RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g31470 FvH4_2g31470 |
| malus_domestica | MD08G1066100.v1.1 MD15G1055100.v1.1 |
| prunus_persica | Prupe.1G408300_v2.0.a1 |
| pyrus_communis | pycom08g05480 pycom15g05200 |
| rosa_chinensis | RchiOBHm_Chr4g0385561 RchiOBHm_Chr6g0311331 |
| rosa_laevigata | RLG00000010416 |
| rosa_multiflora | Rmu_co8395139.1_g000001 Rmu_sc0001461.1_g000089 Rmu_sc0002151.1_g000001 Rmu_sc0036231.1_g000001 Rmu_ssc0000472.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00014830 Rroxscaffold_2G00123020 Rroxscaffold_5G00346480 Rroxscaffold_7G00157750 |
| rosa_rugosa | Rorug03G0277700 Rorug03G0277800 Rorug03G0337400 Rorug04G0226900 Rorug05G0459000.1 Rorug06G0387300 Rorug06G0387400 Rorug06G0387500 Rorug06G0387600.1 |
| rosa_samantha | Rh1BG126500 Rh6AG502200 Rh6BG397500 Rh6BG397600 Rh6BG512800 Rh6CG518500 Rh6CG518700 Rh6DG504800 |
| rosa_wichuraiana | Rw3G022150 Rw5G025820 Rw6G043740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 85 |
| AgsI | TTSAA | 1 cut(s) | 126 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 62 |
| AluBI | AGCT | 2 cut(s) | 35, 71 |
| AluI | AGCT | 2 cut(s) | 35, 71 |
| Alw26I | GTCTC | 1 cut(s) | 145 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 11 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| BccI | CCATC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 1 cut(s) | 145 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 62 |
| BmrI | ACTGGG | 1 cut(s) | 139 |
| BmuI | ACTGGG | 1 cut(s) | 139 |
| BpuEI | CTTGAG | 1 cut(s) | 67 |
| Bse1I | ACTGG | 1 cut(s) | 145 |
| BseMII | CTCAG | 1 cut(s) | 50 |
| BseNI | ACTGG | 1 cut(s) | 145 |
| BsmAI | GTCTC | 1 cut(s) | 145 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BsrI | ACTGG | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 1 cut(s) | 73 |
| BstDEI | CTNAG | 1 cut(s) | 36 |
| BstMAI | GTCTC | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 1 cut(s) | 73 |
| CaiI | CAGNNNCTG | 1 cut(s) | 11 |
| CviJI | RGCY | 4 cut(s) | 11, 35, 71, 81 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 35, 71, 81 |
| DdeI | CTNAG | 1 cut(s) | 36 |
| DriI | GACNNNNNGTC | 1 cut(s) | 62 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 62 |
| Eco57I | CTGAAG | 1 cut(s) | 85 |
| FaiI | YATR | 1 cut(s) | 60 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 68 |
| HpyAV | CCTTC | 1 cut(s) | 132 |
| HpyF3I | CTNAG | 1 cut(s) | 36 |
| LmnI | GCTCC | 1 cut(s) | 68 |
| LpnPI | CCDG | 1 cut(s) | 57 |
| MmeI | TCCRAC | 1 cut(s) | 46 |
| PstNI | CAGNNNCTG | 1 cut(s) | 11 |
| SetI | ASST | 4 cut(s) | 37, 66, 73, 116 |
| SgeI | CNNG | 6 cut(s) | 18, 24, 44, 84, 96, 138 |
| SmlI | CTYRAG | 1 cut(s) | 82 |
| SmoI | CTYRAG | 1 cut(s) | 82 |