Ankyrin repeats (many copies)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04710 AT3G04710 AT3G04710 |
| fragaria_vesca | FvH4_6g02680 FvH4_6g02680 FvH4_6g02680 |
| malus_domestica | MD04G1226000.v1.1 MD12G1243100.v1.1 |
| prunus_persica | Prupe.6G344800_v2.0.a1 Prupe.6G344800_v2.0.a1 Prupe.6G344800_v2.0.a1 |
| pyrus_communis | pycom04g19920 |
| rosa_chinensis | RchiOBHm_Chr3g0450651 |
| rosa_laevigata | RLG00000009012 RLG00000015782 RLG00000021632 RLG00000025714 RLG00000028104 RLG00000030476 RLG00000032885 RLG00000033656 RLG00000035453 |
| rosa_multiflora | Rmu_sc0000078.1_g000037 Rmu_sc0000078.1_g000039 Rmu_sc0000363.1_g000053 Rmu_sc0004087.1_g000001 Rmu_sc0004482.1_g000035 Rmu_ssc0000041.1_g000028 |
| rosa_roxburghii | Rroxscaffold_6G00428310 |
| rosa_rugosa | Rorug02G0629300 |
| rosa_samantha | Rh3AG030000 Rh3BG030400 Rh3CG029300 Rh3DG030100 Rh3DG068700 Rh4BG215400 Rh4CG266900 Rh5AG295200 Rh6AG203900 Rh7DG321200 |
| rosa_wichuraiana | Rw3G002310 Rw5G037800 Rw6G017710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 257 |
| AciI | CCGC | 1 cut(s) | 23 |
| AcoI | YGGCCR | 1 cut(s) | 51 |
| AfaI | GTAC | 1 cut(s) | 140 |
| AgsI | TTSAA | 1 cut(s) | 157 |
| AoxI | GGCC | 3 cut(s) | 51, 118, 220 |
| ApeKI | GCWGC | 2 cut(s) | 107, 209 |
| AspA2I | CCTAGG | 1 cut(s) | 217 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AvrII | CCTAGG | 1 cut(s) | 217 |
| BalI | TGGCCA | 1 cut(s) | 53 |
| BanI | GGYRCC | 1 cut(s) | 257 |
| BbvI | GCAGC | 2 cut(s) | 94, 196 |
| BccI | CCATC | 1 cut(s) | 179 |
| BfaI | CTAG | 1 cut(s) | 218 |
| BisI | GCNGC | 2 cut(s) | 108, 210 |
| BlnI | CCTAGG | 1 cut(s) | 217 |
| BlsI | GCNGC | 2 cut(s) | 109, 211 |
| BmcAI | AGTACT | 1 cut(s) | 140 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BmiI | GGNNCC | 1 cut(s) | 259 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 1 cut(s) | 269 |
| BsaJI | CCNNGG | 1 cut(s) | 217 |
| Bse1I | ACTGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 1 cut(s) | 217 |
| BseGI | GGATG | 1 cut(s) | 82 |
| BseNI | ACTGG | 1 cut(s) | 275 |
| BseXI | GCAGC | 2 cut(s) | 94, 196 |
| BshFI | GGCC | 3 cut(s) | 53, 120, 222 |
| BshNI | GGYRCC | 1 cut(s) | 257 |
| BsnI | GGCC | 3 cut(s) | 53, 120, 222 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspANI | GGCC | 3 cut(s) | 53, 120, 222 |
| BspLI | GGNNCC | 1 cut(s) | 259 |
| BspT107I | GGYRCC | 1 cut(s) | 257 |
| BsrI | ACTGG | 1 cut(s) | 275 |
| BssECI | CCNNGG | 1 cut(s) | 217 |
| BssT1I | CCWWGG | 1 cut(s) | 217 |
| Bst4CI | ACNGT | 1 cut(s) | 61 |
| BstC8I | GCNNGC | 2 cut(s) | 95, 214 |
| BstDEI | CTNAG | 2 cut(s) | 126, 270 |
| BstF5I | GGATG | 1 cut(s) | 82 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 94 |
| BstV1I | GCAGC | 2 cut(s) | 94, 196 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 61 |
| BsuRI | GGCC | 3 cut(s) | 53, 120, 222 |
| BtsCI | GGATG | 1 cut(s) | 82 |
| BtsIMutI | CAGTG | 1 cut(s) | 282 |
| Cac8I | GCNNGC | 2 cut(s) | 95, 214 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| Csp6I | GTAC | 1 cut(s) | 139 |
| CviJI | RGCY | 5 cut(s) | 53, 65, 120, 222, 274 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 65, 120, 222, 274 |
| CviQI | GTAC | 1 cut(s) | 139 |
| DdeI | CTNAG | 2 cut(s) | 126, 270 |
| EaeI | YGGCCR | 1 cut(s) | 51 |
| EciI | GGCGGA | 1 cut(s) | 38 |
| Eco130I | CCWWGG | 1 cut(s) | 217 |
| EcoT14I | CCWWGG | 1 cut(s) | 217 |
| ErhI | CCWWGG | 1 cut(s) | 217 |
| FaiI | YATR | 3 cut(s) | 203, 225, 255 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 210 |
| FokI | GGATG | 1 cut(s) | 89 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 210 |
| FspBI | CTAG | 1 cut(s) | 218 |
| GluI | GCNGC | 2 cut(s) | 108, 210 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HaeIII | GGCC | 3 cut(s) | 53, 120, 222 |
| Hpy188III | TCNNGA | 1 cut(s) | 248 |
| HpyAV | CCTTC | 2 cut(s) | 32, 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 61 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 135 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 94 |
| HpyF3I | CTNAG | 2 cut(s) | 126, 270 |
| LpnPI | CCDG | 2 cut(s) | 131, 134 |
| Lsp1109I | GCAGC | 2 cut(s) | 94, 196 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeI | CTAG | 1 cut(s) | 218 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MlsI | TGGCCA | 1 cut(s) | 53 |
| MluCI | AATT | 2 cut(s) | 152, 159 |
| MluNI | TGGCCA | 1 cut(s) | 53 |
| MnlI | CCTC | 3 cut(s) | 83, 109, 142 |
| Mox20I | TGGCCA | 1 cut(s) | 53 |
| MscI | TGGCCA | 1 cut(s) | 53 |
| MseI | TTAA | 2 cut(s) | 72, 283 |
| Msp20I | TGGCCA | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 94 |
| NlaIV | GGNNCC | 1 cut(s) | 259 |
| PkrI | GCNGC | 2 cut(s) | 109, 211 |
| PspN4I | GGNNCC | 1 cut(s) | 259 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 140 |
| RsaNI | GTAC | 1 cut(s) | 139 |
| SaqAI | TTAA | 2 cut(s) | 72, 283 |
| SatI | GCNGC | 2 cut(s) | 108, 210 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| ScaI | AGTACT | 1 cut(s) | 140 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| SmlI | CTYRAG | 1 cut(s) | 248 |
| SmoI | CTYRAG | 1 cut(s) | 248 |
| Sse9I | AATT | 2 cut(s) | 152, 159 |
| SsiI | CCGC | 1 cut(s) | 23 |
| SspMI | CTAG | 1 cut(s) | 218 |
| StyI | CCWWGG | 1 cut(s) | 217 |
| TaaI | ACNGT | 1 cut(s) | 61 |
| TasI | AATT | 2 cut(s) | 152, 159 |
| TatI | WGTACW | 1 cut(s) | 138 |
| Tru1I | TTAA | 2 cut(s) | 72, 283 |
| Tru9I | TTAA | 2 cut(s) | 72, 283 |
| TscAI | CASTG | 1 cut(s) | 282 |
| TseI | GCWGC | 2 cut(s) | 107, 209 |
| TspDTI | ATGAA | 4 cut(s) | 17, 51, 89, 195 |
| TspGWI | ACGGA | 1 cut(s) | 255 |
| TspRI | CASTG | 1 cut(s) | 282 |
| XmaJI | CCTAGG | 1 cut(s) | 217 |
| XspI | CTAG | 1 cut(s) | 218 |
| ZrmI | AGTACT | 1 cut(s) | 140 |