Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002164

Physical Location & Seq

Genomic Coordinates Forward (+)

19945869 .. 19951562

Gene Structure 5694 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G53440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGGGTTTCTTTTTCTCGACCCGGAAAGGTCTTCTTCTCATCATCTTCATTTGCTTGGATATTTTCGGATCAAATGCTCAACTTTTGCCAGAAGATGAAGTTCAAACATTGCGAACGATCTTTAGAAAGCTTCAAAACCAAACAGTGAACATCGAAAGAACTTCTTGTTTGGACAGAAAATGGAACTTTGTTGCCGAGTCAACCTCCAAGCTACCAACCAGTAACATTACCTGCGACTGTACTTTCAACGCCAGCTCAGTCTGTCGTGTCACAAACATACAGCTTAGAGGTTTCAATTTGCGAGGAATTATACCGCCTGAATTCGGGAACCTCACACGTCTTACAGAGATAGATCTTGTGCTGAACTTTCTCAGTGGAACAATACCTACAACATTGTCTCAAATTCCGCTTGAAATCTTGGCTGTAACCGGAAACCGACTCTCTGGACCATTTCCTCCTCAGCTCGGACAGATTACTACACTTACTGATGTGATTATGGAAAGTAATTTATTCACAGGACAACTTCCTCCAAACCTAGGGAACTTAAGAAGCTTGAAAAGATTGCTAATCTCTTCAAATAACATCACGGGTCGGATCCCTGAGTCCTTGAGCAATCTCAAGAATTTGACTAATTTTCGGATTGATGGAAACTCTCTATCTGGGAAGATACCTGATTTTATTGGAAACTGGACTCGGCTCGTTAGGCTAGACCTCCAAGGCACATCAATGGAAGGTCCTATTCCAGCTTCGATTTCAAACTTGAAAAACCTGACTGAATTGAGGATAACAGATTTGCGTGGACCAACTTCTCCTTTTCCAGACCTTCAAAATATGACGAATATGGAAAGATTGGTACTAAGAAACTGTTTGATAAGGGAACCTATACCGGAGTACATCGGTACTTCCATGACTATGTTGAAGTTACTAGATTTAAGCTCAAACATGTTAAATGGTACAATTCCAGACACATTTCGGAGTCTGAACGCATTCAACTTTATGTATCTGAATAATAACTCATTGACTGGTCCAGTTCCTCAGTTCATTCTTGATAGTAAACAAAACATAGATTTATCTTACAACAATTTCACTCAGCCACCTACTTTAAGCTGTAATCAGCTTGATGTTAACTTGATCTCCAGCTACCCCTCAGTAACCAATAACTCTGTCCAATGGTGCTTAAGAAAGGATCTTCCGTGTCCTGGAGACGCACACCATTCTTCCTTGTTCATTAACTGTGGAGGAAACCGACTCAAGGTTGATAAAGACGAGTATGCGGATGACTTAAACAAAAGAGGAGCATCAACATTCTCTTCTGTCTCTGAAAGATGGGGATACAGTAGTTCTGGAGCTTGGTTAGGCAATGACGGTGCCACTTACTTAGCAACAGATACGTTTAACTTGATCAATGAATCAACTCCAGAGTATTACAAAACAGCCCGTCTCGCTTCACAATCACTCAAGTACTATGGACTATGCATGAGAAGAGGAAGTTACAAAGTTCAGCTCTATTTTGCAGAGATAATGTTCTCAAATGATCAGACTTATAGTAGCTTAGGGCGGCGACTATTCGACATTTATGTTCAAGGGATTTTGTTGGAGAGGGACTTTAACATAGCACAGAGAGCAGGTGGAGTTGGTAAACCGTTCCTAAGGCAAGTTGATGAAGTTCAAGTGAATGGAAGTACGTTGGAGATTCATTTGAAGTGGACAGGAAAAGGCACAAACGTAATACCAACAAGAGGTGTTTACGGGCCTCTCATATCCGCTATAACCGTCACACCGAATTTCAAGGTTGATACCGGAAAACCATTGTCCAATGGAGTAGTTGCAGGCATTGTAATCGCAGCGTGTGTAGCTTTCGGGTTGCTGGTACTTGTAATCCTCAGGCTAACAGGTTACTTAGGTGGAAAAGAAGTGGATGAAAATGAAGAGCTTCGGGGACTCGATTTGCAGACAGGATCGTTCACATTGAAGCAAATCAAACGTGCTACTAACAACTTTGATCCAGAAAACAAGATTGGAGAAGGAGGATTTGGACCGGTTTATAAGGGTGTTCTCGCTGATGGGATGACCATAGCGGTGAAGCAGCTTTCATCGAAATCTAAGCAAGGAAACCGAGAATTTGTGACTGAGATCGGTATGATATCTGCGTTGCAACACCCTAATCTTGTGAAACTTTATGGTTGTTGCATCGAAGGGAAAGAGCTTTTGCTTGTGTATGAATACTTAGAGAACAACAGTCTCGCTCGCGCACTCTTTGGCACAGAGAAACAAAGACTTCACTTGGATTGGTCCACGAGGAACAAGGTATGCATAGGGATTGCGAAAGGATTGGCTTATCTACACGAGGAATCAAGGCTGAAGATTGTGCACAGAGACATTAAAGCGACAAATGTGCTTCTTGATCTGTCTCTAAATGCTAAGATCTCTGATTTTGGTCTAGCGAAACTCGATGAAGAAGAGAATACACATATCAGCACAAGGATTGCAGGAACAATAGGTTACATGGCTCCAGAGTATGCAATGAGAGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTCGGTGTAGTCTGTTTAGAGATTGTTAGCGGAAAGAGCAACACAAATTACAGACCAAAAGAAGAGTTTATTTACCTTCTTGACTGGGCATATGTCTTGCAAGAACAAGGGAGTCTTCTAGAACTCGTGGATCCAGATCTCGGTACAAGCTTTTCGAAGAAAGAAGCAATGAGGATGTTGAACATAGCTTTACTCTGTACAAACCCATCTCCAACATTGAGACCACCGATGTCATCTGTTGTAAGTATGCTACAAGGAAAAATCAAAGTCCAACCACCACTGGTGAAACGTGAAGCTGATCCAAGTGGTTCAGCCGCAATGAGGTTTAAGGCCTTAGAGCATTTGTCACAAGACAGCGAGTCACAAGTCTCAACCTATACAAGAAACAAAGAACACAAAAGCTCCTCCTCGATGGACGGTCCTTGGGTCGATTCTTCCTTCTCTGATCCGAGCAAAGATGTTAGCCTATTACAGCAAGAAGAAGGAAATTCATCATCTTCGTCGAGGAGACTGTTAGATGATCTTACTGATGTGGAGATTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1035

Amino Acids

114.85

Weight (kDa)

6.62

Isoelectric Point (pI)

37.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	173 - 262	7.3e-09	Leucine-rich repeat region
Malectin	PF11721	407 - 590	2.4e-42	Malectin domain
Pkinase	PF00069	669 - 870	2.6e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	670 - 937	6.6e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53430 AT1G53430 AT1G53440
fragaria_vesca	FvH4_3g17940
malus_domestica	MD03G1247100.v1.1 MD03G1248200.v1.1 MD03G1248300.v1.1 MD03G1249100.v1.1 MD03G1249200.v1.1 MD11G1267500.v1.1
prunus_persica	Prupe.4G158000_v2.0.a1 Prupe.4G158000_v2.0.a1
pyrus_communis	pycom03g19620 pycom03g19750 pycom06g03840 pycom11g23530
rosa_chinensis	RchiOBHm_Chr5g0029911 RchiOBHm_Chr5g0029981
rosa_laevigata	RLG00000033201 RLG00000033206
rosa_multiflora	Rmu_sc0003368.1_g000014 Rmu_sc0004542.1_g000020 Rmu_sc0021047.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050050
rosa_rugosa	Rorug05G0115300 Rorug05G0115400 Rorug05G0115500 Rorug05G0115600 Rorug05G0115700 Rorug05G0115800 Rorug05G0115900 Rorug05G0116000 Rorug05G0116100 Rorug05G0116200
rosa_samantha	Rh5AG208900 Rh5AG209100 Rh5BG207700 Rh5CG231100 Rh5CG231800 Rh5DG211900 Rh5DG212500
rosa_wichuraiana	Rw5G019010 Rw5G019050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2046
AarI	CACCTGC	1 cut(s)	1616
Acc36I	ACCTGC	2 cut(s)	239, 1616
AccB1I	GGYRCC	1 cut(s)	1367
AccII	CGCG	1 cut(s)	2250
AciI	CCGC	8 cut(s)	314, 407, 1274, 1558, 1764, 2078, 2592, 2877
AcsI	RAATTY	6 cut(s)	320, 402, 622, 1783, 2120, 3049
AcuI	CTGAAG	1 cut(s)	2381
AfiI	CCNNNNNNNGG	8 cut(s)	323, 464, 536, 1199, 1252, 1739, 2702, 2883
AflII	CTTAAG	2 cut(s)	544, 1177
AflIII	ACRYGT	2 cut(s)	335, 942
AgeI	ACCGGT	1 cut(s)	2038
AhdI	GACNNNNNGTC	1 cut(s)	2920
AjiI	CACGTC	1 cut(s)	338
AjnI	CCWGG	1 cut(s)	1198
AjuI	GAANNNNNNNTTGG	4 cut(s)	2001, 2016, 2033, 2048
Alw21I	GWGCWC	1 cut(s)	2373
Alw44I	GTGCAC	1 cut(s)	2369
AoxI	GGCC	2 cut(s)	1751, 2892
ApaLI	GTGCAC	1 cut(s)	2369
ApeKI	GCWGC	2 cut(s)	1844, 2086
ApoI	RAATTY	6 cut(s)	320, 402, 622, 1783, 2120, 3049
AsiGI	ACCGGT	1 cut(s)	2038
Asp700I	GAANNNNTTC	2 cut(s)	986, 1932
AspA2I	CCTAGG	1 cut(s)	535
AspLEI	GCGC	1 cut(s)	2252
AspS9I	GGNCC	8 cut(s)	446, 734, 800, 1025, 1751, 2036, 2292, 2981
AsuC2I	CCSGG	1 cut(s)	22
AsuHPI	GGTGA	2 cut(s)	2092, 2857
AsuII	TTCGAA	1 cut(s)	2717
AvaII	GGWCC	7 cut(s)	446, 734, 800, 1025, 2036, 2292, 2981
AvrII	CCTAGG	1 cut(s)	535
AxyI	CCTNAGG	2 cut(s)	1649, 1883
BaeGI	GKGCMC	1 cut(s)	2373
BaeI	ACNNNNGTAYC	2 cut(s)	1324, 1357
BamHI	GGATCC	2 cut(s)	594, 2692
BanI	GGYRCC	1 cut(s)	1367
BauI	CACGAG	3 cut(s)	2296, 2345, 2687
BbsI	GAAGAC	2 cut(s)	23, 2669
Bbv12I	GWGCWC	1 cut(s)	2373
BbvCI	CCTCAGC	1 cut(s)	459
BbvI	GCAGC	2 cut(s)	1856, 2098
BccI	CCATC	5 cut(s)	638, 1320, 2057, 2776, 2968
BcgI	CGANNNNNNTGC	4 cut(s)	1822, 1856, 2377, 2411
BciT130I	CCWGG	1 cut(s)	1200
BciVI	GTATCC	1 cut(s)	1325
BclI	TGATCA	2 cut(s)	1401, 1534
BcnI	CCSGG	1 cut(s)	22
BfaI	CTAG	5 cut(s)	536, 707, 926, 2441, 2681
BfrI	CTTAAG	2 cut(s)	544, 1177
BfuAI	ACCTGC	2 cut(s)	239, 1616
BfuI	GTATCC	1 cut(s)	1325
BglII	AGATCT	3 cut(s)	352, 2424, 2698
BisI	GCNGC	4 cut(s)	1559, 1845, 2087, 2877
BlnI	CCTAGG	1 cut(s)	535
BlsI	GCNGC	4 cut(s)	1560, 1846, 2088, 2878
BmcAI	AGTACT	1 cut(s)	1463
Bme1390I	CCNGG	2 cut(s)	22, 1200
Bme18I	GGWCC	7 cut(s)	446, 734, 800, 1025, 2036, 2292, 2981
BmeRI	GACNNNNNGTC	1 cut(s)	2920
BmgBI	CACGTC	1 cut(s)	338
BmgT120I	GGNCC	8 cut(s)	446, 734, 800, 1025, 1751, 2036, 2292, 2981
BmiI	GGNNCC	6 cut(s)	329, 596, 879, 1369, 2511, 2694
BmrFI	CCNGG	2 cut(s)	22, 1200
BmrI	ACTGGG	1 cut(s)	2656
BmsI	GCATC	2 cut(s)	1307, 2199
BmuI	ACTGGG	1 cut(s)	2656
BpiI	GAAGAC	2 cut(s)	23, 2669
BplI	GAGNNNNNCTC	2 cut(s)	188, 220
BpmI	CTGGAG	5 cut(s)	1120, 1221, 1365, 1401, 2496
Bpu10I	CCTNAGC	2 cut(s)	459, 1552
Bpu14I	TTCGAA	1 cut(s)	2717
BpuEI	CTTGAG	4 cut(s)	602, 628, 1235, 1442
BpuMI	CCSGG	1 cut(s)	22
BsaBI	GATNNNNATC	1 cut(s)	2697
BsaI	GGTCTC	1 cut(s)	2776
BsaJI	CCNNGG	3 cut(s)	535, 715, 2984
BsaWI	WCCGGW	4 cut(s)	428, 886, 1799, 2038
BsaXI	ACNNNNNCTCC	5 cut(s)	1118, 1148, 2948, 2978, 3089
Bsc4I	CCNNNNNNNGG	8 cut(s)	323, 464, 536, 1199, 1252, 1739, 2702, 2883
Bse118I	RCCGGY	1 cut(s)	2038
Bse1I	ACTGG	6 cut(s)	219, 692, 1027, 1028, 2651, 2847
Bse21I	CCTNAGG	2 cut(s)	1649, 1883
Bse3DI	GCAATG	5 cut(s)	107, 1366, 2529, 2736, 2886
Bse8I	GATNNNNATC	1 cut(s)	2697
BseBI	CCWGG	1 cut(s)	1200
BseDI	CCNNGG	3 cut(s)	535, 715, 2984
BseGI	GGATG	4 cut(s)	1282, 1924, 2073, 2742
BseJI	GATNNNNATC	1 cut(s)	2697
BseLI	CCNNNNNNNGG	8 cut(s)	323, 464, 536, 1199, 1252, 1739, 2702, 2883
BseMI	GCAATG	5 cut(s)	107, 1366, 2529, 2736, 2886
BseMII	CTCAG	9 cut(s)	270, 385, 473, 591, 1049, 1103, 1161, 1897, 2121
BseNI	ACTGG	6 cut(s)	219, 692, 1027, 1028, 2651, 2847
BseRI	GAGGAG	5 cut(s)	447, 1308, 2956, 2959, 3082
BseSI	GKGCMC	1 cut(s)	2373
BseXI	GCAGC	2 cut(s)	1856, 2098
Bsh1236I	CGCG	1 cut(s)	2250
BshFI	GGCC	2 cut(s)	1753, 2894
BshNI	GGYRCC	1 cut(s)	1367
BshTI	ACCGGT	1 cut(s)	2038
BsiHKAI	GWGCWC	1 cut(s)	2373
BsiSI	CCGG	5 cut(s)	22, 429, 887, 1800, 2039
BslFI	GGGAC	2 cut(s)	1616, 1953
BslI	CCNNNNNNNGG	8 cut(s)	323, 464, 536, 1199, 1252, 1739, 2702, 2883
BsmBI	CGTCTC	2 cut(s)	1197, 1445
BsmFI	GGGAC	2 cut(s)	1616, 1953
BsmI	GAATGC	1 cut(s)	986
BsnI	GGCC	2 cut(s)	1753, 2894
Bso31I	GGTCTC	1 cut(s)	2776
Bsp119I	TTCGAA	1 cut(s)	2717
Bsp1286I	GDGCHC	1 cut(s)	2373
Bsp1407I	TGTACA	1 cut(s)	2759
BspACI	CCGC	8 cut(s)	314, 407, 1274, 1558, 1764, 2078, 2592, 2877
BspANI	GGCC	2 cut(s)	1753, 2894
BspCNI	CTCAG	9 cut(s)	269, 384, 472, 592, 1048, 1102, 1160, 1896, 2122
BspFNI	CGCG	1 cut(s)	2250
BspLI	GGNNCC	6 cut(s)	329, 596, 879, 1369, 2511, 2694
BspMI	ACCTGC	2 cut(s)	239, 1616
BspQI	GCTCTTC	1 cut(s)	1923
BspT104I	TTCGAA	1 cut(s)	2717
BspT107I	GGYRCC	1 cut(s)	1367
BspTI	CTTAAG	2 cut(s)	544, 1177
BspTNI	GGTCTC	1 cut(s)	2776
BsrDI	GCAATG	5 cut(s)	107, 1366, 2529, 2736, 2886
BsrFI	RCCGGY	1 cut(s)	2038
BsrGI	TGTACA	1 cut(s)	2759
BsrI	ACTGG	6 cut(s)	219, 692, 1027, 1028, 2651, 2847
BssAI	RCCGGY	1 cut(s)	2038
BssECI	CCNNGG	3 cut(s)	535, 715, 2984
BssSI	CACGAG	3 cut(s)	2296, 2345, 2687
BssT1I	CCWWGG	3 cut(s)	535, 715, 2984
Bst2BI	CACGAG	3 cut(s)	2296, 2345, 2687
Bst2UI	CCWGG	1 cut(s)	1200
Bst6I	CTCTTC	6 cut(s)	577, 1315, 1477, 1923, 2454, 2619
BstAFI	CTTAAG	2 cut(s)	544, 1177
BstAUI	TGTACA	1 cut(s)	2759
BstBI	TTCGAA	1 cut(s)	2717
BstC8I	GCNNGC	3 cut(s)	253, 1831, 2248
BstF5I	GGATG	4 cut(s)	1282, 1924, 2073, 2742
BstFNI	CGCG	1 cut(s)	2250
BstHHI	GCGC	1 cut(s)	2252
BstMWI	GCNNNNNNNGC	5 cut(s)	703, 1442, 1622, 1853, 2598
BstNI	CCWGG	1 cut(s)	1200
BstNSI	RCATGY	1 cut(s)	946
BstSCI	CCNGG	2 cut(s)	20, 1198
BstSLI	GKGCMC	1 cut(s)	2373
BstUI	CGCG	1 cut(s)	2250
BstV1I	GCAGC	2 cut(s)	1856, 2098
BstV2I	GAAGAC	2 cut(s)	23, 2669
BstX2I	RGATCY	6 cut(s)	352, 594, 1186, 2424, 2692, 2698
BstYI	RGATCY	6 cut(s)	352, 594, 1186, 2424, 2692, 2698
Bsu36I	CCTNAGG	2 cut(s)	1649, 1883
BsuI	GTATCC	1 cut(s)	1325
BsuRI	GGCC	2 cut(s)	1753, 2894
BtrI	CACGTC	1 cut(s)	338
BtsCI	GGATG	4 cut(s)	1282, 1924, 2073, 2742
BtsIMutI	CAGTG	3 cut(s)	150, 379, 2840
BveI	ACCTGC	2 cut(s)	239, 1616
Cac8I	GCNNGC	3 cut(s)	253, 1831, 2248
CfoI	GCGC	1 cut(s)	2252
Cfr10I	RCCGGY	1 cut(s)	2038
Cfr13I	GGNCC	8 cut(s)	446, 734, 800, 1025, 1751, 2036, 2292, 2981
CseI	GACGC	1 cut(s)	1214
CspAI	ACCGGT	1 cut(s)	2038
CviAII	CATG	4 cut(s)	907, 943, 1477, 2506
DriI	GACNNNNNGTC	1 cut(s)	2920
Eam1104I	CTCTTC	6 cut(s)	577, 1315, 1477, 1923, 2454, 2619
Eam1105I	GACNNNNNGTC	1 cut(s)	2920
EarI	CTCTTC	6 cut(s)	577, 1315, 1477, 1923, 2454, 2619
Eco130I	CCWWGG	3 cut(s)	535, 715, 2984
Eco147I	AGGCCT	1 cut(s)	2894
Eco31I	GGTCTC	1 cut(s)	2776
Eco32I	GATATC	1 cut(s)	2145
Eco47I	GGWCC	7 cut(s)	446, 734, 800, 1025, 2036, 2292, 2981
Eco57I	CTGAAG	1 cut(s)	2381
Eco81I	CCTNAGG	2 cut(s)	1649, 1883
EcoO109I	RGGNCCY	1 cut(s)	734
EcoRI	GAATTC	1 cut(s)	320
EcoRII	CCWGG	1 cut(s)	1198
EcoRV	GATATC	1 cut(s)	2145
EcoT14I	CCWWGG	3 cut(s)	535, 715, 2984
EcoT22I	ATGCAT	2 cut(s)	1478, 2315
ErhI	CCWWGG	3 cut(s)	535, 715, 2984
Esp3I	CGTCTC	2 cut(s)	1197, 1445
FaeI	CATG	4 cut(s)	910, 946, 1480, 2509
FalI	AAGNNNNNCTT	6 cut(s)	18, 50, 148, 180, 2661, 2693
FaqI	GGGAC	2 cut(s)	1616, 1953
FatI	CATG	4 cut(s)	906, 942, 1476, 2505
FauNDI	CATATG	1 cut(s)	2653
FbaI	TGATCA	2 cut(s)	1401, 1534
Fnu4HI	GCNGC	4 cut(s)	1559, 1845, 2087, 2877
FokI	GGATG	4 cut(s)	1289, 1931, 2080, 2749
Fsp4HI	GCNGC	4 cut(s)	1559, 1845, 2087, 2877
FspBI	CTAG	5 cut(s)	536, 707, 926, 2441, 2681
GlaI	GCGC	1 cut(s)	2251
GluI	GCNGC	4 cut(s)	1559, 1845, 2087, 2877
GsuI	CTGGAG	5 cut(s)	1120, 1221, 1365, 1401, 2496
HaeIII	GGCC	2 cut(s)	1753, 2894
HapII	CCGG	5 cut(s)	22, 429, 887, 1800, 2039
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	1 cut(s)	2252
Hin1II	CATG	4 cut(s)	910, 946, 1480, 2509
Hin6I	GCGC	1 cut(s)	2250
HinP1I	GCGC	1 cut(s)	2250
HincII	GTYRAC	2 cut(s)	201, 1126
HindII	GTYRAC	2 cut(s)	201, 1126
HindIII	AAGCTT	3 cut(s)	128, 550, 2710
HpaI	GTTAAC	1 cut(s)	1126
HpaII	CCGG	5 cut(s)	22, 429, 887, 1800, 2039
HphI	GGTGA	2 cut(s)	2092, 2857
Hpy99I	CGWCG	1 cut(s)	3067
HpyAV	CCTTC	7 cut(s)	725, 833, 2018, 2189, 2648, 3010, 3038
HpyCH4IV	ACGT	6 cut(s)	337, 1391, 1685, 1725, 1984, 2851
HpyF10VI	GCNNNNNNNGC	5 cut(s)	703, 1442, 1622, 1853, 2598
HpySE526I	ACGT	6 cut(s)	337, 1391, 1685, 1725, 1984, 2851
Hsp92II	CATG	4 cut(s)	910, 946, 1480, 2509
HspAI	GCGC	1 cut(s)	2250
Ksp22I	TGATCA	2 cut(s)	1401, 1534
KspAI	GTTAAC	1 cut(s)	1126
LguI	GCTCTTC	1 cut(s)	1923
LmnI	GCTCC	4 cut(s)	1295, 1346, 2515, 2969
Lsp1109I	GCAGC	2 cut(s)	1856, 2098
LweI	GCATC	2 cut(s)	1307, 2199
MaeI	CTAG	5 cut(s)	536, 707, 926, 2441, 2681
MaeII	ACGT	6 cut(s)	337, 1391, 1685, 1725, 1984, 2851
MflI	RGATCY	6 cut(s)	352, 594, 1186, 2424, 2692, 2698
MhlI	GDGCHC	1 cut(s)	2373
MlyI	GAGTC	9 cut(s)	206, 432, 611, 685, 985, 1242, 1935, 2683, 2930
MmeI	TCCRAC	5 cut(s)	572, 1575, 1668, 2798, 2857
Mph1103I	ATGCAT	2 cut(s)	1478, 2315
MroXI	GAANNNNTTC	2 cut(s)	986, 1932
MslI	CAYNNNNRTG	3 cut(s)	725, 911, 2078
MspCI	CTTAAG	2 cut(s)	544, 1177
MspI	CCGG	5 cut(s)	22, 429, 887, 1800, 2039
MspR9I	CCNGG	2 cut(s)	22, 1200
Mva1269I	GAATGC	1 cut(s)	986
MvaI	CCWGG	1 cut(s)	1200
MvnI	CGCG	1 cut(s)	2250
MwoI	GCNNNNNNNGC	5 cut(s)	703, 1442, 1622, 1853, 2598
NciI	CCSGG	1 cut(s)	22
NdeI	CATATG	1 cut(s)	2653
NlaIII	CATG	4 cut(s)	910, 946, 1480, 2509
NlaIV	GGNNCC	6 cut(s)	329, 596, 879, 1369, 2511, 2694
NmeAIII	GCCGAG	2 cut(s)	220, 673
NmuCI	GTSAC	5 cut(s)	268, 1774, 2125, 2907, 2922
NsiI	ATGCAT	2 cut(s)	1478, 2315
NspI	RCATGY	1 cut(s)	946
NspV	TTCGAA	1 cut(s)	2717
PaqCI	CACCTGC	1 cut(s)	1616
PceI	AGGCCT	1 cut(s)	2894
PciI	ACATGT	1 cut(s)	942
PciSI	GCTCTTC	1 cut(s)	1923
PctI	GAATGC	1 cut(s)	986
PdmI	GAANNNNTTC	2 cut(s)	986, 1932
PfeI	GAWTC	4 cut(s)	1409, 1693, 2351, 2993
PfoI	TCCNGGA	1 cut(s)	1198
PinAI	ACCGGT	1 cut(s)	2038
PkrI	GCNGC	4 cut(s)	1560, 1846, 2088, 2878
PleI	GAGTC	9 cut(s)	205, 432, 610, 685, 984, 1242, 1935, 2682, 2929
PpsI	GAGTC	9 cut(s)	205, 432, 610, 685, 984, 1242, 1935, 2682, 2929
PpuMI	RGGWCCY	1 cut(s)	734
PscI	ACATGT	1 cut(s)	942
PsiI	TTATAA	1 cut(s)	2046
Psp5II	RGGWCCY	1 cut(s)	734
Psp6I	CCWGG	1 cut(s)	1198
PspGI	CCWGG	1 cut(s)	1198
PspN4I	GGNNCC	6 cut(s)	329, 596, 879, 1369, 2511, 2694
PspPI	GGNCC	8 cut(s)	446, 734, 800, 1025, 1751, 2036, 2292, 2981
PspPPI	RGGWCCY	1 cut(s)	734
PsrI	GAACNNNNNNTAC	2 cut(s)	370, 402
PsuI	RGATCY	6 cut(s)	352, 594, 1186, 2424, 2692, 2698
RseI	CAYNNNNRTG	3 cut(s)	725, 911, 2078
SapI	GCTCTTC	1 cut(s)	1923
SatI	GCNGC	4 cut(s)	1559, 1845, 2087, 2877
Sau96I	GGNCC	8 cut(s)	446, 734, 800, 1025, 1751, 2036, 2292, 2981
ScaI	AGTACT	1 cut(s)	1463
SchI	GAGTC	9 cut(s)	206, 432, 611, 685, 985, 1242, 1935, 2683, 2930
ScrFI	CCNGG	2 cut(s)	22, 1200
SduI	GDGCHC	1 cut(s)	2373
SfaNI	GCATC	2 cut(s)	1307, 2199
SfuI	TTCGAA	1 cut(s)	2717
SinI	GGWCC	7 cut(s)	446, 734, 800, 1025, 2036, 2292, 2981
SmiMI	CAYNNNNRTG	3 cut(s)	725, 911, 2078
SmlI	CTYRAG	6 cut(s)	544, 607, 617, 1177, 1250, 1457
SmoI	CTYRAG	6 cut(s)	544, 607, 617, 1177, 1250, 1457
SseBI	AGGCCT	1 cut(s)	2894
SsiI	CCGC	8 cut(s)	314, 407, 1274, 1558, 1764, 2078, 2592, 2877
SspMI	CTAG	5 cut(s)	536, 707, 926, 2441, 2681
StuI	AGGCCT	1 cut(s)	2894
StyD4I	CCNGG	2 cut(s)	20, 1198
StyI	CCWWGG	3 cut(s)	535, 715, 2984
TaiI	ACGT	6 cut(s)	340, 1394, 1688, 1728, 1987, 2854
TatI	WGTACW	4 cut(s)	239, 891, 1461, 2759
TauI	GCSGC	2 cut(s)	1561, 2879
TfiI	GAWTC	4 cut(s)	1409, 1693, 2351, 2993
TscAI	CASTG	3 cut(s)	150, 379, 2847
TseFI	GTSAC	5 cut(s)	268, 1774, 2125, 2907, 2922
TseI	GCWGC	2 cut(s)	1844, 2086
Tsp45I	GTSAC	5 cut(s)	268, 1774, 2125, 2907, 2922
TspGWI	ACGGA	1 cut(s)	1182
TspRI	CASTG	3 cut(s)	150, 379, 2847
Vha464I	CTTAAG	2 cut(s)	544, 1177
VneI	GTGCAC	1 cut(s)	2369
VpaK11BI	GGWCC	7 cut(s)	446, 734, 800, 1025, 2036, 2292, 2981
XapI	RAATTY	6 cut(s)	320, 402, 622, 1783, 2120, 3049
XbaI	TCTAGA	1 cut(s)	2680
XceI	RCATGY	1 cut(s)	946
XmaJI	CCTAGG	1 cut(s)	535
XmnI	GAANNNNTTC	2 cut(s)	986, 1932
XspI	CTAG	5 cut(s)	536, 707, 926, 2441, 2681
ZrmI	AGTACT	1 cut(s)	1463
Zsp2I	ATGCAT	2 cut(s)	1478, 2315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.