Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 14 - 159 | 7.2e-30 | TIR domain |
| TIR_2 | PF13676 | 16 - 107 | 2e-16 | TIR domain |
| NB-ARC | PF00931 | 176 - 343 | 2.3e-20 | NB-ARC domain |
| NACHT | PF05729 | 191 - 338 | 8e-08 | NACHT domain |
| WHD_ROQ1 | PF23282 | 403 - 475 | 1.1e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 661 - 771 | 7.9e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 757 - 823 | 1.2e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 821 - 896 | 6e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 892 - 972 | 2.4e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 978 - 1124 | 1.7e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 981 - 1021 | 6.1e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 960, 3642 |
| AbsI | CCTCGAGG | 1 cut(s) | 257 |
| Acc16I | TGCGCA | 1 cut(s) | 1139 |
| AccB1I | GGYRCC | 2 cut(s) | 14, 252 |
| AccI | GTMKAC | 2 cut(s) | 1453, 1513 |
| AccII | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| AclI | AACGTT | 1 cut(s) | 3542 |
| AclWI | GGATC | 5 cut(s) | 292, 1430, 1443, 1578, 3502 |
| AcoI | YGGCCR | 4 cut(s) | 210, 381, 2404, 3753 |
| AcsI | RAATTY | 7 cut(s) | 1558, 1587, 1762, 1781, 2068, 2318, 2937 |
| AcuI | CTGAAG | 6 cut(s) | 307, 1154, 1202, 1730, 3650, 3674 |
| AcyI | GRCGYC | 1 cut(s) | 15 |
| AfaI | GTAC | 4 cut(s) | 126, 754, 2335, 3561 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 11, 246, 754, 2649, 2837, 3243, 3487, 3517, 3631 |
| AflII | CTTAAG | 1 cut(s) | 2024 |
| AflIII | ACRYGT | 1 cut(s) | 45 |
| AgeI | ACCGGT | 2 cut(s) | 1577, 2166 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3712 |
| AjiI | CACGTC | 2 cut(s) | 46, 535 |
| AjnI | CCWGG | 3 cut(s) | 993, 3159, 3340 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1991, 2023 |
| Alw21I | GWGCWC | 1 cut(s) | 267 |
| Alw26I | GTCTC | 8 cut(s) | 286, 364, 676, 694, 770, 1389, 2468, 2836 |
| AlwI | GGATC | 5 cut(s) | 292, 1430, 1443, 1578, 3502 |
| Ama87I | CYCGRG | 2 cut(s) | 244, 257 |
| AoxI | GGCC | 7 cut(s) | 148, 210, 286, 381, 1870, 2404, 3753 |
| ApeKI | GCWGC | 5 cut(s) | 420, 497, 1962, 2615, 3261 |
| ApoI | RAATTY | 7 cut(s) | 1558, 1587, 1762, 1781, 2068, 2318, 2937 |
| AsiGI | ACCGGT | 2 cut(s) | 1577, 2166 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1785, 2794 |
| AspLEI | GCGC | 4 cut(s) | 17, 109, 175, 1140 |
| AspS9I | GGNCC | 2 cut(s) | 698, 1534 |
| AsuC2I | CCSGG | 4 cut(s) | 485, 750, 1440, 3216 |
| AsuHPI | GGTGA | 7 cut(s) | 79, 1322, 1592, 2617, 2945, 3698, 3811 |
| AvaI | CYCGRG | 2 cut(s) | 244, 257 |
| AvaII | GGWCC | 2 cut(s) | 698, 1534 |
| AxyI | CCTNAGG | 3 cut(s) | 702, 2193, 3314 |
| BalI | TGGCCA | 2 cut(s) | 383, 3755 |
| BamHI | GGATCC | 1 cut(s) | 1435 |
| BanI | GGYRCC | 2 cut(s) | 14, 252 |
| BanII | GRGCYC | 1 cut(s) | 267 |
| BauI | CACGAG | 2 cut(s) | 921, 2913 |
| BbsI | GAAGAC | 8 cut(s) | 75, 124, 173, 537, 1368, 1411, 2483, 3711 |
| Bbv12I | GWGCWC | 1 cut(s) | 267 |
| BbvCI | CCTCAGC | 1 cut(s) | 2537 |
| BbvI | GCAGC | 5 cut(s) | 432, 509, 1949, 2627, 3248 |
| BccI | CCATC | 7 cut(s) | 92, 1301, 2142, 2743, 2800, 3456, 3629 |
| BceAI | ACGGC | 7 cut(s) | 2, 28, 163, 197, 2338, 2419, 3867 |
| BciT130I | CCWGG | 3 cut(s) | 995, 3161, 3342 |
| BciVI | GTATCC | 1 cut(s) | 3609 |
| BclI | TGATCA | 2 cut(s) | 1384, 2043 |
| BcnI | CCSGG | 4 cut(s) | 485, 750, 1440, 3216 |
| BcoDI | GTCTC | 8 cut(s) | 286, 364, 676, 694, 770, 1389, 2468, 2836 |
| BfaI | CTAG | 9 cut(s) | 449, 1202, 1229, 1529, 1538, 2799, 3296, 3831, 3905 |
| BfmI | CTRYAG | 4 cut(s) | 1629, 1963, 2613, 2760 |
| BfoI | RGCGCY | 1 cut(s) | 18 |
| BfrI | CTTAAG | 1 cut(s) | 2024 |
| BfuI | GTATCC | 1 cut(s) | 3609 |
| BglII | AGATCT | 2 cut(s) | 273, 326 |
| BlpI | GCTNAGC | 1 cut(s) | 2156 |
| Bme1390I | CCNGG | 7 cut(s) | 485, 750, 995, 1440, 3161, 3216, 3342 |
| Bme18I | GGWCC | 2 cut(s) | 698, 1534 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3712 |
| BmeT110I | CYCGRG | 2 cut(s) | 244, 257 |
| BmgBI | CACGTC | 2 cut(s) | 46, 535 |
| BmgT120I | GGNCC | 2 cut(s) | 698, 1534 |
| BmiI | GGNNCC | 3 cut(s) | 16, 254, 1437 |
| BmrFI | CCNGG | 7 cut(s) | 485, 750, 995, 1440, 3161, 3216, 3342 |
| BmrI | ACTGGG | 1 cut(s) | 936 |
| BmsI | GCATC | 7 cut(s) | 1120, 1186, 1264, 1368, 2720, 2746, 2899 |
| BmuI | ACTGGG | 1 cut(s) | 936 |
| BpiI | GAAGAC | 8 cut(s) | 75, 124, 173, 537, 1368, 1411, 2483, 3711 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3462, 3494 |
| BpmI | CTGGAG | 1 cut(s) | 3182 |
| Bpu10I | CCTNAGC | 2 cut(s) | 53, 2537 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2156 |
| BpuEI | CTTGAG | 7 cut(s) | 794, 1075, 2543, 2552, 3056, 3079, 3354 |
| BpuMI | CCSGG | 4 cut(s) | 485, 750, 1440, 3216 |
| Bsa29I | ATCGAT | 1 cut(s) | 2740 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3180 |
| BsaHI | GRCGYC | 1 cut(s) | 15 |
| BsaI | GGTCTC | 1 cut(s) | 364 |
| BsaJI | CCNNGG | 9 cut(s) | 18, 157, 378, 621, 748, 993, 1565, 2007, 2293 |
| BsaWI | WCCGGW | 3 cut(s) | 1577, 2166, 3457 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1285, 1315, 1713, 1743, 3779, 3809 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 11, 246, 754, 2649, 2837, 3243, 3487, 3517, 3631 |
| Bse118I | RCCGGY | 4 cut(s) | 304, 1577, 2166, 3594 |
| Bse1I | ACTGG | 6 cut(s) | 784, 942, 2910, 3365, 3522, 3756 |
| Bse21I | CCTNAGG | 3 cut(s) | 702, 2193, 3314 |
| Bse3DI | GCAATG | 3 cut(s) | 732, 1233, 3050 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3180 |
| BseBI | CCWGG | 3 cut(s) | 995, 3161, 3342 |
| BseCI | ATCGAT | 1 cut(s) | 2740 |
| BseDI | CCNNGG | 9 cut(s) | 18, 157, 378, 621, 748, 993, 1565, 2007, 2293 |
| BseGI | GGATG | 9 cut(s) | 841, 991, 1180, 1383, 2914, 3118, 3466, 3610, 3640 |
| BseJI | GATNNNNATC | 1 cut(s) | 3180 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 11, 246, 754, 2649, 2837, 3243, 3487, 3517, 3631 |
| BseMI | GCAATG | 3 cut(s) | 732, 1233, 3050 |
| BseMII | CTCAG | 9 cut(s) | 1016, 1923, 2170, 2184, 2528, 2998, 3011, 3305, 3402 |
| BseNI | ACTGG | 6 cut(s) | 784, 942, 2910, 3365, 3522, 3756 |
| BseRI | GAGGAG | 6 cut(s) | 78, 275, 1123, 1306, 2210, 3331 |
| BseX3I | CGGCCG | 1 cut(s) | 210 |
| BseXI | GCAGC | 5 cut(s) | 432, 509, 1949, 2627, 3248 |
| BseYI | CCCAGC | 1 cut(s) | 3481 |
| BsgI | GTGCAG | 1 cut(s) | 2191 |
| Bsh1236I | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| Bsh1285I | CGRYCG | 3 cut(s) | 195, 213, 1160 |
| BshFI | GGCC | 7 cut(s) | 150, 212, 288, 383, 1872, 2406, 3755 |
| BshNI | GGYRCC | 2 cut(s) | 14, 252 |
| BshTI | ACCGGT | 2 cut(s) | 1577, 2166 |
| BshVI | ATCGAT | 1 cut(s) | 2740 |
| BsiEI | CGRYCG | 3 cut(s) | 195, 213, 1160 |
| BsiHKAI | GWGCWC | 1 cut(s) | 267 |
| BsiHKCI | CYCGRG | 2 cut(s) | 244, 257 |
| BsiWI | CGTACG | 1 cut(s) | 124 |
| BslFI | GGGAC | 7 cut(s) | 56, 672, 976, 1516, 2412, 2875, 3721 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 11, 246, 754, 2649, 2837, 3243, 3487, 3517, 3631 |
| BsmAI | GTCTC | 8 cut(s) | 286, 364, 676, 694, 770, 1389, 2468, 2836 |
| BsmBI | CGTCTC | 1 cut(s) | 676 |
| BsmFI | GGGAC | 7 cut(s) | 56, 672, 976, 1516, 2412, 2875, 3721 |
| BsmI | GAATGC | 3 cut(s) | 2796, 3230, 3336 |
| BsnI | GGCC | 7 cut(s) | 150, 212, 288, 383, 1872, 2406, 3755 |
| Bso31I | GGTCTC | 1 cut(s) | 364 |
| BsoBI | CYCGRG | 2 cut(s) | 244, 257 |
| Bsp1286I | GDGCHC | 1 cut(s) | 267 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2156 |
| Bsp19I | CCATGG | 1 cut(s) | 378 |
| Bsp68I | TCGCGA | 1 cut(s) | 269 |
| BspANI | GGCC | 7 cut(s) | 150, 212, 288, 383, 1872, 2406, 3755 |
| BspCNI | CTCAG | 9 cut(s) | 1017, 1924, 2169, 2185, 2529, 2997, 3012, 3306, 3401 |
| BspDI | ATCGAT | 1 cut(s) | 2740 |
| BspFNI | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| BspHI | TCATGA | 3 cut(s) | 331, 1476, 3802 |
| BspLI | GGNNCC | 3 cut(s) | 16, 254, 1437 |
| BspMAI | CTGCAG | 4 cut(s) | 1633, 1967, 2617, 2764 |
| BspPI | GGATC | 5 cut(s) | 292, 1430, 1443, 1578, 3502 |
| BspQI | GCTCTTC | 1 cut(s) | 330 |
| BspT107I | GGYRCC | 2 cut(s) | 14, 252 |
| BspTI | CTTAAG | 1 cut(s) | 2024 |
| BspTNI | GGTCTC | 1 cut(s) | 364 |
| BsrDI | GCAATG | 3 cut(s) | 732, 1233, 3050 |
| BsrFI | RCCGGY | 4 cut(s) | 304, 1577, 2166, 3594 |
| BsrI | ACTGG | 6 cut(s) | 784, 942, 2910, 3365, 3522, 3756 |
| BssAI | RCCGGY | 4 cut(s) | 304, 1577, 2166, 3594 |
| BssECI | CCNNGG | 9 cut(s) | 18, 157, 378, 621, 748, 993, 1565, 2007, 2293 |
| BssNAI | GTATAC | 1 cut(s) | 1514 |
| BssNI | GRCGYC | 1 cut(s) | 15 |
| BssSI | CACGAG | 2 cut(s) | 921, 2913 |
| BssT1I | CCWWGG | 4 cut(s) | 378, 621, 1565, 2007 |
| Bst1107I | GTATAC | 1 cut(s) | 1514 |
| Bst2BI | CACGAG | 2 cut(s) | 921, 2913 |
| Bst2UI | CCWGG | 3 cut(s) | 995, 3161, 3342 |
| Bst6I | CTCTTC | 8 cut(s) | 330, 723, 1024, 1842, 2121, 2847, 3705, 3796 |
| BstACI | GRCGYC | 1 cut(s) | 15 |
| BstAFI | CTTAAG | 1 cut(s) | 2024 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2743, 3225, 3270 |
| BstC8I | GCNNGC | 7 cut(s) | 267, 1240, 1445, 1870, 2702, 3016, 3731 |
| BstDSI | CCRYGG | 3 cut(s) | 18, 157, 378 |
| BstEII | GGTNACC | 1 cut(s) | 2297 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3241 |
| BstF5I | GGATG | 9 cut(s) | 841, 991, 1180, 1383, 2914, 3118, 3466, 3610, 3640 |
| BstFNI | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| BstH2I | RGCGCY | 1 cut(s) | 18 |
| BstHHI | GCGC | 4 cut(s) | 17, 109, 175, 1140 |
| BstMAI | GTCTC | 8 cut(s) | 286, 364, 676, 694, 770, 1389, 2468, 2836 |
| BstMCI | CGRYCG | 3 cut(s) | 195, 213, 1160 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 21, 156, 285, 797, 2743, 3225, 3270 |
| BstNI | CCWGG | 3 cut(s) | 995, 3161, 3342 |
| BstNSI | RCATGY | 2 cut(s) | 1242, 1447 |
| BstPI | GGTNACC | 1 cut(s) | 2297 |
| BstSCI | CCNGG | 7 cut(s) | 483, 748, 993, 1438, 3159, 3214, 3340 |
| BstSFI | CTRYAG | 4 cut(s) | 1629, 1963, 2613, 2760 |
| BstUI | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| BstV1I | GCAGC | 5 cut(s) | 432, 509, 1949, 2627, 3248 |
| BstV2I | GAAGAC | 8 cut(s) | 75, 124, 173, 537, 1368, 1411, 2483, 3711 |
| BstX2I | RGATCY | 5 cut(s) | 273, 326, 1435, 1570, 3507 |
| BstYI | RGATCY | 5 cut(s) | 273, 326, 1435, 1570, 3507 |
| BstZ17I | GTATAC | 1 cut(s) | 1514 |
| BstZI | CGGCCG | 1 cut(s) | 210 |
| Bsu15I | ATCGAT | 1 cut(s) | 2740 |
| Bsu36I | CCTNAGG | 3 cut(s) | 702, 2193, 3314 |
| BsuI | GTATCC | 1 cut(s) | 3609 |
| BsuRI | GGCC | 7 cut(s) | 150, 212, 288, 383, 1872, 2406, 3755 |
| BsuTUI | ATCGAT | 1 cut(s) | 2740 |
| BtgI | CCRYGG | 3 cut(s) | 18, 157, 378 |
| BtgZI | GCGATG | 1 cut(s) | 154 |
| BtrI | CACGTC | 2 cut(s) | 46, 535 |
| BtsCI | GGATG | 9 cut(s) | 841, 991, 1180, 1383, 2914, 3118, 3466, 3610, 3640 |
| BtsI | GCAGTG | 2 cut(s) | 1223, 2769 |
| BtsIMutI | CAGTG | 7 cut(s) | 513, 1223, 1370, 1542, 2270, 2769, 3058 |
| BtuMI | TCGCGA | 1 cut(s) | 269 |
| Cac8I | GCNNGC | 7 cut(s) | 267, 1240, 1445, 1870, 2702, 3016, 3731 |
| CciI | TCATGA | 3 cut(s) | 331, 1476, 3802 |
| CfoI | GCGC | 4 cut(s) | 17, 109, 175, 1140 |
| Cfr10I | RCCGGY | 4 cut(s) | 304, 1577, 2166, 3594 |
| Cfr13I | GGNCC | 2 cut(s) | 698, 1534 |
| Cfr42I | CCGCGG | 1 cut(s) | 160 |
| ClaI | ATCGAT | 1 cut(s) | 2740 |
| CseI | GACGC | 3 cut(s) | 126, 1426, 2023 |
| Csp6I | GTAC | 4 cut(s) | 125, 753, 2334, 3560 |
| CspAI | ACCGGT | 2 cut(s) | 1577, 2166 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 373, 408 |
| CviQI | GTAC | 4 cut(s) | 125, 753, 2334, 3560 |
| DinI | GGCGCC | 1 cut(s) | 16 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3712 |
| EaeI | YGGCCR | 4 cut(s) | 210, 381, 2404, 3753 |
| EagI | CGGCCG | 1 cut(s) | 210 |
| Eam1104I | CTCTTC | 8 cut(s) | 330, 723, 1024, 1842, 2121, 2847, 3705, 3796 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3712 |
| EarI | CTCTTC | 8 cut(s) | 330, 723, 1024, 1842, 2121, 2847, 3705, 3796 |
| Ecl136II | GAGCTC | 1 cut(s) | 265 |
| EclXI | CGGCCG | 1 cut(s) | 210 |
| Eco130I | CCWWGG | 4 cut(s) | 378, 621, 1565, 2007 |
| Eco24I | GRGCYC | 1 cut(s) | 267 |
| Eco31I | GGTCTC | 1 cut(s) | 364 |
| Eco47I | GGWCC | 2 cut(s) | 698, 1534 |
| Eco52I | CGGCCG | 1 cut(s) | 210 |
| Eco53kI | GAGCTC | 1 cut(s) | 265 |
| Eco57I | CTGAAG | 6 cut(s) | 307, 1154, 1202, 1730, 3650, 3674 |
| Eco81I | CCTNAGG | 3 cut(s) | 702, 2193, 3314 |
| Eco88I | CYCGRG | 2 cut(s) | 244, 257 |
| Eco91I | GGTNACC | 1 cut(s) | 2297 |
| EcoICRI | GAGCTC | 1 cut(s) | 265 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3241 |
| EcoO109I | RGGNCCY | 1 cut(s) | 698 |
| EcoO65I | GGTNACC | 1 cut(s) | 2297 |
| EcoRII | CCWGG | 3 cut(s) | 993, 3159, 3340 |
| EcoT14I | CCWWGG | 4 cut(s) | 378, 621, 1565, 2007 |
| EcoT22I | ATGCAT | 1 cut(s) | 1383 |
| EcoT38I | GRGCYC | 1 cut(s) | 267 |
| EgeI | GGCGCC | 1 cut(s) | 16 |
| EheI | GGCGCC | 1 cut(s) | 16 |
| ErhI | CCWWGG | 4 cut(s) | 378, 621, 1565, 2007 |
| Esp3I | CGTCTC | 1 cut(s) | 676 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1650, 1682, 2144, 2176 |
| FaqI | GGGAC | 7 cut(s) | 56, 672, 976, 1516, 2412, 2875, 3721 |
| FauI | CCCGC | 1 cut(s) | 83 |
| FauNDI | CATATG | 1 cut(s) | 1639 |
| FbaI | TGATCA | 2 cut(s) | 1384, 2043 |
| FblI | GTMKAC | 2 cut(s) | 1453, 1513 |
| FokI | GGATG | 9 cut(s) | 848, 998, 1187, 1390, 2921, 3125, 3473, 3597, 3647 |
| FriOI | GRGCYC | 1 cut(s) | 267 |
| FspBI | CTAG | 9 cut(s) | 449, 1202, 1229, 1529, 1538, 2799, 3296, 3831, 3905 |
| FspI | TGCGCA | 1 cut(s) | 1139 |
| GlaI | GCGC | 4 cut(s) | 16, 108, 174, 1139 |
| GsaI | CCCAGC | 1 cut(s) | 3485 |
| GsuI | CTGGAG | 1 cut(s) | 3182 |
| HaeII | RGCGCY | 1 cut(s) | 18 |
| HaeIII | GGCC | 7 cut(s) | 150, 212, 288, 383, 1872, 2406, 3755 |
| HgaI | GACGC | 3 cut(s) | 126, 1426, 2023 |
| HhaI | GCGC | 4 cut(s) | 17, 109, 175, 1140 |
| Hin1I | GRCGYC | 1 cut(s) | 15 |
| Hin6I | GCGC | 4 cut(s) | 15, 107, 173, 1138 |
| HinP1I | GCGC | 4 cut(s) | 15, 107, 173, 1138 |
| HincII | GTYRAC | 2 cut(s) | 415, 874 |
| HindII | GTYRAC | 2 cut(s) | 415, 874 |
| HindIII | AAGCTT | 4 cut(s) | 55, 2015, 2702, 2782 |
| HphI | GGTGA | 7 cut(s) | 79, 1322, 1592, 2617, 2945, 3698, 3811 |
| Hpy166II | GTNNAC | 8 cut(s) | 415, 853, 874, 1454, 1514, 2086, 2690, 3033 |
| Hpy8I | GTNNAC | 8 cut(s) | 415, 853, 874, 1454, 1514, 2086, 2690, 3033 |
| HpyCH4IV | ACGT | 4 cut(s) | 45, 534, 567, 3542 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 21, 156, 285, 797, 2743, 3225, 3270 |
| HpySE526I | ACGT | 4 cut(s) | 45, 534, 567, 3542 |
| Hsp92I | GRCGYC | 1 cut(s) | 15 |
| HspAI | GCGC | 4 cut(s) | 15, 107, 173, 1138 |
| KasI | GGCGCC | 1 cut(s) | 14 |
| Ksp22I | TGATCA | 2 cut(s) | 1384, 2043 |
| KspI | CCGCGG | 1 cut(s) | 160 |
| LguI | GCTCTTC | 1 cut(s) | 330 |
| LmnI | GCTCC | 3 cut(s) | 262, 1721, 2055 |
| Lsp1109I | GCAGC | 5 cut(s) | 432, 509, 1949, 2627, 3248 |
| LweI | GCATC | 7 cut(s) | 1120, 1186, 1264, 1368, 2720, 2746, 2899 |
| MaeI | CTAG | 9 cut(s) | 449, 1202, 1229, 1529, 1538, 2799, 3296, 3831, 3905 |
| MaeII | ACGT | 4 cut(s) | 45, 534, 567, 3542 |
| MfeI | CAATTG | 3 cut(s) | 1278, 1320, 2340 |
| MflI | RGATCY | 5 cut(s) | 273, 326, 1435, 1570, 3507 |
| MhlI | GDGCHC | 1 cut(s) | 267 |
| MlsI | TGGCCA | 2 cut(s) | 383, 3755 |
| MluNI | TGGCCA | 2 cut(s) | 383, 3755 |
| Mly113I | GGCGCC | 1 cut(s) | 15 |
| MlyI | GAGTC | 9 cut(s) | 138, 187, 194, 236, 2276, 2579, 3322, 3722, 3782 |
| MmeI | TCCRAC | 4 cut(s) | 33, 963, 2017, 3649 |
| Mox20I | TGGCCA | 2 cut(s) | 383, 3755 |
| Mph1103I | ATGCAT | 1 cut(s) | 1383 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1785, 2794 |
| MscI | TGGCCA | 2 cut(s) | 383, 3755 |
| Msp20I | TGGCCA | 2 cut(s) | 383, 3755 |
| MspA1I | CMGCKG | 3 cut(s) | 159, 3281, 3485 |
| MspCI | CTTAAG | 1 cut(s) | 2024 |
| MspR9I | CCNGG | 7 cut(s) | 485, 750, 995, 1440, 3161, 3216, 3342 |
| MunI | CAATTG | 3 cut(s) | 1278, 1320, 2340 |
| Mva1269I | GAATGC | 3 cut(s) | 2796, 3230, 3336 |
| MvaI | CCWGG | 3 cut(s) | 995, 3161, 3342 |
| MvnI | CGCG | 6 cut(s) | 107, 120, 138, 159, 173, 269 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 21, 156, 285, 797, 2743, 3225, 3270 |
| NarI | GGCGCC | 1 cut(s) | 15 |
| NciI | CCSGG | 4 cut(s) | 485, 750, 1440, 3216 |
| NcoI | CCATGG | 1 cut(s) | 378 |
| NdeI | CATATG | 1 cut(s) | 1639 |
| NlaIV | GGNNCC | 3 cut(s) | 16, 254, 1437 |
| NmeAIII | GCCGAG | 4 cut(s) | 182, 201, 255, 671 |
| NmuCI | GTSAC | 7 cut(s) | 563, 1414, 1580, 2268, 2589, 2764, 3875 |
| NruI | TCGCGA | 1 cut(s) | 269 |
| NsbI | TGCGCA | 1 cut(s) | 1139 |
| NsiI | ATGCAT | 1 cut(s) | 1383 |
| NspI | RCATGY | 2 cut(s) | 1242, 1447 |
| PaeI | GCATGC | 2 cut(s) | 1242, 1447 |
| PaeR7I | CTCGAG | 2 cut(s) | 244, 257 |
| PagI | TCATGA | 3 cut(s) | 331, 1476, 3802 |
| PciSI | GCTCTTC | 1 cut(s) | 330 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 124, 1419, 3705 |
| PctI | GAATGC | 3 cut(s) | 2796, 3230, 3336 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1785, 2794 |
| Pfl23II | CGTACG | 1 cut(s) | 124 |
| PflFI | GACNNNGTC | 1 cut(s) | 356 |
| PfoI | TCCNGGA | 1 cut(s) | 3340 |
| PinAI | ACCGGT | 2 cut(s) | 1577, 2166 |
| Ple19I | CGATCG | 1 cut(s) | 195 |
| PleI | GAGTC | 9 cut(s) | 137, 186, 194, 236, 2275, 2578, 3322, 3721, 3782 |
| PluTI | GGCGCC | 1 cut(s) | 18 |
| PpsI | GAGTC | 9 cut(s) | 137, 186, 194, 236, 2275, 2578, 3322, 3721, 3782 |
| PpuMI | RGGWCCY | 1 cut(s) | 698 |
| PsiI | TTATAA | 2 cut(s) | 960, 3642 |
| Psp124BI | GAGCTC | 1 cut(s) | 267 |
| Psp1406I | AACGTT | 1 cut(s) | 3542 |
| Psp5II | RGGWCCY | 1 cut(s) | 698 |
| Psp6I | CCWGG | 3 cut(s) | 993, 3159, 3340 |
| PspEI | GGTNACC | 1 cut(s) | 2297 |
| PspFI | CCCAGC | 1 cut(s) | 3481 |
| PspGI | CCWGG | 3 cut(s) | 993, 3159, 3340 |
| PspLI | CGTACG | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 3 cut(s) | 16, 254, 1437 |
| PspPI | GGNCC | 2 cut(s) | 698, 1534 |
| PspPPI | RGGWCCY | 1 cut(s) | 698 |
| PspXI | VCTCGAGB | 2 cut(s) | 244, 257 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2197, 2229 |
| PstI | CTGCAG | 4 cut(s) | 1633, 1967, 2617, 2764 |
| PsuI | RGATCY | 5 cut(s) | 273, 326, 1435, 1570, 3507 |
| PsyI | GACNNNGTC | 1 cut(s) | 356 |
| PvuI | CGATCG | 1 cut(s) | 195 |
| PvuII | CAGCTG | 2 cut(s) | 3281, 3485 |
| RruI | TCGCGA | 1 cut(s) | 269 |
| RsaI | GTAC | 4 cut(s) | 126, 754, 2335, 3561 |
| RsaNI | GTAC | 4 cut(s) | 125, 753, 2334, 3560 |
| SacI | GAGCTC | 1 cut(s) | 267 |
| SacII | CCGCGG | 1 cut(s) | 160 |
| SapI | GCTCTTC | 1 cut(s) | 330 |
| Sau96I | GGNCC | 2 cut(s) | 698, 1534 |
| SchI | GAGTC | 9 cut(s) | 138, 187, 194, 236, 2276, 2579, 3322, 3722, 3782 |
| ScrFI | CCNGG | 7 cut(s) | 485, 750, 995, 1440, 3161, 3216, 3342 |
| SduI | GDGCHC | 1 cut(s) | 267 |
| SfaNI | GCATC | 7 cut(s) | 1120, 1186, 1264, 1368, 2720, 2746, 2899 |
| SfcI | CTRYAG | 4 cut(s) | 1629, 1963, 2613, 2760 |
| SfoI | GGCGCC | 1 cut(s) | 16 |
| Sfr274I | CTCGAG | 2 cut(s) | 244, 257 |
| Sfr303I | CCGCGG | 1 cut(s) | 160 |
| SgrBI | CCGCGG | 1 cut(s) | 160 |
| SinI | GGWCC | 2 cut(s) | 698, 1534 |
| SlaI | CTCGAG | 2 cut(s) | 244, 257 |
| SphI | GCATGC | 2 cut(s) | 1242, 1447 |
| SspDI | GGCGCC | 1 cut(s) | 14 |
| SspMI | CTAG | 9 cut(s) | 449, 1202, 1229, 1529, 1538, 2799, 3296, 3831, 3905 |
| SstI | GAGCTC | 1 cut(s) | 267 |
| StyD4I | CCNGG | 7 cut(s) | 483, 748, 993, 1438, 3159, 3214, 3340 |
| StyI | CCWWGG | 4 cut(s) | 378, 621, 1565, 2007 |
| TaiI | ACGT | 4 cut(s) | 48, 537, 570, 3545 |
| TaqI | TCGA | 9 cut(s) | 111, 195, 245, 258, 571, 1156, 2060, 2740, 2952 |
| TauI | GCSGC | 6 cut(s) | 123, 162, 209, 212, 1962, 3006 |
| TscAI | CASTG | 7 cut(s) | 513, 1223, 1377, 1549, 2277, 2769, 3065 |
| TseFI | GTSAC | 7 cut(s) | 563, 1414, 1580, 2268, 2589, 2764, 3875 |
| TseI | GCWGC | 5 cut(s) | 420, 497, 1962, 2615, 3261 |
| Tsp45I | GTSAC | 7 cut(s) | 563, 1414, 1580, 2268, 2589, 2764, 3875 |
| TspGWI | ACGGA | 4 cut(s) | 297, 2330, 3340, 3409 |
| TspRI | CASTG | 7 cut(s) | 513, 1223, 1377, 1549, 2277, 2769, 3065 |
| Tth111I | GACNNNGTC | 1 cut(s) | 356 |
| Vha464I | CTTAAG | 1 cut(s) | 2024 |
| VpaK11BI | GGWCC | 2 cut(s) | 698, 1534 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3241 |
| XapI | RAATTY | 7 cut(s) | 1558, 1587, 1762, 1781, 2068, 2318, 2937 |
| XceI | RCATGY | 2 cut(s) | 1242, 1447 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2060, 2650, 3632 |
| XhoI | CTCGAG | 2 cut(s) | 244, 257 |
| XmiI | GTMKAC | 2 cut(s) | 1453, 1513 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1785, 2794 |
| XspI | CTAG | 9 cut(s) | 449, 1202, 1229, 1529, 1538, 2799, 3296, 3831, 3905 |
| Zsp2I | ATGCAT | 1 cut(s) | 1383 |