Rorug06G0387500

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002860
Physical Location & Seq
Forward (+)
53271516 .. 53275343
3828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0387500.1

Sequence Viewer

Length: 1959 bp
ATGGAGCTCTGGAGTGCTTTGTCTTTGCTTCTTCTTTCTGCATTCCAGCTTGTTTCTGCACAAACAACCACTTCTCCTGATGAAGTTACTGCTCTCCACAAGGTAGTAGAACACTGGAACTTGGTAAATCACTTGAATCTTACCATTGACCCCTGCACTGAAAATGCAACATGGGCATCTGGAACTGCGAATCCCCGTGTGGCTTGCGATTGTACAGGCAGCGCCTGCCATATTACTCACCTGAAGATATATGCCTTGGACATAATTGGTGATCTACCAGGAGAACTATTTGAGCTAAAGCAGCTAATAGACTTGAATCTTGGTCAGAATGTATTAAGCGGGCGCATTCCTCCTGAAATAGGACTGTTATCCAACATGCAGTATCTTAGCTTAGGCGTAAACAATCTGTCAGGTCCAGTTCCATCAGAGCTTGGCAACTTGGCCAAGTTGGTTGAGCTAAGTTTTAGCTCAAACCAGTTCTCTGGACCATTGCCCTTGGACCTTGGAAAACTGACCTCCTTGCAGCAGTTGTACGTAGACAGCAGTGGAGTAACTGGACCAATTCCACAGGAGCTTTCAAACTTAAAATCCCTTCAAACTTTCTGGGCATCTGATAATCTCTTCACCGGAAAACTCCCACAGTTCTTAGGGACTCTTACAGAACTCATAGACTTGCGACTTGAAGGCACGTTGCTTGATGGACCAATTCCAAGCAATTTTGGTGCTCTAACCAAACTAGACATCTTGAGAATTGGTGATCTTAGCAACGAAGATTCTTCTCTTGATTTTTTGGAAAATCTAACAAGTTTGTCCATGCTGTCTTTGAGAAGTTGTCGAGTATCTAGAGAAATTCCTGAACAAATTGGAAAGTTTTCCAAGTTGCAATACCTAGATTTGAGATTCAACAAGTTGACTGGCTCAATACCAAACTCATTCCAAGATGTTACTGTGCTGCAATTTCTATATCTTGGAAACAATTACTTGAGTGGAGAACTACCTACAAGTATCGTAAGTCCACAGCTTATTGCACTAGATGTTTCCTTCAATCCAATATCTGGCAATTTACCTTCAAATTTCTCCACAGAAGGATTTTCACTGAATGTGATTGGTACATCCATCAATGCAAATGGTTTATCAGACAGTGGGGAACCTGGATTGTTGCATTGTCTCCAAGGAGACACCAAGTGCAGTAATAAACTACCAGCATCTTCATTTTCTATTAAATGTGGATGCACAAGCCAGAAATCTGTATCTGGGATCGAATACGATGATGATTCTGAAATCCTGGGAGCTGCTTCATCCTACAAAAGCTCTAGAAATCAATGGGCGGTGAGCAACACAGGAAACTTCCTTTTCAACTCAAACGGACCTCAATACATAGCAAACACAGATTCTCAAATCACCGAAACATTAGAGTCAGAGCTGTACAAGACAGCAAGAATCTCACCAACCTCACTTAGGTACTATGGCCTAGATTTGAAGAACGGAAAATATGTCGTTGTGCTTCACTTTGCAGAGTTGCAAATGGAGGAAACAAATTCCTGGAAAGGTCTCGGAAGGCGCTTGTTTGATGTCTACATTCAGGGTGAGAGAGTGGTCCAAGACTTGAACATTCAGAAGGAAGCAGGGGGATCCAAGAAGGCATTGATCAAAACATTCGAGACAAACGTGTCAAACACAATTATGGACATCCATTTCCTGTGGGCTGGAAAAGGCACTTGCTGCATTCCATATCAAGGCACATATGGACCTCTGGTCTCAGCAATCCATGTTTATCAAGTCTCGGATGCCGGGTCTTCTTCGAAAAGCGAGAGGAAGCGTGTGGGAAGGATTGTGGGAGTGTCATTTGGATGTGCAGCTGTTGTGATCATAATGTCATCAGTGTTCTACCTATGGTGGATTAAAGATGATGCTGAACCCAGACATGTGAGGATACATAGAGAGATGCGCAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

652

Amino Acids

71.35

Weight (kDa)

5.43

Isoelectric Point (pI)

35.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 73 - 180 1.8e-07 Leucine-rich repeat region
LRR_14 PF23598 168 - 273 3e-08 Leucine-rich repeat region
LRR_14 PF23598 254 - 327 5.1e-08 Leucine-rich repeat region
LRR_8 PF13855 269 - 328 4.5e-08 Leucine rich repeat
Malectin PF11721 405 - 589 2.3e-40 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1669
Acc16I TGCGCA 1 cut(s) 1949
AccB7I CCANNNNNTGG 1 cut(s) 1055
AccI GTMKAC 2 cut(s) 537, 1575
AciI CCGC 2 cut(s) 339, 1328
AclWI GGATC 3 cut(s) 1265, 1626, 1639
AcoI YGGCCR 1 cut(s) 441
AcsI RAATTY 3 cut(s) 849, 1072, 1537
AcuI CTGAAG 1 cut(s) 263
AdeI CACNNNGTG 1 cut(s) 1185
AfaI GTAC 5 cut(s) 214, 533, 1111, 1427, 1463
AfiI CCNNNNNNNGG 4 cut(s) 359, 1055, 1458, 1736
AflIII ACRYGT 2 cut(s) 1668, 1924
AhdI GACNNNNNGTC 1 cut(s) 1754
AjnI CCWGG 4 cut(s) 277, 1150, 1284, 1541
AloI GAACNNNNNNTCC 2 cut(s) 175, 207
Alw21I GWGCWC 2 cut(s) 9, 727
Alw26I GTCTC 6 cut(s) 1170, 1172, 1556, 1655, 1762, 1786
AlwI GGATC 3 cut(s) 1265, 1626, 1639
AlwNI CAGNNNCTG 1 cut(s) 225
AoxI GGCC 2 cut(s) 441, 1468
ApeKI GCWGC 7 cut(s) 219, 301, 523, 952, 1292, 1722, 1856
ApoI RAATTY 3 cut(s) 849, 1072, 1537
Asp700I GAANNNNTTC 1 cut(s) 871
AspLEI GCGC 4 cut(s) 224, 345, 1563, 1950
AspS9I GGNCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
AsuC2I CCSGG 1 cut(s) 1792
AsuHPI GGTGA 8 cut(s) 230, 281, 616, 767, 1342, 1393, 1437, 1598
AsuII TTCGAA 1 cut(s) 1802
AvaII GGWCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
BalI TGGCCA 1 cut(s) 443
BamHI GGATCC 1 cut(s) 1631
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 1788
Bbv12I GWGCWC 2 cut(s) 9, 727
BbvI GCAGC 7 cut(s) 231, 313, 535, 939, 1279, 1709, 1868
BccI CCATC 3 cut(s) 430, 692, 1124
BciT130I CCWGG 4 cut(s) 279, 1152, 1286, 1543
BciVI GTATCC 1 cut(s) 1926
BclI TGATCA 2 cut(s) 1647, 1866
BcnI CCSGG 1 cut(s) 1792
BcoDI GTCTC 6 cut(s) 1170, 1172, 1556, 1655, 1762, 1786
BfaI CTAG 6 cut(s) 737, 843, 890, 1031, 1314, 1472
BfoI RGCGCY 2 cut(s) 225, 1564
BfuI GTATCC 1 cut(s) 1926
BisI GCNGC 7 cut(s) 220, 302, 524, 953, 1293, 1723, 1857
BlsI GCNGC 7 cut(s) 221, 303, 525, 954, 1294, 1724, 1858
Bme1390I CCNGG 5 cut(s) 279, 1152, 1286, 1543, 1792
Bme18I GGWCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
BmeRI GACNNNNNGTC 1 cut(s) 1754
BmgT120I GGNCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
BmiI GGNNCC 2 cut(s) 1149, 1633
BmrFI CCNGG 5 cut(s) 279, 1152, 1286, 1543, 1792
BmsI GCATC 7 cut(s) 185, 617, 1214, 1220, 1777, 1900, 1935
BpiI GAAGAC 1 cut(s) 1788
BpmI CTGGAG 1 cut(s) 31
Bpu10I CCTNAGC 1 cut(s) 391
Bpu14I TTCGAA 1 cut(s) 1802
BpuEI CTTGAG 2 cut(s) 766, 1003
BpuMI CCSGG 1 cut(s) 1792
BsaAI YACGTR 1 cut(s) 535
BsaI GGTCTC 2 cut(s) 1556, 1762
BsaJI CCNNGG 5 cut(s) 255, 495, 502, 1171, 1285
BsaWI WCCGGW 1 cut(s) 626
BsaXI ACNNNNNCTCC 2 cut(s) 58, 88
Bsc4I CCNNNNNNNGG 4 cut(s) 359, 1055, 1458, 1736
Bse1I ACTGG 5 cut(s) 119, 416, 475, 559, 919
Bse3DI GCAATG 1 cut(s) 488
BseBI CCWGG 4 cut(s) 279, 1152, 1286, 1543
BseDI CCNNGG 5 cut(s) 255, 495, 502, 1171, 1285
BseGI GGATG 6 cut(s) 1112, 1235, 1298, 1689, 1792, 1856
BseLI CCNNNNNNNGG 4 cut(s) 359, 1055, 1458, 1736
BseMI GCAATG 1 cut(s) 488
BseMII CTCAG 1 cut(s) 1773
BseNI ACTGG 5 cut(s) 119, 416, 475, 559, 919
BseXI GCAGC 7 cut(s) 231, 313, 535, 939, 1279, 1709, 1868
BsgI GTGCAG 4 cut(s) 42, 139, 1207, 1875
BshFI GGCC 2 cut(s) 443, 1470
BsiHKAI GWGCWC 2 cut(s) 9, 727
BsiSI CCGG 2 cut(s) 627, 1791
BslFI GGGAC 1 cut(s) 664
BslI CCNNNNNNNGG 4 cut(s) 359, 1055, 1458, 1736
BsmAI GTCTC 6 cut(s) 1170, 1172, 1556, 1655, 1762, 1786
BsmFI GGGAC 1 cut(s) 664
BsmI GAATGC 3 cut(s) 41, 345, 1725
BsnI GGCC 2 cut(s) 443, 1470
Bso31I GGTCTC 2 cut(s) 1556, 1762
Bsp119I TTCGAA 1 cut(s) 1802
Bsp1286I GDGCHC 2 cut(s) 9, 727
Bsp1407I TGTACA 2 cut(s) 212, 1425
Bsp143I GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
BspACI CCGC 2 cut(s) 339, 1328
BspANI GGCC 2 cut(s) 443, 1470
BspCNI CTCAG 1 cut(s) 1772
BspLI GGNNCC 2 cut(s) 1149, 1633
BspPI GGATC 3 cut(s) 1265, 1626, 1639
BspT104I TTCGAA 1 cut(s) 1802
BspTNI GGTCTC 2 cut(s) 1556, 1762
BsrDI GCAATG 1 cut(s) 488
BsrGI TGTACA 2 cut(s) 212, 1425
BsrI ACTGG 5 cut(s) 119, 416, 475, 559, 919
BssECI CCNNGG 5 cut(s) 255, 495, 502, 1171, 1285
BssMI GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
BssT1I CCWWGG 4 cut(s) 255, 495, 502, 1171
Bst2UI CCWGG 4 cut(s) 279, 1152, 1286, 1543
Bst4CI ACNGT 4 cut(s) 366, 642, 949, 1142
Bst6I CTCTTC 1 cut(s) 626
BstAPI GCANNNNNTGC 2 cut(s) 225, 1722
BstAUI TGTACA 2 cut(s) 212, 1425
BstBAI YACGTR 1 cut(s) 535
BstBI TTCGAA 1 cut(s) 1802
BstC8I GCNNGC 3 cut(s) 205, 226, 341
BstDEI CTNAG 7 cut(s) 386, 391, 458, 646, 761, 1457, 1759
BstENI CCTNNNNNAGG 2 cut(s) 357, 1456
BstF5I GGATG 6 cut(s) 1112, 1235, 1298, 1689, 1792, 1856
BstH2I RGCGCY 2 cut(s) 225, 1564
BstHHI GCGC 4 cut(s) 224, 345, 1563, 1950
BstKTI GATC 6 cut(s) 274, 760, 1260, 1634, 1650, 1869
BstMAI GTCTC 6 cut(s) 1170, 1172, 1556, 1655, 1762, 1786
BstMBI GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
BstMWI GCNNNNNNNGC 4 cut(s) 173, 225, 301, 1722
BstNI CCWGG 4 cut(s) 279, 1152, 1286, 1543
BstNSI RCATGY 2 cut(s) 379, 1928
BstSCI CCNGG 5 cut(s) 277, 1150, 1284, 1541, 1790
BstSNI TACGTA 1 cut(s) 535
BstV1I GCAGC 7 cut(s) 231, 313, 535, 939, 1279, 1709, 1868
BstV2I GAAGAC 1 cut(s) 1788
BstX2I RGATCY 1 cut(s) 1631
BstXI CCANNNNNNTGG 1 cut(s) 482
BstYI RGATCY 1 cut(s) 1631
BsuI GTATCC 1 cut(s) 1926
BsuRI GGCC 2 cut(s) 443, 1470
BtsCI GGATG 6 cut(s) 1112, 1235, 1298, 1689, 1792, 1856
BtsI GCAGTG 1 cut(s) 550
BtsIMutI CAGTG 6 cut(s) 112, 156, 550, 1094, 1147, 1887
Cac8I GCNNGC 3 cut(s) 205, 226, 341
CaiI CAGNNNCTG 1 cut(s) 225
CfoI GCGC 4 cut(s) 224, 345, 1563, 1950
Cfr13I GGNCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
Csp6I GTAC 5 cut(s) 213, 532, 1110, 1426, 1462
CviAII CATG 5 cut(s) 171, 376, 814, 1769, 1925
CviQI GTAC 5 cut(s) 213, 532, 1110, 1426, 1462
DdeI CTNAG 7 cut(s) 386, 391, 458, 646, 761, 1457, 1759
DpnI GATC 6 cut(s) 273, 759, 1259, 1633, 1649, 1868
DpnII GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
DraIII CACNNNGTG 1 cut(s) 1185
DrdI GACNNNNNNGTC 1 cut(s) 1669
DriI GACNNNNNGTC 1 cut(s) 1754
DseDI GACNNNNNNGTC 1 cut(s) 1669
EaeI YGGCCR 1 cut(s) 441
Eam1104I CTCTTC 1 cut(s) 626
Eam1105I GACNNNNNGTC 1 cut(s) 1754
EarI CTCTTC 1 cut(s) 626
Ecl136II GAGCTC 1 cut(s) 7
Eco105I TACGTA 1 cut(s) 535
Eco130I CCWWGG 4 cut(s) 255, 495, 502, 1171
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 1556, 1762
Eco47I GGWCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 263
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 2 cut(s) 357, 1456
EcoRII CCWGG 4 cut(s) 277, 1150, 1284, 1541
EcoT14I CCWWGG 4 cut(s) 255, 495, 502, 1171
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 4 cut(s) 255, 495, 502, 1171
FaeI CATG 5 cut(s) 174, 379, 817, 1772, 1928
FaqI GGGAC 1 cut(s) 664
FatI CATG 5 cut(s) 170, 375, 813, 1768, 1924
FauI CCCGC 1 cut(s) 332
FauNDI CATATG 1 cut(s) 1744
FbaI TGATCA 2 cut(s) 1647, 1866
FblI GTMKAC 2 cut(s) 537, 1575
Fnu4HI GCNGC 7 cut(s) 220, 302, 524, 953, 1293, 1723, 1857
FokI GGATG 6 cut(s) 1099, 1242, 1285, 1676, 1799, 1863
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 7 cut(s) 220, 302, 524, 953, 1293, 1723, 1857
FspBI CTAG 6 cut(s) 737, 843, 890, 1031, 1314, 1472
FspI TGCGCA 1 cut(s) 1949
GlaI GCGC 4 cut(s) 223, 344, 1562, 1949
GluI GCNGC 7 cut(s) 220, 302, 524, 953, 1293, 1723, 1857
GsuI CTGGAG 1 cut(s) 31
HaeII RGCGCY 2 cut(s) 225, 1564
HaeIII GGCC 2 cut(s) 443, 1470
HapII CCGG 2 cut(s) 627, 1791
HhaI GCGC 4 cut(s) 224, 345, 1563, 1950
Hin1II CATG 5 cut(s) 174, 379, 817, 1772, 1928
Hin6I GCGC 4 cut(s) 222, 343, 1561, 1948
HinP1I GCGC 4 cut(s) 222, 343, 1561, 1948
HincII GTYRAC 1 cut(s) 912
HindII GTYRAC 1 cut(s) 912
HpaII CCGG 2 cut(s) 627, 1791
HphI GGTGA 8 cut(s) 230, 281, 616, 767, 1342, 1393, 1437, 1598
Hpy166II GTNNAC 5 cut(s) 400, 538, 912, 1016, 1576
Hpy188I TCNGA 9 cut(s) 327, 427, 613, 1138, 1279, 1420, 1556, 1617, 1786
Hpy8I GTNNAC 5 cut(s) 400, 538, 912, 1016, 1576
HpyAV CCTTC 9 cut(s) 602, 677, 1051, 1077, 1079, 1551, 1612, 1633, 1821
HpyCH4III ACNGT 4 cut(s) 366, 642, 949, 1142
HpyCH4IV ACGT 3 cut(s) 534, 689, 1668
HpyF10VI GCNNNNNNNGC 4 cut(s) 173, 225, 301, 1722
HpyF3I CTNAG 7 cut(s) 386, 391, 458, 646, 761, 1457, 1759
HpySE526I ACGT 3 cut(s) 534, 689, 1668
Hsp92II CATG 5 cut(s) 174, 379, 817, 1772, 1928
HspAI GCGC 4 cut(s) 222, 343, 1561, 1948
Ksp22I TGATCA 2 cut(s) 1647, 1866
Kzo9I GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
LmnI GCTCC 3 cut(s) 4, 571, 1289
Lsp1109I GCAGC 7 cut(s) 231, 313, 535, 939, 1279, 1709, 1868
LweI GCATC 7 cut(s) 185, 617, 1214, 1220, 1777, 1900, 1935
MaeI CTAG 6 cut(s) 737, 843, 890, 1031, 1314, 1472
MaeII ACGT 3 cut(s) 534, 689, 1668
MaeIII GTNAC 3 cut(s) 85, 550, 943
MalI GATC 6 cut(s) 273, 759, 1259, 1633, 1649, 1868
MboI GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
MboII GAAGA 9 cut(s) 23, 256, 613, 768, 782, 1200, 1492, 1788, 1791
MflI RGATCY 1 cut(s) 1631
MhlI GDGCHC 2 cut(s) 9, 727
MlsI TGGCCA 1 cut(s) 443
MluNI TGGCCA 1 cut(s) 443
MlyI GAGTC 2 cut(s) 646, 1424
MmeI TCCRAC 1 cut(s) 396
MnlI CCTC 8 cut(s) 360, 526, 1380, 1462, 1522, 1761, 1806, 1923
Mox20I TGGCCA 1 cut(s) 443
MroXI GAANNNNTTC 1 cut(s) 871
MscI TGGCCA 1 cut(s) 443
MseI TTAA 4 cut(s) 335, 584, 1221, 1902
MslI CAYNNNNRTG 2 cut(s) 1682, 1849
Msp20I TGGCCA 1 cut(s) 443
MspA1I CMGCKG 1 cut(s) 1859
MspI CCGG 2 cut(s) 627, 1791
MspR9I CCNGG 5 cut(s) 279, 1152, 1286, 1543, 1792
Mva1269I GAATGC 3 cut(s) 41, 345, 1725
MvaI CCWGG 4 cut(s) 279, 1152, 1286, 1543
MwoI GCNNNNNNNGC 4 cut(s) 173, 225, 301, 1722
NciI CCSGG 1 cut(s) 1792
NdeI CATATG 1 cut(s) 1744
NdeII GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
NlaIII CATG 5 cut(s) 174, 379, 817, 1772, 1928
NlaIV GGNNCC 2 cut(s) 1149, 1633
NsbI TGCGCA 1 cut(s) 1949
NspI RCATGY 2 cut(s) 379, 1928
NspV TTCGAA 1 cut(s) 1802
PciI ACATGT 1 cut(s) 1924
PcsI WCGNNNNNNNCGW 1 cut(s) 1665
PctI GAATGC 3 cut(s) 41, 345, 1725
PdmI GAANNNNTTC 1 cut(s) 871
PfeI GAWTC 8 cut(s) 136, 190, 316, 773, 900, 1274, 1391, 1440
PflMI CCANNNNNTGG 1 cut(s) 1055
PfoI TCCNGGA 1 cut(s) 1541
PkrI GCNGC 7 cut(s) 221, 303, 525, 954, 1294, 1724, 1858
PleI GAGTC 2 cut(s) 646, 1423
PpsI GAGTC 2 cut(s) 646, 1423
Ppu21I YACGTR 1 cut(s) 535
PscI ACATGT 1 cut(s) 1924
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 4 cut(s) 277, 1150, 1284, 1541
PspGI CCWGG 4 cut(s) 277, 1150, 1284, 1541
PspN4I GGNNCC 2 cut(s) 1149, 1633
PspPI GGNCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
PstNI CAGNNNCTG 1 cut(s) 225
PsuI RGATCY 1 cut(s) 1631
PvuII CAGCTG 1 cut(s) 1859
RsaI GTAC 5 cut(s) 214, 533, 1111, 1427, 1463
RsaNI GTAC 5 cut(s) 213, 532, 1110, 1426, 1462
RseI CAYNNNNRTG 2 cut(s) 1682, 1849
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 4 cut(s) 335, 584, 1221, 1902
SatI GCNGC 7 cut(s) 220, 302, 524, 953, 1293, 1723, 1857
Sau3AI GATC 6 cut(s) 271, 757, 1257, 1631, 1647, 1866
Sau96I GGNCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
SchI GAGTC 2 cut(s) 646, 1424
ScrFI CCNGG 5 cut(s) 279, 1152, 1286, 1543, 1792
SduI GDGCHC 2 cut(s) 9, 727
SfaNI GCATC 7 cut(s) 185, 617, 1214, 1220, 1777, 1900, 1935
SfuI TTCGAA 1 cut(s) 1802
SinI GGWCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
SmiMI CAYNNNNRTG 2 cut(s) 1682, 1849
SmlI CTYRAG 2 cut(s) 745, 982
SmoI CTYRAG 2 cut(s) 745, 982
SnaBI TACGTA 1 cut(s) 535
SsiI CCGC 2 cut(s) 339, 1328
SspMI CTAG 6 cut(s) 737, 843, 890, 1031, 1314, 1472
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 5 cut(s) 277, 1150, 1284, 1541, 1790
StyI CCWWGG 4 cut(s) 255, 495, 502, 1171
TaaI ACNGT 4 cut(s) 366, 642, 949, 1142
TaiI ACGT 3 cut(s) 537, 692, 1671
TaqI TCGA 4 cut(s) 835, 1260, 1659, 1802
TatI WGTACW 2 cut(s) 212, 1425
TfiI GAWTC 8 cut(s) 136, 190, 316, 773, 900, 1274, 1391, 1440
Tru1I TTAA 4 cut(s) 335, 584, 1221, 1902
Tru9I TTAA 4 cut(s) 335, 584, 1221, 1902
TscAI CASTG 6 cut(s) 119, 163, 550, 1101, 1147, 1887
TseI GCWGC 7 cut(s) 219, 301, 523, 952, 1292, 1722, 1856
TspDTI ATGAA 3 cut(s) 96, 1200, 1287
TspGWI ACGGA 2 cut(s) 1380, 1500
TspRI CASTG 6 cut(s) 119, 163, 550, 1101, 1147, 1887
Van91I CCANNNNNTGG 1 cut(s) 1055
VpaK11BI GGWCC 8 cut(s) 413, 485, 499, 557, 701, 1367, 1597, 1748
XagI CCTNNNNNAGG 2 cut(s) 357, 1456
XapI RAATTY 3 cut(s) 849, 1072, 1537
XbaI TCTAGA 2 cut(s) 842, 1313
XceI RCATGY 2 cut(s) 379, 1928
XmiI GTMKAC 2 cut(s) 537, 1575
XmnI GAANNNNTTC 1 cut(s) 871
XspI CTAG 6 cut(s) 737, 843, 890, 1031, 1314, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.