Rw3G002310

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0002248
Physical Location & Seq
Forward (+)
2038473 .. 2045490
7018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G002310.1

Sequence Viewer

Length: 2001 bp
ATGGATATGAACGACGTCGAGCAAATACCCGCGCCGCAGCCGGGGAAGTCATCGTTGTACTCGGAGTCATCGCCGTGCCTGTCGCTTTCGTCCTCCTCCGAGGAGCTGCAGGACATGCCGCTGGCGCCGCCGAAGATGATGAGCCGGAAGAGGCTGTGCAAGCAGCTGTCCATGTGCGAGACGCCGCGTGACATTGCATGGGAGAAGCGGCGCCGGCAAATTCTGAAGCAGGAGAGGAAGAGGAAGAGGAACGGAAATGGTGACTCCCCCGGCGCCGCCGCCGAACCAGAGGGAGACGACATGAACCTGACCGACGAGGACTTGCATGAGCTGAAAGGGTGTATAGAGCTAGGGTTTGGGTTCAACGAGGAAGAGGGTCAACGGTTGTGCCCCACATTGCCGGCTCTTGACCTTTACTTTGCCGTTAACCGCCAGTTCTCGCCGAGTCCGATCTCGTCGCCGAATAGCAGCCGACATTCCACGTCGTCAATTGGTGGTGCGACGTCGTCGTTTGGTGGACTTTCATCGTCGTTTGGAAGCCCTAGCCCTAGGAGCGACAGTGATGGATGGAAGATATGCAGCCCAGGTGATAATCCTCAACAGGTGAAGACCAAGTTGAGGCATTGGGCGCAAGCAGTTGCTTCTAGGGAAATAGTGCAGCAGTTTCTGAATGCTGCATGTACTGGGGATGTTGATCTCTTAAAGAAGTTGGCGGGGAAGCTTGATGAAGGGAAGGGATTGGCCAAAACTGTCGATGATATTAAGGATGCCAACAAGCGCGGCGCGCTTCATTTTGCTGCAAGAGAGGGCCAGTCTGAGATGTGCAAGTACTTGCTGGAGGAATTGAAACTTGATGTTGATACCAAAGACGAAGATGGCGACACTCCCCTTATTCATGCTGCTCGCCTAGGCCATACTGATACTGCAAAACTGCTTCTTGAGTATGGTGCCAATCCGTCTATAGCCAGTGATTTAGGGGCTACAGCTCTTCATCATTCCGCTGGACTAGGAAACATTGAGTTGCTGAGGTACTTAATTTCCAAGGGTGTTGATGTCAATTCACAAAGTGATGCTGGTTCTCCTTTAATTTGGGCTGCTGGTCATGACCAACCAGATGCTGTGAAAGTTCTGTTAGAACACCACGCTAATCCTAATGCTGAAAGTGATGATGATATTACTCCATTGTTGTCATCTGTGGCAGCTGGTTCACTGGCATGCTTGGAGTTATTGATTCAGGCAGGTGCCAAAGTAAATATGAGTGCTGGTGGAGCGACTCCTTTACACATTGCTGCTGATATTGGGAACTTGGAGATTATAAAATGTTTGTTAAAAGCTGGAGCTGATCCCAATGTAACTGATGAGGAGGGTTTGAAGCCAATACAGGTTGCAGCTGCAAGTGGGAACCGAAGCGCTGTGGAGATCCTCTTTCCCTTGACATCACAAGTTGAAACCATTTCAAAATGGACAGTTGATGGCATACTTGAGTATATGCAGTCTGAAACAAGCAGACTACAGGAACAACCGCGAAATACTAAGGAACTTAATGTCCCAAAAGACTCTACTTCACTGAAGAAAGAGCTCCCTGAGGTGACACCTGAGGCAAAGAAAAGAGCTGCAGAAGCAAAATTGAGAGGAGGCGATGCTTTCAGTAGAAAGGATTATCAAGCGGCTGTTGATGCATACACGCAGGCAATTGATTTGGACCCAACTGATGCCATTTTTCTTTCCAATCGAAGCCTTTGTTGGCTTCGTCTTGGCCAAGCTGAACATGCCTTAGCTGATGCAAAGGCCTGCAGGGAATTGAAACCAGACTGGCCAAAGGCTTGCTTTCGAGAAGGTGCAGCATTGCGCCTAATGCAGAAGTTTGATGAAGCAGCCAATTGTTTTTATGAGGGCGTGCAGCTCGACCCTGAAAGTAAAGAACTCGTCGATGCTTTCAGGGAAGCGGTTGAAGCTGGAAGGCAGTTCCACAGTAAAGATAAACAAAAACCAAAACCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 Ank_5 DUF1685 TPR_17 TPR_8

Protein Analysis

666

Amino Acids

72.27

Weight (kDa)

5.31

Isoelectric Point (pI)

50.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1685 PF07939 103 - 159 1.4e-24 Protein of unknown function (DUF1685)
Ank_2 PF12796 224 - 320 1.7e-16 Ankyrin repeats (3 copies)
Ank_4 PF13637 263 - 304 4.9e-06 Ankyrin repeats (many copies)
Ank PF00023 292 - 322 3.6e-07 Ankyrin repeat
Ank_4 PF13637 298 - 346 8.5e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 325 - 387 2.8e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 362 - 453 1.4e-16 Ankyrin repeats (3 copies)
Ank_2 PF12796 399 - 477 2.2e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 401 - 443 1.1e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 410 - 463 2.3e-08 Ankyrin repeats (many copies)
Ank PF00023 423 - 453 5.9e-09 Ankyrin repeat
Ank_3 PF13606 423 - 451 6e-06 Ankyrin repeat
Ank_4 PF13637 434 - 475 9.3e-06 Ankyrin repeats (many copies)
TPR_BSK1_C PF25575 535 - 610 1.2e-12 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
AarI CACCTGC 1 cut(s) 1229
AatII GACGTC 2 cut(s) 18, 506
Acc36I ACCTGC 1 cut(s) 1229
AccB1I GGYRCC 5 cut(s) 124, 210, 272, 947, 1241
AccII CGCG 5 cut(s) 32, 187, 780, 785, 1525
AclWI GGATC 2 cut(s) 1337, 1414
AcoI YGGCCR 3 cut(s) 741, 1756, 1814
AcsI RAATTY 1 cut(s) 219
AcuI CTGAAG 2 cut(s) 245, 1589
AcyI GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
AdeI CACNNNGTG 1 cut(s) 1067
AfaI GTAC 4 cut(s) 59, 682, 830, 1031
AfeI AGCGCT 1 cut(s) 1411
AfiI CCNNNNNNNGG 2 cut(s) 41, 618
AgsI TTSAA 7 cut(s) 364, 847, 1372, 1448, 1458, 1804, 1952
AjiI CACGTC 1 cut(s) 483
AjnI CCWGG 1 cut(s) 583
AjuI GAANNNNNNNTTGG 2 cut(s) 1726, 1758
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 1 cut(s) 1581
Alw26I GTCTC 2 cut(s) 173, 288
AlwI GGATC 2 cut(s) 1337, 1414
AlwNI CAGNNNCTG 2 cut(s) 667, 1118
Aor51HI AGCGCT 1 cut(s) 1411
AoxI GGCC 6 cut(s) 741, 808, 910, 1756, 1788, 1814
ApoI RAATTY 1 cut(s) 219
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
AspA2I CCTAGG 2 cut(s) 548, 907
AspS9I GGNCC 2 cut(s) 808, 1702
AsuC2I CCSGG 2 cut(s) 42, 270
AsuHPI GGTGA 4 cut(s) 272, 599, 616, 1600
AvaII GGWCC 1 cut(s) 1702
AvrII CCTAGG 2 cut(s) 548, 907
AxyI CCTNAGG 2 cut(s) 1584, 1596
BaeGI GKGCMC 1 cut(s) 392
BalI TGGCCA 3 cut(s) 743, 1758, 1816
BanI GGYRCC 5 cut(s) 124, 210, 272, 947, 1241
BanII GRGCYC 1 cut(s) 1581
BbsI GAAGAC 1 cut(s) 614
Bbv12I GWGCWC 1 cut(s) 1581
BbvCI CCTCAGC 1 cut(s) 1025
BccI CCATC 4 cut(s) 557, 561, 869, 1466
BceAI ACGGC 2 cut(s) 58, 407
BciT130I CCWGG 1 cut(s) 585
BcnI CCSGG 2 cut(s) 42, 270
BcoDI GTCTC 2 cut(s) 173, 288
BfaI CTAG 6 cut(s) 350, 543, 549, 645, 908, 1007
BfmI CTRYAG 6 cut(s) 107, 960, 981, 1511, 1614, 1792
BfoI RGCGCY 4 cut(s) 128, 214, 276, 1413
BfuAI ACCTGC 1 cut(s) 1229
BlnI CCTAGG 2 cut(s) 548, 907
BmcAI AGTACT 1 cut(s) 830
Bme1390I CCNGG 3 cut(s) 42, 270, 585
Bme18I GGWCC 1 cut(s) 1702
BmgBI CACGTC 1 cut(s) 483
BmgT120I GGNCC 2 cut(s) 808, 1702
BmiI GGNNCC 7 cut(s) 126, 212, 274, 949, 1243, 1403, 1704
BmrFI CCNGG 3 cut(s) 42, 270, 585
BmrI ACTGGG 1 cut(s) 693
BmsI GCATC 8 cut(s) 757, 1060, 1105, 1630, 1666, 1702, 1771, 1921
BmuI ACTGGG 1 cut(s) 693
BpiI GAAGAC 1 cut(s) 614
BpmI CTGGAG 2 cut(s) 857, 1356
Bpu10I CCTNAGC 2 cut(s) 1025, 1774
BpuEI CTTGAG 2 cut(s) 959, 1502
BpuMI CCSGG 2 cut(s) 42, 270
BsaBI GATNNNNATC 1 cut(s) 693
BsaHI GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
BsaJI CCNNGG 7 cut(s) 41, 99, 268, 548, 583, 907, 1041
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 618
Bse118I RCCGGY 2 cut(s) 213, 400
Bse1I ACTGG 6 cut(s) 433, 688, 811, 966, 1215, 1817
Bse21I CCTNAGG 2 cut(s) 1584, 1596
Bse3DI GCAATG 4 cut(s) 192, 395, 1284, 1844
Bse8I GATNNNNATC 1 cut(s) 693
BseBI CCWGG 1 cut(s) 585
BseDI CCNNGG 7 cut(s) 41, 99, 268, 548, 583, 907, 1041
BseGI GGATG 3 cut(s) 572, 694, 772
BseJI GATNNNNATC 1 cut(s) 693
BseLI CCNNNNNNNGG 2 cut(s) 41, 618
BseMI GCAATG 4 cut(s) 192, 395, 1284, 1844
BseMII CTCAG 4 cut(s) 807, 1016, 1575, 1587
BseNI ACTGG 6 cut(s) 433, 688, 811, 966, 1215, 1817
BsePI GCGCGC 1 cut(s) 783
BseRI GAGGAG 4 cut(s) 85, 116, 1376, 1647
BseSI GKGCMC 1 cut(s) 392
BsgI GTGCAG 3 cut(s) 677, 1860, 1919
Bsh1236I CGCG 5 cut(s) 32, 187, 780, 785, 1525
BshFI GGCC 6 cut(s) 743, 810, 912, 1758, 1790, 1816
BshNI GGYRCC 5 cut(s) 124, 210, 272, 947, 1241
BsiHKAI GWGCWC 1 cut(s) 1581
BsiSI CCGG 5 cut(s) 41, 145, 214, 270, 401
BslFI GGGAC 1 cut(s) 1532
BslI CCNNNNNNNGG 2 cut(s) 41, 618
BsmAI GTCTC 2 cut(s) 173, 288
BsmBI CGTCTC 2 cut(s) 173, 288
BsmFI GGGAC 1 cut(s) 1532
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 6 cut(s) 743, 810, 912, 1758, 1790, 1816
Bsp1286I GDGCHC 2 cut(s) 392, 1581
Bsp143I GATC 4 cut(s) 450, 694, 1342, 1419
BspANI GGCC 6 cut(s) 743, 810, 912, 1758, 1790, 1816
BspCNI CTCAG 4 cut(s) 808, 1017, 1576, 1588
BspFNI CGCG 5 cut(s) 32, 187, 780, 785, 1525
BspHI TCATGA 1 cut(s) 1102
BspLI GGNNCC 7 cut(s) 126, 212, 274, 949, 1243, 1403, 1704
BspMAI CTGCAG 3 cut(s) 111, 1618, 1796
BspMI ACCTGC 1 cut(s) 1229
BspPI GGATC 2 cut(s) 1337, 1414
BspQI GCTCTTC 1 cut(s) 993
BspT107I GGYRCC 5 cut(s) 124, 210, 272, 947, 1241
BsrDI GCAATG 4 cut(s) 192, 395, 1284, 1844
BsrFI RCCGGY 2 cut(s) 213, 400
BsrI ACTGG 6 cut(s) 433, 688, 811, 966, 1215, 1817
BssAI RCCGGY 2 cut(s) 213, 400
BssECI CCNNGG 7 cut(s) 41, 99, 268, 548, 583, 907, 1041
BssHII GCGCGC 1 cut(s) 783
BssMI GATC 4 cut(s) 450, 694, 1342, 1419
BssNI GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
BssT1I CCWWGG 3 cut(s) 548, 907, 1041
Bst2UI CCWGG 1 cut(s) 585
Bst4CI ACNGT 5 cut(s) 384, 560, 751, 1468, 1973
Bst6I CTCTTC 5 cut(s) 143, 233, 239, 366, 993
BstACI GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
BstAPI GCANNNNNTGC 1 cut(s) 115
BstDEI CTNAG 7 cut(s) 816, 1025, 1533, 1584, 1596, 1774, 1998
BstF5I GGATG 3 cut(s) 572, 694, 772
BstFNI CGCG 5 cut(s) 32, 187, 780, 785, 1525
BstH2I RGCGCY 4 cut(s) 128, 214, 276, 1413
BstKTI GATC 4 cut(s) 453, 697, 1345, 1422
BstMAI GTCTC 2 cut(s) 173, 288
BstMBI GATC 4 cut(s) 450, 694, 1342, 1419
BstNI CCWGG 1 cut(s) 585
BstNSI RCATGY 4 cut(s) 118, 681, 1218, 1772
BstSCI CCNGG 3 cut(s) 40, 268, 583
BstSFI CTRYAG 6 cut(s) 107, 960, 981, 1511, 1614, 1792
BstSLI GKGCMC 1 cut(s) 392
BstUI CGCG 5 cut(s) 32, 187, 780, 785, 1525
BstV2I GAAGAC 1 cut(s) 614
BstX2I RGATCY 1 cut(s) 1419
BstYI RGATCY 1 cut(s) 1419
Bsu36I CCTNAGG 2 cut(s) 1584, 1596
BsuRI GGCC 6 cut(s) 743, 810, 912, 1758, 1790, 1816
BtgZI GCGATG 2 cut(s) 54, 1653
BtrI CACGTC 1 cut(s) 483
BtsCI GGATG 3 cut(s) 572, 694, 772
BtsIMutI CAGTG 4 cut(s) 565, 973, 1208, 1565
BveI ACCTGC 1 cut(s) 1229
CaiI CAGNNNCTG 2 cut(s) 667, 1118
CciI TCATGA 1 cut(s) 1102
Cfr10I RCCGGY 2 cut(s) 213, 400
Cfr13I GGNCC 2 cut(s) 808, 1702
CseI GACGC 1 cut(s) 190
Csp6I GTAC 4 cut(s) 58, 681, 829, 1030
CviQI GTAC 4 cut(s) 58, 681, 829, 1030
DdeI CTNAG 7 cut(s) 816, 1025, 1533, 1584, 1596, 1774, 1998
DinI GGCGCC 3 cut(s) 126, 212, 274
DpnI GATC 4 cut(s) 452, 696, 1344, 1421
DpnII GATC 4 cut(s) 450, 694, 1342, 1419
DraIII CACNNNGTG 1 cut(s) 1067
EaeI YGGCCR 3 cut(s) 741, 1756, 1814
Eam1104I CTCTTC 5 cut(s) 143, 233, 239, 366, 993
EarI CTCTTC 5 cut(s) 143, 233, 239, 366, 993
Ecl136II GAGCTC 1 cut(s) 1579
Eco130I CCWWGG 3 cut(s) 548, 907, 1041
Eco147I AGGCCT 1 cut(s) 1790
Eco24I GRGCYC 1 cut(s) 1581
Eco47I GGWCC 1 cut(s) 1702
Eco47III AGCGCT 1 cut(s) 1411
Eco53kI GAGCTC 1 cut(s) 1579
Eco57I CTGAAG 2 cut(s) 245, 1589
Eco81I CCTNAGG 2 cut(s) 1584, 1596
EcoICRI GAGCTC 1 cut(s) 1579
EcoRII CCWGG 1 cut(s) 583
EcoT14I CCWWGG 3 cut(s) 548, 907, 1041
EcoT22I ATGCAT 1 cut(s) 1681
EcoT38I GRGCYC 1 cut(s) 1581
EgeI GGCGCC 3 cut(s) 126, 212, 274
EheI GGCGCC 3 cut(s) 126, 212, 274
ErhI CCWWGG 3 cut(s) 548, 907, 1041
Esp3I CGTCTC 2 cut(s) 173, 288
FalI AAGNNNNNCTT 2 cut(s) 1811, 1843
FaqI GGGAC 1 cut(s) 1532
FauI CCCGC 2 cut(s) 37, 706
FokI GGATG 3 cut(s) 579, 701, 779
FriOI GRGCYC 1 cut(s) 1581
FspBI CTAG 6 cut(s) 350, 543, 549, 645, 908, 1007
GsuI CTGGAG 2 cut(s) 857, 1356
HaeII RGCGCY 4 cut(s) 128, 214, 276, 1413
HaeIII GGCC 6 cut(s) 743, 810, 912, 1758, 1790, 1816
HapII CCGG 5 cut(s) 41, 145, 214, 270, 401
HgaI GACGC 1 cut(s) 190
Hin1I GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
HincII GTYRAC 2 cut(s) 380, 427
HindII GTYRAC 2 cut(s) 380, 427
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 6 cut(s) 65, 263, 445, 1231, 1273, 1556
HpaI GTTAAC 1 cut(s) 427
HpaII CCGG 5 cut(s) 41, 145, 214, 270, 401
HphI GGTGA 4 cut(s) 272, 599, 616, 1600
Hpy166II GTNNAC 4 cut(s) 380, 427, 518, 1208
Hpy188I TCNGA 7 cut(s) 64, 100, 225, 450, 669, 817, 1498
Hpy188III TCNNGA 4 cut(s) 407, 938, 1103, 1832
Hpy8I GTNNAC 4 cut(s) 380, 427, 518, 1208
HpyAV CCTTC 4 cut(s) 722, 727, 1829, 1953
HpyCH4III ACNGT 5 cut(s) 384, 560, 751, 1468, 1973
HpyCH4IV ACGT 3 cut(s) 15, 482, 503
HpyF3I CTNAG 7 cut(s) 816, 1025, 1533, 1584, 1596, 1774, 1998
HpySE526I ACGT 3 cut(s) 15, 482, 503
Hsp92I GRCGYC 6 cut(s) 15, 125, 182, 211, 273, 503
KasI GGCGCC 3 cut(s) 124, 210, 272
KroI GCCGGC 2 cut(s) 213, 400
KroNI GCCGGC 2 cut(s) 215, 402
KspAI GTTAAC 1 cut(s) 427
Kzo9I GATC 4 cut(s) 450, 694, 1342, 1419
LguI GCTCTTC 1 cut(s) 993
LmnI GCTCC 5 cut(s) 103, 552, 1268, 1337, 1584
LweI GCATC 8 cut(s) 757, 1060, 1105, 1630, 1666, 1702, 1771, 1921
MaeI CTAG 6 cut(s) 350, 543, 549, 645, 908, 1007
MaeII ACGT 3 cut(s) 15, 482, 503
MaeIII GTNAC 4 cut(s) 188, 260, 1351, 1588
MalI GATC 4 cut(s) 452, 696, 1344, 1421
MboI GATC 4 cut(s) 450, 694, 1342, 1419
MfeI CAATTG 3 cut(s) 489, 1692, 1879
MflI RGATCY 1 cut(s) 1419
MhlI GDGCHC 2 cut(s) 392, 1581
MlsI TGGCCA 3 cut(s) 743, 1758, 1816
MluNI TGGCCA 3 cut(s) 743, 1758, 1816
Mly113I GGCGCC 3 cut(s) 125, 211, 273
MlyI GAGTC 5 cut(s) 74, 257, 454, 1267, 1550
Mox20I TGGCCA 3 cut(s) 743, 1758, 1816
Mph1103I ATGCAT 1 cut(s) 1681
MroNI GCCGGC 2 cut(s) 213, 400
MscI TGGCCA 3 cut(s) 743, 1758, 1816
MseI TTAA 7 cut(s) 426, 701, 762, 1034, 1085, 1328, 1542
MslI CAYNNNNRTG 2 cut(s) 73, 1213
Msp20I TGGCCA 3 cut(s) 743, 1758, 1816
MspA1I CMGCKG 5 cut(s) 121, 166, 1001, 1202, 1391
MspI CCGG 5 cut(s) 41, 145, 214, 270, 401
MspR9I CCNGG 3 cut(s) 42, 270, 585
MteI GCGCNGCGC 1 cut(s) 781
MunI CAATTG 3 cut(s) 489, 1692, 1879
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 1 cut(s) 585
MvnI CGCG 5 cut(s) 32, 187, 780, 785, 1525
NaeI GCCGGC 2 cut(s) 215, 402
NarI GGCGCC 3 cut(s) 125, 211, 273
NciI CCSGG 2 cut(s) 42, 270
NdeII GATC 4 cut(s) 450, 694, 1342, 1419
NgoMIV GCCGGC 2 cut(s) 213, 400
NlaIV GGNNCC 7 cut(s) 126, 212, 274, 949, 1243, 1403, 1704
NmeAIII GCCGAG 1 cut(s) 468
NmuCI GTSAC 3 cut(s) 188, 260, 1588
NsiI ATGCAT 1 cut(s) 1681
NspI RCATGY 4 cut(s) 118, 681, 1218, 1772
PaeI GCATGC 1 cut(s) 1218
PagI TCATGA 1 cut(s) 1102
PaqCI CACCTGC 1 cut(s) 1229
PauI GCGCGC 1 cut(s) 783
PceI AGGCCT 1 cut(s) 1790
PciSI GCTCTTC 1 cut(s) 993
PcsI WCGNNNNNNNCGW 2 cut(s) 446, 876
PctI GAATGC 1 cut(s) 676
PdiI GCCGGC 2 cut(s) 215, 402
PfeI GAWTC 1 cut(s) 1231
PflFI GACNNNGTC 1 cut(s) 505
PleI GAGTC 5 cut(s) 73, 257, 453, 1267, 1550
PluTI GGCGCC 3 cut(s) 128, 214, 276
PpsI GAGTC 5 cut(s) 73, 257, 453, 1267, 1550
PsiI TTATAA 1 cut(s) 1316
Psp124BI GAGCTC 1 cut(s) 1581
Psp6I CCWGG 1 cut(s) 583
PspGI CCWGG 1 cut(s) 583
PspN4I GGNNCC 7 cut(s) 126, 212, 274, 949, 1243, 1403, 1704
PspPI GGNCC 2 cut(s) 808, 1702
PstI CTGCAG 3 cut(s) 111, 1618, 1796
PstNI CAGNNNCTG 2 cut(s) 667, 1118
PsuI RGATCY 1 cut(s) 1419
PsyI GACNNNGTC 1 cut(s) 505
PteI GCGCGC 1 cut(s) 783
PvuII CAGCTG 3 cut(s) 166, 1202, 1391
RsaI GTAC 4 cut(s) 59, 682, 830, 1031
RsaNI GTAC 4 cut(s) 58, 681, 829, 1030
RseI CAYNNNNRTG 2 cut(s) 73, 1213
SacI GAGCTC 1 cut(s) 1581
SapI GCTCTTC 1 cut(s) 993
SaqAI TTAA 7 cut(s) 426, 701, 762, 1034, 1085, 1328, 1542
Sau3AI GATC 4 cut(s) 450, 694, 1342, 1419
Sau96I GGNCC 2 cut(s) 808, 1702
SbfI CCTGCAGG 1 cut(s) 1796
ScaI AGTACT 1 cut(s) 830
SchI GAGTC 5 cut(s) 74, 257, 454, 1267, 1550
ScrFI CCNGG 3 cut(s) 42, 270, 585
SdaI CCTGCAGG 1 cut(s) 1796
SduI GDGCHC 2 cut(s) 392, 1581
SfaNI GCATC 8 cut(s) 757, 1060, 1105, 1630, 1666, 1702, 1771, 1921
SfcI CTRYAG 6 cut(s) 107, 960, 981, 1511, 1614, 1792
SfoI GGCGCC 3 cut(s) 126, 212, 274
SinI GGWCC 1 cut(s) 1702
SmiMI CAYNNNNRTG 2 cut(s) 73, 1213
SmlI CTYRAG 2 cut(s) 938, 1481
SmoI CTYRAG 2 cut(s) 938, 1481
SphI GCATGC 1 cut(s) 1218
Sse8387I CCTGCAGG 1 cut(s) 1796
SseBI AGGCCT 1 cut(s) 1790
SspDI GGCGCC 3 cut(s) 124, 210, 272
SspMI CTAG 6 cut(s) 350, 543, 549, 645, 908, 1007
SstI GAGCTC 1 cut(s) 1581
StuI AGGCCT 1 cut(s) 1790
StyD4I CCNGG 3 cut(s) 40, 268, 583
StyI CCWWGG 3 cut(s) 548, 907, 1041
TaaI ACNGT 5 cut(s) 384, 560, 751, 1468, 1973
TaiI ACGT 3 cut(s) 18, 485, 506
TaqI TCGA 6 cut(s) 18, 753, 1732, 1831, 1905, 1929
TaqII GACCGA 1 cut(s) 326
TatI WGTACW 3 cut(s) 57, 680, 828
TauI GCSGC 9 cut(s) 37, 121, 130, 187, 211, 278, 281, 783, 1670
TfiI GAWTC 1 cut(s) 1231
Tru1I TTAA 7 cut(s) 426, 701, 762, 1034, 1085, 1328, 1542
Tru9I TTAA 7 cut(s) 426, 701, 762, 1034, 1085, 1328, 1542
TscAI CASTG 4 cut(s) 565, 973, 1215, 1572
TseFI GTSAC 3 cut(s) 188, 260, 1588
Tsp45I GTSAC 3 cut(s) 188, 260, 1588
TspDTI ATGAA 8 cut(s) 23, 317, 513, 741, 779, 884, 980, 1884
TspGWI ACGGA 2 cut(s) 267, 945
TspRI CASTG 4 cut(s) 565, 973, 1215, 1572
Tth111I GACNNNGTC 1 cut(s) 505
VpaK11BI GGWCC 1 cut(s) 1702
XapI RAATTY 1 cut(s) 219
XceI RCATGY 4 cut(s) 118, 681, 1218, 1772
XmaJI CCTAGG 2 cut(s) 548, 907
XspI CTAG 6 cut(s) 350, 543, 549, 645, 908, 1007
ZraI GACGTC 2 cut(s) 16, 504
ZrmI AGTACT 1 cut(s) 830
Zsp2I ATGCAT 1 cut(s) 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.