1 cut(s)	462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.