Rh4BG431100

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
57377611 .. 57382656
5046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG431100.1

Sequence Viewer

Length: 2727 bp
ATGGAGGACTGCCATGACCAAAGTAGAAAAGAAGCAGAGCTAATTCCAGATGAGGAAAAAAAGAAAGAAGCAGAGTTAATTGAAAGATTGGTAAGAAGGGTTATGACTGAAATAAACAAAACTCCGATGGGTCTCACTCCACTGTGGGATCGCGATGAAATCATGAATGTTTTCAAGTATGATAAGGGAACACCATCTATACAAGGGATTGTCCTAGACTTTGAAATGAAAAGGATGGTGAGTGATATAGGAGGTGACAGAATTTCTTGGGACAACTTTCGGAGAAGCCCCAATTGTACCACTGCGTTGACATACCTAAAGGAAAGATACAAAGCACATCGTAAAAGCCAAGAAGAGAGAAAGGGAGAGGTTAACATTTCCTCTACAGCTTTTGGAGCAATGGTCAATCTTAGGCTGCTTCAAATGAATAATGTGAATTTAGAAGGGAACTCAAAGTTTCTTCCTGCTGGAGTCAAGTGGTTACAATGGAAAGGTTGTCCTTTGAGATCTCTCCCTTCTGATTTCTTGCCTCCGCAACTCGCTGTCCTTGATCTTTCAGACAGCAATATCACAAGTTTGTGGGGAGGGTGCAGTATCATGGTATGCTTCAATTGTCTGACCTGCAGTGGAGACGGAAACAAGGTGGCTGAGAAATTGATGTTCTTGAATCTAAGCAACTGCATTTACCTAACTGCTATTCCTGATTTATCTGGGAATCGGGCGCTACAACAGCTTAATCTTGAGCATTGCATTTCACTGATTAAGCTTCATGGCTCGATTGGGAACCTGAACACATTAGTCCACTTGAACCTTCGAGAGTGTTCAAAGCTTGTTGAACTTCCAAGTGATGTCTCCGGCCTGAAAAAGCTCGAGTACCTAATCCTATCTGGTTGCTCACAGTTCAAAAAACTGCCAAACATGGACAGCTTGGTGTCACTGAAAGAACTTCTCCTTGATGACACTGCTATACAGAGTCTTCCCCAATCTATCTTCCGGCTTACAAAACTCGAAAAGCTCATCTTAAACCGGTGCAGTGAATTAAAAGAGCTACCTGTGGAGATTGGAAAGCTGTCTTCTTCGAAAGAAATCTCGCTTAATGGATCTGGTTTGGAAAAACTACCTAATTCCATTGGCTCTTTGGCAAACCTTGAGAAATTAAGTTTGTTCTGGTGTAAATCACTGACCACTCTTCCCAATTCCATTGGGAAGCTCAATTTCTTAGTGGAAGTTAGTACTTATGGTACTCCACTCACAGAACTGCCTGTGACCATTGGATCGTTGTCAAGCTTGAAGGACTTATCAGTTGGGCACGGTCAATTTCTGAGCTCATTGCCTGATTCAGTTGGAAGACTGCGCTCTTTAGTTGTGCTAAAGATAGAGCAGACATCAATCACAGACCTCCCACAGGAGATTGGTGAATTGAAAACACTTGAGAAACTTGAGCTGAGGAAATGTGAATCTCTTAGATCATTACCAGAGTCAATTGGAAGCATGAGGGCACTAACTTCTATAATCATAACTGCAGCAAATATCACCGAGTTGCCTGAATCCATAGGGAGGCTGGAGAATCTTACCATATTACAGCTGAACACATGTAGACAGTTCCGCAAGCTTCCAGCATCAATAGAACACTTAAAATCCTTGCACCGATTGCAGATGGTGAAAACTGCAGTGACAGAACTACCTGAAACCTTCGGAATGCTTTCTAGTTTGATGGTTTTGAGCATGGGAAAGAAGCCTCAAAATGGGAGACATGCAGAAGAGAAGTTTATACTTCCAGCTTCCTTCTCAAATCTGTCCCTGCTGTACGAACTGGATGCCTGTGCTTGTAATATATCTGGTGAAATTGCTGATGATTTCGAGAAGTTGTCATCGCTAGAAACTTTGAATCTGGGCCATAATAGTTTCTGCCGCCTTCCAGCCAGCCTGAGTGGTCTGTCCACTCTCGGAAAACTTTCATTGCCTCACTGTAAGAAGCTCAAATCTTTGCCACCGCTACCCTCAAGTTTGAAAGAGGTGGATATTGCAAACTGTACTGCATTAGAAAGTATATCTGATATATCAAACCTAGAGAACTTGACAGATTTCAACCTTACAAGCTGTGAGAAAGTGATGGATATTCCCGGCCTTGAATGCTTGGATTCCTTGGTAAGGTTGTATATGAGTGGCTGCAATGCTTGCACATCAGCTGTTAAGAGAAGACTTGCGAAAAAGAGCTACCTGAGGAAAATACGCAATCTTAGCATGCCTGGAAGCAAGATACCCGACTGGTTTTCTCAAGAAATGGTTACATTCTCAAAACGAGAAAACCGCCCCCTCAAAAGTGTAATTCTCTGTGTTGTAGTCTCGCTCAACCATCAAACACCAGACGACACAAGAGAAGAATTTCCTGCCGTGGTAGATATTCAAGCACAGATCCTCATACTGGATTCTCCTACTTTCACTACAACATTGGTCTTATCGGGAGTACCAAATACAAATGAAGATCAATTTCACTTGTGCCGGTATCCAACTGATCATCCTTTGGTATCCCAATTGAAAGATGGTTATAAAATACACGTAATGAGGAGAGAGCCGCCACATAGGAAAGGGGTGGAGCTGAAGAAGTGGGGGCTTTATTTGATTTACGAAGGTGATGATGACTATGAAGGAGATGAAGAATCATTAAATGAAAGCCAGCAATCCCTTTCAGAACAACTGGCAAATTTCTTCAGCTCTTTTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

908

Amino Acids

101.39

Weight (kDa)

6.23

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 223 - 314 9.6e-06 Leucine-rich repeat region
LRR_14 PF23598 296 - 392 2.9e-10 Leucine-rich repeat region
LRR_14 PF23598 393 - 458 1.4e-07 Leucine-rich repeat region
LRR_14 PF23598 447 - 532 8e-13 Leucine-rich repeat region
LRR_13 PF23286 474 - 544 4.8e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 534 - 608 5.5e-08 Leucine-rich repeat region
LRR_14 PF23598 615 - 762 2.8e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2550
Acc36I ACCTGC 1 cut(s) 629
AccI GTMKAC 1 cut(s) 1597
AccII CGCG 1 cut(s) 153
AciI CCGC 6 cut(s) 533, 1606, 1912, 1994, 2311, 2576
AclWI GGATC 4 cut(s) 156, 1108, 1282, 2410
AcsI RAATTY 4 cut(s) 261, 436, 2384, 2704
AcuI CTGAAG 2 cut(s) 2621, 2695
AfaI GTAC 7 cut(s) 298, 875, 1234, 1243, 1808, 2035, 2469
AfiI CCNNNNNNNGG 5 cut(s) 1405, 1557, 1745, 2151, 2425
AflIII ACRYGT 2 cut(s) 1592, 2557
AgeI ACCGGT 1 cut(s) 1026
AjnI CCWGG 1 cut(s) 2248
Alw21I GWGCWC 1 cut(s) 1328
Alw26I GTCTC 5 cut(s) 137, 624, 856, 1744, 2350
AlwI GGATC 4 cut(s) 156, 1108, 1282, 2410
Ama87I CYCGRG 1 cut(s) 869
AoxI GGCC 3 cut(s) 856, 1894, 2125
ApeKI GCWGC 3 cut(s) 415, 1523, 2169
ApoI RAATTY 4 cut(s) 261, 436, 2384, 2704
AsiGI ACCGGT 1 cut(s) 1026
Asp700I GAANNNNTTC 4 cut(s) 170, 1702, 1954, 2385
AspLEI GCGC 2 cut(s) 724, 1356
AspS9I GGNCC 1 cut(s) 1894
AsuC2I CCSGG 1 cut(s) 2124
AsuHPI GGTGA 7 cut(s) 250, 266, 1427, 1525, 1672, 1853, 2645
AsuII TTCGAA 1 cut(s) 1079
AvaI CYCGRG 1 cut(s) 869
AxyI CCTNAGG 1 cut(s) 2222
BaeGI GKGCMC 2 cut(s) 1311, 1501
BanII GRGCYC 1 cut(s) 1328
BbsI GAAGAC 4 cut(s) 968, 1065, 1354, 2206
Bbv12I GWGCWC 1 cut(s) 1328
BbvCI CCTCAGC 1 cut(s) 1445
BbvI GCAGC 3 cut(s) 402, 1535, 2156
BccI CCATC 8 cut(s) 121, 202, 229, 1651, 1708, 2107, 2364, 2537
BceAI ACGGC 1 cut(s) 2378
BcgI CGANNNNNNTGC 2 cut(s) 1799, 1833
BciT130I CCWGG 1 cut(s) 2250
BciVI GTATCC 2 cut(s) 2517, 2539
BclI TGATCA 1 cut(s) 2515
BcnI CCSGG 1 cut(s) 2124
BcoDI GTCTC 5 cut(s) 137, 624, 856, 1744, 2350
BfaI CTAG 4 cut(s) 215, 1707, 1877, 2069
BfmI CTRYAG 4 cut(s) 384, 622, 1521, 1668
BfoI RGCGCY 1 cut(s) 725
BfuAI ACCTGC 1 cut(s) 629
BfuI GTATCC 2 cut(s) 2517, 2539
BglII AGATCT 1 cut(s) 506
BisI GCNGC 5 cut(s) 416, 1524, 1912, 2170, 2576
BlsI GCNGC 5 cut(s) 417, 1525, 1913, 2171, 2577
BmcAI AGTACT 1 cut(s) 1234
Bme1390I CCNGG 2 cut(s) 2124, 2250
BmeT110I CYCGRG 1 cut(s) 869
BmgT120I GGNCC 1 cut(s) 1894
BmiI GGNNCC 1 cut(s) 785
BmrFI CCNGG 2 cut(s) 2124, 2250
BmsI GCATC 2 cut(s) 1628, 1807
BpiI GAAGAC 4 cut(s) 968, 1065, 1354, 2206
BpmI CTGGAG 2 cut(s) 489, 1583
Bpu10I CCTNAGC 1 cut(s) 1445
Bpu14I TTCGAA 1 cut(s) 1079
BpuEI CTTGAG 6 cut(s) 761, 1169, 1451, 1460, 1987, 2262
BpuMI CCSGG 1 cut(s) 2124
BsaAI YACGTR 1 cut(s) 2560
BsaI GGTCTC 1 cut(s) 137
BsaJI CCNNGG 2 cut(s) 2145, 2394
BsaWI WCCGGW 1 cut(s) 1026
BsaXI ACNNNNNCTCC 2 cut(s) 387, 417
Bsc4I CCNNNNNNNGG 5 cut(s) 1405, 1557, 1745, 2151, 2425
Bse118I RCCGGY 2 cut(s) 1026, 2502
Bse1I ACTGG 4 cut(s) 1818, 2273, 2430, 2703
Bse21I CCTNAGG 1 cut(s) 2222
Bse3DI GCAATG 5 cut(s) 405, 745, 1328, 1958, 2179
BseBI CCWGG 1 cut(s) 2250
BseDI CCNNGG 2 cut(s) 2145, 2394
BseGI GGATG 3 cut(s) 240, 1822, 2518
BseLI CCNNNNNNNGG 5 cut(s) 1405, 1557, 1745, 2151, 2425
BseMI GCAATG 5 cut(s) 405, 745, 1328, 1958, 2179
BseMII CTCAG 5 cut(s) 639, 1313, 1436, 1919, 2213
BseNI ACTGG 4 cut(s) 1818, 2273, 2430, 2703
BseRI GAGGAG 1 cut(s) 2581
BseSI GKGCMC 2 cut(s) 1311, 1501
BseXI GCAGC 3 cut(s) 402, 1535, 2156
BsgI GTGCAG 2 cut(s) 610, 1051
Bsh1236I CGCG 1 cut(s) 153
BshFI GGCC 3 cut(s) 858, 1896, 2127
BshTI ACCGGT 1 cut(s) 1026
BsiHKAI GWGCWC 1 cut(s) 1328
BsiHKCI CYCGRG 1 cut(s) 869
BsiSI CCGG 5 cut(s) 855, 994, 1027, 2124, 2503
BslFI GGGAC 2 cut(s) 284, 1783
BslI CCNNNNNNNGG 5 cut(s) 1405, 1557, 1745, 2151, 2425
BsmAI GTCTC 5 cut(s) 137, 624, 856, 1744, 2350
BsmBI CGTCTC 1 cut(s) 624
BsmFI GGGAC 2 cut(s) 284, 1783
BsmI GAATGC 2 cut(s) 1704, 2138
BsnI GGCC 3 cut(s) 858, 1896, 2127
Bso31I GGTCTC 1 cut(s) 137
BsoBI CYCGRG 1 cut(s) 869
Bsp119I TTCGAA 1 cut(s) 1079
Bsp1286I GDGCHC 3 cut(s) 1311, 1328, 1501
Bsp143I GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
Bsp68I TCGCGA 1 cut(s) 153
BspACI CCGC 6 cut(s) 533, 1606, 1912, 1994, 2311, 2576
BspANI GGCC 3 cut(s) 858, 1896, 2127
BspCNI CTCAG 5 cut(s) 640, 1314, 1437, 1920, 2214
BspFNI CGCG 1 cut(s) 153
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 785
BspMAI CTGCAG 3 cut(s) 626, 1525, 1672
BspMI ACCTGC 1 cut(s) 629
BspPI GGATC 4 cut(s) 156, 1108, 1282, 2410
BspT104I TTCGAA 1 cut(s) 1079
BspTNI GGTCTC 1 cut(s) 137
BsrDI GCAATG 5 cut(s) 405, 745, 1328, 1958, 2179
BsrFI RCCGGY 2 cut(s) 1026, 2502
BsrI ACTGG 4 cut(s) 1818, 2273, 2430, 2703
BssAI RCCGGY 2 cut(s) 1026, 2502
BssECI CCNNGG 2 cut(s) 2145, 2394
BssMI GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
BssT1I CCWWGG 1 cut(s) 2145
Bst2UI CCWGG 1 cut(s) 2250
Bst4CI ACNGT 6 cut(s) 144, 900, 1313, 1602, 1970, 2033
Bst6I CTCTTC 3 cut(s) 348, 1194, 1755
BstAPI GCANNNNNTGC 2 cut(s) 1651, 2178
BstBAI YACGTR 1 cut(s) 2560
BstBI TTCGAA 1 cut(s) 1079
BstC8I GCNNGC 5 cut(s) 1610, 1924, 2179, 2246, 2678
BstDSI CCRYGG 1 cut(s) 2394
BstENI CCTNNNNNAGG 2 cut(s) 1403, 2149
BstF5I GGATG 3 cut(s) 240, 1822, 2518
BstFNI CGCG 1 cut(s) 153
BstH2I RGCGCY 1 cut(s) 725
BstHHI GCGC 2 cut(s) 724, 1356
BstKTI GATC 9 cut(s) 151, 509, 553, 1103, 1277, 1469, 2418, 2488, 2518
BstMAI GTCTC 5 cut(s) 137, 624, 856, 1744, 2350
BstMBI GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
BstMWI GCNNNNNNNGC 6 cut(s) 395, 730, 1651, 2133, 2178, 2241
BstNI CCWGG 1 cut(s) 2250
BstNSI RCATGY 3 cut(s) 1596, 1757, 2248
BstSCI CCNGG 2 cut(s) 2122, 2248
BstSFI CTRYAG 4 cut(s) 384, 622, 1521, 1668
BstSLI GKGCMC 2 cut(s) 1311, 1501
BstUI CGCG 1 cut(s) 153
BstV1I GCAGC 3 cut(s) 402, 1535, 2156
BstV2I GAAGAC 4 cut(s) 968, 1065, 1354, 2206
BstX2I RGATCY 3 cut(s) 506, 1100, 2415
BstYI RGATCY 3 cut(s) 506, 1100, 2415
Bsu36I CCTNAGG 1 cut(s) 2222
BsuI GTATCC 2 cut(s) 2517, 2539
BsuRI GGCC 3 cut(s) 858, 1896, 2127
BtgI CCRYGG 1 cut(s) 2394
BtgZI GCGATG 2 cut(s) 168, 1857
BtsCI GGATG 3 cut(s) 240, 1822, 2518
BtsI GCAGTG 5 cut(s) 300, 631, 960, 1039, 1677
BtuMI TCGCGA 1 cut(s) 153
BveI ACCTGC 1 cut(s) 629
Cac8I GCNNGC 5 cut(s) 1610, 1924, 2179, 2246, 2678
CciI TCATGA 1 cut(s) 162
CfoI GCGC 2 cut(s) 724, 1356
Cfr10I RCCGGY 2 cut(s) 1026, 2502
Cfr13I GGNCC 1 cut(s) 1894
Csp6I GTAC 7 cut(s) 297, 874, 1233, 1242, 1807, 2034, 2468
CspAI ACCGGT 1 cut(s) 1026
CviQI GTAC 7 cut(s) 297, 874, 1233, 1242, 1807, 2034, 2468
DpnI GATC 9 cut(s) 150, 508, 552, 1102, 1276, 1468, 2417, 2487, 2517
DpnII GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
Eam1104I CTCTTC 3 cut(s) 348, 1194, 1755
EarI CTCTTC 3 cut(s) 348, 1194, 1755
Ecl136II GAGCTC 1 cut(s) 1326
Eco130I CCWWGG 1 cut(s) 2145
Eco24I GRGCYC 1 cut(s) 1328
Eco31I GGTCTC 1 cut(s) 137
Eco53kI GAGCTC 1 cut(s) 1326
Eco57I CTGAAG 2 cut(s) 2621, 2695
Eco81I CCTNAGG 1 cut(s) 2222
Eco88I CYCGRG 1 cut(s) 869
EcoICRI GAGCTC 1 cut(s) 1326
EcoNI CCTNNNNNAGG 2 cut(s) 1403, 2149
EcoRII CCWGG 1 cut(s) 2248
EcoT14I CCWWGG 1 cut(s) 2145
EcoT38I GRGCYC 1 cut(s) 1328
ErhI CCWWGG 1 cut(s) 2145
Esp3I CGTCTC 1 cut(s) 624
FalI AAGNNNNNCTT 2 cut(s) 1004, 1036
FaqI GGGAC 2 cut(s) 284, 1783
FbaI TGATCA 1 cut(s) 2515
FblI GTMKAC 1 cut(s) 1597
Fnu4HI GCNGC 5 cut(s) 416, 1524, 1912, 2170, 2576
FokI GGATG 3 cut(s) 247, 1829, 2505
FriOI GRGCYC 1 cut(s) 1328
Fsp4HI GCNGC 5 cut(s) 416, 1524, 1912, 2170, 2576
FspBI CTAG 4 cut(s) 215, 1707, 1877, 2069
GlaI GCGC 2 cut(s) 723, 1355
GluI GCNGC 5 cut(s) 416, 1524, 1912, 2170, 2576
GsuI CTGGAG 2 cut(s) 489, 1583
HaeII RGCGCY 1 cut(s) 725
HaeIII GGCC 3 cut(s) 858, 1896, 2127
HapII CCGG 5 cut(s) 855, 994, 1027, 2124, 2503
HhaI GCGC 2 cut(s) 724, 1356
Hin6I GCGC 2 cut(s) 722, 1354
HinP1I GCGC 2 cut(s) 722, 1354
HincII GTYRAC 2 cut(s) 309, 373
HindII GTYRAC 2 cut(s) 309, 373
HindIII AAGCTT 4 cut(s) 764, 827, 1285, 1610
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 5 cut(s) 855, 994, 1027, 2124, 2503
HphI GGTGA 7 cut(s) 250, 266, 1427, 1525, 1672, 1853, 2645
Hpy166II GTNNAC 5 cut(s) 309, 373, 802, 1598, 1941
Hpy8I GTNNAC 5 cut(s) 309, 373, 802, 1598, 1941
HpyCH4III ACNGT 6 cut(s) 144, 900, 1313, 1602, 1970, 2033
HpyCH4IV ACGT 1 cut(s) 2559
HpyF10VI GCNNNNNNNGC 6 cut(s) 395, 730, 1651, 2133, 2178, 2241
HpySE526I ACGT 1 cut(s) 2559
HspAI GCGC 2 cut(s) 722, 1354
Ksp22I TGATCA 1 cut(s) 2515
KspAI GTTAAC 1 cut(s) 373
Kzo9I GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
LmnI GCTCC 2 cut(s) 395, 2596
Lsp1109I GCAGC 3 cut(s) 402, 1535, 2156
LweI GCATC 2 cut(s) 1628, 1807
MaeI CTAG 4 cut(s) 215, 1707, 1877, 2069
MaeII ACGT 1 cut(s) 2559
MaeIII GTNAC 6 cut(s) 254, 480, 933, 1264, 1672, 2287
MalI GATC 9 cut(s) 150, 508, 552, 1102, 1276, 1468, 2417, 2487, 2517
MboI GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
MfeI CAATTG 4 cut(s) 292, 610, 1482, 2534
MflI RGATCY 3 cut(s) 506, 1100, 2415
MhlI GDGCHC 3 cut(s) 1311, 1328, 1501
MlyI GAGTC 3 cut(s) 480, 982, 1487
MmeI TCCRAC 2 cut(s) 1324, 2534
MroXI GAANNNNTTC 4 cut(s) 170, 1702, 1954, 2385
MspA1I CMGCKG 2 cut(s) 1585, 2189
MspI CCGG 5 cut(s) 855, 994, 1027, 2124, 2503
MspR9I CCNGG 2 cut(s) 2124, 2250
MunI CAATTG 4 cut(s) 292, 610, 1482, 2534
Mva1269I GAATGC 2 cut(s) 1704, 2138
MvaI CCWGG 1 cut(s) 2250
MvnI CGCG 1 cut(s) 153
MwoI GCNNNNNNNGC 6 cut(s) 395, 730, 1651, 2133, 2178, 2241
NciI CCSGG 1 cut(s) 2124
NdeII GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
NlaIV GGNNCC 1 cut(s) 785
NmuCI GTSAC 4 cut(s) 254, 933, 1264, 1672
NruI TCGCGA 1 cut(s) 153
NspI RCATGY 3 cut(s) 1596, 1757, 2248
NspV TTCGAA 1 cut(s) 1079
PaeI GCATGC 1 cut(s) 2248
PaeR7I CTCGAG 1 cut(s) 869
PagI TCATGA 1 cut(s) 162
PciI ACATGT 1 cut(s) 1592
PctI GAATGC 2 cut(s) 1704, 2138
PdmI GAANNNNTTC 4 cut(s) 170, 1702, 1954, 2385
PinAI ACCGGT 1 cut(s) 1026
PkrI GCNGC 5 cut(s) 417, 1525, 1913, 2171, 2577
PleI GAGTC 3 cut(s) 479, 981, 1486
PpsI GAGTC 3 cut(s) 479, 981, 1486
Ppu21I YACGTR 1 cut(s) 2560
PscI ACATGT 1 cut(s) 1592
PsiI TTATAA 1 cut(s) 2550
Psp124BI GAGCTC 1 cut(s) 1328
Psp6I CCWGG 1 cut(s) 2248
PspGI CCWGG 1 cut(s) 2248
PspN4I GGNNCC 1 cut(s) 785
PspPI GGNCC 1 cut(s) 1894
PspXI VCTCGAGB 1 cut(s) 869
PstI CTGCAG 3 cut(s) 626, 1525, 1672
PsuI RGATCY 3 cut(s) 506, 1100, 2415
PvuII CAGCTG 2 cut(s) 1585, 2189
RruI TCGCGA 1 cut(s) 153
RsaI GTAC 7 cut(s) 298, 875, 1234, 1243, 1808, 2035, 2469
RsaNI GTAC 7 cut(s) 297, 874, 1233, 1242, 1807, 2034, 2468
SacI GAGCTC 1 cut(s) 1328
SatI GCNGC 5 cut(s) 416, 1524, 1912, 2170, 2576
Sau3AI GATC 9 cut(s) 148, 506, 550, 1100, 1274, 1466, 2415, 2485, 2515
Sau96I GGNCC 1 cut(s) 1894
ScaI AGTACT 1 cut(s) 1234
SchI GAGTC 3 cut(s) 480, 982, 1487
ScrFI CCNGG 2 cut(s) 2124, 2250
SduI GDGCHC 3 cut(s) 1311, 1328, 1501
SfaNI GCATC 2 cut(s) 1628, 1807
SfcI CTRYAG 4 cut(s) 384, 622, 1521, 1668
Sfr274I CTCGAG 1 cut(s) 869
SfuI TTCGAA 1 cut(s) 1079
SlaI CTCGAG 1 cut(s) 869
SmlI CTYRAG 7 cut(s) 740, 869, 1148, 1430, 1439, 2002, 2277
SmoI CTYRAG 7 cut(s) 740, 869, 1148, 1430, 1439, 2002, 2277
SphI GCATGC 1 cut(s) 2248
SsiI CCGC 6 cut(s) 533, 1606, 1912, 1994, 2311, 2576
SspMI CTAG 4 cut(s) 215, 1707, 1877, 2069
SstI GAGCTC 1 cut(s) 1328
StyD4I CCNGG 2 cut(s) 2122, 2248
StyI CCWWGG 1 cut(s) 2145
TaaI ACNGT 6 cut(s) 144, 900, 1313, 1602, 1970, 2033
TaiI ACGT 1 cut(s) 2562
TaqI TCGA 6 cut(s) 776, 814, 870, 1008, 1079, 1860
TatI WGTACW 2 cut(s) 1232, 2033
TauI GCSGC 2 cut(s) 1914, 2578
TseFI GTSAC 4 cut(s) 254, 933, 1264, 1672
TseI GCWGC 3 cut(s) 415, 1523, 2169
Tsp45I GTSAC 4 cut(s) 254, 933, 1264, 1672
TspGWI ACGGA 1 cut(s) 648
XagI CCTNNNNNAGG 2 cut(s) 1403, 2149
XapI RAATTY 4 cut(s) 261, 436, 2384, 2704
XceI RCATGY 3 cut(s) 1596, 1757, 2248
XcmI CCANNNNNNNNNTGG 3 cut(s) 1135, 1558, 2540
XhoI CTCGAG 1 cut(s) 869
XmiI GTMKAC 1 cut(s) 1597
XmnI GAANNNNTTC 4 cut(s) 170, 1702, 1954, 2385
XspI CTAG 4 cut(s) 215, 1707, 1877, 2069
ZrmI AGTACT 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.