Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003453

Physical Location & Seq

Genomic Coordinates Forward (+)

20803537 .. 20806221

Gene Structure 2685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0145600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGATCTCATTCTGCAATCCCTGCAATCCCTGCAATCTTCACCCATGTTGCTCTTTCTTCTCCTTCTCCTACTTGCTTCCTTGATTTTCTTGTCTAGGTTAAGTAGAAAACTCCCATACCCACCAGGTCCAAAAGGGTTACCGATTATCGGTAACATGCTAATGATGGACCAGCTCACGCACCGGGGGCTAGCCCAACTTGGCAAGCTATACGGCGGTCTTGTCCATCTCCAAATAGGCGTGCTACACATCATGGCTGTATCAACCCCAAAAATGGCCCGTGAAATCCTCCAAGCCCAAGACAGCGTCTTTGCGAACCGGCCCGCTAATGTTGCAATTGCTTACTTGACGTATGACCGGGCCGACATGGCGTTTGCCAACTACGGCCCGTTTTGGCGTCGTATGCGCAAGATTTGCGTTATGAATCTATTTAGCCGAAAACGGGCCGAATCATGGGCCTCGGTACGTGAGGAAGTCAATGAATCGGTCCTCACTGTGGCGGAAAAAATTGGTTCACCGGTTAACATTGGGGAGTTGGTTTTCGCCCTCACGCGGAACATTACCTACCGAGCTGCGTTCGGCTCAAAATCGCACGAAGGGCAGGATGAATTTATGAAGATTTTGCAAGAATTTTCAAAGCTTTTTGGGGCATTCAATATGCAAGATTTTCTACCATGGTTGGGTTGGATGCATGCACAAGCATTCCAAAACAGAATGGCCAAAGCTCGCAAATCGTTAGATGTGTTCATAGATAAAATTATCGATGACCACATGGCTAAGAAGACTACTAAGAAAGATGACAGTGAGGCTGAGACAGATATGGTTGATGAATTACTCGCTTTCTTTGGAAATGATGCTCTAAACGAAGGTGACGACTCCAATTCTGCCTTTGCACTCACCAGAGATAATATCAAGGCGCTCATTATGGATGTGATGTTTGGAGGAACTGAGACTGTTGCATCAGTGATCGAATGGACCCTAGCTGAGCTAATGAAGAGTCCAGAAGATCTCAAAAAGGTTCAACAAGAGCTCGTCGATGTCGTAGGGTTGAGCCGTAGAGTCCAAGAAACCGACCTGGAGAACCTAACCTACCTCAAATGTGCAGTCAAGGAAGCCCTCCGTCTCCACCCACCAATCCCTCTCCTCCTCCACGAGGCCGTCGAGGACGGCGTCGTGGCCGGGTACTCGTTCCCCGCAGGGTCAAGGGTCTACATCAACGCGTGGGCGATAGGGCGTGATCCCTCTGCATGGGACGAGCCCGAAAAGTTTAAACCCTCCAGGTTTCTGAAAGATGGCTCCCCCGATTTCAAAGGGAGTGACTTCGAGTTCATCCCATTCGGGTCCGGCAGGAGGTCGTGCCCGGGGATGGCGCTCGGGCTTTATGGGTTGGAGATGGCTGTGGCTCATCTGCTTCATTGTTTTACGTGGGAGTTGCCGAATGGGATGAAGGCTAGTGAGCTTGACATGAACGATGTGTTTGGATTGACTGCACCCAAAGCTGTTCAGCTCGTTGCTGTGCCAAACTACAGGTTGAACTGCCCGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0031348 GO:0033612 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

515

Amino Acids

57.59

Weight (kDa)

5.99

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	41 - 499	8.1e-98	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003453)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04660 FvH4_2g17431
malus_domestica	MD05G1153200.v1.1 MD10G1147500.v1.1
prunus_persica	Prupe.8G186300_v2.0.a1 Prupe.8G186400_v2.0.a1 Prupe.8G186500_v2.0.a1 Prupe.8G186600_v2.0.a1
pyrus_communis	pycom05g14760 pycom10g12710 pycom10g12740
rosa_chinensis	RchiOBHm_Chr6g0281591 RchiOBHm_Chr6g0281611 RchiOBHm_Chr6g0282141
rosa_laevigata	RLG00000012906 RLG00000012907 RLG00000012959
rosa_multiflora	Rmu_sc0006897.1_g000004
rosa_roxburghii	Rroxscaffold_7G00186470
rosa_rugosa	Rorug06G0142000 Rorug06G0145600 Rorug06G0170000
rosa_samantha	Rh6AG047800 Rh6AG254400 Rh6AG258700 Rh6BG044300 Rh6BG257600 Rh6BG262000 Rh6BG262200 Rh6CG256700 Rh6CG261000 Rh6DG248500 Rh6DG248600 Rh6DG253000
rosa_wichuraiana	Rw6G022090 Rw6G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	407
AccI	GTMKAC	1 cut(s)	1209
AccII	CGCG	2 cut(s)	553, 1220
AciI	CCGC	6 cut(s)	216, 324, 500, 553, 1194, 1541
AclWI	GGATC	2 cut(s)	12, 1232
AcoI	YGGCCR	2 cut(s)	717, 1176
AcsI	RAATTY	2 cut(s)	608, 629
AcyI	GRCGYC	2 cut(s)	397, 1170
AfaI	GTAC	2 cut(s)	465, 1184
AflIII	ACRYGT	1 cut(s)	1218
AgeI	ACCGGT	1 cut(s)	517
AgsI	TTSAA	5 cut(s)	636, 655, 1022, 1309, 1534
AjnI	CCWGG	3 cut(s)	124, 1074, 1277
Alw21I	GWGCWC	1 cut(s)	1032
Alw26I	GTCTC	3 cut(s)	806, 944, 1127
AlwI	GGATC	2 cut(s)	12, 1232
Ama87I	CYCGRG	2 cut(s)	1360, 1373
AoxI	GGCC	9 cut(s)	276, 320, 360, 385, 444, 456, 717, 1155, 1176
ApeKI	GCWGC	1 cut(s)	572
ApoI	RAATTY	2 cut(s)	608, 629
ArsI	GACNNNNNNTTYG	6 cut(s)	293, 325, 356, 388, 1089, 1121
AsiGI	ACCGGT	1 cut(s)	517
AspLEI	GCGC	3 cut(s)	408, 919, 1372
AsuC2I	CCSGG	5 cut(s)	185, 359, 1180, 1361, 1362
AsuHPI	GGTGA	4 cut(s)	33, 507, 881, 889
AsuNHI	GCTAGC	1 cut(s)	190
AvaI	CYCGRG	2 cut(s)	1360, 1373
AvaII	GGWCC	5 cut(s)	128, 169, 487, 975, 1341
BaeGI	GKGCMC	1 cut(s)	1361
BalI	TGGCCA	1 cut(s)	719
BanII	GRGCYC	2 cut(s)	1032, 1260
BauI	CACGAG	1 cut(s)	1151
BbsI	GAAGAC	1 cut(s)	788
Bbv12I	GWGCWC	1 cut(s)	1032
BbvI	GCAGC	1 cut(s)	559
BccI	CCATC	5 cut(s)	160, 234, 1286, 1360, 1387
BceAI	ACGGC	5 cut(s)	229, 400, 1038, 1142, 1183
BciT130I	CCWGG	3 cut(s)	126, 1076, 1279
BcnI	CCSGG	5 cut(s)	185, 359, 1180, 1361, 1362
BcoDI	GTCTC	3 cut(s)	806, 944, 1127
BfaI	CTAG	4 cut(s)	96, 191, 980, 1452
BfmI	CTRYAG	1 cut(s)	1525
BfoI	RGCGCY	2 cut(s)	920, 1373
BglI	GCCNNNNNGGC	1 cut(s)	368
BglII	AGATCT	1 cut(s)	1006
BisI	GCNGC	1 cut(s)	573
BlpI	GCTNAGC	1 cut(s)	984
BlsI	GCNGC	1 cut(s)	574
Bme1390I	CCNGG	8 cut(s)	126, 185, 359, 1076, 1180, 1279, 1361, 1362
Bme18I	GGWCC	5 cut(s)	128, 169, 487, 975, 1341
BmeT110I	CYCGRG	2 cut(s)	1360, 1373
BmiI	GGNNCC	3 cut(s)	977, 1297, 1342
BmrFI	CCNGG	8 cut(s)	126, 185, 359, 1076, 1180, 1279, 1361, 1362
BmsI	GCATC	3 cut(s)	678, 844, 968
BmtI	GCTAGC	1 cut(s)	194
BpiI	GAAGAC	1 cut(s)	788
BpmI	CTGGAG	2 cut(s)	1097, 1261
Bpu1102I	GCTNAGC	1 cut(s)	984
BpuMI	CCSGG	5 cut(s)	185, 359, 1180, 1361, 1362
Bsa29I	ATCGAT	1 cut(s)	762
BsaAI	YACGTR	2 cut(s)	467, 1425
BsaHI	GRCGYC	2 cut(s)	397, 1170
BsaJI	CCNNGG	5 cut(s)	184, 459, 674, 1360, 1361
BsaWI	WCCGGW	1 cut(s)	517
Bse118I	RCCGGY	2 cut(s)	318, 517
BseBI	CCWGG	3 cut(s)	126, 1076, 1279
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	5 cut(s)	184, 459, 674, 1360, 1361
BseGI	GGATG	6 cut(s)	610, 693, 934, 1329, 1371, 1449
BseMII	CTCAG	3 cut(s)	801, 939, 975
BseRI	GAGGAG	2 cut(s)	1133, 1136
BseSI	GKGCMC	1 cut(s)	1361
BseXI	GCAGC	1 cut(s)	559
BsgI	GTGCAG	2 cut(s)	1122, 1473
Bsh1236I	CGCG	2 cut(s)	553, 1220
BshFI	GGCC	9 cut(s)	278, 322, 362, 387, 446, 458, 719, 1157, 1178
BshTI	ACCGGT	1 cut(s)	517
BshVI	ATCGAT	1 cut(s)	762
BsiHKAI	GWGCWC	1 cut(s)	1032
BsiHKCI	CYCGRG	2 cut(s)	1360, 1373
BsiSI	CCGG	7 cut(s)	184, 319, 358, 518, 1179, 1344, 1361
BslFI	GGGAC	1 cut(s)	1265
BsmAI	GTCTC	3 cut(s)	806, 944, 1127
BsmBI	CGTCTC	1 cut(s)	1127
BsmFI	GGGAC	1 cut(s)	1265
BsmI	GAATGC	2 cut(s)	650, 701
BsnI	GGCC	9 cut(s)	278, 322, 362, 387, 446, 458, 719, 1157, 1178
BsoBI	CYCGRG	2 cut(s)	1360, 1373
Bsp1286I	GDGCHC	3 cut(s)	1032, 1260, 1361
Bsp143I	GATC	4 cut(s)	4, 966, 1006, 1237
Bsp1720I	GCTNAGC	1 cut(s)	984
Bsp19I	CCATGG	1 cut(s)	674
BspACI	CCGC	6 cut(s)	216, 324, 500, 553, 1194, 1541
BspANI	GGCC	9 cut(s)	278, 322, 362, 387, 446, 458, 719, 1157, 1178
BspCNI	CTCAG	3 cut(s)	802, 940, 976
BspDI	ATCGAT	1 cut(s)	762
BspFNI	CGCG	2 cut(s)	553, 1220
BspLI	GGNNCC	3 cut(s)	977, 1297, 1342
BspOI	GCTAGC	1 cut(s)	194
BspPI	GGATC	2 cut(s)	12, 1232
BsrFI	RCCGGY	2 cut(s)	318, 517
BssAI	RCCGGY	2 cut(s)	318, 517
BssECI	CCNNGG	5 cut(s)	184, 459, 674, 1360, 1361
BssMI	GATC	4 cut(s)	4, 966, 1006, 1237
BssNI	GRCGYC	2 cut(s)	397, 1170
BssSI	CACGAG	1 cut(s)	1151
BssT1I	CCWWGG	1 cut(s)	674
Bst2BI	CACGAG	1 cut(s)	1151
Bst2UI	CCWGG	3 cut(s)	126, 1076, 1279
Bst4CI	ACNGT	3 cut(s)	496, 803, 955
Bst6I	CTCTTC	1 cut(s)	989
BstACI	GRCGYC	2 cut(s)	397, 1170
BstAPI	GCANNNNNTGC	3 cut(s)	22, 31, 414
BstBAI	YACGTR	2 cut(s)	467, 1425
BstC8I	GCNNGC	7 cut(s)	192, 206, 242, 324, 693, 727, 1541
BstDEI	CTNAG	5 cut(s)	777, 789, 810, 948, 984
BstDSI	CCRYGG	1 cut(s)	674
BstEII	GGTNACC	1 cut(s)	138
BstENI	CCTNNNNNAGG	1 cut(s)	1151
BstF5I	GGATG	6 cut(s)	610, 693, 934, 1329, 1371, 1449
BstFNI	CGCG	2 cut(s)	553, 1220
BstH2I	RGCGCY	2 cut(s)	920, 1373
BstHHI	GCGC	3 cut(s)	408, 919, 1372
BstKTI	GATC	4 cut(s)	7, 969, 1009, 1240
BstMAI	GTCTC	3 cut(s)	806, 944, 1127
BstMBI	GATC	4 cut(s)	4, 966, 1006, 1237
BstMWI	GCNNNNNNNGC	9 cut(s)	22, 31, 187, 332, 368, 403, 414, 598, 1496
BstNI	CCWGG	3 cut(s)	126, 1076, 1279
BstNSI	RCATGY	2 cut(s)	160, 695
BstPI	GGTNACC	1 cut(s)	138
BstSCI	CCNGG	8 cut(s)	124, 183, 357, 1074, 1178, 1277, 1359, 1360
BstSFI	CTRYAG	1 cut(s)	1525
BstSLI	GKGCMC	1 cut(s)	1361
BstUI	CGCG	2 cut(s)	553, 1220
BstV1I	GCAGC	1 cut(s)	559
BstV2I	GAAGAC	1 cut(s)	788
BstX2I	RGATCY	2 cut(s)	4, 1006
BstYI	RGATCY	2 cut(s)	4, 1006
Bsu15I	ATCGAT	1 cut(s)	762
BsuRI	GGCC	9 cut(s)	278, 322, 362, 387, 446, 458, 719, 1157, 1178
BsuTUI	ATCGAT	1 cut(s)	762
BtgI	CCRYGG	1 cut(s)	674
BtsCI	GGATG	6 cut(s)	610, 693, 934, 1329, 1371, 1449
BtsIMutI	CAGTG	3 cut(s)	492, 808, 969
Cac8I	GCNNGC	7 cut(s)	192, 206, 242, 324, 693, 727, 1541
CfoI	GCGC	3 cut(s)	408, 919, 1372
Cfr10I	RCCGGY	2 cut(s)	318, 517
Cfr9I	CCCGGG	1 cut(s)	1360
ClaI	ATCGAT	1 cut(s)	762
CseI	GACGC	3 cut(s)	295, 386, 1159
CsiI	ACCWGGT	1 cut(s)	124
Csp6I	GTAC	2 cut(s)	464, 1183
CspAI	ACCGGT	1 cut(s)	517
CviQI	GTAC	2 cut(s)	464, 1183
DdeI	CTNAG	5 cut(s)	777, 789, 810, 948, 984
DpnI	GATC	4 cut(s)	6, 968, 1008, 1239
DpnII	GATC	4 cut(s)	4, 966, 1006, 1237
DraI	TTTAAA	1 cut(s)	1270
EaeI	YGGCCR	2 cut(s)	717, 1176
Eam1104I	CTCTTC	1 cut(s)	989
EarI	CTCTTC	1 cut(s)	989
EciI	GGCGGA	1 cut(s)	515
Ecl136II	GAGCTC	1 cut(s)	1030
Eco130I	CCWWGG	1 cut(s)	674
Eco24I	GRGCYC	2 cut(s)	1032, 1260
Eco47I	GGWCC	5 cut(s)	128, 169, 487, 975, 1341
Eco53kI	GAGCTC	1 cut(s)	1030
Eco88I	CYCGRG	2 cut(s)	1360, 1373
Eco91I	GGTNACC	1 cut(s)	138
EcoICRI	GAGCTC	1 cut(s)	1030
EcoNI	CCTNNNNNAGG	1 cut(s)	1151
EcoO65I	GGTNACC	1 cut(s)	138
EcoRII	CCWGG	3 cut(s)	124, 1074, 1277
EcoT14I	CCWWGG	1 cut(s)	674
EcoT22I	ATGCAT	1 cut(s)	693
EcoT38I	GRGCYC	2 cut(s)	1032, 1260
ErhI	CCWWGG	1 cut(s)	674
Esp3I	CGTCTC	1 cut(s)	1127
FaqI	GGGAC	1 cut(s)	1265
FauI	CCCGC	2 cut(s)	331, 1201
FblI	GTMKAC	1 cut(s)	1209
Fnu4HI	GCNGC	1 cut(s)	573
FokI	GGATG	6 cut(s)	617, 700, 941, 1316, 1378, 1456
FriOI	GRGCYC	2 cut(s)	1032, 1260
Fsp4HI	GCNGC	1 cut(s)	573
FspBI	CTAG	4 cut(s)	96, 191, 980, 1452
FspI	TGCGCA	1 cut(s)	407
GlaI	GCGC	3 cut(s)	407, 918, 1371
GluI	GCNGC	1 cut(s)	573
GsuI	CTGGAG	2 cut(s)	1097, 1261
HaeII	RGCGCY	2 cut(s)	920, 1373
HaeIII	GGCC	9 cut(s)	278, 322, 362, 387, 446, 458, 719, 1157, 1178
HapII	CCGG	7 cut(s)	184, 319, 358, 518, 1179, 1344, 1361
HgaI	GACGC	3 cut(s)	295, 386, 1159
HhaI	GCGC	3 cut(s)	408, 919, 1372
Hin1I	GRCGYC	2 cut(s)	397, 1170
Hin6I	GCGC	3 cut(s)	406, 917, 1370
HinP1I	GCGC	3 cut(s)	406, 917, 1370
HincII	GTYRAC	1 cut(s)	523
HindII	GTYRAC	1 cut(s)	523
HindIII	AAGCTT	1 cut(s)	638
HinfI	GANTC	6 cut(s)	424, 449, 482, 875, 997, 1059
HpaI	GTTAAC	1 cut(s)	523
HpaII	CCGG	7 cut(s)	184, 319, 358, 518, 1179, 1344, 1361
HphI	GGTGA	4 cut(s)	33, 507, 881, 889
Hpy166II	GTNNAC	3 cut(s)	515, 523, 1210
Hpy188I	TCNGA	1 cut(s)	1287
Hpy188III	TCNNGA	1 cut(s)	1001
Hpy8I	GTNNAC	3 cut(s)	515, 523, 1210
Hpy99I	CGWCG	4 cut(s)	402, 1037, 1163, 1175
HpyAV	CCTTC	4 cut(s)	74, 590, 860, 1441
HpyCH4III	ACNGT	3 cut(s)	496, 803, 955
HpyCH4IV	ACGT	3 cut(s)	350, 466, 1424
HpyF10VI	GCNNNNNNNGC	9 cut(s)	22, 31, 187, 332, 368, 403, 414, 598, 1496
HpyF3I	CTNAG	5 cut(s)	777, 789, 810, 948, 984
HpySE526I	ACGT	3 cut(s)	350, 466, 1424
Hsp92I	GRCGYC	2 cut(s)	397, 1170
HspAI	GCGC	3 cut(s)	406, 917, 1370
KspAI	GTTAAC	1 cut(s)	523
Kzo9I	GATC	4 cut(s)	4, 966, 1006, 1237
LmnI	GCTCC	1 cut(s)	1301
Lsp1109I	GCAGC	1 cut(s)	559
LweI	GCATC	3 cut(s)	678, 844, 968
MabI	ACCWGGT	1 cut(s)	124
MaeI	CTAG	4 cut(s)	96, 191, 980, 1452
MaeII	ACGT	3 cut(s)	350, 466, 1424
MaeIII	GTNAC	4 cut(s)	138, 152, 869, 1316
MalI	GATC	4 cut(s)	6, 968, 1008, 1239
MboI	GATC	4 cut(s)	4, 966, 1006, 1237
MboII	GAAGA	6 cut(s)	30, 50, 628, 793, 1006, 1016
MfeI	CAATTG	1 cut(s)	336
MflI	RGATCY	2 cut(s)	4, 1006
MhlI	GDGCHC	3 cut(s)	1032, 1260, 1361
MlsI	TGGCCA	1 cut(s)	719
MluCI	AATT	7 cut(s)	336, 507, 608, 629, 756, 830, 880
MluI	ACGCGT	1 cut(s)	1218
MluNI	TGGCCA	1 cut(s)	719
MlyI	GAGTC	3 cut(s)	869, 1006, 1068
MmeI	TCCRAC	2 cut(s)	665, 1368
Mox20I	TGGCCA	1 cut(s)	719
Mph1103I	ATGCAT	1 cut(s)	693
MscI	TGGCCA	1 cut(s)	719
MseI	TTAA	3 cut(s)	101, 522, 1269
MslI	CAYNNNNRTG	1 cut(s)	161
Msp20I	TGGCCA	1 cut(s)	719
MspI	CCGG	7 cut(s)	184, 319, 358, 518, 1179, 1344, 1361
MspR9I	CCNGG	8 cut(s)	126, 185, 359, 1076, 1180, 1279, 1361, 1362
MssI	GTTTAAAC	1 cut(s)	1270
MunI	CAATTG	1 cut(s)	336
Mva1269I	GAATGC	2 cut(s)	650, 701
MvaI	CCWGG	3 cut(s)	126, 1076, 1279
MvnI	CGCG	2 cut(s)	553, 1220
MwoI	GCNNNNNNNGC	9 cut(s)	22, 31, 187, 332, 368, 403, 414, 598, 1496
NciI	CCSGG	5 cut(s)	185, 359, 1180, 1361, 1362
NcoI	CCATGG	1 cut(s)	674
NdeII	GATC	4 cut(s)	4, 966, 1006, 1237
NheI	GCTAGC	1 cut(s)	190
NlaIV	GGNNCC	3 cut(s)	977, 1297, 1342
NmuCI	GTSAC	2 cut(s)	869, 1316
NsbI	TGCGCA	1 cut(s)	407
NsiI	ATGCAT	1 cut(s)	693
NspI	RCATGY	2 cut(s)	160, 695
PaeI	GCATGC	1 cut(s)	695
PcsI	WCGNNNNNNNCGW	4 cut(s)	870, 1038, 1158, 1167
PctI	GAATGC	2 cut(s)	650, 701
PfeI	GAWTC	3 cut(s)	424, 449, 482
PflFI	GACNNNGTC	2 cut(s)	305, 1169
PinAI	ACCGGT	1 cut(s)	517
PkrI	GCNGC	1 cut(s)	574
PleI	GAGTC	3 cut(s)	869, 1005, 1067
PmeI	GTTTAAAC	1 cut(s)	1270
PpsI	GAGTC	3 cut(s)	869, 1005, 1067
Ppu21I	YACGTR	2 cut(s)	467, 1425
Psp124BI	GAGCTC	1 cut(s)	1032
Psp6I	CCWGG	3 cut(s)	124, 1074, 1277
PspEI	GGTNACC	1 cut(s)	138
PspGI	CCWGG	3 cut(s)	124, 1074, 1277
PspN4I	GGNNCC	3 cut(s)	977, 1297, 1342
PsrI	GAACNNNNNNTAC	4 cut(s)	548, 580, 1073, 1105
PsuI	RGATCY	2 cut(s)	4, 1006
PsyI	GACNNNGTC	2 cut(s)	305, 1169
RsaI	GTAC	2 cut(s)	465, 1184
RsaNI	GTAC	2 cut(s)	464, 1183
RseI	CAYNNNNRTG	1 cut(s)	161
SacI	GAGCTC	1 cut(s)	1032
SaqAI	TTAA	3 cut(s)	101, 522, 1269
SatI	GCNGC	1 cut(s)	573
Sau3AI	GATC	4 cut(s)	4, 966, 1006, 1237
SchI	GAGTC	3 cut(s)	869, 1006, 1068
ScrFI	CCNGG	8 cut(s)	126, 185, 359, 1076, 1180, 1279, 1361, 1362
SduI	GDGCHC	3 cut(s)	1032, 1260, 1361
SexAI	ACCWGGT	1 cut(s)	124
SfaNI	GCATC	3 cut(s)	678, 844, 968
SfcI	CTRYAG	1 cut(s)	1525
SinI	GGWCC	5 cut(s)	128, 169, 487, 975, 1341
SmaI	CCCGGG	1 cut(s)	1362
SmiMI	CAYNNNNRTG	1 cut(s)	161
SphI	GCATGC	1 cut(s)	695
Sse9I	AATT	7 cut(s)	336, 507, 608, 629, 756, 830, 880
SsiI	CCGC	6 cut(s)	216, 324, 500, 553, 1194, 1541
SspMI	CTAG	4 cut(s)	96, 191, 980, 1452
SstI	GAGCTC	1 cut(s)	1032
StyD4I	CCNGG	8 cut(s)	124, 183, 357, 1074, 1178, 1277, 1359, 1360
StyI	CCWWGG	1 cut(s)	674
TaaI	ACNGT	3 cut(s)	496, 803, 955
TaiI	ACGT	3 cut(s)	353, 469, 1427
TaqI	TCGA	5 cut(s)	762, 969, 1035, 1161, 1323
TaqII	GACCGA	1 cut(s)	475
TasI	AATT	7 cut(s)	336, 507, 608, 629, 756, 830, 880
TfiI	GAWTC	3 cut(s)	424, 449, 482
Tru1I	TTAA	3 cut(s)	101, 522, 1269
Tru9I	TTAA	3 cut(s)	101, 522, 1269
TscAI	CASTG	3 cut(s)	499, 808, 969
TseFI	GTSAC	2 cut(s)	869, 1316
TseI	GCWGC	1 cut(s)	572
Tsp45I	GTSAC	2 cut(s)	869, 1316
TspGWI	ACGGA	1 cut(s)	1109
TspMI	CCCGGG	1 cut(s)	1360
TspRI	CASTG	3 cut(s)	499, 808, 969
Tth111I	GACNNNGTC	2 cut(s)	305, 1169
VpaK11BI	GGWCC	5 cut(s)	128, 169, 487, 975, 1341
XagI	CCTNNNNNAGG	1 cut(s)	1151
XapI	RAATTY	2 cut(s)	608, 629
XceI	RCATGY	2 cut(s)	160, 695
XcmI	CCANNNNNNNNNTGG	1 cut(s)	681
XmaI	CCCGGG	1 cut(s)	1360
XmiI	GTMKAC	1 cut(s)	1209
XspI	CTAG	4 cut(s)	96, 191, 980, 1452
Zsp2I	ATGCAT	1 cut(s)	693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.