OTU domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| OTU | PF02338 | 18 - 95 | 1.2e-12 | OTU-like cysteine protease |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 54 |
| AciI | CCGC | 1 cut(s) | 54 |
| AclWI | GGATC | 1 cut(s) | 362 |
| AcsI | RAATTY | 1 cut(s) | 179 |
| AfaI | GTAC | 1 cut(s) | 243 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 264, 265 |
| AflIII | ACRYGT | 1 cut(s) | 297 |
| AgsI | TTSAA | 2 cut(s) | 218, 363 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 210, 242 |
| AluBI | AGCT | 3 cut(s) | 95, 157, 247 |
| AluI | AGCT | 3 cut(s) | 95, 157, 247 |
| AlwI | GGATC | 1 cut(s) | 362 |
| ApoI | RAATTY | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 35 |
| BccI | CCATC | 3 cut(s) | 53, 124, 141 |
| BfaI | CTAG | 1 cut(s) | 384 |
| BfmI | CTRYAG | 1 cut(s) | 304 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 264, 265 |
| Bse1I | ACTGG | 1 cut(s) | 409 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 264, 265 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BseNI | ACTGG | 1 cut(s) | 409 |
| BseRI | GAGGAG | 1 cut(s) | 205 |
| Bsh1236I | CGCG | 1 cut(s) | 54 |
| Bsh1285I | CGRYCG | 1 cut(s) | 36 |
| BsiEI | CGRYCG | 1 cut(s) | 36 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 264, 265 |
| Bsp1407I | TGTACA | 1 cut(s) | 241 |
| Bsp143I | GATC | 2 cut(s) | 40, 354 |
| BspACI | CCGC | 1 cut(s) | 54 |
| BspCNI | CTCAG | 1 cut(s) | 271 |
| BspFNI | CGCG | 1 cut(s) | 54 |
| BspPI | GGATC | 1 cut(s) | 362 |
| BsrGI | TGTACA | 1 cut(s) | 241 |
| BsrI | ACTGG | 1 cut(s) | 409 |
| BssMI | GATC | 2 cut(s) | 40, 354 |
| Bst4CI | ACNGT | 2 cut(s) | 308, 372 |
| BstAUI | TGTACA | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 1 cut(s) | 275 |
| BstDEI | CTNAG | 3 cut(s) | 101, 158, 279 |
| BstFNI | CGCG | 1 cut(s) | 54 |
| BstKTI | GATC | 2 cut(s) | 43, 357 |
| BstMBI | GATC | 2 cut(s) | 40, 354 |
| BstMCI | CGRYCG | 1 cut(s) | 36 |
| BstNSI | RCATGY | 1 cut(s) | 301 |
| BstSFI | CTRYAG | 1 cut(s) | 304 |
| BstUI | CGCG | 1 cut(s) | 54 |
| BstX2I | RGATCY | 1 cut(s) | 354 |
| BstYI | RGATCY | 1 cut(s) | 354 |
| BtsIMutI | CAGTG | 1 cut(s) | 416 |
| Cac8I | GCNNGC | 1 cut(s) | 275 |
| Csp6I | GTAC | 1 cut(s) | 242 |
| CviAII | CATG | 3 cut(s) | 89, 298, 343 |
| CviJI | RGCY | 7 cut(s) | 95, 115, 132, 157, 197, 247, 277 |
| CviKI_1 | RGCY | 7 cut(s) | 95, 115, 132, 157, 197, 247, 277 |
| CviQI | GTAC | 1 cut(s) | 242 |
| DdeI | CTNAG | 3 cut(s) | 101, 158, 279 |
| DpnI | GATC | 2 cut(s) | 42, 356 |
| DpnII | GATC | 2 cut(s) | 40, 354 |
| EcoRI | GAATTC | 1 cut(s) | 179 |
| FaeI | CATG | 3 cut(s) | 92, 301, 346 |
| FaiI | YATR | 8 cut(s) | 50, 90, 250, 289, 299, 344, 422, 424 |
| FatI | CATG | 3 cut(s) | 88, 297, 342 |
| FspBI | CTAG | 1 cut(s) | 384 |
| HapII | CCGG | 1 cut(s) | 32 |
| Hin1II | CATG | 3 cut(s) | 92, 301, 346 |
| HinfI | GANTC | 2 cut(s) | 4, 400 |
| HpaII | CCGG | 1 cut(s) | 32 |
| HphI | GGTGA | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 138 |
| Hpy188III | TCNNGA | 2 cut(s) | 215, 352 |
| HpyAV | CCTTC | 3 cut(s) | 57, 160, 381 |
| HpyCH4III | ACNGT | 2 cut(s) | 308, 372 |
| HpyCH4V | TGCA | 2 cut(s) | 149, 346 |
| HpyF3I | CTNAG | 3 cut(s) | 101, 158, 279 |
| Hsp92II | CATG | 3 cut(s) | 92, 301, 346 |
| Kzo9I | GATC | 2 cut(s) | 40, 354 |
| LmnI | GCTCC | 1 cut(s) | 92 |
| LpnPI | CCDG | 5 cut(s) | 45, 93, 291, 337, 422 |
| MaeI | CTAG | 1 cut(s) | 384 |
| MalI | GATC | 2 cut(s) | 42, 356 |
| MboI | GATC | 2 cut(s) | 40, 354 |
| MboII | GAAGA | 2 cut(s) | 50, 230 |
| MflI | RGATCY | 1 cut(s) | 354 |
| MluCI | AATT | 1 cut(s) | 179 |
| MlyI | GAGTC | 1 cut(s) | 394 |
| MnlI | CCTC | 6 cut(s) | 7, 183, 186, 263, 303, 390 |
| MseI | TTAA | 3 cut(s) | 186, 204, 375 |
| MspI | CCGG | 1 cut(s) | 32 |
| MvnI | CGCG | 1 cut(s) | 54 |
| NdeII | GATC | 2 cut(s) | 40, 354 |
| NlaIII | CATG | 3 cut(s) | 92, 301, 346 |
| NspI | RCATGY | 1 cut(s) | 301 |
| PciI | ACATGT | 1 cut(s) | 297 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PleI | GAGTC | 1 cut(s) | 394 |
| PpsI | GAGTC | 1 cut(s) | 394 |
| PscI | ACATGT | 1 cut(s) | 297 |
| PsuI | RGATCY | 1 cut(s) | 354 |
| RsaI | GTAC | 1 cut(s) | 243 |
| RsaNI | GTAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 3 cut(s) | 186, 204, 375 |
| Sau3AI | GATC | 2 cut(s) | 40, 354 |
| SchI | GAGTC | 1 cut(s) | 394 |
| SetI | ASST | 6 cut(s) | 18, 68, 97, 159, 171, 249 |
| SfcI | CTRYAG | 1 cut(s) | 304 |
| Sse9I | AATT | 1 cut(s) | 179 |
| SsiI | CCGC | 1 cut(s) | 54 |
| SspMI | CTAG | 1 cut(s) | 384 |
| TaaI | ACNGT | 2 cut(s) | 308, 372 |
| TaqI | TCGA | 2 cut(s) | 36, 76 |
| TasI | AATT | 1 cut(s) | 179 |
| TatI | WGTACW | 1 cut(s) | 241 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 3 cut(s) | 186, 204, 375 |
| Tru9I | TTAA | 3 cut(s) | 186, 204, 375 |
| TscAI | CASTG | 1 cut(s) | 416 |
| TspDTI | ATGAA | 5 cut(s) | 17, 77, 172, 192, 331 |
| TspRI | CASTG | 1 cut(s) | 416 |
| XapI | RAATTY | 1 cut(s) | 179 |
| XceI | RCATGY | 1 cut(s) | 301 |
| XspI | CTAG | 1 cut(s) | 384 |