Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000972

Physical Location & Seq

Genomic Coordinates Forward (+)

61546424 .. 61551288

Gene Structure 4865 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG399200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCGGCGTTAAGATCGGGCGGCCGGAAGCTCTCGTTCGAGATTCTGAGCAGGAACAGCTCCCCCGAAGAAGAAGAAGCCGGACTCTTCTACCGATCCAACTCAGATCCAATCCGATCGAGCCACGACGCCACCGACGATCACAAGCCGGCCGCCGCGCGAAGAAAACGCAAGAAGAAGAAGAGGACCGTCGCGAACTGCTCCATACCGGAGAGCCCGACCGCCGCGGAGGACGACGCCGTTAAGAACGACGTGACTAACGGATTGGAATTCAATTATAGCCAGACGGTGCTGTGCTCCGTCACGACGGAGGTCGTCAGCGACCCGGAGTTTCAGAATAATTTTGGCGCGCCCGAATTGAGGCAGAGGACTGTCAATGCCGGCGCCGGAGGAGGAGTTGTGGGCGAAACGACGCCTTCCGGTGCTTTAGAAGGTGAGGCCAATGCAAAGGAGGAGAGTGGCGTCGAGGCCGCGGCGGCTCCGGTGGCCAAGCTGAACGGCAGTGTGGTTCCGAAATTGCAGAGCGCCAAGTCGTTAGATTGGCAACGGGTCATGGCCGAAGATCCGAATTATATGTTTTCAGTGGACAAGTCTCCACTGAAGTACTTCATGGAAGAAATGTCTAATGGGAATTCATTAAGGAGCACAACAACCCTTGGAAATGAGAAAGAAAGAGAGAGGGTTTATGATACTATCTTTCGCTTACCTTGGAGATGTGAATTGCTGATAGATGTTGGCTTTTTCGTGTGTCTTGATTCGTTTCTCTCGCTGTTGACTATCATGCCAACAAGAATTTTGATGACCCTTTGGAGGCTTGTGCAAACAAGGCAGTTTAAGAGGCCATCTGCAGCAGAGCTGTCTGATTTTGGGTGTTTTACGATAATGGCTTGTGGTGTCATTCTTTTGGAGCAAACAGATATCAGCTTAATATATCACATGATTCGTGGTCAAGGAACAATCAAATTGTATGTGGTGTACAATGTCTTGGAGATATTTGACAAACTATGTCAAAGTTTTAATGGAGATGTATTGCAAACTCTATTTAACTCGGCAGACGGACTTGCTAGCTGTCCAACAGAAAACATGAGATTCTGGATTTGGAGATTTACTTGTGACCAAGCTTTAGCCGTGACTGCCTCAATTATTCATTCGTTTATCCTCTTAGCTCAGGCGATTACTTTGTCAACCTGCATTGTTGCTCACAATAATGCCTTGTTTGCTTTGCTGGTGTCCAATAACTTTGCCGAGATAAAAAGCAACGTGTTCAAGCGATATAGTAAGGAAAACATTCATAGCCTGGTATACTTTGATTCAGTGGAGAGATTCCACATTTCTGCATTTATTATATTCATCCTAGCTCAAAACATTCTGGAGGCTGAGGGTCCCTGGTTTGAAAGTTTTCTTTTTAACGCTGGTGTGGTTTTCGTCTGTGAAATGATTATTGATATCGTAAAGCACTCGTTCATTGCTAAGTTCAATGACATAAAGCCCATTGCATACTCTGAGTTTCTTGAAGACCTATGTAAGCAGGTACTGTTTTGTTCAAAGTGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006935 GO:0007275 GO:0008104 GO:0008150 GO:0009605 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009987 GO:0010154 GO:0010183 GO:0012505 GO:0022414 GO:0031974 GO:0032501 GO:0032502 GO:0032507 GO:0033036 GO:0033365 GO:0034613 GO:0035437 GO:0040011 GO:0042221 GO:0042330 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045185 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0050896 GO:0050918 GO:0051179 GO:0051235 GO:0051641 GO:0051651 GO:0051704 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070972 GO:0072595

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF747

Protein Analysis

518

Amino Acids

57.86

Weight (kDa)

5.57

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF747	PF05346	283 - 512	2.2e-80	Eukaryotic membrane protein family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67960
fragaria_vesca	FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240 FvH4_4g33240
malus_domestica	MD13G1017500.v1.1 MD13G1017700.v1.1 MD16G1015700.v1.1
prunus_persica	Prupe.1G335900_v2.0.a1 Prupe.1G335900_v2.0.a1 Prupe.1G335900_v2.0.a1
pyrus_communis	pycom13g01510 pycom13g01520 pycom16g01460
rosa_chinensis	RchiOBHm_Chr2g0114371 RchiOBHm_Chr4g0390701 RchiOBHm_Chr4g0442391 RchiOBHm_Chr5g0078431 RchiOBHm_Chr6g0287871
rosa_laevigata	RLG00000017993 RLG00000020662 RLG00000032414
rosa_multiflora	Rmu_sc0000346.1_g000015 Rmu_sc0006380.1_g000001 Rmu_sc0006478.1_g000002 Rmu_sc0036628.1_g000001 Rmu_ssc0000204.1_g000063
rosa_roxburghii	Rroxscaffold_2G00081610 Rroxscaffold_3G00248840 Rroxscaffold_5G00383240 Rroxscaffold_7G00183810
rosa_rugosa	Rorug04G0340800
rosa_samantha	Rh1AG155700 Rh1AG281100 Rh1CG145900 Rh2BG511100 Rh2BG570500 Rh2CG250700 Rh2DG255000 Rh2DG522900 Rh4AG033000 Rh4AG392400 Rh4BG026900 Rh4BG406100 Rh4CG421200 Rh4DG399200 Rh5AG369200 Rh5DG164900 Rh6BG139300 Rh6CG132300 Rh6DG122800 Rh7DG359500
rosa_wichuraiana	Rw2G010190 Rw4G033890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1196, 1519
AccB1I	GGYRCC	1 cut(s)	383
AccI	GTMKAC	1 cut(s)	1302
AccII	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
AclWI	GGATC	3 cut(s)	90, 101, 557
AcoI	YGGCCR	4 cut(s)	22, 150, 486, 555
AcsI	RAATTY	3 cut(s)	269, 631, 792
AcuI	CTGAAG	1 cut(s)	620
AcyI	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
AfaI	GTAC	3 cut(s)	605, 977, 1533
AfiI	CCNNNNNNNGG	2 cut(s)	360, 810
AflIII	ACRYGT	1 cut(s)	1260
AgsI	TTSAA	6 cut(s)	274, 1267, 1394, 1477, 1514, 1545
AjiI	CACGTC	1 cut(s)	253
AjnI	CCWGG	2 cut(s)	1296, 1385
AluBI	AGCT	9 cut(s)	31, 60, 493, 856, 924, 1068, 1121, 1166, 1358
AluI	AGCT	9 cut(s)	31, 60, 493, 856, 924, 1068, 1121, 1166, 1358
Alw21I	GWGCWC	2 cut(s)	299, 647
Alw26I	GTCTC	1 cut(s)	597
AlwI	GGATC	3 cut(s)	90, 101, 557
AlwNI	CAGNNNCTG	1 cut(s)	1534
AoxI	GGCC	7 cut(s)	22, 150, 438, 468, 486, 555, 839
ApeKI	GCWGC	1 cut(s)	848
ApoI	RAATTY	3 cut(s)	269, 631, 792
AscI	GGCGCGCC	1 cut(s)	348
Asp700I	GAANNNNTTC	3 cut(s)	605, 1287, 1398
AspLEI	GCGC	5 cut(s)	160, 350, 352, 386, 527
AspS9I	GGNCC	2 cut(s)	186, 1382
AsuC2I	CCSGG	1 cut(s)	326
AsuHPI	GGTGA	1 cut(s)	446
AsuNHI	GCTAGC	1 cut(s)	1064
AvaII	GGWCC	2 cut(s)	186, 1382
BalI	TGGCCA	1 cut(s)	488
BanI	GGYRCC	1 cut(s)	383
BanII	GRGCYC	1 cut(s)	218
BbsI	GAAGAC	1 cut(s)	1521
Bbv12I	GWGCWC	2 cut(s)	299, 647
BbvCI	CCTCAGC	1 cut(s)	1377
BbvI	GCAGC	1 cut(s)	860
BccI	CCATC	1 cut(s)	850
BceAI	ACGGC	3 cut(s)	224, 514, 1112
BciT130I	CCWGG	2 cut(s)	1298, 1387
BcnI	CCSGG	1 cut(s)	326
BcoDI	GTCTC	1 cut(s)	597
BfaI	CTAG	2 cut(s)	1065, 1355
BfmI	CTRYAG	1 cut(s)	846
BfoI	RGCGCY	2 cut(s)	387, 528
BfuAI	ACCTGC	2 cut(s)	1196, 1519
BglI	GCCNNNNNGGC	1 cut(s)	476
BisI	GCNGC	9 cut(s)	6, 22, 153, 156, 225, 471, 474, 477, 849
BlsI	GCNGC	9 cut(s)	7, 23, 154, 157, 226, 472, 475, 478, 850
BmcAI	AGTACT	1 cut(s)	605
Bme1390I	CCNGG	3 cut(s)	326, 1298, 1387
Bme18I	GGWCC	2 cut(s)	186, 1382
BmgBI	CACGTC	1 cut(s)	253
BmgT120I	GGNCC	2 cut(s)	186, 1382
BmiI	GGNNCC	5 cut(s)	385, 480, 510, 1383, 1384
BmrFI	CCNGG	3 cut(s)	326, 1298, 1387
BmtI	GCTAGC	1 cut(s)	1068
BoxI	GACNNNNGTC	1 cut(s)	311
BpiI	GAAGAC	1 cut(s)	1521
BpmI	CTGGAG	1 cut(s)	1391
Bpu10I	CCTNAGC	2 cut(s)	1167, 1377
BpuMI	CCSGG	1 cut(s)	326
BsaHI	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
BsaJI	CCNNGG	5 cut(s)	225, 471, 655, 707, 1385
BsaWI	WCCGGW	3 cut(s)	208, 419, 481
BsaXI	ACNNNNNCTCC	4 cut(s)	381, 384, 411, 414
Bsc4I	CCNNNNNNNGG	2 cut(s)	360, 810
Bse118I	RCCGGY	2 cut(s)	148, 380
Bse3DI	GCAATG	2 cut(s)	1464, 1491
BseBI	CCWGG	2 cut(s)	1298, 1387
BseDI	CCNNGG	5 cut(s)	225, 471, 655, 707, 1385
BseGI	GGATG	1 cut(s)	1350
BseLI	CCNNNNNNNGG	2 cut(s)	360, 810
BseMI	GCAATG	2 cut(s)	1464, 1491
BseMII	CTCAG	5 cut(s)	38, 117, 1181, 1368, 1494
BsePI	GCGCGC	1 cut(s)	348
BseRI	GAGGAG	3 cut(s)	405, 408, 467
BseX3I	CGGCCG	2 cut(s)	22, 150
BseXI	GCAGC	1 cut(s)	860
Bsh1236I	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
Bsh1285I	CGRYCG	4 cut(s)	25, 119, 153, 222
BshFI	GGCC	7 cut(s)	24, 152, 440, 470, 488, 557, 841
BshNI	GGYRCC	1 cut(s)	383
BsiEI	CGRYCG	4 cut(s)	25, 119, 153, 222
BsiHKAI	GWGCWC	2 cut(s)	299, 647
BsiSI	CCGG	9 cut(s)	25, 81, 149, 209, 326, 381, 387, 420, 482
BslFI	GGGAC	1 cut(s)	1368
BslI	CCNNNNNNNGG	2 cut(s)	360, 810
BsmAI	GTCTC	1 cut(s)	597
BsmFI	GGGAC	1 cut(s)	1368
BsnI	GGCC	7 cut(s)	24, 152, 440, 470, 488, 557, 841
Bsp1286I	GDGCHC	3 cut(s)	218, 299, 647
Bsp1407I	TGTACA	1 cut(s)	975
Bsp143I	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
Bsp68I	TCGCGA	1 cut(s)	194
BspANI	GGCC	7 cut(s)	24, 152, 440, 470, 488, 557, 841
BspCNI	CTCAG	5 cut(s)	39, 116, 1180, 1369, 1495
BspFNI	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
BspLI	GGNNCC	5 cut(s)	385, 480, 510, 1383, 1384
BspMAI	CTGCAG	1 cut(s)	850
BspMI	ACCTGC	2 cut(s)	1196, 1519
BspOI	GCTAGC	1 cut(s)	1068
BspPI	GGATC	3 cut(s)	90, 101, 557
BspT107I	GGYRCC	1 cut(s)	383
BsrDI	GCAATG	2 cut(s)	1464, 1491
BsrFI	RCCGGY	2 cut(s)	148, 380
BsrGI	TGTACA	1 cut(s)	975
BssAI	RCCGGY	2 cut(s)	148, 380
BssECI	CCNNGG	5 cut(s)	225, 471, 655, 707, 1385
BssHII	GCGCGC	1 cut(s)	348
BssMI	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
BssNAI	GTATAC	1 cut(s)	1303
BssNI	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
BssT1I	CCWWGG	2 cut(s)	655, 707
Bst1107I	GTATAC	1 cut(s)	1303
Bst2UI	CCWGG	2 cut(s)	1298, 1387
Bst4CI	ACNGT	4 cut(s)	190, 289, 373, 1536
Bst6I	CTCTTC	2 cut(s)	92, 176
BstACI	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
BstAUI	TGTACA	1 cut(s)	975
BstC8I	GCNNGC	4 cut(s)	150, 350, 382, 1066
BstDEI	CTNAG	7 cut(s)	47, 103, 1162, 1167, 1377, 1470, 1503
BstDSI	CCRYGG	2 cut(s)	225, 471
BstF5I	GGATG	1 cut(s)	1350
BstFNI	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
BstH2I	RGCGCY	2 cut(s)	387, 528
BstHHI	GCGC	5 cut(s)	160, 350, 352, 386, 527
BstKTI	GATC	6 cut(s)	17, 98, 109, 119, 142, 565
BstMAI	GTCTC	1 cut(s)	597
BstMBI	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
BstMCI	CGRYCG	4 cut(s)	25, 119, 153, 222
BstMWI	GCNNNNNNNGC	6 cut(s)	57, 476, 485, 826, 1133, 1217
BstNI	CCWGG	2 cut(s)	1298, 1387
BstPAI	GACNNNNGTC	1 cut(s)	311
BstSCI	CCNGG	3 cut(s)	324, 1296, 1385
BstSFI	CTRYAG	1 cut(s)	846
BstUI	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
BstV1I	GCAGC	1 cut(s)	860
BstV2I	GAAGAC	1 cut(s)	1521
BstX2I	RGATCY	2 cut(s)	106, 562
BstYI	RGATCY	2 cut(s)	106, 562
BstZ17I	GTATAC	1 cut(s)	1303
BstZI	CGGCCG	2 cut(s)	22, 150
BsuRI	GGCC	7 cut(s)	24, 152, 440, 470, 488, 557, 841
BtgI	CCRYGG	2 cut(s)	225, 471
BtrI	CACGTC	1 cut(s)	253
BtsCI	GGATG	1 cut(s)	1350
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	4 cut(s)	508, 588, 596, 1320
BtuMI	TCGCGA	1 cut(s)	194
BveI	ACCTGC	2 cut(s)	1196, 1519
Cac8I	GCNNGC	4 cut(s)	150, 350, 382, 1066
CaiI	CAGNNNCTG	1 cut(s)	1534
CfoI	GCGC	5 cut(s)	160, 350, 352, 386, 527
Cfr10I	RCCGGY	2 cut(s)	148, 380
Cfr13I	GGNCC	2 cut(s)	186, 1382
Cfr42I	CCGCGG	2 cut(s)	228, 474
CseI	GACGC	4 cut(s)	137, 245, 421, 451
Csp6I	GTAC	3 cut(s)	604, 976, 1532
CviAII	CATG	5 cut(s)	553, 610, 781, 937, 1084
CviQI	GTAC	3 cut(s)	604, 976, 1532
DdeI	CTNAG	7 cut(s)	47, 103, 1162, 1167, 1377, 1470, 1503
DinI	GGCGCC	1 cut(s)	385
DpnI	GATC	6 cut(s)	16, 97, 108, 118, 141, 564
DpnII	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
EaeI	YGGCCR	4 cut(s)	22, 150, 486, 555
EagI	CGGCCG	2 cut(s)	22, 150
Eam1104I	CTCTTC	2 cut(s)	92, 176
EarI	CTCTTC	2 cut(s)	92, 176
EclXI	CGGCCG	2 cut(s)	22, 150
Eco130I	CCWWGG	2 cut(s)	655, 707
Eco24I	GRGCYC	1 cut(s)	218
Eco32I	GATATC	2 cut(s)	919, 1447
Eco47I	GGWCC	2 cut(s)	186, 1382
Eco52I	CGGCCG	2 cut(s)	22, 150
Eco57I	CTGAAG	1 cut(s)	620
EcoO109I	RGGNCCY	1 cut(s)	1382
EcoRI	GAATTC	2 cut(s)	269, 631
EcoRII	CCWGG	2 cut(s)	1296, 1385
EcoRV	GATATC	2 cut(s)	919, 1447
EcoT14I	CCWWGG	2 cut(s)	655, 707
EcoT38I	GRGCYC	1 cut(s)	218
EgeI	GGCGCC	1 cut(s)	385
EheI	GGCGCC	1 cut(s)	385
ErhI	CCWWGG	2 cut(s)	655, 707
FaeI	CATG	5 cut(s)	556, 613, 784, 940, 1087
FaqI	GGGAC	1 cut(s)	1368
FatI	CATG	5 cut(s)	552, 609, 780, 936, 1083
FblI	GTMKAC	1 cut(s)	1302
Fnu4HI	GCNGC	9 cut(s)	6, 22, 153, 156, 225, 471, 474, 477, 849
FokI	GGATG	1 cut(s)	1337
FriOI	GRGCYC	1 cut(s)	218
Fsp4HI	GCNGC	9 cut(s)	6, 22, 153, 156, 225, 471, 474, 477, 849
FspBI	CTAG	2 cut(s)	1065, 1355
GlaI	GCGC	5 cut(s)	159, 349, 351, 385, 526
GluI	GCNGC	9 cut(s)	6, 22, 153, 156, 225, 471, 474, 477, 849
GsuI	CTGGAG	1 cut(s)	1391
HaeII	RGCGCY	2 cut(s)	387, 528
HaeIII	GGCC	7 cut(s)	24, 152, 440, 470, 488, 557, 841
HapII	CCGG	9 cut(s)	25, 81, 149, 209, 326, 381, 387, 420, 482
HgaI	GACGC	4 cut(s)	137, 245, 421, 451
HhaI	GCGC	5 cut(s)	160, 350, 352, 386, 527
Hin1I	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
Hin1II	CATG	5 cut(s)	556, 613, 784, 940, 1087
Hin6I	GCGC	5 cut(s)	158, 348, 350, 384, 525
HinP1I	GCGC	5 cut(s)	158, 348, 350, 384, 525
HincII	GTYRAC	2 cut(s)	774, 1185
HindII	GTYRAC	2 cut(s)	774, 1185
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	7 cut(s)	43, 84, 755, 940, 1089, 1310, 1323
HpaII	CCGG	9 cut(s)	25, 81, 149, 209, 326, 381, 387, 420, 482
HphI	GGTGA	1 cut(s)	446
Hpy166II	GTNNAC	5 cut(s)	586, 774, 976, 1185, 1303
Hpy188I	TCNGA	8 cut(s)	48, 106, 116, 336, 513, 567, 862, 1504
Hpy188III	TCNNGA	7 cut(s)	40, 193, 304, 752, 1093, 1370, 1511
Hpy8I	GTNNAC	5 cut(s)	586, 774, 976, 1185, 1303
Hpy99I	CGWCG	8 cut(s)	131, 140, 194, 239, 254, 310, 415, 467
HpyAV	CCTTC	2 cut(s)	425, 426
HpyCH4III	ACNGT	4 cut(s)	190, 289, 373, 1536
HpyCH4IV	ACGT	2 cut(s)	252, 1260
HpyCH4V	TGCA	8 cut(s)	446, 520, 820, 848, 1033, 1191, 1337, 1496
HpyF10VI	GCNNNNNNNGC	6 cut(s)	57, 476, 485, 826, 1133, 1217
HpyF3I	CTNAG	7 cut(s)	47, 103, 1162, 1167, 1377, 1470, 1503
HpySE526I	ACGT	2 cut(s)	252, 1260
Hsp92I	GRCGYC	5 cut(s)	129, 237, 384, 413, 462
Hsp92II	CATG	5 cut(s)	556, 613, 784, 940, 1087
HspAI	GCGC	5 cut(s)	158, 348, 350, 384, 525
KasI	GGCGCC	1 cut(s)	383
KflI	GGGWCCC	1 cut(s)	1382
KroI	GCCGGC	2 cut(s)	148, 380
KroNI	GCCGGC	2 cut(s)	150, 382
KspI	CCGCGG	2 cut(s)	228, 474
Kzo9I	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
LmnI	GCTCC	6 cut(s)	65, 206, 302, 484, 642, 907
Lsp1109I	GCAGC	1 cut(s)	860
MaeI	CTAG	2 cut(s)	1065, 1355
MaeII	ACGT	2 cut(s)	252, 1260
MaeIII	GTNAC	4 cut(s)	253, 301, 1112, 1129
MalI	GATC	6 cut(s)	16, 97, 108, 118, 141, 564
MboI	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
MflI	RGATCY	2 cut(s)	106, 562
MhlI	GDGCHC	3 cut(s)	218, 299, 647
MlsI	TGGCCA	1 cut(s)	488
MluNI	TGGCCA	1 cut(s)	488
Mly113I	GGCGCC	1 cut(s)	384
MlyI	GAGTC	1 cut(s)	78
MmeI	TCCRAC	2 cut(s)	123, 1097
Mox20I	TGGCCA	1 cut(s)	488
MroNI	GCCGGC	2 cut(s)	148, 380
MroXI	GAANNNNTTC	3 cut(s)	605, 1287, 1398
MscI	TGGCCA	1 cut(s)	488
MseI	TTAA	8 cut(s)	11, 243, 638, 834, 926, 1017, 1044, 1407
MslI	CAYNNNNRTG	1 cut(s)	1206
Msp20I	TGGCCA	1 cut(s)	488
MspA1I	CMGCKG	2 cut(s)	227, 473
MspI	CCGG	9 cut(s)	25, 81, 149, 209, 326, 381, 387, 420, 482
MspR9I	CCNGG	3 cut(s)	326, 1298, 1387
MvaI	CCWGG	2 cut(s)	1298, 1387
MvnI	CGCG	6 cut(s)	158, 160, 194, 227, 350, 473
MwoI	GCNNNNNNNGC	6 cut(s)	57, 476, 485, 826, 1133, 1217
NaeI	GCCGGC	2 cut(s)	150, 382
NarI	GGCGCC	1 cut(s)	384
NciI	CCSGG	1 cut(s)	326
NdeII	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
NgoMIV	GCCGGC	2 cut(s)	148, 380
NheI	GCTAGC	1 cut(s)	1064
NlaIII	CATG	5 cut(s)	556, 613, 784, 940, 1087
NlaIV	GGNNCC	5 cut(s)	385, 480, 510, 1383, 1384
NmeAIII	GCCGAG	2 cut(s)	1028, 1270
NmuCI	GTSAC	4 cut(s)	253, 301, 1112, 1129
NruI	TCGCGA	1 cut(s)	194
PalAI	GGCGCGCC	1 cut(s)	348
PauI	GCGCGC	1 cut(s)	348
PcsI	WCGNNNNNNNCGW	2 cut(s)	132, 135
PdiI	GCCGGC	2 cut(s)	150, 382
PdmI	GAANNNNTTC	3 cut(s)	605, 1287, 1398
PfeI	GAWTC	6 cut(s)	43, 755, 940, 1089, 1310, 1323
PkrI	GCNGC	9 cut(s)	7, 23, 154, 157, 226, 472, 475, 478, 850
Ple19I	CGATCG	1 cut(s)	119
PleI	GAGTC	1 cut(s)	78
PluTI	GGCGCC	1 cut(s)	387
PpsI	GAGTC	1 cut(s)	78
PpuMI	RGGWCCY	1 cut(s)	1382
PshAI	GACNNNNGTC	1 cut(s)	311
Psp5II	RGGWCCY	1 cut(s)	1382
Psp6I	CCWGG	2 cut(s)	1296, 1385
PspGI	CCWGG	2 cut(s)	1296, 1385
PspN4I	GGNNCC	5 cut(s)	385, 480, 510, 1383, 1384
PspPI	GGNCC	2 cut(s)	186, 1382
PspPPI	RGGWCCY	1 cut(s)	1382
PstI	CTGCAG	1 cut(s)	850
PstNI	CAGNNNCTG	1 cut(s)	1534
PsuI	RGATCY	2 cut(s)	106, 562
PteI	GCGCGC	1 cut(s)	348
PvuI	CGATCG	1 cut(s)	119
RruI	TCGCGA	1 cut(s)	194
RsaI	GTAC	3 cut(s)	605, 977, 1533
RsaNI	GTAC	3 cut(s)	604, 976, 1532
RseI	CAYNNNNRTG	1 cut(s)	1206
SacII	CCGCGG	2 cut(s)	228, 474
SaqAI	TTAA	8 cut(s)	11, 243, 638, 834, 926, 1017, 1044, 1407
SatI	GCNGC	9 cut(s)	6, 22, 153, 156, 225, 471, 474, 477, 849
Sau3AI	GATC	6 cut(s)	14, 95, 106, 116, 139, 562
Sau96I	GGNCC	2 cut(s)	186, 1382
ScaI	AGTACT	1 cut(s)	605
SchI	GAGTC	1 cut(s)	78
ScrFI	CCNGG	3 cut(s)	326, 1298, 1387
SduI	GDGCHC	3 cut(s)	218, 299, 647
SfcI	CTRYAG	1 cut(s)	846
SfoI	GGCGCC	1 cut(s)	385
Sfr303I	CCGCGG	2 cut(s)	228, 474
SgrBI	CCGCGG	2 cut(s)	228, 474
SgsI	GGCGCGCC	1 cut(s)	348
SinI	GGWCC	2 cut(s)	186, 1382
SmiMI	CAYNNNNRTG	1 cut(s)	1206
SspDI	GGCGCC	1 cut(s)	383
SspMI	CTAG	2 cut(s)	1065, 1355
StyD4I	CCNGG	3 cut(s)	324, 1296, 1385
StyI	CCWWGG	2 cut(s)	655, 707
TaaI	ACNGT	4 cut(s)	190, 289, 373, 1536
TaiI	ACGT	2 cut(s)	255, 1263
TaqI	TCGA	3 cut(s)	39, 119, 465
TatI	WGTACW	2 cut(s)	603, 975
TauI	GCSGC	8 cut(s)	8, 24, 155, 158, 227, 473, 476, 479
TfiI	GAWTC	6 cut(s)	43, 755, 940, 1089, 1310, 1323
Tru1I	TTAA	8 cut(s)	11, 243, 638, 834, 926, 1017, 1044, 1407
Tru9I	TTAA	8 cut(s)	11, 243, 638, 834, 926, 1017, 1044, 1407
TscAI	CASTG	4 cut(s)	508, 588, 603, 1320
TseFI	GTSAC	4 cut(s)	253, 301, 1112, 1129
TseI	GCWGC	1 cut(s)	848
Tsp45I	GTSAC	4 cut(s)	253, 301, 1112, 1129
TspDTI	ATGAA	6 cut(s)	598, 624, 1136, 1280, 1339, 1453
TspGWI	ACGGA	4 cut(s)	276, 289, 323, 1071
TspRI	CASTG	4 cut(s)	508, 588, 603, 1320
VpaK11BI	GGWCC	2 cut(s)	186, 1382
XapI	RAATTY	3 cut(s)	269, 631, 792
XmiI	GTMKAC	1 cut(s)	1302
XmnI	GAANNNNTTC	3 cut(s)	605, 1287, 1398
XspI	CTAG	2 cut(s)	1065, 1355
ZrmI	AGTACT	1 cut(s)	605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.