Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001526

Physical Location & Seq

Genomic Coordinates Forward (+)

51689992 .. 51692495

Gene Structure 2504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G034780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGCCTCACTCTTGAGCTCCACCCAACCACTTCCACCGGCGTTTAACCGAGGACCGGCTCCGGCCACGAAACCCGCAACCCTACGGGCACAGGCGACGCCCCATCCTCAACCCACTTCTAACACTAGTGCAGATAACAACGCTAGACTAGCAGTAACACAGAGAAAAGCAGTAGAGCTTCAGAGGCTAAAAGATAAGGAGGCCAAGGACAGAAAGGAGGAGACCAACAACAAGATAGCTTCTCGGAAAGCAATTTCGGTCGTTTTGCGGAGAGAAGCTACCAAATCCCACATCGAGAAGAAGAAAGGCTCCAAGAGACTGCTTCCCAGGACTGTGCTCGAAGCCCTCCATGAGAGAATCACTGCTCTGCGATGGGAGTCTGCTCTCAAGGTTTTTGAACTGCTGCAAGAGCAGCTCTGGTACCGGCCCAATCCTGGTGTTTACAATAAGCTAATTGTCATGCTAGGAAAATGTAAACAACCAGAAAAAGCTGAGGAGCTTTTTCAAGCTATGATTGACGAAGGCTGTGGTGTCAGCCATGAATCTTATACTGCTCTTATATCTGCCTATGGTAGGAGCAGTCTCTTTGAAAAAGCATTTTCCCTCCTTGAGCAGATGAAGAATACTCCTGACTGCCAGCCTGATGTCCATACTTATTCTATCCTCATAAAATCTTGCCTGCAGGTTTTTGCATATGACAAAGTGCAGGCTCTGCTTTCAGATATGGAAATTCAGCACATTAGACCAAACACCATCACATACAATACCCTGATCGATGCTTACGGGAAATCTAAAAAATTTGCAGAGATGGAGTCGACACTTGTGGCAATGCTTAGCCAACAGGATTGTGAGCCTGATGTCTGGACCATGAATTCCGTAGTGAGAGCCTTTGGCAGCAGTGGGCAAATAGAAACAATGGAGAAATGTTTTGAGAAGTTCCACAGTGCCGGAATCCAACCAAACATCATGACTTTCAACATTCTCCTCGATTCATATGGAAAAGCTGGGAATTATAAAAAAATGAGTGCTGTGATGGAATACATGCAGAAATACCATTACTCATGGACAATCGTTACATACAATGTGGTGATAGACGCATTTGGGAGGGCTGGGGATTTAACACAAATGGAGTATCTGTTTAGGCTAATGGGGTCAGAGCGGATCAAACCAAGCTGTGTCACACTTTGCTCACTCGTAAGGGCTTATGGGAAAGCAGGTAAACCTGAAAAAATTAGTGGTGTTTTACGTTTTGTGGAGAATTCAGACGTGATATTGGATACTGTGTTTTTCAATTGTCTGGTTGATGCTTATGGGAGGCTGGGATGCTTCACAGAAATGAAGGGGGTGCTTGAGATAATGAAGCAAAAAGGATGTTCTCCTGATAAGATCACATATAGAACCATGATTAAAGCTTATTCATTCAACAATATGACTGGCCATGTGAAGGAACTCCATGAACTTATGCAATCGGCAGGAAGTCAGATGACTTGGTCACAGAGACAAAAACCTGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

505

Amino Acids

57.12

Weight (kDa)

9.1

Isoelectric Point (pI)

37.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	143 - 190	7.9e-07	PPR repeat family
PPR_2	PF13041	182 - 226	5.2e-12	PPR repeat family
PPR	PF01535	182 - 207	2.5e-06	PPR repeat
PPR_3	PF13812	202 - 263	2.5e-09	Pentatricopeptide repeat domain
PPR_long	PF17177	230 - 362	2.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	238 - 298	4.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	249 - 297	4.2e-08	PPR repeat family
PPR_3	PF13812	278 - 334	1.1e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	285 - 333	3.4e-08	PPR repeat family
PPR_3	PF13812	310 - 368	4.4e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	357 - 403	3.3e-07	PPR repeat family
TPR_24	PF23276	403 - 474	1.9e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	426 - 472	7.1e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001526)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48730
fragaria_vesca	FvH4_5g33190
malus_domestica	MD10G1163400.v1.1
prunus_persica	Prupe.8G201700_v2.0.a1 Prupe.8G201700_v2.0.a1 Prupe.8G201700_v2.0.a1
pyrus_communis	pycom10g14080
rosa_chinensis	RchiOBHm_Chr1g0373361 RchiOBHm_Chr7g0231531
rosa_laevigata	RLG00000001413 RLG00000008268
rosa_multiflora	Rmu_sc0001565.1_g000030 Rmu_sc0003505.1_g000027 Rmu_sc0005399.1_g000019 Rmu_sc0011314.1_g000012 Rmu_sc0012399.1_g000004 Rmu_sc0013558.1_g000012 Rmu_sc0028716.1_g000001
rosa_roxburghii	Rroxscaffold_1G00016380 Rroxscaffold_1G00029710 Rroxscaffold_3G00229090
rosa_rugosa	Rorug07G0267100 Rorug07G0267100
rosa_samantha	Rh1AG365000 Rh1CG099500 Rh2AG510800 Rh2BG430100 Rh2BG476000 Rh2CG061700 Rh2CG496000 Rh2DG388600 Rh2DG440000 Rh2DG484700 Rh4BG006500 Rh4DG135300 Rh5AG195600 Rh5AG195700 Rh5CG115300 Rh6AG146300 Rh7AG421500 Rh7BG396200 Rh7CG441800 Rh7DG259000 Rh7DG414200
rosa_wichuraiana	Rw0G012110 Rw6G012720 Rw6G032340 Rw6G045030 Rw7G034780 Rw7G034910 Rw7G034940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1014
Acc36I	ACCTGC	2 cut(s)	673, 1205
Acc65I	GGTACC	1 cut(s)	420
AccB1I	GGYRCC	1 cut(s)	420
AccBSI	CCGCTC	1 cut(s)	1159
AccI	GTMKAC	1 cut(s)	815
AciI	CCGC	3 cut(s)	75, 268, 1159
AclWI	GGATC	1 cut(s)	1169
AcoI	YGGCCR	2 cut(s)	63, 1435
AcsI	RAATTY	4 cut(s)	729, 797, 871, 1258
AcuI	CTGAAG	1 cut(s)	164
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	1 cut(s)	422
AfiI	CCNNNNNNNGG	4 cut(s)	55, 434, 573, 1444
AgsI	TTSAA	6 cut(s)	398, 506, 590, 976, 1291, 1423
AhlI	ACTAGT	1 cut(s)	125
AjiI	CACGTC	1 cut(s)	1267
AjnI	CCWGG	2 cut(s)	326, 433
Alw21I	GWGCWC	2 cut(s)	20, 339
Alw26I	GTCTC	4 cut(s)	215, 310, 587, 1492
AlwI	GGATC	1 cut(s)	1169
AlwNI	CAGNNNCTG	1 cut(s)	712
AoxI	GGCC	5 cut(s)	3, 63, 201, 425, 1435
ApeKI	GCWGC	3 cut(s)	403, 412, 894
ApoI	RAATTY	4 cut(s)	729, 797, 871, 1258
Asp718I	GGTACC	1 cut(s)	420
AspS9I	GGNCC	3 cut(s)	53, 426, 864
AsuHPI	GGTGA	1 cut(s)	1099
AvaII	GGWCC	2 cut(s)	53, 864
BaeGI	GKGCMC	1 cut(s)	91
BalI	TGGCCA	1 cut(s)	1437
BanI	GGYRCC	1 cut(s)	420
BanII	GRGCYC	1 cut(s)	20
Bbv12I	GWGCWC	2 cut(s)	20, 339
BbvCI	CCTCAGC	1 cut(s)	492
BbvI	GCAGC	3 cut(s)	390, 424, 906
BccI	CCATC	5 cut(s)	111, 366, 761, 802, 1027
BciT130I	CCWGG	2 cut(s)	328, 435
BciVI	GTATCC	1 cut(s)	1270
BcoDI	GTCTC	4 cut(s)	215, 310, 587, 1492
BcuI	ACTAGT	1 cut(s)	125
BfaI	CTAG	4 cut(s)	126, 144, 149, 464
BfmI	CTRYAG	1 cut(s)	680
BfuAI	ACCTGC	2 cut(s)	673, 1205
BfuI	GTATCC	1 cut(s)	1270
BisI	GCNGC	3 cut(s)	404, 413, 895
BlpI	GCTNAGC	1 cut(s)	833
BlsI	GCNGC	3 cut(s)	405, 414, 896
Bme1390I	CCNGG	2 cut(s)	328, 435
Bme18I	GGWCC	2 cut(s)	53, 864
BmgBI	CACGTC	1 cut(s)	1267
BmgT120I	GGNCC	3 cut(s)	53, 426, 864
BmiI	GGNNCC	3 cut(s)	60, 310, 422
BmrFI	CCNGG	2 cut(s)	328, 435
BmsI	GCATC	3 cut(s)	766, 1294, 1313
Bpu10I	CCTNAGC	1 cut(s)	492
Bpu1102I	GCTNAGC	1 cut(s)	833
BpuEI	CTTGAG	4 cut(s)	34, 371, 629, 1370
Bsa29I	ATCGAT	1 cut(s)	774
BsaHI	GRCGYC	1 cut(s)	98
BsaI	GGTCTC	1 cut(s)	215
BsaJI	CCNNGG	3 cut(s)	49, 204, 326
BsaXI	ACNNNNNCTCC	2 cut(s)	1121, 1151
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 434, 573, 1444
Bse118I	RCCGGY	3 cut(s)	37, 55, 423
Bse1I	ACTGG	1 cut(s)	1438
Bse3DI	GCAATG	1 cut(s)	834
BseBI	CCWGG	2 cut(s)	328, 435
BseCI	ATCGAT	1 cut(s)	774
BseDI	CCNNGG	3 cut(s)	49, 204, 326
BseGI	GGATG	3 cut(s)	103, 1328, 1376
BseLI	CCNNNNNNNGG	4 cut(s)	55, 434, 573, 1444
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	1 cut(s)	483
BseNI	ACTGG	1 cut(s)	1438
BseRI	GAGGAG	3 cut(s)	233, 509, 974
BseSI	GKGCMC	1 cut(s)	91
BseXI	GCAGC	3 cut(s)	390, 424, 906
BseYI	CCCAGC	3 cut(s)	1004, 1109, 1318
BsgI	GTGCAG	2 cut(s)	150, 725
Bsh1285I	CGRYCG	1 cut(s)	261
BshFI	GGCC	5 cut(s)	5, 65, 203, 427, 1437
BshNI	GGYRCC	1 cut(s)	420
BshVI	ATCGAT	1 cut(s)	774
BsiEI	CGRYCG	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	20, 339
BsiSI	CCGG	5 cut(s)	38, 56, 62, 424, 948
BslI	CCNNNNNNNGG	4 cut(s)	55, 434, 573, 1444
BsmAI	GTCTC	4 cut(s)	215, 310, 587, 1492
BsnI	GGCC	5 cut(s)	5, 65, 203, 427, 1437
Bso31I	GGTCTC	1 cut(s)	215
Bsp1286I	GDGCHC	3 cut(s)	20, 91, 339
Bsp143I	GATC	3 cut(s)	771, 1161, 1386
Bsp1720I	GCTNAGC	1 cut(s)	833
BspACI	CCGC	3 cut(s)	75, 268, 1159
BspANI	GGCC	5 cut(s)	5, 65, 203, 427, 1437
BspCNI	CTCAG	1 cut(s)	484
BspDI	ATCGAT	1 cut(s)	774
BspHI	TCATGA	1 cut(s)	966
BspLI	GGNNCC	3 cut(s)	60, 310, 422
BspMAI	CTGCAG	1 cut(s)	684
BspMI	ACCTGC	2 cut(s)	673, 1205
BspPI	GGATC	1 cut(s)	1169
BspT107I	GGYRCC	1 cut(s)	420
BspTNI	GGTCTC	1 cut(s)	215
BsrBI	CCGCTC	1 cut(s)	1159
BsrDI	GCAATG	1 cut(s)	834
BsrFI	RCCGGY	3 cut(s)	37, 55, 423
BsrI	ACTGG	1 cut(s)	1438
BssAI	RCCGGY	3 cut(s)	37, 55, 423
BssECI	CCNNGG	3 cut(s)	49, 204, 326
BssMI	GATC	3 cut(s)	771, 1161, 1386
BssNI	GRCGYC	1 cut(s)	98
BssT1I	CCWWGG	1 cut(s)	204
Bst2UI	CCWGG	2 cut(s)	328, 435
Bst4CI	ACNGT	3 cut(s)	334, 944, 1282
BstACI	GRCGYC	1 cut(s)	98
BstAPI	GCANNNNNTGC	1 cut(s)	712
BstC8I	GCNNGC	3 cut(s)	638, 680, 708
BstDEI	CTNAG	2 cut(s)	492, 833
BstENI	CCTNNNNNAGG	1 cut(s)	571
BstF5I	GGATG	3 cut(s)	103, 1328, 1376
BstKTI	GATC	3 cut(s)	774, 1164, 1389
BstMAI	GTCTC	4 cut(s)	215, 310, 587, 1492
BstMBI	GATC	3 cut(s)	771, 1161, 1386
BstMCI	CGRYCG	1 cut(s)	261
BstMWI	GCNNNNNNNGC	5 cut(s)	149, 184, 409, 412, 712
BstNI	CCWGG	2 cut(s)	328, 435
BstNSI	RCATGY	1 cut(s)	1045
BstSCI	CCNGG	2 cut(s)	326, 433
BstSFI	CTRYAG	1 cut(s)	680
BstSLI	GKGCMC	1 cut(s)	91
BstV1I	GCAGC	3 cut(s)	390, 424, 906
Bsu15I	ATCGAT	1 cut(s)	774
BsuI	GTATCC	1 cut(s)	1270
BsuRI	GGCC	5 cut(s)	5, 65, 203, 427, 1437
BsuTUI	ATCGAT	1 cut(s)	774
BtgZI	GCGATG	1 cut(s)	385
BtrI	CACGTC	1 cut(s)	1267
BtsCI	GGATG	3 cut(s)	103, 1328, 1376
BtsI	GCAGTG	2 cut(s)	360, 904
BtsIMutI	CAGTG	3 cut(s)	360, 904, 949
BveI	ACCTGC	2 cut(s)	673, 1205
Cac8I	GCNNGC	3 cut(s)	638, 680, 708
CaiI	CAGNNNCTG	1 cut(s)	712
CciI	TCATGA	1 cut(s)	966
Cfr10I	RCCGGY	3 cut(s)	37, 55, 423
Cfr13I	GGNCC	3 cut(s)	53, 426, 864
ClaI	ATCGAT	1 cut(s)	774
CseI	GACGC	2 cut(s)	106, 1103
Csp6I	GTAC	1 cut(s)	421
CviQI	GTAC	1 cut(s)	421
DdeI	CTNAG	2 cut(s)	492, 833
DpnI	GATC	3 cut(s)	773, 1163, 1388
DpnII	GATC	3 cut(s)	771, 1161, 1386
EaeI	YGGCCR	2 cut(s)	63, 1435
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	204
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	215
Eco47I	GGWCC	2 cut(s)	53, 864
Eco53kI	GAGCTC	1 cut(s)	18
Eco57I	CTGAAG	1 cut(s)	164
EcoICRI	GAGCTC	1 cut(s)	18
EcoNI	CCTNNNNNAGG	1 cut(s)	571
EcoRI	GAATTC	2 cut(s)	871, 1258
EcoRII	CCWGG	2 cut(s)	326, 433
EcoT14I	CCWWGG	1 cut(s)	204
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	1 cut(s)	204
FauI	CCCGC	1 cut(s)	82
FauNDI	CATATG	2 cut(s)	694, 994
FblI	GTMKAC	1 cut(s)	815
Fnu4HI	GCNGC	3 cut(s)	404, 413, 895
FokI	GGATG	3 cut(s)	90, 1335, 1383
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	3 cut(s)	404, 413, 895
FspBI	CTAG	4 cut(s)	126, 144, 149, 464
GluI	GCNGC	3 cut(s)	404, 413, 895
GsaI	CCCAGC	3 cut(s)	1008, 1113, 1322
HaeIII	GGCC	5 cut(s)	5, 65, 203, 427, 1437
HapII	CCGG	5 cut(s)	38, 56, 62, 424, 948
HgaI	GACGC	2 cut(s)	106, 1103
Hin1I	GRCGYC	1 cut(s)	98
HincII	GTYRAC	1 cut(s)	816
HindII	GTYRAC	1 cut(s)	816
HindIII	AAGCTT	1 cut(s)	1410
HinfI	GANTC	6 cut(s)	357, 377, 542, 812, 951, 989
HpaII	CCGG	5 cut(s)	38, 56, 62, 424, 948
HphI	GGTGA	1 cut(s)	1099
Hpy166II	GTNNAC	4 cut(s)	442, 476, 816, 1220
Hpy188I	TCNGA	6 cut(s)	183, 246, 721, 1156, 1264, 1482
Hpy188III	TCNNGA	6 cut(s)	13, 295, 629, 862, 967, 1379
Hpy8I	GTNNAC	4 cut(s)	442, 476, 816, 1220
Hpy99I	CGWCG	1 cut(s)	100
HpyAV	CCTTC	3 cut(s)	515, 1333, 1438
HpyCH4III	ACNGT	3 cut(s)	334, 944, 1282
HpyCH4IV	ACGT	2 cut(s)	1246, 1266
HpyCH4V	TGCA	8 cut(s)	131, 406, 682, 692, 706, 803, 1045, 1465
HpyF10VI	GCNNNNNNNGC	5 cut(s)	149, 184, 409, 412, 712
HpyF3I	CTNAG	2 cut(s)	492, 833
HpySE526I	ACGT	2 cut(s)	1246, 1266
Hsp92I	GRCGYC	1 cut(s)	98
KpnI	GGTACC	1 cut(s)	424
Kzo9I	GATC	3 cut(s)	771, 1161, 1386
LmnI	GCTCC	5 cut(s)	23, 64, 314, 496, 576
Lsp1109I	GCAGC	3 cut(s)	390, 424, 906
LweI	GCATC	3 cut(s)	766, 1294, 1313
MaeI	CTAG	4 cut(s)	126, 144, 149, 464
MaeII	ACGT	2 cut(s)	1246, 1266
MaeIII	GTNAC	4 cut(s)	154, 1072, 1177, 1491
MalI	GATC	3 cut(s)	773, 1163, 1388
MbiI	CCGCTC	1 cut(s)	1159
MboI	GATC	3 cut(s)	771, 1161, 1386
MboII	GAAGA	3 cut(s)	310, 313, 631
MfeI	CAATTG	1 cut(s)	1291
MhlI	GDGCHC	3 cut(s)	20, 91, 339
MlsI	TGGCCA	1 cut(s)	1437
MluCI	AATT	9 cut(s)	252, 453, 729, 797, 871, 1009, 1230, 1258, 1291
MluNI	TGGCCA	1 cut(s)	1437
MlyI	GAGTC	2 cut(s)	386, 821
MmeI	TCCRAC	1 cut(s)	979
Mox20I	TGGCCA	1 cut(s)	1437
MscI	TGGCCA	1 cut(s)	1437
MseI	TTAA	3 cut(s)	45, 1118, 1407
MslI	CAYNNNNRTG	1 cut(s)	1334
Msp20I	TGGCCA	1 cut(s)	1437
MspI	CCGG	5 cut(s)	38, 56, 62, 424, 948
MspR9I	CCNGG	2 cut(s)	328, 435
MunI	CAATTG	1 cut(s)	1291
MvaI	CCWGG	2 cut(s)	328, 435
MwoI	GCNNNNNNNGC	5 cut(s)	149, 184, 409, 412, 712
NdeI	CATATG	2 cut(s)	694, 994
NdeII	GATC	3 cut(s)	771, 1161, 1386
NlaIV	GGNNCC	3 cut(s)	60, 310, 422
NmuCI	GTSAC	2 cut(s)	1177, 1491
NspI	RCATGY	1 cut(s)	1045
PagI	TCATGA	1 cut(s)	966
PfeI	GAWTC	4 cut(s)	357, 542, 951, 989
PflFI	GACNNNGTC	1 cut(s)	1489
PkrI	GCNGC	3 cut(s)	405, 414, 896
PleI	GAGTC	2 cut(s)	385, 820
PpsI	GAGTC	2 cut(s)	385, 820
PsiI	TTATAA	1 cut(s)	1014
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	2 cut(s)	326, 433
PspFI	CCCAGC	3 cut(s)	1004, 1109, 1318
PspGI	CCWGG	2 cut(s)	326, 433
PspN4I	GGNNCC	3 cut(s)	60, 310, 422
PspPI	GGNCC	3 cut(s)	53, 426, 864
PstI	CTGCAG	1 cut(s)	684
PstNI	CAGNNNCTG	1 cut(s)	712
PsyI	GACNNNGTC	1 cut(s)	1489
RsaI	GTAC	1 cut(s)	422
RsaNI	GTAC	1 cut(s)	421
RseI	CAYNNNNRTG	1 cut(s)	1334
SacI	GAGCTC	1 cut(s)	20
SalI	GTCGAC	1 cut(s)	814
SaqAI	TTAA	3 cut(s)	45, 1118, 1407
SatI	GCNGC	3 cut(s)	404, 413, 895
Sau3AI	GATC	3 cut(s)	771, 1161, 1386
Sau96I	GGNCC	3 cut(s)	53, 426, 864
SbfI	CCTGCAGG	1 cut(s)	684
SchI	GAGTC	2 cut(s)	386, 821
ScrFI	CCNGG	2 cut(s)	328, 435
SdaI	CCTGCAGG	1 cut(s)	684
SduI	GDGCHC	3 cut(s)	20, 91, 339
SfaNI	GCATC	3 cut(s)	766, 1294, 1313
SfcI	CTRYAG	1 cut(s)	680
SgrAI	CRCCGGYG	1 cut(s)	37
SinI	GGWCC	2 cut(s)	53, 864
SmiMI	CAYNNNNRTG	1 cut(s)	1334
SmlI	CTYRAG	4 cut(s)	13, 386, 608, 1349
SmoI	CTYRAG	4 cut(s)	13, 386, 608, 1349
SpeI	ACTAGT	1 cut(s)	125
Sse8387I	CCTGCAGG	1 cut(s)	684
Sse9I	AATT	9 cut(s)	252, 453, 729, 797, 871, 1009, 1230, 1258, 1291
SsiI	CCGC	3 cut(s)	75, 268, 1159
SspMI	CTAG	4 cut(s)	126, 144, 149, 464
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	2 cut(s)	326, 433
StyI	CCWWGG	1 cut(s)	204
TaaI	ACNGT	3 cut(s)	334, 944, 1282
TaiI	ACGT	2 cut(s)	1249, 1269
TaqI	TCGA	5 cut(s)	294, 339, 774, 815, 987
TaqII	GACCGA	1 cut(s)	247
TasI	AATT	9 cut(s)	252, 453, 729, 797, 871, 1009, 1230, 1258, 1291
TfiI	GAWTC	4 cut(s)	357, 542, 951, 989
Tru1I	TTAA	3 cut(s)	45, 1118, 1407
Tru9I	TTAA	3 cut(s)	45, 1118, 1407
TscAI	CASTG	3 cut(s)	367, 904, 949
TseFI	GTSAC	2 cut(s)	1177, 1491
TseI	GCWGC	3 cut(s)	403, 412, 894
Tsp45I	GTSAC	2 cut(s)	1177, 1491
TspDTI	ATGAA	8 cut(s)	555, 632, 884, 981, 1352, 1373, 1407, 1470
TspGWI	ACGGA	1 cut(s)	865
TspRI	CASTG	3 cut(s)	367, 904, 949
Tth111I	GACNNNGTC	1 cut(s)	1489
VpaK11BI	GGWCC	2 cut(s)	53, 864
XagI	CCTNNNNNAGG	1 cut(s)	571
XapI	RAATTY	4 cut(s)	729, 797, 871, 1258
XceI	RCATGY	1 cut(s)	1045
XmiI	GTMKAC	1 cut(s)	815
XspI	CTAG	4 cut(s)	126, 144, 149, 464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.