No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0035511 RchiOBHm_Chr6g0307831 |
| rosa_laevigata | RLG00000004051 RLG00000005920 RLG00000007149 RLG00000007505 RLG00000009057 RLG00000018692 RLG00000019983 RLG00000020477 RLG00000033649 RLG00000034124 RLG00000035107 |
| rosa_multiflora | Rmu_ssc0000361.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00259640 Rroxscaffold_5G00352810 |
| rosa_rugosa | Rorug01G0371800 |
| rosa_samantha | Rh2AG452400 Rh2BG001100 Rh3CG298200 Rh4BG362700 Rh4CG376900 Rh5BG175700 Rh5BG245800 Rh6AG197200 Rh6AG470100 Rh6BG429500 Rh6CG081300 Rh6DG076700 Rh6DG517600 Rh7BG460800 Rh7CG163300 Rh7DG158600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 189 |
| AciI | CCGC | 4 cut(s) | 50, 97, 100, 141 |
| AcyI | GRCGYC | 1 cut(s) | 62 |
| AjnI | CCWGG | 1 cut(s) | 31 |
| AleI | CACNNNNGTG | 1 cut(s) | 80 |
| Alw26I | GTCTC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 1 cut(s) | 130 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| BaeGI | GKGCMC | 1 cut(s) | 194 |
| BanI | GGYRCC | 1 cut(s) | 189 |
| BbvI | GCAGC | 1 cut(s) | 142 |
| BccI | CCATC | 1 cut(s) | 109 |
| BciT130I | CCWGG | 1 cut(s) | 33 |
| BcoDI | GTCTC | 1 cut(s) | 116 |
| BisI | GCNGC | 3 cut(s) | 51, 98, 131 |
| BlsI | GCNGC | 3 cut(s) | 52, 99, 132 |
| Bme1390I | CCNGG | 1 cut(s) | 33 |
| BmiI | GGNNCC | 1 cut(s) | 191 |
| BmrFI | CCNGG | 1 cut(s) | 33 |
| BmrI | ACTGGG | 1 cut(s) | 23 |
| BmuI | ACTGGG | 1 cut(s) | 23 |
| BsaHI | GRCGYC | 1 cut(s) | 62 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| Bse1I | ACTGG | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 33 |
| BseGI | GGATG | 1 cut(s) | 63 |
| BseNI | ACTGG | 1 cut(s) | 18 |
| BseSI | GKGCMC | 1 cut(s) | 194 |
| BseXI | GCAGC | 1 cut(s) | 142 |
| BseYI | CCCAGC | 1 cut(s) | 53 |
| BshNI | GGYRCC | 1 cut(s) | 189 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BsmAI | GTCTC | 1 cut(s) | 116 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 194 |
| Bsp143I | GATC | 1 cut(s) | 24 |
| BspACI | CCGC | 4 cut(s) | 50, 97, 100, 141 |
| BspLI | GGNNCC | 1 cut(s) | 191 |
| BspT107I | GGYRCC | 1 cut(s) | 189 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrI | ACTGG | 1 cut(s) | 18 |
| BssMI | GATC | 1 cut(s) | 24 |
| BssNI | GRCGYC | 1 cut(s) | 62 |
| Bst2UI | CCWGG | 1 cut(s) | 33 |
| Bst4CI | ACNGT | 2 cut(s) | 79, 170 |
| BstACI | GRCGYC | 1 cut(s) | 62 |
| BstC8I | GCNNGC | 1 cut(s) | 143 |
| BstF5I | GGATG | 1 cut(s) | 63 |
| BstKTI | GATC | 1 cut(s) | 27 |
| BstMAI | GTCTC | 1 cut(s) | 116 |
| BstMBI | GATC | 1 cut(s) | 24 |
| BstNI | CCWGG | 1 cut(s) | 33 |
| BstSCI | CCNGG | 1 cut(s) | 31 |
| BstSLI | GKGCMC | 1 cut(s) | 194 |
| BstV1I | GCAGC | 1 cut(s) | 142 |
| BtsCI | GGATG | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 1 cut(s) | 143 |
| CseI | GACGC | 1 cut(s) | 70 |
| CsiI | ACCWGGT | 1 cut(s) | 31 |
| CviJI | RGCY | 3 cut(s) | 53, 89, 145 |
| CviKI_1 | RGCY | 3 cut(s) | 53, 89, 145 |
| DpnI | GATC | 1 cut(s) | 26 |
| DpnII | GATC | 1 cut(s) | 24 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 31 |
| FaiI | YATR | 1 cut(s) | 196 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FauI | CCCGC | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 3 cut(s) | 51, 98, 131 |
| FokI | GGATG | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 3 cut(s) | 51, 98, 131 |
| GluI | GCNGC | 3 cut(s) | 51, 98, 131 |
| GsaI | CCCAGC | 1 cut(s) | 57 |
| HgaI | GACGC | 1 cut(s) | 70 |
| Hin1I | GRCGYC | 1 cut(s) | 62 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 1 cut(s) | 29 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 2 cut(s) | 79, 170 |
| HpyCH4V | TGCA | 1 cut(s) | 130 |
| Hsp92I | GRCGYC | 1 cut(s) | 62 |
| Kzo9I | GATC | 1 cut(s) | 24 |
| LpnPI | CCDG | 4 cut(s) | 18, 39, 45, 140 |
| Lsp1109I | GCAGC | 1 cut(s) | 142 |
| MabI | ACCWGGT | 1 cut(s) | 31 |
| MalI | GATC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 24 |
| MhlI | GDGCHC | 1 cut(s) | 194 |
| MnlI | CCTC | 2 cut(s) | 75, 100 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 33 |
| MvaI | CCWGG | 1 cut(s) | 33 |
| NdeII | GATC | 1 cut(s) | 24 |
| NlaIV | GGNNCC | 1 cut(s) | 191 |
| OliI | CACNNNNGTG | 1 cut(s) | 80 |
| PkrI | GCNGC | 3 cut(s) | 52, 99, 132 |
| Psp6I | CCWGG | 1 cut(s) | 31 |
| PspFI | CCCAGC | 1 cut(s) | 53 |
| PspGI | CCWGG | 1 cut(s) | 31 |
| PspN4I | GGNNCC | 1 cut(s) | 191 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SatI | GCNGC | 3 cut(s) | 51, 98, 131 |
| Sau3AI | GATC | 1 cut(s) | 24 |
| ScrFI | CCNGG | 1 cut(s) | 33 |
| SduI | GDGCHC | 1 cut(s) | 194 |
| SetI | ASST | 2 cut(s) | 34, 128 |
| SexAI | ACCWGGT | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| SsiI | CCGC | 4 cut(s) | 50, 97, 100, 141 |
| StyD4I | CCNGG | 1 cut(s) | 31 |
| TaaI | ACNGT | 2 cut(s) | 79, 170 |
| TaqI | TCGA | 2 cut(s) | 113, 162 |
| TauI | GCSGC | 2 cut(s) | 53, 100 |
| TseI | GCWGC | 1 cut(s) | 130 |