Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001002

Physical Location & Seq

Genomic Coordinates Forward (+)

47305528 .. 47307021

Gene Structure 1494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0357000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGTGGGGGAAAGAATTGTTACTTAAAGGAATTAGGTGGAGGGTTGGAAATGGGGAATCAATCAAGGTTTTTTGTGATCCATGGGTTCCAGATTTAAATGGATTTCGAGTTACGTATAGCGATGGTGCTCCTCTTGCTCTTGTAGTGGCTGATTTGTTCAACGACGCCGGGCTCTGGAATATTCAATTATTGGATCAGTTGGTTGGAGCCCAAGAGAAGGAAGCTATCTTGAAGATTCCTTTGGCGAGGACAACTAAACCAGACTTATGCATCTGGAACTACTGCAAGAATGGGAGGTATACTGTAAAGAGTGGCCATTGGTTGGCTAGGAAGGAGGCTCGGGAAGGGCCGGTGAACAATGTTAACAATGCTCCAGGGAAGTTTTGGAAGCATCTTTGGAAGCTTAAAGTGCCTCCAAAGATGAAACATTTTCTGTGGAGATGTGCAATGGGATTTATACCGACTATGGAAGCGTTGCATTGGAAGAGAATTACTCAGACGGCGATTTGTTTCCGGTGTCACCAAGAGATAGAAACGCCTGTACACGCAACATGGAGGTGTGGAGAATGTGTTGCGGTGTTCGAAAGGGCGGCTTTCTTCTCCAAACTGTCAACCGGTCAGTTTCCTTCTTTTATTGAGTTTTTTTATTATGCCATGGAAACCTTGGAGGAAGAGGAGTTACAATTGCTTGTCTTCCTTCTGTGGTGGAATTGGTATGAAAGAAATTCCCTATATCACAATGGAACTTCGTTGTCTTCTGAGATGGTATTTGAAAAAGGGGTGCAGCAGGTGTCTGAGTGGCGTGCTACTGTCATAAGGAGGAATGTAATTGAGGAGGGGTTTGTCTTTGGTAGGTTGAATGGTTGTGATGGGTTGAGGGTGCATGGGGAGACCTTGCATGGGAGCACTGTAAATGGTTGGCAACCTCCAGAGCGAGGAAAACTGAAATTGAATTGTGATGGGGCAGCATCACCCAATGCAGGCCATTATGGGGTGGGTTTTATTGTAAGAAATGCAACTGGAGATATTGTCTTGGCTGCTGGTCAAAGAATTCTGCACCTTGTTTCTCCTTTGCTGTCAGAGTTGCTAGCCATAAAAATGGGGTTGGAGATGGTGAAGGAAAGAAGGTTAGATGTCGTGGAGGTGGAAAGTGACTGTCTTAGTGCAGTGCAGCTTATTAATCGAAGAGAGAAGTGTTTTGCTGCGGAAGGGATAATTGTGGAAGAGGTTCAGTCGGTTCTAGATGATCTTCATATCTCTAGGATCATTCATACGCCGCGAAATAATAATCAAGCTGCTGATGCAATTGCTAAGTTTGTAGCCCGAGGAAGTGGGCGGGAACTATGGTTAGAGGATGTGCCTTATTGGCTCATTTCCATCACTTCTAGTGAGAGGCCTTTAACCGAAGCTGGTAGGAGGGGTTTGAGTAGAGGATGTTCTTCCAGGTTGTTGGGAGTTACTGAGTCTATAACGGGTCAAACCCGAGTTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0010033 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LEA_5

Protein Analysis

497

Amino Acids

56.31

Weight (kDa)

8.35

Isoelectric Point (pI)

40.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	124 - 187	1.1e-10	zinc-binding in reverse transcriptase
RVT_3	PF13456	318 - 439	1.7e-19	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40170 AT3G51810 AT3G51810
fragaria_vesca	FvH4_6g11140 FvH4_6g11160 FvH4_6g11170 FvH4_6g11180 FvH4_7g24640
malus_domestica	MD00G1062000.v1.1 MD04G1121100.v1.1
prunus_persica	Prupe.2G252100_v2.0.a1 Prupe.6G280200_v2.0.a1 Prupe.6G280300_v2.0.a1
pyrus_communis	pycom12g16320
rosa_chinensis	RchiOBHm_Chr3g0462601 RchiOBHm_Chr3g0462611 RchiOBHm_Chr3g0462621
rosa_laevigata	RLG00000024845 RLG00000024846 RLG00000028989
rosa_multiflora	Rmu_co8007370.1_g000001 Rmu_co8521225.1_g000002 Rmu_sc0002882.1_g000003 Rmu_sc0002882.1_g000004 Rmu_sc0002882.1_g000006 Rmu_sc0002882.1_g000007 Rmu_sc0003624.1_g000025 Rmu_sc0003624.1_g000026 Rmu_sc0006766.1_g000011 Rmu_sc0015198.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269140 Rroxscaffold_4G00286530 Rroxscaffold_4G00310890 Rroxscaffold_4G00310930 Rroxscaffold_6G00417350 Rroxscaffold_6G00417360 Rroxscaffold_6G00417370
rosa_rugosa	Rorug01G0357000 Rorug03G0057700 Rorug03G0057800 Rorug03G0057900 Rorug03G0058000 Rorug03G0058100 Rorug03G0058200
rosa_samantha	Rh1BG328500 Rh1CG341600 Rh1DG358800 Rh3AG115900 Rh3AG116000 Rh3AG116200 Rh3AG116300 Rh3BG119400 Rh3BG119500 Rh3BG119700 Rh3BG119800 Rh3CG122700 Rh3CG122800 Rh3CG123000 Rh3DG121500 Rh3DG121600 Rh3DG121700
rosa_wichuraiana	Rw3G009820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	778
Acc36I	ACCTGC	1 cut(s)	778
AccB7I	CCANNNNNTGG	1 cut(s)	322
AccI	GTMKAC	1 cut(s)	299
AccII	CGCG	1 cut(s)	1279
AciI	CCGC	5 cut(s)	575, 590, 1205, 1277, 1336
AclWI	GGATC	3 cut(s)	71, 201, 1271
AcoI	YGGCCR	1 cut(s)	313
AcsI	RAATTY	2 cut(s)	724, 1050
AcyI	GRCGYC	1 cut(s)	165
AfaI	GTAC	1 cut(s)	543
AfiI	CCNNNNNNNGG	7 cut(s)	174, 217, 322, 900, 935, 980, 991
AgeI	ACCGGT	1 cut(s)	614
AgsI	TTSAA	6 cut(s)	160, 185, 232, 773, 859, 952
AjnI	CCWGG	2 cut(s)	373, 1442
AjuI	GAANNNNNNNTTGG	2 cut(s)	224, 256
AluBI	AGCT	5 cut(s)	224, 403, 1174, 1295, 1409
AluI	AGCT	5 cut(s)	224, 403, 1174, 1295, 1409
Alw21I	GWGCWC	2 cut(s)	130, 908
Alw26I	GTCTC	1 cut(s)	884
AlwI	GGATC	3 cut(s)	71, 201, 1271
Ama87I	CYCGRG	3 cut(s)	339, 1323, 1482
AoxI	GGCC	4 cut(s)	313, 347, 982, 1394
ApeKI	GCWGC	6 cut(s)	784, 965, 1037, 1171, 1202, 1295
ApoI	RAATTY	2 cut(s)	724, 1050
AseI	ATTAAT	1 cut(s)	1179
AsiGI	ACCGGT	1 cut(s)	614
Asp700I	GAANNNNTTC	1 cut(s)	1227
AspS9I	GGNCC	1 cut(s)	347
AsuC2I	CCSGG	1 cut(s)	169
AsuHPI	GGTGA	4 cut(s)	364, 512, 963, 1126
AsuII	TTCGAA	1 cut(s)	582
AsuNHI	GCTAGC	1 cut(s)	1087
AvaI	CYCGRG	3 cut(s)	339, 1323, 1482
BalI	TGGCCA	1 cut(s)	315
BanII	GRGCYC	2 cut(s)	174, 211
BarI	GAAGNNNNNNTAC	2 cut(s)	663, 695
BbsI	GAAGAC	2 cut(s)	685, 747
Bbv12I	GWGCWC	2 cut(s)	130, 908
BbvI	GCAGC	6 cut(s)	796, 977, 1024, 1183, 1189, 1282
BccI	CCATC	6 cut(s)	116, 757, 863, 953, 1105, 1385
BceAI	ACGGC	1 cut(s)	516
BciT130I	CCWGG	2 cut(s)	375, 1444
BcnI	CCSGG	1 cut(s)	169
BcoDI	GTCTC	1 cut(s)	884
BfaI	CTAG	5 cut(s)	327, 1088, 1241, 1260, 1386
BfuAI	ACCTGC	1 cut(s)	778
BglI	GCCNNNNNGGC	1 cut(s)	1366
BisI	GCNGC	8 cut(s)	591, 785, 966, 1038, 1172, 1203, 1277, 1296
BlsI	GCNGC	8 cut(s)	592, 786, 967, 1039, 1173, 1204, 1278, 1297
Bme1390I	CCNGG	3 cut(s)	169, 375, 1444
BmeT110I	CYCGRG	3 cut(s)	339, 1323, 1482
BmgT120I	GGNCC	1 cut(s)	347
BmiI	GGNNCC	2 cut(s)	87, 208
BmrFI	CCNGG	3 cut(s)	169, 375, 1444
BmsI	GCATC	4 cut(s)	279, 400, 977, 1291
BmtI	GCTAGC	1 cut(s)	1091
BpiI	GAAGAC	2 cut(s)	685, 747
BplI	GAGNNNNNCTC	2 cut(s)	478, 510
BpmI	CTGGAG	3 cut(s)	357, 912, 1041
Bpu14I	TTCGAA	1 cut(s)	582
BpuMI	CCSGG	1 cut(s)	169
BsaAI	YACGTR	1 cut(s)	114
BsaHI	GRCGYC	1 cut(s)	165
BsaI	GGTCTC	1 cut(s)	884
BsaJI	CCNNGG	5 cut(s)	80, 374, 654, 663, 1324
BsaWI	WCCGGW	2 cut(s)	513, 614
BsaXI	ACNNNNNCTCC	4 cut(s)	555, 585, 1014, 1044
Bsc4I	CCNNNNNNNGG	7 cut(s)	174, 217, 322, 900, 935, 980, 991
Bse118I	RCCGGY	2 cut(s)	349, 614
Bse1I	ACTGG	1 cut(s)	1024
Bse3DI	GCAATG	1 cut(s)	453
BseBI	CCWGG	2 cut(s)	375, 1444
BseDI	CCNNGG	5 cut(s)	80, 374, 654, 663, 1324
BseGI	GGATG	2 cut(s)	1360, 1439
BseLI	CCNNNNNNNGG	7 cut(s)	174, 217, 322, 900, 935, 980, 991
BseMI	GCAATG	1 cut(s)	453
BseMII	CTCAG	4 cut(s)	509, 750, 786, 1452
BseNI	ACTGG	1 cut(s)	1024
BseRI	GAGGAG	3 cut(s)	120, 689, 848
BseXI	GCAGC	6 cut(s)	796, 977, 1024, 1183, 1189, 1282
BsgI	GTGCAG	4 cut(s)	803, 1040, 1185, 1190
Bsh1236I	CGCG	1 cut(s)	1279
BshFI	GGCC	4 cut(s)	315, 349, 984, 1396
BshTI	ACCGGT	1 cut(s)	614
BsiHKAI	GWGCWC	2 cut(s)	130, 908
BsiHKCI	CYCGRG	3 cut(s)	339, 1323, 1482
BsiSI	CCGG	4 cut(s)	168, 350, 514, 615
BslI	CCNNNNNNNGG	7 cut(s)	174, 217, 322, 900, 935, 980, 991
BsmAI	GTCTC	1 cut(s)	884
BsnI	GGCC	4 cut(s)	315, 349, 984, 1396
Bso31I	GGTCTC	1 cut(s)	884
BsoBI	CYCGRG	3 cut(s)	339, 1323, 1482
Bsp119I	TTCGAA	1 cut(s)	582
Bsp1286I	GDGCHC	4 cut(s)	130, 174, 211, 908
Bsp1407I	TGTACA	1 cut(s)	541
Bsp143I	GATC	4 cut(s)	76, 193, 1246, 1263
Bsp19I	CCATGG	2 cut(s)	80, 654
BspACI	CCGC	5 cut(s)	575, 590, 1205, 1277, 1336
BspANI	GGCC	4 cut(s)	315, 349, 984, 1396
BspCNI	CTCAG	4 cut(s)	508, 751, 787, 1453
BspFNI	CGCG	1 cut(s)	1279
BspLI	GGNNCC	2 cut(s)	87, 208
BspMI	ACCTGC	1 cut(s)	778
BspOI	GCTAGC	1 cut(s)	1091
BspPI	GGATC	3 cut(s)	71, 201, 1271
BspT104I	TTCGAA	1 cut(s)	582
BspTNI	GGTCTC	1 cut(s)	884
BsrDI	GCAATG	1 cut(s)	453
BsrFI	RCCGGY	2 cut(s)	349, 614
BsrGI	TGTACA	1 cut(s)	541
BsrI	ACTGG	1 cut(s)	1024
BssAI	RCCGGY	2 cut(s)	349, 614
BssECI	CCNNGG	5 cut(s)	80, 374, 654, 663, 1324
BssMI	GATC	4 cut(s)	76, 193, 1246, 1263
BssNAI	GTATAC	1 cut(s)	300
BssNI	GRCGYC	1 cut(s)	165
BssT1I	CCWWGG	3 cut(s)	80, 654, 663
Bst1107I	GTATAC	1 cut(s)	300
Bst2UI	CCWGG	2 cut(s)	375, 1444
Bst4CI	ACNGT	5 cut(s)	304, 609, 811, 910, 1157
Bst6I	CTCTTC	4 cut(s)	479, 666, 1180, 1218
BstACI	GRCGYC	1 cut(s)	165
BstAUI	TGTACA	1 cut(s)	541
BstBAI	YACGTR	1 cut(s)	114
BstBI	TTCGAA	1 cut(s)	582
BstC8I	GCNNGC	3 cut(s)	804, 982, 1089
BstDEI	CTNAG	6 cut(s)	495, 759, 795, 1160, 1311, 1461
BstDSI	CCRYGG	2 cut(s)	80, 654
BstF5I	GGATG	2 cut(s)	1360, 1439
BstFNI	CGCG	1 cut(s)	1279
BstKTI	GATC	4 cut(s)	79, 196, 1249, 1266
BstMAI	GTCTC	1 cut(s)	884
BstMBI	GATC	4 cut(s)	76, 193, 1246, 1263
BstMWI	GCNNNNNNNGC	4 cut(s)	134, 409, 1301, 1366
BstNI	CCWGG	2 cut(s)	375, 1444
BstSCI	CCNGG	3 cut(s)	167, 373, 1442
BstSNI	TACGTA	1 cut(s)	114
BstUI	CGCG	1 cut(s)	1279
BstV1I	GCAGC	6 cut(s)	796, 977, 1024, 1183, 1189, 1282
BstV2I	GAAGAC	2 cut(s)	685, 747
BstXI	CCANNNNNNTGG	2 cut(s)	1099, 1450
BstZ17I	GTATAC	1 cut(s)	300
BsuRI	GGCC	4 cut(s)	315, 349, 984, 1396
BtgI	CCRYGG	2 cut(s)	80, 654
BtgZI	GCGATG	1 cut(s)	135
BtsCI	GGATG	2 cut(s)	1360, 1439
BtsI	GCAGTG	1 cut(s)	1173
BtsIMutI	CAGTG	2 cut(s)	906, 1173
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	3 cut(s)	804, 982, 1089
Cfr10I	RCCGGY	2 cut(s)	349, 614
Cfr13I	GGNCC	1 cut(s)	347
CseI	GACGC	1 cut(s)	173
Csp6I	GTAC	1 cut(s)	542
CspAI	ACCGGT	1 cut(s)	614
CviAII	CATG	5 cut(s)	81, 552, 655, 884, 899
CviQI	GTAC	1 cut(s)	542
DdeI	CTNAG	6 cut(s)	495, 759, 795, 1160, 1311, 1461
DpnI	GATC	4 cut(s)	78, 195, 1248, 1265
DpnII	GATC	4 cut(s)	76, 193, 1246, 1263
DraI	TTTAAA	1 cut(s)	96
EaeI	YGGCCR	1 cut(s)	313
Eam1104I	CTCTTC	4 cut(s)	479, 666, 1180, 1218
EarI	CTCTTC	4 cut(s)	479, 666, 1180, 1218
Eco105I	TACGTA	1 cut(s)	114
Eco130I	CCWWGG	3 cut(s)	80, 654, 663
Eco147I	AGGCCT	1 cut(s)	1396
Eco24I	GRGCYC	2 cut(s)	174, 211
Eco31I	GGTCTC	1 cut(s)	884
Eco88I	CYCGRG	3 cut(s)	339, 1323, 1482
EcoRI	GAATTC	1 cut(s)	1050
EcoRII	CCWGG	2 cut(s)	373, 1442
EcoT14I	CCWWGG	3 cut(s)	80, 654, 663
EcoT22I	ATGCAT	1 cut(s)	272
EcoT38I	GRGCYC	2 cut(s)	174, 211
ErhI	CCWWGG	3 cut(s)	80, 654, 663
FaeI	CATG	5 cut(s)	84, 555, 658, 887, 902
FalI	AAGNNNNNCTT	2 cut(s)	577, 609
FatI	CATG	5 cut(s)	80, 551, 654, 883, 898
FauI	CCCGC	1 cut(s)	1329
FblI	GTMKAC	1 cut(s)	299
Fnu4HI	GCNGC	8 cut(s)	591, 785, 966, 1038, 1172, 1203, 1277, 1296
FokI	GGATG	2 cut(s)	1367, 1446
FriOI	GRGCYC	2 cut(s)	174, 211
Fsp4HI	GCNGC	8 cut(s)	591, 785, 966, 1038, 1172, 1203, 1277, 1296
FspBI	CTAG	5 cut(s)	327, 1088, 1241, 1260, 1386
GluI	GCNGC	8 cut(s)	591, 785, 966, 1038, 1172, 1203, 1277, 1296
GsuI	CTGGAG	3 cut(s)	357, 912, 1041
HaeIII	GGCC	4 cut(s)	315, 349, 984, 1396
HapII	CCGG	4 cut(s)	168, 350, 514, 615
HgaI	GACGC	1 cut(s)	173
Hin1I	GRCGYC	1 cut(s)	165
Hin1II	CATG	5 cut(s)	84, 555, 658, 887, 902
HincII	GTYRAC	2 cut(s)	364, 612
HindII	GTYRAC	2 cut(s)	364, 612
HindIII	AAGCTT	1 cut(s)	401
HinfI	GANTC	3 cut(s)	56, 235, 1463
HpaI	GTTAAC	1 cut(s)	364
HpaII	CCGG	4 cut(s)	168, 350, 514, 615
HphI	GGTGA	4 cut(s)	364, 512, 963, 1126
Hpy166II	GTNNAC	5 cut(s)	300, 355, 364, 544, 612
Hpy188I	TCNGA	4 cut(s)	498, 760, 796, 1081
Hpy188III	TCNNGA	7 cut(s)	89, 175, 229, 274, 341, 929, 1241
Hpy8I	GTNNAC	5 cut(s)	300, 355, 364, 544, 612
Hpy99I	CGWCG	1 cut(s)	167
HpyAV	CCTTC	8 cut(s)	211, 325, 338, 636, 707, 1111, 1119, 1202
HpyCH4III	ACNGT	5 cut(s)	304, 609, 811, 910, 1157
HpyCH4IV	ACGT	1 cut(s)	113
HpyF10VI	GCNNNNNNNGC	4 cut(s)	134, 409, 1301, 1366
HpyF3I	CTNAG	6 cut(s)	495, 759, 795, 1160, 1311, 1461
HpySE526I	ACGT	1 cut(s)	113
Hsp92I	GRCGYC	1 cut(s)	165
Hsp92II	CATG	5 cut(s)	84, 555, 658, 887, 902
KspAI	GTTAAC	1 cut(s)	364
Kzo9I	GATC	4 cut(s)	76, 193, 1246, 1263
LmnI	GCTCC	4 cut(s)	133, 206, 376, 903
Lsp1109I	GCAGC	6 cut(s)	796, 977, 1024, 1183, 1189, 1282
LweI	GCATC	4 cut(s)	279, 400, 977, 1291
MaeI	CTAG	5 cut(s)	327, 1088, 1241, 1260, 1386
MaeII	ACGT	1 cut(s)	113
MaeIII	GTNAC	6 cut(s)	18, 109, 518, 678, 1151, 1456
MalI	GATC	4 cut(s)	78, 195, 1248, 1265
MboI	GATC	4 cut(s)	76, 193, 1246, 1263
MfeI	CAATTG	2 cut(s)	683, 1305
MhlI	GDGCHC	4 cut(s)	130, 174, 211, 908
MlsI	TGGCCA	1 cut(s)	315
MluNI	TGGCCA	1 cut(s)	315
MlyI	GAGTC	1 cut(s)	1472
MmeI	TCCRAC	3 cut(s)	25, 184, 1086
Mox20I	TGGCCA	1 cut(s)	315
Mph1103I	ATGCAT	1 cut(s)	272
MroXI	GAANNNNTTC	1 cut(s)	1227
MscI	TGGCCA	1 cut(s)	315
MseI	TTAA	6 cut(s)	24, 95, 363, 405, 1179, 1400
MslI	CAYNNNNRTG	2 cut(s)	556, 1097
Msp20I	TGGCCA	1 cut(s)	315
MspI	CCGG	4 cut(s)	168, 350, 514, 615
MspR9I	CCNGG	3 cut(s)	169, 375, 1444
MunI	CAATTG	2 cut(s)	683, 1305
MvaI	CCWGG	2 cut(s)	375, 1444
MvnI	CGCG	1 cut(s)	1279
MwoI	GCNNNNNNNGC	4 cut(s)	134, 409, 1301, 1366
NciI	CCSGG	1 cut(s)	169
NcoI	CCATGG	2 cut(s)	80, 654
NdeII	GATC	4 cut(s)	76, 193, 1246, 1263
NheI	GCTAGC	1 cut(s)	1087
NlaIII	CATG	5 cut(s)	84, 555, 658, 887, 902
NlaIV	GGNNCC	2 cut(s)	87, 208
NmuCI	GTSAC	2 cut(s)	518, 1151
NsiI	ATGCAT	1 cut(s)	272
NspV	TTCGAA	1 cut(s)	582
PaqCI	CACCTGC	1 cut(s)	778
PceI	AGGCCT	1 cut(s)	1396
PdmI	GAANNNNTTC	1 cut(s)	1227
PfeI	GAWTC	2 cut(s)	56, 235
PflMI	CCANNNNNTGG	1 cut(s)	322
PinAI	ACCGGT	1 cut(s)	614
PkrI	GCNGC	8 cut(s)	592, 786, 967, 1039, 1173, 1204, 1278, 1297
PleI	GAGTC	1 cut(s)	1471
PpsI	GAGTC	1 cut(s)	1471
Ppu21I	YACGTR	1 cut(s)	114
PshBI	ATTAAT	1 cut(s)	1179
Psp6I	CCWGG	2 cut(s)	373, 1442
PspGI	CCWGG	2 cut(s)	373, 1442
PspN4I	GGNNCC	2 cut(s)	87, 208
PspPI	GGNCC	1 cut(s)	347
PsrI	GAACNNNNNNTAC	2 cut(s)	1420, 1452
RsaI	GTAC	1 cut(s)	543
RsaNI	GTAC	1 cut(s)	542
RseI	CAYNNNNRTG	2 cut(s)	556, 1097
SaqAI	TTAA	6 cut(s)	24, 95, 363, 405, 1179, 1400
SatI	GCNGC	8 cut(s)	591, 785, 966, 1038, 1172, 1203, 1277, 1296
Sau3AI	GATC	4 cut(s)	76, 193, 1246, 1263
Sau96I	GGNCC	1 cut(s)	347
SchI	GAGTC	1 cut(s)	1472
ScrFI	CCNGG	3 cut(s)	169, 375, 1444
SduI	GDGCHC	4 cut(s)	130, 174, 211, 908
SfaNI	GCATC	4 cut(s)	279, 400, 977, 1291
SfuI	TTCGAA	1 cut(s)	582
SmiI	ATTTAAAT	1 cut(s)	96
SmiMI	CAYNNNNRTG	2 cut(s)	556, 1097
SnaBI	TACGTA	1 cut(s)	114
SseBI	AGGCCT	1 cut(s)	1396
SsiI	CCGC	5 cut(s)	575, 590, 1205, 1277, 1336
SspI	AATATT	1 cut(s)	181
SspMI	CTAG	5 cut(s)	327, 1088, 1241, 1260, 1386
StuI	AGGCCT	1 cut(s)	1396
StyD4I	CCNGG	3 cut(s)	167, 373, 1442
StyI	CCWWGG	3 cut(s)	80, 654, 663
SwaI	ATTTAAAT	1 cut(s)	96
TaaI	ACNGT	5 cut(s)	304, 609, 811, 910, 1157
TaiI	ACGT	1 cut(s)	116
TaqI	TCGA	3 cut(s)	106, 582, 1183
TatI	WGTACW	1 cut(s)	541
TauI	GCSGC	2 cut(s)	593, 1279
TfiI	GAWTC	2 cut(s)	56, 235
Tru1I	TTAA	6 cut(s)	24, 95, 363, 405, 1179, 1400
Tru9I	TTAA	6 cut(s)	24, 95, 363, 405, 1179, 1400
TscAI	CASTG	2 cut(s)	913, 1173
TseFI	GTSAC	2 cut(s)	518, 1151
TseI	GCWGC	6 cut(s)	784, 965, 1037, 1171, 1202, 1295
Tsp45I	GTSAC	2 cut(s)	518, 1151
TspDTI	ATGAA	4 cut(s)	437, 732, 1241, 1259
TspRI	CASTG	2 cut(s)	913, 1173
Van91I	CCANNNNNTGG	1 cut(s)	322
VspI	ATTAAT	1 cut(s)	1179
XapI	RAATTY	2 cut(s)	724, 1050
XbaI	TCTAGA	1 cut(s)	1240
XcmI	CCANNNNNNNNNTGG	2 cut(s)	381, 661
XmiI	GTMKAC	1 cut(s)	299
XmnI	GAANNNNTTC	1 cut(s)	1227
XspI	CTAG	5 cut(s)	327, 1088, 1241, 1260, 1386
Zsp2I	ATGCAT	1 cut(s)	272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.