Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001526

Physical Location & Seq

Genomic Coordinates Reverse (-)

51995550 .. 51998069

Gene Structure 2520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G034910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCCTCGCTCTTGAGCTCAGCTCAACCACTTCCACCGGCGTTTAACGGAGGACCGGCTCCGGCTACCAAACCGGCAACTCTTCGGGCACAGACGACGCCCCATCCTCAACCCACTAGTGCAGATAACAACGCCAGACTAAGGCTGAAAGATAAGGAGGCCAAGGACAGAAAGGAAGAGACCAACAACAAGTTAGCTTCTCGGAAAGCAATCTCGGTCGTTTTGCGGAGAGAAGCTACCAAATCCCACATCGAGAAGAAGAAAGGCTCCAAGAGACTGCTTCCCAGGACTGTGCTCGAAGCCCTCCATGAGAGAATCACTGCTCCGCGGTGGGAGTCTGCTCTCAAGGTTTTTGAACTGCTGCAAGAGCAGCTCTGGTACCGGCCCAATCCTGGTGTTTACAACAAGCTAATTGTCATGCTAGGAAAATGTAAACAACCAGAAAAAGCTGAGGAGCTTTTTCAAGCTATGATTGACGAAGGATGTGGTGTCAGCCATGAATCTTATACTGCTCTTATATCTGCCTATGGTAGGAGCAGTCTCTTTGACAAAGCATTTTCCCTCCTTGAGCAGATGAAGAATACTCCTGACTGCCAGCCTGATGTCCATACTTATTCTATCCTCATAAAATCTTGCCTGCAGGTTTTTGCATATGACAAAGTGCAGGCTCTGCTTTCAGATATGGAAATTCAGCACATTAGACCCAACACCATCACATACAATACCCTGATCGATGCTTACGGGAAATCTAAAAAATTTGCAGAGATGGAGTCGACACTTGAGGCAATGCTTAGCCAACAGGATTGTGAGCCTGATGTCTGGACCATGAATTCCGTAGTGAGAGCCTTTGGCAGCAGTGGGCAAATAGAAACAATGGAGAAATGTTTTGAGAAGTTCCACAGTGCCGGAATCCAACCAAACATCATGACTTTCAACATTCTCCTCGATTCGTATGGAAAAGCTCGGAATTATAAGAAAATGAGTGCTGTGATGGAATACATGCAGAAATACCATTACTCATGGACAATCGTTACATACAATGTGGTGATAGATGCATTTGGGAGGGCTGGGGATTTAACACAAATGGAGTATCTGTTTAGGTTAATGCAGTCAGAGCGGATCAAACCAAGCTGTGTCACACTTTGCTCACTCGTAAGGGCTTATGGGAAAGCAGGTAAACCTGAAAAAATTAGTGGTGTTTTACGTTTTGTGGAGAATTCAGACGTGATATTGGATACTGTGTTTTTCAATTGTCTGGTTGATGCTTATGGGAGGCTGGGATGCTTCACAGAAATGAAGGGGGTGCTTGAGATAATGAAGCAAAAAGGATGTTCTCCTGATAAGATCACATATAGAACCATGATTAAAGCTTATTCATTCAACAATATGACTGGCCATGTGAAGGAACTCCATGAACTTATGCAATCGGCAGGAAGTCAGATGACTTGGTCACAGAGACAAAAACCTGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

491

Amino Acids

55.66

Weight (kDa)

9.0

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	129 - 176	7.6e-07	PPR repeat family
PPR_2	PF13041	168 - 212	6.4e-12	PPR repeat family
PPR	PF01535	168 - 193	2.9e-06	PPR repeat
PPR_3	PF13812	224 - 284	7.9e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	235 - 283	5e-09	PPR repeat family
PPR_3	PF13812	265 - 320	1.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	271 - 319	3.3e-08	PPR repeat family
PPR_3	PF13812	296 - 354	7e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	343 - 389	5.9e-08	PPR repeat family
TPR_24	PF23276	389 - 460	2e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	412 - 458	6.9e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001526)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48730
fragaria_vesca	FvH4_5g33190
malus_domestica	MD10G1163400.v1.1
prunus_persica	Prupe.8G201700_v2.0.a1 Prupe.8G201700_v2.0.a1 Prupe.8G201700_v2.0.a1
pyrus_communis	pycom10g14080
rosa_chinensis	RchiOBHm_Chr1g0373361 RchiOBHm_Chr7g0231531
rosa_laevigata	RLG00000001413 RLG00000008268
rosa_multiflora	Rmu_sc0001565.1_g000030 Rmu_sc0003505.1_g000027 Rmu_sc0005399.1_g000019 Rmu_sc0011314.1_g000012 Rmu_sc0012399.1_g000004 Rmu_sc0013558.1_g000012 Rmu_sc0028716.1_g000001
rosa_roxburghii	Rroxscaffold_1G00016380 Rroxscaffold_1G00029710 Rroxscaffold_3G00229090
rosa_rugosa	Rorug07G0267100 Rorug07G0267100
rosa_samantha	Rh1AG365000 Rh1CG099500 Rh2AG510800 Rh2BG430100 Rh2BG476000 Rh2CG061700 Rh2CG496000 Rh2DG388600 Rh2DG440000 Rh2DG484700 Rh4BG006500 Rh4DG135300 Rh5AG195600 Rh5AG195700 Rh5CG115300 Rh6AG146300 Rh7AG421500 Rh7BG396200 Rh7CG441800 Rh7DG259000 Rh7DG414200
rosa_wichuraiana	Rw0G012110 Rw6G012720 Rw6G032340 Rw6G045030 Rw7G034780 Rw7G034910 Rw7G034940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	972
Acc36I	ACCTGC	2 cut(s)	631, 1163
Acc65I	GGTACC	1 cut(s)	378
AccB1I	GGYRCC	1 cut(s)	378
AccBSI	CCGCTC	1 cut(s)	1117
AccI	GTMKAC	1 cut(s)	773
AccII	CGCG	1 cut(s)	328
AciI	CCGC	4 cut(s)	226, 326, 328, 1117
AclWI	GGATC	1 cut(s)	1127
AcoI	YGGCCR	1 cut(s)	1393
AcsI	RAATTY	4 cut(s)	687, 755, 829, 1216
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	1 cut(s)	380
AfiI	CCNNNNNNNGG	4 cut(s)	141, 392, 531, 1402
AgsI	TTSAA	5 cut(s)	356, 464, 934, 1249, 1381
AhlI	ACTAGT	1 cut(s)	116
AjiI	CACGTC	1 cut(s)	1225
AjnI	CCWGG	2 cut(s)	284, 391
Alw21I	GWGCWC	2 cut(s)	20, 297
Alw26I	GTCTC	4 cut(s)	173, 268, 545, 1450
AlwI	GGATC	1 cut(s)	1127
AlwNI	CAGNNNCTG	1 cut(s)	670
AoxI	GGCC	4 cut(s)	3, 159, 383, 1393
ApeKI	GCWGC	3 cut(s)	361, 370, 852
ApoI	RAATTY	4 cut(s)	687, 755, 829, 1216
Asp718I	GGTACC	1 cut(s)	378
AspS9I	GGNCC	3 cut(s)	53, 384, 822
AsuHPI	GGTGA	1 cut(s)	1057
AvaII	GGWCC	2 cut(s)	53, 822
BaeGI	GKGCMC	1 cut(s)	91
BalI	TGGCCA	1 cut(s)	1395
BanI	GGYRCC	1 cut(s)	378
BanII	GRGCYC	1 cut(s)	20
Bbv12I	GWGCWC	2 cut(s)	20, 297
BbvCI	CCTCAGC	1 cut(s)	450
BbvI	GCAGC	3 cut(s)	348, 382, 864
BccI	CCATC	4 cut(s)	111, 719, 760, 985
BciT130I	CCWGG	2 cut(s)	286, 393
BciVI	GTATCC	1 cut(s)	1228
BcoDI	GTCTC	4 cut(s)	173, 268, 545, 1450
BcuI	ACTAGT	1 cut(s)	116
BfaI	CTAG	2 cut(s)	117, 422
BfmI	CTRYAG	1 cut(s)	638
BfuAI	ACCTGC	2 cut(s)	631, 1163
BfuI	GTATCC	1 cut(s)	1228
BisI	GCNGC	3 cut(s)	362, 371, 853
BlpI	GCTNAGC	2 cut(s)	19, 791
BlsI	GCNGC	3 cut(s)	363, 372, 854
Bme1390I	CCNGG	2 cut(s)	286, 393
Bme18I	GGWCC	2 cut(s)	53, 822
BmgBI	CACGTC	1 cut(s)	1225
BmgT120I	GGNCC	3 cut(s)	53, 384, 822
BmiI	GGNNCC	3 cut(s)	60, 268, 380
BmrFI	CCNGG	2 cut(s)	286, 393
BmsI	GCATC	4 cut(s)	724, 1042, 1252, 1271
BplI	GAGNNNNNCTC	2 cut(s)	7, 39
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu1102I	GCTNAGC	2 cut(s)	19, 791
BpuEI	CTTGAG	5 cut(s)	34, 329, 587, 800, 1328
Bsa29I	ATCGAT	1 cut(s)	732
BsaHI	GRCGYC	1 cut(s)	98
BsaI	GGTCTC	1 cut(s)	173
BsaJI	CCNNGG	3 cut(s)	162, 284, 326
BsaXI	ACNNNNNCTCC	2 cut(s)	1079, 1109
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 392, 531, 1402
Bse118I	RCCGGY	4 cut(s)	37, 55, 73, 381
Bse1I	ACTGG	1 cut(s)	1396
Bse3DI	GCAATG	1 cut(s)	792
BseBI	CCWGG	2 cut(s)	286, 393
BseCI	ATCGAT	1 cut(s)	732
BseDI	CCNNGG	3 cut(s)	162, 284, 326
BseGI	GGATG	4 cut(s)	103, 488, 1286, 1334
BseLI	CCNNNNNNNGG	4 cut(s)	141, 392, 531, 1402
BseMI	GCAATG	1 cut(s)	792
BseMII	CTCAG	2 cut(s)	33, 441
BseNI	ACTGG	1 cut(s)	1396
BseRI	GAGGAG	2 cut(s)	467, 932
BseSI	GKGCMC	1 cut(s)	91
BseXI	GCAGC	3 cut(s)	348, 382, 864
BseYI	CCCAGC	2 cut(s)	1067, 1276
BsgI	GTGCAG	2 cut(s)	141, 683
Bsh1236I	CGCG	1 cut(s)	328
Bsh1285I	CGRYCG	1 cut(s)	219
BshFI	GGCC	4 cut(s)	5, 161, 385, 1395
BshNI	GGYRCC	1 cut(s)	378
BshVI	ATCGAT	1 cut(s)	732
BsiEI	CGRYCG	1 cut(s)	219
BsiHKAI	GWGCWC	2 cut(s)	20, 297
BsiSI	CCGG	6 cut(s)	38, 56, 62, 74, 382, 906
BslI	CCNNNNNNNGG	4 cut(s)	141, 392, 531, 1402
BsmAI	GTCTC	4 cut(s)	173, 268, 545, 1450
BsnI	GGCC	4 cut(s)	5, 161, 385, 1395
Bso31I	GGTCTC	1 cut(s)	173
Bsp1286I	GDGCHC	3 cut(s)	20, 91, 297
Bsp143I	GATC	3 cut(s)	729, 1119, 1344
Bsp1720I	GCTNAGC	2 cut(s)	19, 791
BspACI	CCGC	4 cut(s)	226, 326, 328, 1117
BspANI	GGCC	4 cut(s)	5, 161, 385, 1395
BspCNI	CTCAG	2 cut(s)	32, 442
BspDI	ATCGAT	1 cut(s)	732
BspFNI	CGCG	1 cut(s)	328
BspHI	TCATGA	1 cut(s)	924
BspLI	GGNNCC	3 cut(s)	60, 268, 380
BspMAI	CTGCAG	1 cut(s)	642
BspMI	ACCTGC	2 cut(s)	631, 1163
BspPI	GGATC	1 cut(s)	1127
BspT107I	GGYRCC	1 cut(s)	378
BspTNI	GGTCTC	1 cut(s)	173
BsrBI	CCGCTC	1 cut(s)	1117
BsrDI	GCAATG	1 cut(s)	792
BsrFI	RCCGGY	4 cut(s)	37, 55, 73, 381
BsrI	ACTGG	1 cut(s)	1396
BssAI	RCCGGY	4 cut(s)	37, 55, 73, 381
BssECI	CCNNGG	3 cut(s)	162, 284, 326
BssMI	GATC	3 cut(s)	729, 1119, 1344
BssNI	GRCGYC	1 cut(s)	98
BssT1I	CCWWGG	1 cut(s)	162
Bst2UI	CCWGG	2 cut(s)	286, 393
Bst4CI	ACNGT	3 cut(s)	292, 902, 1240
Bst6I	CTCTTC	2 cut(s)	87, 171
BstACI	GRCGYC	1 cut(s)	98
BstAPI	GCANNNNNTGC	1 cut(s)	670
BstC8I	GCNNGC	3 cut(s)	596, 638, 666
BstDEI	CTNAG	4 cut(s)	19, 140, 450, 791
BstDSI	CCRYGG	1 cut(s)	326
BstENI	CCTNNNNNAGG	1 cut(s)	529
BstF5I	GGATG	4 cut(s)	103, 488, 1286, 1334
BstFNI	CGCG	1 cut(s)	328
BstKTI	GATC	3 cut(s)	732, 1122, 1347
BstMAI	GTCTC	4 cut(s)	173, 268, 545, 1450
BstMBI	GATC	3 cut(s)	729, 1119, 1344
BstMCI	CGRYCG	1 cut(s)	219
BstMWI	GCNNNNNNNGC	4 cut(s)	367, 370, 670, 1114
BstNI	CCWGG	2 cut(s)	286, 393
BstNSI	RCATGY	1 cut(s)	1003
BstSCI	CCNGG	2 cut(s)	284, 391
BstSFI	CTRYAG	1 cut(s)	638
BstSLI	GKGCMC	1 cut(s)	91
BstUI	CGCG	1 cut(s)	328
BstV1I	GCAGC	3 cut(s)	348, 382, 864
Bsu15I	ATCGAT	1 cut(s)	732
BsuI	GTATCC	1 cut(s)	1228
BsuRI	GGCC	4 cut(s)	5, 161, 385, 1395
BsuTUI	ATCGAT	1 cut(s)	732
BtgI	CCRYGG	1 cut(s)	326
BtrI	CACGTC	1 cut(s)	1225
BtsCI	GGATG	4 cut(s)	103, 488, 1286, 1334
BtsI	GCAGTG	2 cut(s)	318, 862
BtsIMutI	CAGTG	3 cut(s)	318, 862, 907
BveI	ACCTGC	2 cut(s)	631, 1163
Cac8I	GCNNGC	3 cut(s)	596, 638, 666
CaiI	CAGNNNCTG	1 cut(s)	670
CciI	TCATGA	1 cut(s)	924
Cfr10I	RCCGGY	4 cut(s)	37, 55, 73, 381
Cfr13I	GGNCC	3 cut(s)	53, 384, 822
Cfr42I	CCGCGG	1 cut(s)	329
ClaI	ATCGAT	1 cut(s)	732
CseI	GACGC	1 cut(s)	106
Csp6I	GTAC	1 cut(s)	379
CviQI	GTAC	1 cut(s)	379
DdeI	CTNAG	4 cut(s)	19, 140, 450, 791
DpnI	GATC	3 cut(s)	731, 1121, 1346
DpnII	GATC	3 cut(s)	729, 1119, 1344
EaeI	YGGCCR	1 cut(s)	1393
Eam1104I	CTCTTC	2 cut(s)	87, 171
EarI	CTCTTC	2 cut(s)	87, 171
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	162
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	173
Eco47I	GGWCC	2 cut(s)	53, 822
Eco53kI	GAGCTC	1 cut(s)	18
EcoICRI	GAGCTC	1 cut(s)	18
EcoNI	CCTNNNNNAGG	1 cut(s)	529
EcoRI	GAATTC	2 cut(s)	829, 1216
EcoRII	CCWGG	2 cut(s)	284, 391
EcoT14I	CCWWGG	1 cut(s)	162
EcoT22I	ATGCAT	1 cut(s)	1057
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	1 cut(s)	162
FauNDI	CATATG	1 cut(s)	652
FblI	GTMKAC	1 cut(s)	773
Fnu4HI	GCNGC	3 cut(s)	362, 371, 853
FokI	GGATG	4 cut(s)	90, 495, 1293, 1341
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	3 cut(s)	362, 371, 853
FspBI	CTAG	2 cut(s)	117, 422
GluI	GCNGC	3 cut(s)	362, 371, 853
GsaI	CCCAGC	2 cut(s)	1071, 1280
HaeIII	GGCC	4 cut(s)	5, 161, 385, 1395
HapII	CCGG	6 cut(s)	38, 56, 62, 74, 382, 906
HgaI	GACGC	1 cut(s)	106
Hin1I	GRCGYC	1 cut(s)	98
HincII	GTYRAC	1 cut(s)	774
HindII	GTYRAC	1 cut(s)	774
HindIII	AAGCTT	1 cut(s)	1368
HinfI	GANTC	6 cut(s)	315, 335, 500, 770, 909, 947
HpaII	CCGG	6 cut(s)	38, 56, 62, 74, 382, 906
HphI	GGTGA	1 cut(s)	1057
Hpy166II	GTNNAC	4 cut(s)	400, 434, 774, 1178
Hpy188I	TCNGA	6 cut(s)	204, 679, 966, 1114, 1222, 1440
Hpy188III	TCNNGA	6 cut(s)	13, 253, 587, 820, 925, 1337
Hpy8I	GTNNAC	4 cut(s)	400, 434, 774, 1178
Hpy99I	CGWCG	1 cut(s)	100
HpyAV	CCTTC	3 cut(s)	473, 1291, 1396
HpyCH4III	ACNGT	3 cut(s)	292, 902, 1240
HpyCH4IV	ACGT	2 cut(s)	1204, 1224
HpyF10VI	GCNNNNNNNGC	4 cut(s)	367, 370, 670, 1114
HpyF3I	CTNAG	4 cut(s)	19, 140, 450, 791
HpySE526I	ACGT	2 cut(s)	1204, 1224
Hsp92I	GRCGYC	1 cut(s)	98
KpnI	GGTACC	1 cut(s)	382
KspI	CCGCGG	1 cut(s)	329
Kzo9I	GATC	3 cut(s)	729, 1119, 1344
LmnI	GCTCC	5 cut(s)	64, 272, 328, 454, 534
Lsp1109I	GCAGC	3 cut(s)	348, 382, 864
LweI	GCATC	4 cut(s)	724, 1042, 1252, 1271
MaeI	CTAG	2 cut(s)	117, 422
MaeII	ACGT	2 cut(s)	1204, 1224
MaeIII	GTNAC	3 cut(s)	1030, 1135, 1449
MalI	GATC	3 cut(s)	731, 1121, 1346
MbiI	CCGCTC	1 cut(s)	1117
MboI	GATC	3 cut(s)	729, 1119, 1344
MboII	GAAGA	5 cut(s)	74, 188, 268, 271, 589
MfeI	CAATTG	1 cut(s)	1249
MhlI	GDGCHC	3 cut(s)	20, 91, 297
MlsI	TGGCCA	1 cut(s)	1395
MluCI	AATT	8 cut(s)	411, 687, 755, 829, 967, 1188, 1216, 1249
MluNI	TGGCCA	1 cut(s)	1395
MlyI	GAGTC	2 cut(s)	344, 779
MmeI	TCCRAC	1 cut(s)	937
Mox20I	TGGCCA	1 cut(s)	1395
Mph1103I	ATGCAT	1 cut(s)	1057
MscI	TGGCCA	1 cut(s)	1395
MseI	TTAA	4 cut(s)	45, 1076, 1103, 1365
MslI	CAYNNNNRTG	1 cut(s)	1292
Msp20I	TGGCCA	1 cut(s)	1395
MspA1I	CMGCKG	1 cut(s)	328
MspI	CCGG	6 cut(s)	38, 56, 62, 74, 382, 906
MspR9I	CCNGG	2 cut(s)	286, 393
MunI	CAATTG	1 cut(s)	1249
MvaI	CCWGG	2 cut(s)	286, 393
MvnI	CGCG	1 cut(s)	328
MwoI	GCNNNNNNNGC	4 cut(s)	367, 370, 670, 1114
NdeI	CATATG	1 cut(s)	652
NdeII	GATC	3 cut(s)	729, 1119, 1344
NlaIV	GGNNCC	3 cut(s)	60, 268, 380
NmuCI	GTSAC	2 cut(s)	1135, 1449
NsiI	ATGCAT	1 cut(s)	1057
NspI	RCATGY	1 cut(s)	1003
PagI	TCATGA	1 cut(s)	924
PfeI	GAWTC	4 cut(s)	315, 500, 909, 947
PflFI	GACNNNGTC	1 cut(s)	1447
PkrI	GCNGC	3 cut(s)	363, 372, 854
PleI	GAGTC	2 cut(s)	343, 778
PpsI	GAGTC	2 cut(s)	343, 778
PsiI	TTATAA	1 cut(s)	972
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	2 cut(s)	284, 391
PspFI	CCCAGC	2 cut(s)	1067, 1276
PspGI	CCWGG	2 cut(s)	284, 391
PspN4I	GGNNCC	3 cut(s)	60, 268, 380
PspPI	GGNCC	3 cut(s)	53, 384, 822
PstI	CTGCAG	1 cut(s)	642
PstNI	CAGNNNCTG	1 cut(s)	670
PsyI	GACNNNGTC	1 cut(s)	1447
RsaI	GTAC	1 cut(s)	380
RsaNI	GTAC	1 cut(s)	379
RseI	CAYNNNNRTG	1 cut(s)	1292
SacI	GAGCTC	1 cut(s)	20
SacII	CCGCGG	1 cut(s)	329
SalI	GTCGAC	1 cut(s)	772
SaqAI	TTAA	4 cut(s)	45, 1076, 1103, 1365
SatI	GCNGC	3 cut(s)	362, 371, 853
Sau3AI	GATC	3 cut(s)	729, 1119, 1344
Sau96I	GGNCC	3 cut(s)	53, 384, 822
SbfI	CCTGCAGG	1 cut(s)	642
SchI	GAGTC	2 cut(s)	344, 779
ScrFI	CCNGG	2 cut(s)	286, 393
SdaI	CCTGCAGG	1 cut(s)	642
SduI	GDGCHC	3 cut(s)	20, 91, 297
SfaNI	GCATC	4 cut(s)	724, 1042, 1252, 1271
SfcI	CTRYAG	1 cut(s)	638
Sfr303I	CCGCGG	1 cut(s)	329
SgrAI	CRCCGGYG	1 cut(s)	37
SgrBI	CCGCGG	1 cut(s)	329
SinI	GGWCC	2 cut(s)	53, 822
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SmlI	CTYRAG	5 cut(s)	13, 344, 566, 779, 1307
SmoI	CTYRAG	5 cut(s)	13, 344, 566, 779, 1307
SpeI	ACTAGT	1 cut(s)	116
Sse8387I	CCTGCAGG	1 cut(s)	642
Sse9I	AATT	8 cut(s)	411, 687, 755, 829, 967, 1188, 1216, 1249
SsiI	CCGC	4 cut(s)	226, 326, 328, 1117
SspMI	CTAG	2 cut(s)	117, 422
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	2 cut(s)	284, 391
StyI	CCWWGG	1 cut(s)	162
TaaI	ACNGT	3 cut(s)	292, 902, 1240
TaiI	ACGT	2 cut(s)	1207, 1227
TaqI	TCGA	5 cut(s)	252, 297, 732, 773, 945
TaqII	GACCGA	1 cut(s)	205
TasI	AATT	8 cut(s)	411, 687, 755, 829, 967, 1188, 1216, 1249
TfiI	GAWTC	4 cut(s)	315, 500, 909, 947
Tru1I	TTAA	4 cut(s)	45, 1076, 1103, 1365
Tru9I	TTAA	4 cut(s)	45, 1076, 1103, 1365
TscAI	CASTG	3 cut(s)	325, 862, 907
TseFI	GTSAC	2 cut(s)	1135, 1449
TseI	GCWGC	3 cut(s)	361, 370, 852
Tsp45I	GTSAC	2 cut(s)	1135, 1449
TspDTI	ATGAA	7 cut(s)	513, 590, 842, 1310, 1331, 1365, 1428
TspGWI	ACGGA	2 cut(s)	63, 823
TspRI	CASTG	3 cut(s)	325, 862, 907
Tth111I	GACNNNGTC	1 cut(s)	1447
VpaK11BI	GGWCC	2 cut(s)	53, 822
XagI	CCTNNNNNAGG	1 cut(s)	529
XapI	RAATTY	4 cut(s)	687, 755, 829, 1216
XceI	RCATGY	1 cut(s)	1003
XmiI	GTMKAC	1 cut(s)	773
XspI	CTAG	2 cut(s)	117, 422
Zsp2I	ATGCAT	1 cut(s)	1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.