Ankyrin repeats (many copies)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04710 AT3G04710 AT3G04710 |
| fragaria_vesca | FvH4_6g02680 FvH4_6g02680 FvH4_6g02680 |
| malus_domestica | MD04G1226000.v1.1 MD12G1243100.v1.1 |
| prunus_persica | Prupe.6G344800_v2.0.a1 Prupe.6G344800_v2.0.a1 Prupe.6G344800_v2.0.a1 |
| pyrus_communis | pycom04g19920 |
| rosa_chinensis | RchiOBHm_Chr3g0450651 |
| rosa_laevigata | RLG00000009012 RLG00000015782 RLG00000021632 RLG00000025714 RLG00000028104 RLG00000030476 RLG00000032885 RLG00000033656 RLG00000035453 |
| rosa_multiflora | Rmu_sc0000078.1_g000037 Rmu_sc0000078.1_g000039 Rmu_sc0000363.1_g000053 Rmu_sc0004087.1_g000001 Rmu_sc0004482.1_g000035 Rmu_ssc0000041.1_g000028 |
| rosa_roxburghii | Rroxscaffold_6G00428310 |
| rosa_rugosa | Rorug02G0629300 |
| rosa_samantha | Rh3AG030000 Rh3BG030400 Rh3CG029300 Rh3DG030100 Rh3DG068700 Rh4BG215400 Rh4CG266900 Rh5AG295200 Rh6AG203900 Rh7DG321200 |
| rosa_wichuraiana | Rw3G002310 Rw5G037800 Rw6G017710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 99 |
| AclWI | GGATC | 1 cut(s) | 118 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 91 |
| AgsI | TTSAA | 2 cut(s) | 319, 373 |
| AjnI | CCWGG | 1 cut(s) | 84 |
| AluBI | AGCT | 3 cut(s) | 81, 198, 284 |
| AluI | AGCT | 3 cut(s) | 81, 198, 284 |
| Alw26I | GTCTC | 1 cut(s) | 259 |
| AlwI | GGATC | 1 cut(s) | 118 |
| Ama87I | CYCGRG | 1 cut(s) | 193 |
| AoxI | GGCC | 1 cut(s) | 404 |
| ApeKI | GCWGC | 3 cut(s) | 383, 392, 395 |
| AspS9I | GGNCC | 1 cut(s) | 404 |
| AsuC2I | CCSGG | 2 cut(s) | 402, 418 |
| AsuHPI | GGTGA | 1 cut(s) | 236 |
| AvaI | CYCGRG | 1 cut(s) | 193 |
| BbvI | GCAGC | 3 cut(s) | 370, 379, 382 |
| BccI | CCATC | 1 cut(s) | 128 |
| BciT130I | CCWGG | 1 cut(s) | 86 |
| BcnI | CCSGG | 2 cut(s) | 402, 418 |
| BcoDI | GTCTC | 1 cut(s) | 259 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 422 |
| BisI | GCNGC | 3 cut(s) | 384, 393, 396 |
| BlsI | GCNGC | 3 cut(s) | 385, 394, 397 |
| Bme1390I | CCNGG | 3 cut(s) | 86, 402, 418 |
| BmeT110I | CYCGRG | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 404 |
| BmiI | GGNNCC | 1 cut(s) | 405 |
| BmrFI | CCNGG | 3 cut(s) | 86, 402, 418 |
| BmsI | GCATC | 1 cut(s) | 121 |
| Bpu10I | CCTNAGC | 1 cut(s) | 387 |
| BpuMI | CCSGG | 2 cut(s) | 402, 418 |
| BsaJI | CCNNGG | 2 cut(s) | 401, 417 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 91 |
| Bse1I | ACTGG | 1 cut(s) | 278 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| BseBI | CCWGG | 1 cut(s) | 86 |
| BseDI | CCNNGG | 2 cut(s) | 401, 417 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BseMII | CTCAG | 1 cut(s) | 401 |
| BseNI | ACTGG | 1 cut(s) | 278 |
| BseXI | GCAGC | 3 cut(s) | 370, 379, 382 |
| BshFI | GGCC | 1 cut(s) | 406 |
| BsiHKCI | CYCGRG | 1 cut(s) | 193 |
| BsiSI | CCGG | 2 cut(s) | 401, 417 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BsmAI | GTCTC | 1 cut(s) | 259 |
| BsnI | GGCC | 1 cut(s) | 406 |
| BsoBI | CYCGRG | 1 cut(s) | 193 |
| Bsp143I | GATC | 1 cut(s) | 110 |
| BspACI | CCGC | 1 cut(s) | 99 |
| BspANI | GGCC | 1 cut(s) | 406 |
| BspCNI | CTCAG | 1 cut(s) | 400 |
| BspHI | TCATGA | 1 cut(s) | 361 |
| BspLI | GGNNCC | 1 cut(s) | 405 |
| BspPI | GGATC | 1 cut(s) | 118 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| BsrI | ACTGG | 1 cut(s) | 278 |
| BssECI | CCNNGG | 2 cut(s) | 401, 417 |
| BssMI | GATC | 1 cut(s) | 110 |
| Bst2UI | CCWGG | 1 cut(s) | 86 |
| Bst4CI | ACNGT | 1 cut(s) | 248 |
| BstDEI | CTNAG | 1 cut(s) | 387 |
| BstKTI | GATC | 1 cut(s) | 113 |
| BstMAI | GTCTC | 1 cut(s) | 259 |
| BstMBI | GATC | 1 cut(s) | 110 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 389, 392, 422 |
| BstNI | CCWGG | 1 cut(s) | 86 |
| BstSCI | CCNGG | 3 cut(s) | 84, 400, 416 |
| BstV1I | GCAGC | 3 cut(s) | 370, 379, 382 |
| BstX2I | RGATCY | 1 cut(s) | 110 |
| BstYI | RGATCY | 1 cut(s) | 110 |
| BsuRI | GGCC | 1 cut(s) | 406 |
| BtsI | GCAGTG | 2 cut(s) | 146, 464 |
| BtsIMutI | CAGTG | 2 cut(s) | 146, 464 |
| CciI | TCATGA | 1 cut(s) | 361 |
| Cfr13I | GGNCC | 1 cut(s) | 404 |
| CviAII | CATG | 2 cut(s) | 183, 362 |
| DdeI | CTNAG | 1 cut(s) | 387 |
| DpnI | GATC | 1 cut(s) | 112 |
| DpnII | GATC | 1 cut(s) | 110 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| Eco88I | CYCGRG | 1 cut(s) | 193 |
| EcoRII | CCWGG | 1 cut(s) | 84 |
| FaeI | CATG | 2 cut(s) | 186, 365 |
| FaiI | YATR | 6 cut(s) | 17, 23, 52, 54, 184, 363 |
| FatI | CATG | 2 cut(s) | 182, 361 |
| FauNDI | CATATG | 1 cut(s) | 52 |
| Fnu4HI | GCNGC | 3 cut(s) | 384, 393, 396 |
| Fsp4HI | GCNGC | 3 cut(s) | 384, 393, 396 |
| GluI | GCNGC | 3 cut(s) | 384, 393, 396 |
| HaeIII | GGCC | 1 cut(s) | 406 |
| HapII | CCGG | 2 cut(s) | 401, 417 |
| Hin1II | CATG | 2 cut(s) | 186, 365 |
| HinfI | GANTC | 2 cut(s) | 189, 431 |
| HpaII | CCGG | 2 cut(s) | 401, 417 |
| HphI | GGTGA | 1 cut(s) | 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 2 cut(s) | 264, 430 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 193, 362 |
| Hpy8I | GTNNAC | 1 cut(s) | 203 |
| HpyAV | CCTTC | 4 cut(s) | 53, 59, 349, 367 |
| HpyCH4III | ACNGT | 1 cut(s) | 248 |
| HpyCH4IV | ACGT | 1 cut(s) | 293 |
| HpyCH4V | TGCA | 3 cut(s) | 15, 134, 457 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 389, 392, 422 |
| HpyF3I | CTNAG | 1 cut(s) | 387 |
| HpySE526I | ACGT | 1 cut(s) | 293 |
| Hsp92II | CATG | 2 cut(s) | 186, 365 |
| Kzo9I | GATC | 1 cut(s) | 110 |
| LmnI | GCTCC | 1 cut(s) | 403 |
| LpnPI | CCDG | 9 cut(s) | 71, 98, 259, 345, 364, 374, 414, 420, 430 |
| Lsp1109I | GCAGC | 3 cut(s) | 370, 379, 382 |
| LweI | GCATC | 1 cut(s) | 121 |
| MaeII | ACGT | 1 cut(s) | 293 |
| MalI | GATC | 1 cut(s) | 112 |
| MboI | GATC | 1 cut(s) | 110 |
| MboII | GAAGA | 2 cut(s) | 297, 300 |
| MflI | RGATCY | 1 cut(s) | 110 |
| MmeI | TCCRAC | 1 cut(s) | 88 |
| MnlI | CCTC | 7 cut(s) | 85, 189, 232, 322, 346, 358, 415 |
| MspI | CCGG | 2 cut(s) | 401, 417 |
| MspR9I | CCNGG | 3 cut(s) | 86, 402, 418 |
| MvaI | CCWGG | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 389, 392, 422 |
| NciI | CCSGG | 2 cut(s) | 402, 418 |
| NdeI | CATATG | 1 cut(s) | 52 |
| NdeII | GATC | 1 cut(s) | 110 |
| NlaIII | CATG | 2 cut(s) | 186, 365 |
| NlaIV | GGNNCC | 1 cut(s) | 405 |
| PagI | TCATGA | 1 cut(s) | 361 |
| PfeI | GAWTC | 2 cut(s) | 189, 431 |
| PkrI | GCNGC | 3 cut(s) | 385, 394, 397 |
| Psp6I | CCWGG | 1 cut(s) | 84 |
| PspGI | CCWGG | 1 cut(s) | 84 |
| PspN4I | GGNNCC | 1 cut(s) | 405 |
| PspPI | GGNCC | 1 cut(s) | 404 |
| PsuI | RGATCY | 1 cut(s) | 110 |
| SatI | GCNGC | 3 cut(s) | 384, 393, 396 |
| Sau3AI | GATC | 1 cut(s) | 110 |
| Sau96I | GGNCC | 1 cut(s) | 404 |
| ScrFI | CCNGG | 3 cut(s) | 86, 402, 418 |
| SetI | ASST | 7 cut(s) | 83, 90, 181, 200, 286, 296, 378 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SsiI | CCGC | 1 cut(s) | 99 |
| StyD4I | CCNGG | 3 cut(s) | 84, 400, 416 |
| TaaI | ACNGT | 1 cut(s) | 248 |
| TaiI | ACGT | 1 cut(s) | 296 |
| TaqI | TCGA | 4 cut(s) | 61, 90, 187, 448 |
| TfiI | GAWTC | 2 cut(s) | 189, 431 |
| TscAI | CASTG | 2 cut(s) | 146, 464 |
| TseI | GCWGC | 3 cut(s) | 383, 392, 395 |
| TspDTI | ATGAA | 1 cut(s) | 69 |
| TspRI | CASTG | 2 cut(s) | 146, 464 |