Rorug05G0115900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
10296386 .. 10299402
3017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0115900.1

Sequence Viewer

Length: 1560 bp
ATGCGCAACGATGACTGGGACTATGAGTCCATGTTCCGCCACGTCGTTGATCGGAGCTCCGGCAATGTCGTCGATATCAATATCGAGCACTTCGGCACGGACAAACTACTCACCTTTATCACCAAAAGTGCGAGTACAATCAGGCGCATCCGACTATTTTCTTGCGGTGAGGTATCAGATATGGGATTGAGTAGAATGGCTTCGAAACTGCGGCTGTTGGAGGAACTTGACATTTCATTGTGCGCTTGTATCTCACATGAAGCTGTAAAAATGGTTGGGCGCTCTTGCCCTCTTTTGAAGTCATTCAAACTCAACAAGGAGTGGTGCAGATTCTCTGATGATGAGTCTGACTCTGATGAGTATGGGTCTGACTTTGATGTGCATGACTTTGATGATAGTGATGACGATTATGCACATGCTCCTTTTGCTCATGCTCCTGTTGCTCATGCTCGTGTTAGAAAAGATGACAATGCAGATGCACTTGCTATAGCAGGAACGATGCAAGATTTACACCACCTCCAGCTTTATGGGAATAAGCTTACAGATGATGGCTTGAGAAAAATTCTTGATTGTTGTCCTCATCTTGAGTCACTTGATCTGCGCCTTTGCTTCAATCTGAATGTGGGGATAGATTTAGAAACAAGATTGAACGGATTAAAAGATAACATTACTATGTCAATACTGTCACGGCTTGGAACAATTGATATCCTGGAGAGTGCTCAGAAGGTATGCATGAAGTGGCGCAAAATCTGCAAGGAACTGAAGTGGAACACCATAGACATGCGCAATGATAGTGCTCCTGACATTTCCTTCGACTTGGATAAGATGTGCCGCCATGTTGTTGATCTTAGTTGTGGTAATTTGGTCGATGTGAATGTTGAGGATTTTATCTCGGATGAGCTCCTAGAGTATATAACTGATAGTTTGAGTGGAATCAGACGCCTGCGACTTGTGTGTTCTTATTACATATCAGATGAGGGATTGATTGAAGTTGCATCAAAACTTCCGCTGTTAGACGACCTTGACATCTCATTATGCGAAAATCTGTCAAATAAACCTGTGAAAGTGCTTGGGCGCTCTTGCCCTCTTTTGAAATCATTCAAATGGAATAAAAAATGGCACTACCATTCAGACAGCTTTTTTGAAGAGATTATTGACGATGAAGGTCCTTGGAGTAAAGATGACGATGCACTTGCTATAGCAGGAACGATGCATGGTTTACACCACCTGCAGCTTTTCGGGAATCAGCTGACCAATGATGGCTTAAGGGCAATTCTTGATAGTTGTCCTCATCTTGAGTCACTTGATCTGCGCCAGTGTTACAATCCTAATCTGGATGAAGATTTGGAGAAAAGATTGGTTGAACGAATTAAAATATTACGGCTTCCTGATGATTCAACTGATGACTATGAGTTTGATGCTACAGTTATCGAGTACGGATCAGATGTTGCAGAGAATGAAGTTGGAATTTTTTACGAAATGTTTATGGTAGATCACGAAGATGGTGACTTCCCCTGGAATGGTTTGGTTGAGTTTGATGATTTCTATTACTTTGCGTGA

Protein Analysis

519

Amino Acids

59.41

Weight (kDa)

4.62

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1236
Acc16I TGCGCA 2 cut(s) 5, 785
Acc36I ACCTGC 1 cut(s) 1236
AciI CCGC 5 cut(s) 37, 165, 211, 832, 1007
AclWI GGATC 1 cut(s) 1447
AcsI RAATTY 2 cut(s) 561, 1467
AcuI CTGAAG 1 cut(s) 782
AcyI GRCGYC 1 cut(s) 940
AfaI GTAC 2 cut(s) 136, 1436
AfiI CCNNNNNNNGG 1 cut(s) 1520
AflII CTTAAG 1 cut(s) 1264
AhdI GACNNNNNGTC 1 cut(s) 25
AjiI CACGTC 1 cut(s) 43
AjnI CCWGG 2 cut(s) 708, 1514
AluBI AGCT 8 cut(s) 57, 263, 523, 538, 901, 1137, 1234, 1249
AluI AGCT 8 cut(s) 57, 263, 523, 538, 901, 1137, 1234, 1249
Alw21I GWGCWC 5 cut(s) 59, 90, 721, 799, 903
AlwI GGATC 1 cut(s) 1447
ApeKI GCWGC 1 cut(s) 1231
ApoI RAATTY 2 cut(s) 561, 1467
ArsI GACNNNNNNTTYG 6 cut(s) 794, 826, 1124, 1156, 1397, 1429
Asp700I GAANNNNTTC 3 cut(s) 199, 302, 1097
AspLEI GCGC 9 cut(s) 6, 147, 245, 282, 603, 744, 786, 1077, 1314
AspS9I GGNCC 1 cut(s) 1166
AsuHPI GGTGA 4 cut(s) 103, 112, 179, 1517
AsuII TTCGAA 1 cut(s) 203
AvaII GGWCC 1 cut(s) 1166
BanII GRGCYC 2 cut(s) 59, 903
BarI GAAGNNNNNNTAC 2 cut(s) 184, 216
BauI CACGAG 1 cut(s) 450
Bbv12I GWGCWC 5 cut(s) 59, 90, 721, 799, 903
BbvI GCAGC 1 cut(s) 1243
BccI CCATC 3 cut(s) 542, 1253, 1496
BceAI ACGGC 2 cut(s) 704, 1397
BcgI CGANNNNNNTGC 4 cut(s) 52, 86, 1175, 1209
BciT130I CCWGG 2 cut(s) 710, 1516
BfaI CTAG 1 cut(s) 905
BfmI CTRYAG 4 cut(s) 486, 1197, 1229, 1422
BfoI RGCGCY 2 cut(s) 283, 1078
BfrI CTTAAG 1 cut(s) 1264
BfuAI ACCTGC 1 cut(s) 1236
BisI GCNGC 3 cut(s) 212, 832, 1232
BlsI GCNGC 3 cut(s) 213, 833, 1233
Bme1390I CCNGG 2 cut(s) 710, 1516
Bme18I GGWCC 1 cut(s) 1166
BmeRI GACNNNNNGTC 1 cut(s) 25
BmgBI CACGTC 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 1166
BmrFI CCNGG 2 cut(s) 710, 1516
BmrI ACTGGG 1 cut(s) 25
BmsI GCATC 7 cut(s) 156, 466, 489, 1004, 1177, 1200, 1408
BmuI ACTGGG 1 cut(s) 25
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 2 cut(s) 503, 731
Bpu14I TTCGAA 1 cut(s) 203
BpuEI CTTGAG 3 cut(s) 574, 605, 1316
BsaHI GRCGYC 1 cut(s) 940
BsaJI CCNNGG 2 cut(s) 1169, 1514
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 1 cut(s) 1520
Bse1I ACTGG 2 cut(s) 20, 1315
Bse3DI GCAATG 2 cut(s) 70, 793
BseBI CCWGG 2 cut(s) 710, 1516
BseDI CCNNGG 2 cut(s) 1169, 1514
BseGI GGATG 3 cut(s) 147, 901, 1342
BseLI CCNNNNNNNGG 1 cut(s) 1520
BseMI GCAATG 2 cut(s) 70, 793
BseMII CTCAG 1 cut(s) 734
BseNI ACTGG 2 cut(s) 20, 1315
BseXI GCAGC 1 cut(s) 1243
BsgI GTGCAG 1 cut(s) 346
BsiHKAI GWGCWC 5 cut(s) 59, 90, 721, 799, 903
BsiSI CCGG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 1520
BsmFI GGGAC 1 cut(s) 32
Bsp119I TTCGAA 1 cut(s) 203
Bsp1286I GDGCHC 5 cut(s) 59, 90, 721, 799, 903
Bsp143I GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
BspACI CCGC 5 cut(s) 37, 165, 211, 832, 1007
BspCNI CTCAG 1 cut(s) 733
BspMAI CTGCAG 1 cut(s) 1233
BspMI ACCTGC 1 cut(s) 1236
BspPI GGATC 1 cut(s) 1447
BspT104I TTCGAA 1 cut(s) 203
BspTI CTTAAG 1 cut(s) 1264
BsrDI GCAATG 2 cut(s) 70, 793
BsrI ACTGG 2 cut(s) 20, 1315
BssECI CCNNGG 2 cut(s) 1169, 1514
BssMI GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
BssNI GRCGYC 1 cut(s) 940
BssSI CACGAG 1 cut(s) 450
BssT1I CCWWGG 1 cut(s) 1169
Bst2BI CACGAG 1 cut(s) 450
Bst2UI CCWGG 2 cut(s) 710, 1516
Bst4CI ACNGT 2 cut(s) 684, 1426
Bst6I CTCTTC 1 cut(s) 1140
BstACI GRCGYC 1 cut(s) 940
BstAFI CTTAAG 1 cut(s) 1264
BstAPI GCANNNNNTGC 1 cut(s) 750
BstBI TTCGAA 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 944
BstDEI CTNAG 2 cut(s) 720, 848
BstF5I GGATG 3 cut(s) 147, 901, 1342
BstH2I RGCGCY 2 cut(s) 283, 1078
BstHHI GCGC 9 cut(s) 6, 147, 245, 282, 603, 744, 786, 1077, 1314
BstKTI GATC 6 cut(s) 52, 598, 847, 1309, 1442, 1495
BstMBI GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
BstMWI GCNNNNNNNGC 3 cut(s) 425, 440, 750
BstNI CCWGG 2 cut(s) 710, 1516
BstNSI RCATGY 2 cut(s) 419, 784
BstSCI CCNGG 2 cut(s) 708, 1514
BstSFI CTRYAG 4 cut(s) 486, 1197, 1229, 1422
BstV1I GCAGC 1 cut(s) 1243
BstXI CCANNNNNNTGG 1 cut(s) 527
BtrI CACGTC 1 cut(s) 43
BtsCI GGATG 3 cut(s) 147, 901, 1342
BtsIMutI CAGTG 1 cut(s) 1322
BveI ACCTGC 1 cut(s) 1236
Cac8I GCNNGC 1 cut(s) 944
CfoI GCGC 9 cut(s) 6, 147, 245, 282, 603, 744, 786, 1077, 1314
Cfr13I GGNCC 1 cut(s) 1166
CseI GACGC 1 cut(s) 948
Csp6I GTAC 2 cut(s) 135, 1435
CviQI GTAC 2 cut(s) 135, 1435
DdeI CTNAG 2 cut(s) 720, 848
DpnI GATC 6 cut(s) 51, 597, 846, 1308, 1441, 1494
DpnII GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
DriI GACNNNNNGTC 1 cut(s) 25
Eam1104I CTCTTC 1 cut(s) 1140
Eam1105I GACNNNNNGTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 1140
EciI GGCGGA 1 cut(s) 26
Ecl136II GAGCTC 2 cut(s) 57, 901
Eco130I CCWWGG 1 cut(s) 1169
Eco24I GRGCYC 2 cut(s) 59, 903
Eco32I GATATC 2 cut(s) 76, 706
Eco47I GGWCC 1 cut(s) 1166
Eco53kI GAGCTC 2 cut(s) 57, 901
Eco57I CTGAAG 1 cut(s) 782
EcoICRI GAGCTC 2 cut(s) 57, 901
EcoO109I RGGNCCY 1 cut(s) 1166
EcoRII CCWGG 2 cut(s) 708, 1514
EcoRV GATATC 2 cut(s) 76, 706
EcoT14I CCWWGG 1 cut(s) 1169
EcoT22I ATGCAT 2 cut(s) 734, 1215
EcoT38I GRGCYC 2 cut(s) 59, 903
ErhI CCWWGG 1 cut(s) 1169
FaqI GGGAC 1 cut(s) 32
Fnu4HI GCNGC 3 cut(s) 212, 832, 1232
FokI GGATG 3 cut(s) 134, 908, 1349
FriOI GRGCYC 2 cut(s) 59, 903
Fsp4HI GCNGC 3 cut(s) 212, 832, 1232
FspBI CTAG 1 cut(s) 905
FspI TGCGCA 2 cut(s) 5, 785
GlaI GCGC 9 cut(s) 5, 146, 244, 281, 602, 743, 785, 1076, 1313
GluI GCNGC 3 cut(s) 212, 832, 1232
GsuI CTGGAG 2 cut(s) 503, 731
HaeII RGCGCY 2 cut(s) 283, 1078
HapII CCGG 1 cut(s) 60
HgaI GACGC 1 cut(s) 948
HhaI GCGC 9 cut(s) 6, 147, 245, 282, 603, 744, 786, 1077, 1314
Hin1I GRCGYC 1 cut(s) 940
Hin6I GCGC 9 cut(s) 4, 145, 243, 280, 601, 742, 784, 1075, 1312
HinP1I GCGC 9 cut(s) 4, 145, 243, 280, 601, 742, 784, 1075, 1312
HindIII AAGCTT 1 cut(s) 536
HinfI GANTC 9 cut(s) 26, 330, 344, 350, 587, 933, 1243, 1298, 1394
HpaII CCGG 1 cut(s) 60
HphI GGTGA 4 cut(s) 103, 112, 179, 1517
Hpy166II GTNNAC 1 cut(s) 1220
Hpy188III TCNNGA 9 cut(s) 566, 584, 800, 1240, 1277, 1295, 1334, 1388, 1496
Hpy8I GTNNAC 1 cut(s) 1220
Hpy99I CGWCG 2 cut(s) 47, 74
HpyAV CCTTC 3 cut(s) 718, 820, 1157
HpyCH4III ACNGT 2 cut(s) 684, 1426
HpyCH4IV ACGT 1 cut(s) 42
HpyF10VI GCNNNNNNNGC 3 cut(s) 425, 440, 750
HpyF3I CTNAG 2 cut(s) 720, 848
HpySE526I ACGT 1 cut(s) 42
Hsp92I GRCGYC 1 cut(s) 940
HspAI GCGC 9 cut(s) 4, 145, 243, 280, 601, 742, 784, 1075, 1312
Kzo9I GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
LmnI GCTCC 6 cut(s) 54, 62, 424, 439, 802, 906
Lsp1109I GCAGC 1 cut(s) 1243
LweI GCATC 7 cut(s) 156, 466, 489, 1004, 1177, 1200, 1408
MaeI CTAG 1 cut(s) 905
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 5 cut(s) 588, 684, 1299, 1319, 1505
MalI GATC 6 cut(s) 51, 597, 846, 1308, 1441, 1494
MboI GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
MboII GAAGA 3 cut(s) 1157, 1352, 1511
MfeI CAATTG 1 cut(s) 699
MhlI GDGCHC 5 cut(s) 59, 90, 721, 799, 903
MluCI AATT 6 cut(s) 561, 699, 859, 1272, 1368, 1467
MlyI GAGTC 5 cut(s) 35, 344, 353, 596, 1307
MmeI TCCRAC 3 cut(s) 175, 198, 1444
MnlI CCTC 9 cut(s) 163, 214, 300, 527, 588, 874, 970, 1095, 1299
Mph1103I ATGCAT 2 cut(s) 734, 1215
MroXI GAANNNNTTC 3 cut(s) 199, 302, 1097
MseI TTAA 3 cut(s) 656, 1265, 1371
MslI CAYNNNNRTG 5 cut(s) 450, 671, 779, 1102, 1500
MspA1I CMGCKG 2 cut(s) 1009, 1249
MspCI CTTAAG 1 cut(s) 1264
MspI CCGG 1 cut(s) 60
MspR9I CCNGG 2 cut(s) 710, 1516
MunI CAATTG 1 cut(s) 699
MvaI CCWGG 2 cut(s) 710, 1516
MwoI GCNNNNNNNGC 3 cut(s) 425, 440, 750
NdeII GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
NmuCI GTSAC 4 cut(s) 588, 684, 1299, 1505
NsbI TGCGCA 2 cut(s) 5, 785
NsiI ATGCAT 2 cut(s) 734, 1215
NspI RCATGY 2 cut(s) 419, 784
NspV TTCGAA 1 cut(s) 203
PaqCI CACCTGC 1 cut(s) 1236
PdmI GAANNNNTTC 3 cut(s) 199, 302, 1097
PfeI GAWTC 4 cut(s) 330, 933, 1243, 1394
PfoI TCCNGGA 1 cut(s) 708
PkrI GCNGC 3 cut(s) 213, 833, 1233
PleI GAGTC 5 cut(s) 34, 344, 352, 595, 1306
PpsI GAGTC 5 cut(s) 34, 344, 352, 595, 1306
PpuMI RGGWCCY 1 cut(s) 1166
Psp124BI GAGCTC 2 cut(s) 59, 903
Psp5II RGGWCCY 1 cut(s) 1166
Psp6I CCWGG 2 cut(s) 708, 1514
PspGI CCWGG 2 cut(s) 708, 1514
PspPI GGNCC 1 cut(s) 1166
PspPPI RGGWCCY 1 cut(s) 1166
PstI CTGCAG 1 cut(s) 1233
PvuII CAGCTG 1 cut(s) 1249
RsaI GTAC 2 cut(s) 136, 1436
RsaNI GTAC 2 cut(s) 135, 1435
RseI CAYNNNNRTG 5 cut(s) 450, 671, 779, 1102, 1500
SacI GAGCTC 2 cut(s) 59, 903
SaqAI TTAA 3 cut(s) 656, 1265, 1371
SatI GCNGC 3 cut(s) 212, 832, 1232
Sau3AI GATC 6 cut(s) 49, 595, 844, 1306, 1439, 1492
Sau96I GGNCC 1 cut(s) 1166
SchI GAGTC 5 cut(s) 35, 344, 353, 596, 1307
ScrFI CCNGG 2 cut(s) 710, 1516
SduI GDGCHC 5 cut(s) 59, 90, 721, 799, 903
SfaNI GCATC 7 cut(s) 156, 466, 489, 1004, 1177, 1200, 1408
SfcI CTRYAG 4 cut(s) 486, 1197, 1229, 1422
SfuI TTCGAA 1 cut(s) 203
SinI GGWCC 1 cut(s) 1166
SmiMI CAYNNNNRTG 5 cut(s) 450, 671, 779, 1102, 1500
SmlI CTYRAG 4 cut(s) 553, 584, 1264, 1295
SmoI CTYRAG 4 cut(s) 553, 584, 1264, 1295
Sse9I AATT 6 cut(s) 561, 699, 859, 1272, 1368, 1467
SsiI CCGC 5 cut(s) 37, 165, 211, 832, 1007
SspI AATATT 1 cut(s) 1377
SspMI CTAG 1 cut(s) 905
SstI GAGCTC 2 cut(s) 59, 903
StyD4I CCNGG 2 cut(s) 708, 1514
StyI CCWWGG 1 cut(s) 1169
TaaI ACNGT 2 cut(s) 684, 1426
TaiI ACGT 1 cut(s) 45
TaqI TCGA 6 cut(s) 72, 84, 203, 813, 867, 1431
TasI AATT 6 cut(s) 561, 699, 859, 1272, 1368, 1467
TatI WGTACW 1 cut(s) 134
TauI GCSGC 2 cut(s) 214, 834
TfiI GAWTC 4 cut(s) 330, 933, 1243, 1394
Tru1I TTAA 3 cut(s) 656, 1265, 1371
Tru9I TTAA 3 cut(s) 656, 1265, 1371
TscAI CASTG 1 cut(s) 1322
TseFI GTSAC 4 cut(s) 588, 684, 1299, 1505
TseI GCWGC 1 cut(s) 1231
Tsp45I GTSAC 4 cut(s) 588, 684, 1299, 1505
TspDTI ATGAA 6 cut(s) 225, 273, 749, 1176, 1353, 1473
TspGWI ACGGA 3 cut(s) 113, 666, 1452
TspRI CASTG 1 cut(s) 1322
Vha464I CTTAAG 1 cut(s) 1264
VpaK11BI GGWCC 1 cut(s) 1166
XapI RAATTY 2 cut(s) 561, 1467
XceI RCATGY 2 cut(s) 419, 784
XmnI GAANNNNTTC 3 cut(s) 199, 302, 1097
XspI CTAG 1 cut(s) 905
Zsp2I ATGCAT 2 cut(s) 734, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.