Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000871

Physical Location & Seq

Genomic Coordinates Forward (+)

32207784 .. 32210942

Gene Structure 3159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0224100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2940 bp

ATGGGTTTTTCCATGTGTGCGCTTTCAAAACTAGTCCTGTTTTTAGTTTATGTTGTGGTTGCTAACTCTTTTTCACCTTTGCATTCCTATTCTTGCCATGATGAGGAGAGATCTGCCTTGCTGCAGTTCAAGGAGAGCTTGATTATCGACAAACGTGCTTCGGTTGTTGGTGCTTATCCAAAGGTTTCATCATGGAAACCAGAGGAGGGGAAAAGTAAGAACTGCTGCTCATGGGACGGTGTCGAGTGTGATGAGAAGACAGGTTATGTGATTGGCCTTGATCTCAGTAGCAGTTGTCTCTATGGCTCTATCAACTCCAGTAATAGCCTCTTTCGTCTTGTTCATCTTCAGAGGTTGAACCTCGCTGATAACAATTTCAATTACTCTCAAATTCCTACTGGCATTAGGAACTTTCCGATGCTCAGTTATCTCAACCTCTCTGCCTCTGTCTTTTTTGGTGAAGTCCCATCCGAAGTTTCGCAGTTGTCCAAGTTGTCATTTCTTGATCTTTCTTTCAATGTTGATGTATTTACTATGACTGAAGGCTTGTTAAAACTTAGAGAGTCCAATTTCAGAAGTCTAGTTCAAAACTTAACCAGTCTAGAAAAGCTTCATCTCAGTCTCGTCAACATATCTTCCAGCATACCCGATTCCATGGCAAATTTATCATTCTTGTCATCTCTCCTCCTCAGAGGTTGTGACTTGTTTGGCGAATTCCCTGTAGGTATTTTGAAACTACAGAACTTAGAGACTCTTGATCTGAGATCCAACCAATATCTCACTGGTTATTTGCCTGAATTTCATCCGAGCAGTCCTCTCATGTCGCTGAAACTTGGTAGCACTAGCTTTTCGGGGAACTTGTCTTCAATTGAAAAGCTTGATTCATTGAAAGAGTTGGAAGTTCAATCGTGCAACTTTAGTGGTCCAATTGTTCAGTTGGCAAACCTTACCCAACTCACATACTTGGCACTTTCTAACAATAATTTTACTGGTGGTTCCTTGTCTTGGATTGGAAAGCTAACTAAACTTACTTATCTGCGTCTTGAAAACATCAACTTAAGTGGTTACATCCCCTCTTCTCTTCGAAACCTCACACAACTCTTCTATCTTCATGTTCATTACAATCAACTAACTGGTCCAATCCCATCTTGGATAGGTAACCTTAGCAGCCTAGCTTACATAGATCTTTCTTCCAATAGATTGCATGGTTCAATTCCTGACTCAATATTCAATCTTATAGATCTTCAAATCCTTTTTCTGCATCAAAATAGTCTGCATGGCACTGTGGATATTCTTAAGCTACAAAGTGTCACCCACCTCCAACTATCTGTTAACAAATTCAATGTTGTCACAGAATCCAGAATTACAAATGCAACTTTTCCGAATTTTGCTGTCCTTGGATTGAGTTCGTGCAACATAAAAGAATTTCCATATTTTCTAAGATATCAACAAAACTTGTTCTGGCTGGACCTTTCTAGCAACAAATTGCAGGGCCACATACCCAAATGGGTGTGGAACATGAGCACAGAAGCTCTGGAGTTCATTGACATTTCTGGAAATTTCCTTTCTGGATTTGAGCAACCACTGCCAGCTGTCCTCCCTTGGGTTAATCTACAAATTTTATGGCTTTCCAAAAACAAGCTGCATGGTTCACTACCCATACCTCACCCAAACATCTTGTATTATGCCATTTCGGACAATGAATTATCTGGAGAACTTTCACCATTGATTTGCAGTCTGAATAATCTTCAGTTCCTTGACTTGGCAAATAACAAGTTGAGTGGCACGCTTCCTCGGTGTCTTGGAAACTTCAGTGATGTCCTACAAGCTTTAGATCTCGGAAACAACTCCTTTCATGGCATTCTTCCTCAAACGTACAGCACCACAAGCAAACTGGGGATGATTAATGTTCGTGATAACAAGTTGCAGGGGGATTTACCAACGTCATTGGCAAATTGTGTGATGCTTGAGTTTTTGGATCTGTCAAACAATGAGTTCAGTGATGTTTTCCCTTTTTGGTTGGGGGCACTCCAAGAGTTGAAACTTTTGGCAATGAACCACAATGCGTTCTATGGTCTGATTGGGACACCTGAAAAGAAACTTAATTTCTCTTTCCCCAAGTTGAGGATTCTTGATCTCTCTTACAATAAGTTCACAGGTGAGTTTCCATCCAAATACATCTTTTCTGGGAATTCCATGAGAGGTATCACTCTAAACCAGTCCACATACATGGACACATCCTCACATCTTCAACCCGGTGGTACACCAAAGACTTTTAGCTATGGTTTCTCAGCCATGATAACAACTAAAGGTGTTGACAGATACTACCCACGGATTCAAGAAGACTTTGCTTCTGTTGATCTCTCAAGTAACAGATTTGAAGGGAAGATTCCAGACTTCATTGGGAATCTAAAGGGACTTCACTCTCTCAACATTTCCAATAACATCCTCACTGGTCGAATCCCAGCATCCCTGGGGAACTTAATACAGCTCGAGTCCTTGGACCTTTCACAAAACAAGCTCTCAGGAGAGATTCCTCAGCAACTTACGCAGATTCCATCACTCGGAACTTTCAAGGTCTCTAACAACAGTCTCACAGGTTCTATACCACAAGGGCAGCAATTTAATACATTTGACAGCAGTTCGTATGAGGGGAACCCAGGATTGTGTGGAGATCCATTGCCAAAGAAATGTGGAAATCCTAAAGCTCCTCAACCACCACCTTCGACTGAAAAAGAAAGTGATTCAGGCTCTGGAGTTGAAGTTGATTGGAAATTTGTTTGGGCAGGATTTGGAAGTGGGTTGTTAGTGGGAGTGGTTCTTGCGGATGTTCTGATCACAAGGAGGCCTGAATCATTCATAATGATTGTGGGAATCTGTAGGACATTAATGGAAGGTCGACGAAGGCCTAGAAAGCAGAATAGGAGACACAAACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0006862 GO:0008150 GO:0008509 GO:0008514 GO:0012505 GO:0015075 GO:0015215 GO:0015216 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0030173 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031228 GO:0031300 GO:0031301 GO:0031984 GO:0034220 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046963 GO:0046964 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0071702 GO:0071705 GO:0072348 GO:0072530 GO:0098588 GO:0098656 GO:0098791 GO:0098827 GO:1901264 GO:1901505 GO:1901679 GO:1901682 GO:1902559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UAA

Protein Analysis

979

Amino Acids

108.85

Weight (kDa)

7.02

Isoelectric Point (pI)

42.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	33 - 84	2.2e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	93 - 227	1.1e-08	Leucine-rich repeat region
LRR_14	PF23598	221 - 346	6.6e-06	Leucine-rich repeat region
LRR_14	PF23598	287 - 493	1.4e-10	Leucine-rich repeat region
LRR_8	PF13855	318 - 377	6.1e-07	Leucine rich repeat
LRR_8	PF13855	608 - 665	5e-07	Leucine rich repeat
LRR_8	PF13855	785 - 841	5.8e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000871)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12600 AT4G23010 AT4G23010 AT4G23010
fragaria_vesca	FvH4_5g01421 FvH4_5g01421 FvH4_7g12950 FvH4_7g12950 FvH4_7g12950
malus_domestica	MD02G1194900.v1.1 MD04G1068500.v1.1 MD07G1125700.v1.1
prunus_persica	Prupe.2G153800_v2.0.a1 Prupe.5G089700_v2.0.a1 Prupe.5G089700_v2.0.a1
pyrus_communis	pycom02g15880 pycom04g06180 pycom07g11930
rosa_chinensis	RchiOBHm_Chr0c16g0499921 RchiOBHm_Chr1g0347281 RchiOBHm_Chr1g0352081 RchiOBHm_Chr3g0455881 RchiOBHm_Chr4g0437881 RchiOBHm_Chr7g0199431
rosa_laevigata	RLG00000002748 RLG00000003793 RLG00000006404 RLG00000028361
rosa_multiflora	Rmu_sc0002453.1_g000013 Rmu_sc0002464.1_g000008 Rmu_sc0003781.1_g000011 Rmu_sc0008907.1_g000006 Rmu_sc0010560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256730 Rroxscaffold_4G00303280 Rroxscaffold_5G00361360
rosa_rugosa	Rorug01G0080000 Rorug01G0223900 Rorug01G0224000 Rorug01G0224100 Rorug02G0308800 Rorug02G0308900 Rorug02G0309000 Rorug02G0515400 Rorug04G0305100 Rorug06G0238700 Rorug06G0238800 Rorug06G0238900 Rorug06G0239000 Rorug07G0053800 Rorug07G0053900.1 Rorug07G0054000
rosa_samantha	Rh1CG222900 Rh4BG367900 Rh4CG154300 Rh4CG381900 Rh4DG362500 Rh6BG359000 Rh6DG293200 Rh7AG179000 Rh7CG187600 Rh7DG181900
rosa_wichuraiana	Rw0G011570 Rw1G020720 Rw5G045820 Rw7G015720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	2899
AciI	CCGC	1 cut(s)	2825
AclI	AACGTT	1 cut(s)	2935
AclWI	GGATC	3 cut(s)	759, 1986, 2669
AcuI	CTGAAG	4 cut(s)	332, 561, 1733, 1795
AfaI	GTAC	2 cut(s)	1877, 2263
AfiI	CCNNNNNNNGG	7 cut(s)	103, 206, 1005, 1603, 1762, 2124, 2564
AflII	CTTAAG	2 cut(s)	1057, 1295
AhlI	ACTAGT	1 cut(s)	31
AjnI	CCWGG	2 cut(s)	2472, 2659
Alw21I	GWGCWC	1 cut(s)	1526
Alw26I	GTCTC	6 cut(s)	302, 626, 743, 2584, 2597, 2920
AlwI	GGATC	3 cut(s)	759, 1986, 2669
AlwNI	CAGNNNCTG	1 cut(s)	2753
Ama87I	CYCGRG	1 cut(s)	2492
AoxI	GGCC	4 cut(s)	274, 1492, 2846, 2906
ApeKI	GCWGC	5 cut(s)	121, 225, 1167, 1642, 2617
AseI	ATTAAT	2 cut(s)	1905, 2888
Asp700I	GAANNNNTTC	1 cut(s)	609
AspLEI	GCGC	1 cut(s)	22
AspS9I	GGNCC	5 cut(s)	923, 1136, 1468, 1492, 2503
AsuC2I	CCSGG	1 cut(s)	2256
AsuHPI	GGTGA	6 cut(s)	66, 470, 1303, 1658, 1713, 2171
AsuII	TTCGAA	1 cut(s)	1084
AvaI	CYCGRG	1 cut(s)	2492
AvaII	GGWCC	4 cut(s)	923, 1136, 1468, 2503
BaeGI	GKGCMC	1 cut(s)	2029
BbsI	GAAGAC	3 cut(s)	263, 855, 2349
Bbv12I	GWGCWC	1 cut(s)	1526
BbvCI	CCTCAGC	1 cut(s)	2538
BbvI	GCAGC	5 cut(s)	108, 212, 1179, 1629, 2629
BccI	CCATC	4 cut(s)	475, 1153, 2176, 2566
BcgI	CGANNNNNNTGC	2 cut(s)	137, 171
BciT130I	CCWGG	2 cut(s)	2474, 2661
BclI	TGATCA	1 cut(s)	2835
BcnI	CCSGG	1 cut(s)	2256
BcoDI	GTCTC	6 cut(s)	302, 626, 743, 2584, 2597, 2920
BcuI	ACTAGT	1 cut(s)	31
BfaI	CTAG	7 cut(s)	32, 581, 602, 843, 1172, 1476, 2910
BfmI	CTRYAG	4 cut(s)	122, 720, 737, 2878
BfrI	CTTAAG	2 cut(s)	1057, 1295
BglII	AGATCT	4 cut(s)	110, 1183, 1240, 1834
BisI	GCNGC	5 cut(s)	122, 226, 1168, 1643, 2618
BlsI	GCNGC	5 cut(s)	123, 227, 1169, 1644, 2619
Bme1390I	CCNGG	3 cut(s)	2256, 2474, 2661
Bme18I	GGWCC	4 cut(s)	923, 1136, 1468, 2503
BmeT110I	CYCGRG	1 cut(s)	2492
BmgT120I	GGNCC	5 cut(s)	923, 1136, 1468, 1492, 2503
BmiI	GGNNCC	2 cut(s)	997, 2657
BmrFI	CCNGG	3 cut(s)	2256, 2474, 2661
BmrI	ACTGGG	1 cut(s)	1904
BmsI	GCATC	4 cut(s)	408, 1270, 1953, 2477
BmuI	ACTGGG	1 cut(s)	1904
BpiI	GAAGAC	3 cut(s)	263, 855, 2349
BplI	GAGNNNNNCTC	2 cut(s)	799, 831
BpmI	CTGGAG	4 cut(s)	301, 1556, 1731, 2775
Bpu10I	CCTNAGC	2 cut(s)	1163, 2538
Bpu14I	TTCGAA	1 cut(s)	1084
BpuEI	CTTGAG	2 cut(s)	1988, 2350
BpuMI	CCSGG	1 cut(s)	2256
BsaI	GGTCTC	1 cut(s)	2584
BsaJI	CCNNGG	9 cut(s)	654, 1396, 1601, 1793, 2330, 2472, 2473, 2499, 2659
BsaXI	ACNNNNNCTCC	2 cut(s)	2748, 2778
Bsc4I	CCNNNNNNNGG	7 cut(s)	103, 206, 1005, 1603, 1762, 2124, 2564
Bse1I	ACTGG	9 cut(s)	318, 403, 597, 787, 994, 1138, 1899, 2218, 2458
Bse3DI	GCAATG	2 cut(s)	2058, 2678
BseBI	CCWGG	2 cut(s)	2474, 2661
BseDI	CCNNGG	9 cut(s)	654, 1396, 1601, 1793, 2330, 2472, 2473, 2499, 2659
BseGI	GGATG	9 cut(s)	467, 802, 1068, 1905, 2168, 2237, 2445, 2468, 2833
BseLI	CCNNNNNNNGG	7 cut(s)	103, 206, 1005, 1603, 1762, 2124, 2564
BseMI	GCAATG	2 cut(s)	2058, 2678
BseMII	CTCAG	8 cut(s)	298, 436, 631, 703, 752, 2304, 2538, 2552
BseNI	ACTGG	9 cut(s)	318, 403, 597, 787, 994, 1138, 1899, 2218, 2458
BseRI	GAGGAG	5 cut(s)	119, 218, 674, 677, 2700
BseSI	GKGCMC	1 cut(s)	2029
BseXI	GCAGC	5 cut(s)	108, 212, 1179, 1629, 2629
BseYI	CCCAGC	1 cut(s)	2464
BshFI	GGCC	4 cut(s)	276, 1494, 2848, 2908
BsiHKAI	GWGCWC	1 cut(s)	1526
BsiHKCI	CYCGRG	1 cut(s)	2492
BsiSI	CCGG	1 cut(s)	2256
BslFI	GGGAC	4 cut(s)	248, 449, 2098, 2430
BslI	CCNNNNNNNGG	7 cut(s)	103, 206, 1005, 1603, 1762, 2124, 2564
BsmAI	GTCTC	6 cut(s)	302, 626, 743, 2584, 2597, 2920
BsmFI	GGGAC	4 cut(s)	248, 449, 2098, 2430
BsmI	GAATGC	2 cut(s)	82, 1860
BsnI	GGCC	4 cut(s)	276, 1494, 2848, 2908
Bso31I	GGTCTC	1 cut(s)	2584
BsoBI	CYCGRG	1 cut(s)	2492
Bsp119I	TTCGAA	1 cut(s)	1084
Bsp1286I	GDGCHC	2 cut(s)	1526, 2029
Bsp19I	CCATGG	1 cut(s)	654
BspACI	CCGC	1 cut(s)	2825
BspANI	GGCC	4 cut(s)	276, 1494, 2848, 2908
BspCNI	CTCAG	8 cut(s)	297, 435, 630, 702, 753, 2303, 2537, 2551
BspLI	GGNNCC	2 cut(s)	997, 2657
BspMAI	CTGCAG	1 cut(s)	126
BspPI	GGATC	3 cut(s)	759, 1986, 2669
BspT104I	TTCGAA	1 cut(s)	1084
BspTI	CTTAAG	2 cut(s)	1057, 1295
BspTNI	GGTCTC	1 cut(s)	2584
BsrDI	GCAATG	2 cut(s)	2058, 2678
BsrI	ACTGG	9 cut(s)	318, 403, 597, 787, 994, 1138, 1899, 2218, 2458
BssECI	CCNNGG	9 cut(s)	654, 1396, 1601, 1793, 2330, 2472, 2473, 2499, 2659
BssT1I	CCWWGG	4 cut(s)	654, 1396, 1601, 2499
Bst2UI	CCWGG	2 cut(s)	2474, 2661
Bst4CI	ACNGT	3 cut(s)	239, 1285, 2591
Bst6I	CTCTTC	3 cut(s)	1081, 1086, 1106
BstAFI	CTTAAG	2 cut(s)	1057, 1295
BstAPI	GCANNNNNTGC	1 cut(s)	1585
BstBI	TTCGAA	1 cut(s)	1084
BstC8I	GCNNGC	2 cut(s)	1590, 1787
BstDSI	CCRYGG	2 cut(s)	654, 2330
BstEII	GGTNACC	1 cut(s)	1157
BstF5I	GGATG	9 cut(s)	467, 802, 1068, 1905, 2168, 2237, 2445, 2468, 2833
BstHHI	GCGC	1 cut(s)	22
BstMAI	GTCTC	6 cut(s)	302, 626, 743, 2584, 2597, 2920
BstMWI	GCNNNNNNNGC	4 cut(s)	1585, 1887, 2548, 2914
BstNI	CCWGG	2 cut(s)	2474, 2661
BstPI	GGTNACC	1 cut(s)	1157
BstSCI	CCNGG	3 cut(s)	2254, 2472, 2659
BstSFI	CTRYAG	4 cut(s)	122, 720, 737, 2878
BstSLI	GKGCMC	1 cut(s)	2029
BstV1I	GCAGC	5 cut(s)	108, 212, 1179, 1629, 2629
BstV2I	GAAGAC	3 cut(s)	263, 855, 2349
BstX2I	RGATCY	7 cut(s)	110, 764, 1183, 1240, 1834, 1978, 2674
BstXI	CCANNNNNNTGG	1 cut(s)	2230
BstYI	RGATCY	7 cut(s)	110, 764, 1183, 1240, 1834, 1978, 2674
BsuRI	GGCC	4 cut(s)	276, 1494, 2848, 2908
BtgI	CCRYGG	2 cut(s)	654, 2330
BtsCI	GGATG	9 cut(s)	467, 802, 1068, 1905, 2168, 2237, 2445, 2468, 2833
BtsI	GCAGTG	1 cut(s)	1583
BtsIMutI	CAGTG	6 cut(s)	780, 1281, 1583, 1819, 2005, 2451
Cac8I	GCNNGC	2 cut(s)	1590, 1787
CaiI	CAGNNNCTG	1 cut(s)	2753
CfoI	GCGC	1 cut(s)	22
Cfr13I	GGNCC	5 cut(s)	923, 1136, 1468, 1492, 2503
CseI	GACGC	1 cut(s)	1028
Csp6I	GTAC	2 cut(s)	1876, 2262
CspCI	CAANNNNNGTGG	6 cut(s)	901, 936, 1042, 1077, 1762, 1797
CviQI	GTAC	2 cut(s)	1876, 2262
Eam1104I	CTCTTC	3 cut(s)	1081, 1086, 1106
EarI	CTCTTC	3 cut(s)	1081, 1086, 1106
Eco130I	CCWWGG	4 cut(s)	654, 1396, 1601, 2499
Eco147I	AGGCCT	2 cut(s)	2848, 2908
Eco31I	GGTCTC	1 cut(s)	2584
Eco32I	GATATC	1 cut(s)	1445
Eco47I	GGWCC	4 cut(s)	923, 1136, 1468, 2503
Eco57I	CTGAAG	4 cut(s)	332, 561, 1733, 1795
Eco88I	CYCGRG	1 cut(s)	2492
Eco91I	GGTNACC	1 cut(s)	1157
EcoO65I	GGTNACC	1 cut(s)	1157
EcoRI	GAATTC	2 cut(s)	713, 2191
EcoRII	CCWGG	2 cut(s)	2472, 2659
EcoRV	GATATC	1 cut(s)	1445
EcoT14I	CCWWGG	4 cut(s)	654, 1396, 1601, 2499
ErhI	CCWWGG	4 cut(s)	654, 1396, 1601, 2499
FalI	AAGNNNNNCTT	2 cut(s)	122, 154
FaqI	GGGAC	4 cut(s)	248, 449, 2098, 2430
FbaI	TGATCA	1 cut(s)	2835
FblI	GTMKAC	1 cut(s)	2899
Fnu4HI	GCNGC	5 cut(s)	122, 226, 1168, 1643, 2618
FokI	GGATG	9 cut(s)	454, 789, 1055, 1912, 2155, 2224, 2432, 2455, 2840
Fsp4HI	GCNGC	5 cut(s)	122, 226, 1168, 1643, 2618
FspBI	CTAG	7 cut(s)	32, 581, 602, 843, 1172, 1476, 2910
GlaI	GCGC	1 cut(s)	21
GluI	GCNGC	5 cut(s)	122, 226, 1168, 1643, 2618
GsaI	CCCAGC	1 cut(s)	2468
GsuI	CTGGAG	4 cut(s)	301, 1556, 1731, 2775
HaeIII	GGCC	4 cut(s)	276, 1494, 2848, 2908
HapII	CCGG	1 cut(s)	2256
HgaI	GACGC	1 cut(s)	1028
HhaI	GCGC	1 cut(s)	22
Hin6I	GCGC	1 cut(s)	20
HinP1I	GCGC	1 cut(s)	20
HincII	GTYRAC	4 cut(s)	628, 1333, 2317, 2900
HindII	GTYRAC	4 cut(s)	628, 1333, 2317, 2900
HindIII	AAGCTT	3 cut(s)	608, 875, 1827
HpaI	GTTAAC	1 cut(s)	1333
HpaII	CCGG	1 cut(s)	2256
HphI	GGTGA	6 cut(s)	66, 470, 1303, 1658, 1713, 2171
Hpy166II	GTNNAC	8 cut(s)	628, 1333, 1652, 2154, 2223, 2264, 2317, 2900
Hpy8I	GTNNAC	8 cut(s)	628, 1333, 1652, 2154, 2223, 2264, 2317, 2900
Hpy99I	CGWCG	1 cut(s)	2904
HpyAV	CCTTC	5 cut(s)	536, 2375, 2733, 2888, 2898
HpyCH4III	ACNGT	3 cut(s)	239, 1285, 2591
HpyCH4IV	ACGT	4 cut(s)	154, 1874, 1943, 2935
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1585, 1887, 2548, 2914
HpySE526I	ACGT	4 cut(s)	154, 1874, 1943, 2935
HspAI	GCGC	1 cut(s)	20
Ksp22I	TGATCA	1 cut(s)	2835
KspAI	GTTAAC	1 cut(s)	1333
LmnI	GCTCC	1 cut(s)	2713
Lsp1109I	GCAGC	5 cut(s)	108, 212, 1179, 1629, 2629
LweI	GCATC	4 cut(s)	408, 1270, 1953, 2477
MaeI	CTAG	7 cut(s)	32, 581, 602, 843, 1172, 1476, 2910
MaeII	ACGT	4 cut(s)	154, 1874, 1943, 2935
MaeIII	GTNAC	6 cut(s)	698, 1064, 1157, 1309, 1348, 2369
MfeI	CAATTG	2 cut(s)	867, 927
MflI	RGATCY	7 cut(s)	110, 764, 1183, 1240, 1834, 1978, 2674
MhlI	GDGCHC	2 cut(s)	1526, 2029
MlyI	GAGTC	4 cut(s)	572, 745, 1214, 2504
MmeI	TCCRAC	3 cut(s)	792, 876, 1345
MroXI	GAANNNNTTC	1 cut(s)	609
MslI	CAYNNNNRTG	1 cut(s)	2228
MspA1I	CMGCKG	1 cut(s)	1592
MspCI	CTTAAG	2 cut(s)	1057, 1295
MspI	CCGG	1 cut(s)	2256
MspR9I	CCNGG	3 cut(s)	2256, 2474, 2661
MunI	CAATTG	2 cut(s)	867, 927
Mva1269I	GAATGC	2 cut(s)	82, 1860
MvaI	CCWGG	2 cut(s)	2474, 2661
MwoI	GCNNNNNNNGC	4 cut(s)	1585, 1887, 2548, 2914
NciI	CCSGG	1 cut(s)	2256
NcoI	CCATGG	1 cut(s)	654
NlaIV	GGNNCC	2 cut(s)	997, 2657
NmuCI	GTSAC	3 cut(s)	698, 1309, 1348
NspV	TTCGAA	1 cut(s)	1084
PaeR7I	CTCGAG	1 cut(s)	2492
PasI	CCCWGGG	1 cut(s)	2473
PceI	AGGCCT	2 cut(s)	2848, 2908
PctI	GAATGC	2 cut(s)	82, 1860
PdmI	GAANNNNTTC	1 cut(s)	609
PflFI	GACNNNGTC	1 cut(s)	239
PkrI	GCNGC	5 cut(s)	123, 227, 1169, 1644, 2619
PleI	GAGTC	4 cut(s)	571, 745, 1214, 2503
PpsI	GAGTC	4 cut(s)	571, 745, 1214, 2503
PshBI	ATTAAT	2 cut(s)	1905, 2888
Psp1406I	AACGTT	1 cut(s)	2935
Psp6I	CCWGG	2 cut(s)	2472, 2659
PspEI	GGTNACC	1 cut(s)	1157
PspFI	CCCAGC	1 cut(s)	2464
PspGI	CCWGG	2 cut(s)	2472, 2659
PspN4I	GGNNCC	2 cut(s)	997, 2657
PspPI	GGNCC	5 cut(s)	923, 1136, 1468, 1492, 2503
PspXI	VCTCGAGB	1 cut(s)	2492
PstI	CTGCAG	1 cut(s)	126
PstNI	CAGNNNCTG	1 cut(s)	2753
PsuI	RGATCY	7 cut(s)	110, 764, 1183, 1240, 1834, 1978, 2674
PsyI	GACNNNGTC	1 cut(s)	239
PvuII	CAGCTG	1 cut(s)	1592
RsaI	GTAC	2 cut(s)	1877, 2263
RsaNI	GTAC	2 cut(s)	1876, 2262
RseI	CAYNNNNRTG	1 cut(s)	2228
SalI	GTCGAC	1 cut(s)	2898
SatI	GCNGC	5 cut(s)	122, 226, 1168, 1643, 2618
Sau96I	GGNCC	5 cut(s)	923, 1136, 1468, 1492, 2503
SchI	GAGTC	4 cut(s)	572, 745, 1214, 2504
ScrFI	CCNGG	3 cut(s)	2256, 2474, 2661
SduI	GDGCHC	2 cut(s)	1526, 2029
SfaNI	GCATC	4 cut(s)	408, 1270, 1953, 2477
SfcI	CTRYAG	4 cut(s)	122, 720, 737, 2878
Sfr274I	CTCGAG	1 cut(s)	2492
SfuI	TTCGAA	1 cut(s)	1084
SinI	GGWCC	4 cut(s)	923, 1136, 1468, 2503
SlaI	CTCGAG	1 cut(s)	2492
SmiMI	CAYNNNNRTG	1 cut(s)	2228
SmlI	CTYRAG	5 cut(s)	1057, 1295, 1967, 2365, 2492
SmoI	CTYRAG	5 cut(s)	1057, 1295, 1967, 2365, 2492
SpeI	ACTAGT	1 cut(s)	31
SseBI	AGGCCT	2 cut(s)	2848, 2908
SsiI	CCGC	1 cut(s)	2825
SspI	AATATT	1 cut(s)	1227
SspMI	CTAG	7 cut(s)	32, 581, 602, 843, 1172, 1476, 2910
StuI	AGGCCT	2 cut(s)	2848, 2908
StyD4I	CCNGG	3 cut(s)	2254, 2472, 2659
StyI	CCWWGG	4 cut(s)	654, 1396, 1601, 2499
TaaI	ACNGT	3 cut(s)	239, 1285, 2591
TaiI	ACGT	4 cut(s)	157, 1877, 1946, 2938
TaqI	TCGA	7 cut(s)	147, 243, 1084, 2458, 2493, 2726, 2899
TscAI	CASTG	6 cut(s)	787, 1288, 1590, 1819, 2005, 2458
TseFI	GTSAC	3 cut(s)	698, 1309, 1348
TseI	GCWGC	5 cut(s)	121, 225, 1167, 1642, 2617
Tsp45I	GTSAC	3 cut(s)	698, 1309, 1348
TspGWI	ACGGA	1 cut(s)	2347
TspRI	CASTG	6 cut(s)	787, 1288, 1590, 1819, 2005, 2458
Tth111I	GACNNNGTC	1 cut(s)	239
Vha464I	CTTAAG	2 cut(s)	1057, 1295
VpaK11BI	GGWCC	4 cut(s)	923, 1136, 1468, 2503
VspI	ATTAAT	2 cut(s)	1905, 2888
XbaI	TCTAGA	1 cut(s)	601
XcmI	CCANNNNNNNNNTGG	3 cut(s)	779, 1146, 1891
XhoI	CTCGAG	1 cut(s)	2492
XmiI	GTMKAC	1 cut(s)	2899
XmnI	GAANNNNTTC	1 cut(s)	609
XspI	CTAG	7 cut(s)	32, 581, 602, 843, 1172, 1476, 2910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.