Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003368.1

Orthogroup ID

OG0002164

Physical Location & Seq

Genomic Coordinates Reverse (-)

59051 .. 63524

Gene Structure 4474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003368.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

atgaaattcaatggtaatcagtacgaagaggacttgagccctgagggaccgtcagacttcatttcctcatttgagaagtggggttatagcagtacagggatttacatggggaaggaaaaagcagattacacagcaacaaacacatcacctcttaatggttcaccaatttatcaaactgcccgccttgtcccgctctcactcaagtattatggcctttgcatgcttaagggtagttacaaagtgcagctccacttcgctgaaataaagtattcagataatggcacattcactgacctcgggcagcgcatatttgatgtgtcaattcaaggaaatttggttttaaaggatttcaatattatgaaggaagcaggaggtgctggtaaagacatcgtcaaagaatttaatgtccttgttaatggtagcactctagaaatccacttatcctggaaaggaaaaggaactaatgcaatacctgataggggtggctatggacctcttatatctgcaattactgtgacaccaaattttaatgttgatattggcctatctgctggagctattgctggcattgtagtagcatcatgtgtgttgattgtattgattttggcagtccttcgatatatgggttacttggggggcaaagaccttgaagataaagaactgcgtgggctagaactacaaacaggttatttcaccttacgacaaattaaagctgccacaggtaactttgatccttcaaataagataggtgaaggaggttttgggcccgttcacaagggggtactactagatggtgctgtaattgctgttaagcagctctcatctaaatcaaagcaagggaaccgtgaatttgttaacgagataggcatgatatctgctttgcaacacccaaatctcgtgaagctttttggttgctgtatcgaaggaaaccagttattgcttatatatgaatacatggaaaacaatagtcttgcccgtgcactttttggtcgtgaagaacaacggctacacttggactggaaaacaagaaagaagatatgcatggggatagcgagagggttggcctatcttcatgaagaatcaaggttgaaaattgttcacagggatataaaggcaactaatgtcctgcttgataaggatctgaatgccaaaatatctgattttggtttagctaagctggatgaagaagagaactcacatattagcactcgaatagctggaacaataggctatatggcacctgaatacgcaatgaggggatacttgactgacaaagcagatgtgtacagttttggtatcgttgccttagaaatagtcagtggaaagagcaacacaaattaccgaccaagggaggagtacgtgtatctccttgattgggcctatgtcctacaagagcaaggaaatatgttagaacttgtggatccagatcttggttcaaactactccaaagaagaggcgatgacaatgcttaacttggcgctcttatgcaccaatccatctcccactctcagaccacccatgtcatctgtcgtaagcatgcttgaaggtaaaagtccgattcaagcaccgttaatcaagggcgacacgatggagcaggatgcgaggttcaaagcctttgagagactatcacaagacagccaaacacatgtttcaactctctcgcaagatagtcttgtaagaggaacatcaatggaaggtccattgattgattcttcggtttctatcgctagtaaggatgagtcccatgaacatccttcaacaagcctactcaaggatctgtacgatgatgtgatcaacaaggtcagacaagagttcatagatggccccggagaaaaactactcatgcagcttcaagcaacttgggaggccaagatgatgcaagccggtgttgttggtacgcctgctgtggatctcaatgtaccagtgttccccccattaccgttacacgttccagttcaaccacaaccgcctctaccggaaactggagacaacttgttaaatactattcctaccggagcaccatacatgcaacctccttatcctgggattacctctcaaacatatcagaccgctgagggggatgatgagcccccattgattgaagacgacgacgatgatttggatgatgtggaggagggagaggaggagcatgaagtccatgaacacacagaatttggtgttggctcagtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

730

Amino Acids

80.34

Weight (kDa)

4.87

Isoelectric Point (pI)

32.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53430 AT1G53430 AT1G53440
fragaria_vesca	FvH4_3g17940
malus_domestica	MD03G1247100.v1.1 MD03G1248200.v1.1 MD03G1248300.v1.1 MD03G1249100.v1.1 MD03G1249200.v1.1 MD11G1267500.v1.1
prunus_persica	Prupe.4G158000_v2.0.a1 Prupe.4G158000_v2.0.a1
pyrus_communis	pycom03g19620 pycom03g19750 pycom06g03840 pycom11g23530
rosa_chinensis	RchiOBHm_Chr5g0029911 RchiOBHm_Chr5g0029981
rosa_laevigata	RLG00000033201 RLG00000033206
rosa_multiflora	Rmu_sc0003368.1_g000014 Rmu_sc0004542.1_g000020 Rmu_sc0021047.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050050
rosa_rugosa	Rorug05G0115300 Rorug05G0115400 Rorug05G0115500 Rorug05G0115600 Rorug05G0115700 Rorug05G0115800 Rorug05G0115900 Rorug05G0116000 Rorug05G0116100 Rorug05G0116200
rosa_samantha	Rh5AG208900 Rh5AG209100 Rh5BG207700 Rh5CG231100 Rh5CG231800 Rh5DG211900 Rh5DG212500
rosa_wichuraiana	Rw5G019010 Rw5G019050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	1 cut(s)	1430
AccBSI	CCGCTC	1 cut(s)	193
AciI	CCGC	4 cut(s)	181, 191, 1967, 2070
AclWI	GGATC	6 cut(s)	725, 1146, 1415, 1428, 1782, 1917
AcsI	RAATTY	6 cut(s)	5, 331, 398, 523, 848, 2171
AfaI	GTAC	8 cut(s)	23, 94, 783, 1286, 1358, 1781, 1897, 1920
AfiI	CCNNNNNNNGG	9 cut(s)	155, 479, 1348, 1375, 1430, 1771, 1982, 2042, 2076
AflII	CTTAAG	1 cut(s)	224
AflIII	ACRYGT	3 cut(s)	1359, 1645, 1945
AjnI	CCWGG	2 cut(s)	443, 2041
AjuI	GAANNNNNNNTTGG	3 cut(s)	744, 776, 2163
AloI	GAACNNNNNNTCC	2 cut(s)	1589, 1621
AluBI	AGCT	9 cut(s)	247, 557, 713, 817, 904, 1172, 1177, 1217, 1849
AluI	AGCT	9 cut(s)	247, 557, 713, 817, 904, 1172, 1177, 1217, 1849
Alw21I	GWGCWC	2 cut(s)	982, 2020
Alw26I	GTCTC	2 cut(s)	1615, 1980
Alw44I	GTGCAC	1 cut(s)	978
AlwI	GGATC	6 cut(s)	725, 1146, 1415, 1428, 1782, 1917
Ama87I	CYCGRG	1 cut(s)	296
AoxI	GGCC	7 cut(s)	211, 541, 764, 1062, 1377, 1822, 1866
ApaI	GGGCCC	1 cut(s)	768
ApaLI	GTGCAC	1 cut(s)	978
ApeKI	GCWGC	5 cut(s)	244, 301, 713, 814, 1846
ApoI	RAATTY	6 cut(s)	5, 331, 398, 523, 848, 2171
AspLEI	GCGC	2 cut(s)	306, 1480
AspS9I	GGNCC	7 cut(s)	47, 491, 764, 765, 1377, 1697, 1823
AsuC2I	CCSGG	1 cut(s)	1827
AsuHPI	GGTGA	4 cut(s)	138, 153, 685, 761
AvaI	CYCGRG	1 cut(s)	296
AvaII	GGWCC	3 cut(s)	47, 491, 1697
AxyI	CCTNAGG	1 cut(s)	42
BaeGI	GKGCMC	2 cut(s)	768, 982
BamHI	GGATCC	1 cut(s)	1420
BanI	GGYRCC	1 cut(s)	1237
BanII	GRGCYC	3 cut(s)	41, 768, 2091
BauI	CACGAG	1 cut(s)	896
BbsI	GAAGAC	1 cut(s)	2109
Bbv12I	GWGCWC	2 cut(s)	982, 2020
BbvCI	CCTCAGC	1 cut(s)	2073
BbvI	GCAGC	5 cut(s)	256, 313, 700, 826, 1858
BccI	CCATC	4 cut(s)	785, 1504, 1582, 1814
BceAI	ACGGC	1 cut(s)	1019
BcgI	CGANNNNNNTGC	2 cut(s)	1447, 1481
BciT130I	CCWGG	2 cut(s)	445, 2043
BciVI	GTATCC	1 cut(s)	1253
BclI	TGATCA	1 cut(s)	1791
BcnI	CCSGG	1 cut(s)	1827
BcoDI	GTCTC	2 cut(s)	1615, 1980
BfaI	CTAG	4 cut(s)	428, 671, 788, 1728
BfoI	RGCGCY	1 cut(s)	1481
BfrI	CTTAAG	1 cut(s)	224
BfuI	GTATCC	1 cut(s)	1253
BglII	AGATCT	1 cut(s)	1426
BisI	GCNGC	5 cut(s)	245, 302, 714, 815, 1847
BlpI	GCTNAGC	1 cut(s)	1173
BlsI	GCNGC	5 cut(s)	246, 303, 715, 816, 1848
Bme1390I	CCNGG	3 cut(s)	445, 1827, 2043
Bme18I	GGWCC	3 cut(s)	47, 491, 1697
BmeT110I	CYCGRG	1 cut(s)	296
BmgT120I	GGNCC	7 cut(s)	47, 491, 764, 765, 1377, 1697, 1823
BmiI	GGNNCC	6 cut(s)	48, 766, 842, 1239, 1422, 1825
BmrFI	CCNGG	3 cut(s)	445, 1827, 2043
BmsI	GCATC	3 cut(s)	587, 1588, 1866
BpiI	GAAGAC	1 cut(s)	2109
BpmI	CTGGAG	2 cut(s)	573, 2004
Bpu10I	CCTNAGC	1 cut(s)	2073
Bpu1102I	GCTNAGC	1 cut(s)	1173
BpuEI	CTTGAG	3 cut(s)	55, 185, 1754
BpuMI	CCSGG	1 cut(s)	1827
BsaAI	YACGTR	1 cut(s)	1360
BsaBI	GATNNNNATC	2 cut(s)	1137, 1425
BsaJI	CCNNGG	4 cut(s)	295, 1346, 1825, 2042
BsaWI	WCCGGW	2 cut(s)	1975, 2012
BsaXI	ACNNNNNCTCC	2 cut(s)	1346, 1376
Bsc4I	CCNNNNNNNGG	9 cut(s)	155, 479, 1348, 1375, 1430, 1771, 1982, 2042, 2076
Bse118I	RCCGGY	1 cut(s)	1883
Bse1I	ACTGG	5 cut(s)	931, 1022, 1922, 1952, 1987
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	1 cut(s)	1257
Bse8I	GATNNNNATC	2 cut(s)	1137, 1425
BseBI	CCWGG	2 cut(s)	445, 2043
BseDI	CCNNGG	4 cut(s)	295, 1346, 1825, 2042
BseGI	GGATG	6 cut(s)	1186, 1603, 1741, 1750, 2086, 2128
BseJI	GATNNNNATC	2 cut(s)	1137, 1425
BseLI	CCNNNNNNNGG	9 cut(s)	155, 479, 1348, 1375, 1430, 1771, 1982, 2042, 2076
BseMI	GCAATG	1 cut(s)	1257
BseMII	CTCAG	3 cut(s)	33, 1522, 2064
BseNI	ACTGG	5 cut(s)	931, 1022, 1922, 1952, 1987
BseRI	GAGGAG	4 cut(s)	1367, 2147, 2156, 2159
BseSI	GKGCMC	2 cut(s)	768, 982
BseXI	GCAGC	5 cut(s)	256, 313, 700, 826, 1858
BsgI	GTGCAG	1 cut(s)	263
BshFI	GGCC	7 cut(s)	213, 543, 766, 1064, 1379, 1824, 1868
BshNI	GGYRCC	1 cut(s)	1237
BsiHKAI	GWGCWC	2 cut(s)	982, 2020
BsiHKCI	CYCGRG	1 cut(s)	296
BsiSI	CCGG	4 cut(s)	1827, 1884, 1976, 2013
BslFI	GGGAC	3 cut(s)	60, 173, 1726
BslI	CCNNNNNNNGG	9 cut(s)	155, 479, 1348, 1375, 1430, 1771, 1982, 2042, 2076
BsmAI	GTCTC	2 cut(s)	1615, 1980
BsmFI	GGGAC	3 cut(s)	60, 173, 1726
BsmI	GAATGC	1 cut(s)	1150
BsnI	GGCC	7 cut(s)	213, 543, 766, 1064, 1379, 1824, 1868
BsoBI	CYCGRG	1 cut(s)	296
Bsp120I	GGGCCC	1 cut(s)	764
Bsp1286I	GDGCHC	5 cut(s)	41, 768, 982, 2020, 2091
Bsp1407I	TGTACA	1 cut(s)	1284
Bsp143I	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
Bsp1720I	GCTNAGC	1 cut(s)	1173
BspACI	CCGC	4 cut(s)	181, 191, 1967, 2070
BspANI	GGCC	7 cut(s)	213, 543, 766, 1064, 1379, 1824, 1868
BspCNI	CTCAG	3 cut(s)	34, 1521, 2065
BspHI	TCATGA	1 cut(s)	1072
BspLI	GGNNCC	6 cut(s)	48, 766, 842, 1239, 1422, 1825
BspPI	GGATC	6 cut(s)	725, 1146, 1415, 1428, 1782, 1917
BspT107I	GGYRCC	1 cut(s)	1237
BspTI	CTTAAG	1 cut(s)	224
BsrBI	CCGCTC	1 cut(s)	193
BsrDI	GCAATG	1 cut(s)	1257
BsrFI	RCCGGY	1 cut(s)	1883
BsrGI	TGTACA	1 cut(s)	1284
BsrI	ACTGG	5 cut(s)	931, 1022, 1922, 1952, 1987
BssAI	RCCGGY	1 cut(s)	1883
BssECI	CCNNGG	4 cut(s)	295, 1346, 1825, 2042
BssMI	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
BssSI	CACGAG	1 cut(s)	896
BssT1I	CCWWGG	1 cut(s)	1346
Bst2BI	CACGAG	1 cut(s)	896
Bst2UI	CCWGG	2 cut(s)	445, 2043
Bst4CI	ACNGT	6 cut(s)	51, 514, 845, 1289, 1569, 1941
Bst6I	CTCTTC	3 cut(s)	21, 1182, 1446
BstAFI	CTTAAG	1 cut(s)	224
BstAPI	GCANNNNNTGC	1 cut(s)	374
BstAUI	TGTACA	1 cut(s)	1284
BstBAI	YACGTR	1 cut(s)	1360
BstC8I	GCNNGC	6 cut(s)	181, 221, 565, 1538, 1881, 1902
BstDEI	CTNAG	6 cut(s)	42, 1173, 1306, 1508, 2073, 2185
BstENI	CCTNNNNNAGG	1 cut(s)	1769
BstF5I	GGATG	6 cut(s)	1186, 1603, 1741, 1750, 2086, 2128
BstH2I	RGCGCY	1 cut(s)	1481
BstHHI	GCGC	2 cut(s)	306, 1480
BstKTI	GATC	7 cut(s)	733, 1141, 1423, 1429, 1777, 1794, 1912
BstMAI	GTCTC	2 cut(s)	1615, 1980
BstMBI	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
BstMWI	GCNNNNNNNGC	2 cut(s)	374, 803
BstNI	CCWGG	2 cut(s)	445, 2043
BstNSI	RCATGY	4 cut(s)	223, 1540, 1649, 2029
BstSCI	CCNGG	3 cut(s)	443, 1825, 2041
BstSLI	GKGCMC	2 cut(s)	768, 982
BstV1I	GCAGC	5 cut(s)	256, 313, 700, 826, 1858
BstV2I	GAAGAC	1 cut(s)	2109
BstX2I	RGATCY	5 cut(s)	1138, 1420, 1426, 1774, 1909
BstYI	RGATCY	5 cut(s)	1138, 1420, 1426, 1774, 1909
Bsu36I	CCTNAGG	1 cut(s)	42
BsuI	GTATCC	1 cut(s)	1253
BsuRI	GGCC	7 cut(s)	213, 543, 766, 1064, 1379, 1824, 1868
BtgZI	GCGATG	1 cut(s)	1472
BtsCI	GGATG	6 cut(s)	1186, 1603, 1741, 1750, 2086, 2128
BtsIMutI	CAGTG	3 cut(s)	288, 1324, 1929
Cac8I	GCNNGC	6 cut(s)	181, 221, 565, 1538, 1881, 1902
CciI	TCATGA	1 cut(s)	1072
CfoI	GCGC	2 cut(s)	306, 1480
Cfr10I	RCCGGY	1 cut(s)	1883
Cfr13I	GGNCC	7 cut(s)	47, 491, 764, 765, 1377, 1697, 1823
Csp6I	GTAC	8 cut(s)	22, 93, 782, 1285, 1357, 1780, 1896, 1919
CviQI	GTAC	8 cut(s)	22, 93, 782, 1285, 1357, 1780, 1896, 1919
DdeI	CTNAG	6 cut(s)	42, 1173, 1306, 1508, 2073, 2185
DpnI	GATC	7 cut(s)	732, 1140, 1422, 1428, 1776, 1793, 1911
DpnII	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
DraI	TTTAAA	1 cut(s)	342
Eam1104I	CTCTTC	3 cut(s)	21, 1182, 1446
EarI	CTCTTC	3 cut(s)	21, 1182, 1446
Eco130I	CCWWGG	1 cut(s)	1346
Eco24I	GRGCYC	3 cut(s)	41, 768, 2091
Eco32I	GATATC	1 cut(s)	873
Eco47I	GGWCC	3 cut(s)	47, 491, 1697
Eco81I	CCTNAGG	1 cut(s)	42
Eco88I	CYCGRG	1 cut(s)	296
EcoNI	CCTNNNNNAGG	1 cut(s)	1769
EcoRII	CCWGG	2 cut(s)	443, 2041
EcoRV	GATATC	1 cut(s)	873
EcoT14I	CCWWGG	1 cut(s)	1346
EcoT22I	ATGCAT	1 cut(s)	1043
EcoT38I	GRGCYC	3 cut(s)	41, 768, 2091
ErhI	CCWWGG	1 cut(s)	1346
FalI	AAGNNNNNCTT	2 cut(s)	1656, 1688
FaqI	GGGAC	3 cut(s)	60, 173, 1726
FauI	CCCGC	2 cut(s)	188, 198
FbaI	TGATCA	1 cut(s)	1791
Fnu4HI	GCNGC	5 cut(s)	245, 302, 714, 815, 1847
FokI	GGATG	6 cut(s)	1193, 1610, 1737, 1748, 2093, 2135
FriOI	GRGCYC	3 cut(s)	41, 768, 2091
Fsp4HI	GCNGC	5 cut(s)	245, 302, 714, 815, 1847
FspBI	CTAG	4 cut(s)	428, 671, 788, 1728
GlaI	GCGC	2 cut(s)	305, 1479
GluI	GCNGC	5 cut(s)	245, 302, 714, 815, 1847
GsuI	CTGGAG	2 cut(s)	573, 2004
HaeII	RGCGCY	1 cut(s)	1481
HaeIII	GGCC	7 cut(s)	213, 543, 766, 1064, 1379, 1824, 1868
HapII	CCGG	4 cut(s)	1827, 1884, 1976, 2013
HhaI	GCGC	2 cut(s)	306, 1480
Hin6I	GCGC	2 cut(s)	304, 1478
HinP1I	GCGC	2 cut(s)	304, 1478
HincII	GTYRAC	1 cut(s)	856
HindII	GTYRAC	1 cut(s)	856
HindIII	AAGCTT	1 cut(s)	902
HinfI	GANTC	4 cut(s)	1079, 1558, 1709, 1739
HpaI	GTTAAC	1 cut(s)	856
HpaII	CCGG	4 cut(s)	1827, 1884, 1976, 2013
HphI	GGTGA	4 cut(s)	138, 153, 685, 761
Hpy166II	GTNNAC	6 cut(s)	161, 772, 856, 980, 1099, 1285
Hpy188I	TCNGA	8 cut(s)	55, 274, 1143, 1159, 1511, 1557, 1805, 2067
Hpy188III	TCNNGA	5 cut(s)	428, 898, 992, 1073, 1424
Hpy8I	GTNNAC	6 cut(s)	161, 772, 856, 980, 1099, 1285
Hpy99I	CGWCG	2 cut(s)	2111, 2114
HpyAV	CCTTC	9 cut(s)	106, 355, 623, 744, 746, 917, 1538, 1688, 1764
HpyCH4III	ACNGT	6 cut(s)	51, 514, 845, 1289, 1569, 1941
HpyCH4IV	ACGT	2 cut(s)	1359, 1947
HpyF10VI	GCNNNNNNNGC	2 cut(s)	374, 803
HpyF3I	CTNAG	6 cut(s)	42, 1173, 1306, 1508, 2073, 2185
HpySE526I	ACGT	2 cut(s)	1359, 1947
HspAI	GCGC	2 cut(s)	304, 1478
Ksp22I	TGATCA	1 cut(s)	1791
KspAI	GTTAAC	1 cut(s)	856
Kzo9I	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
LmnI	GCTCC	5 cut(s)	252, 554, 1591, 2015, 2146
Lsp1109I	GCAGC	5 cut(s)	256, 313, 700, 826, 1858
LweI	GCATC	3 cut(s)	587, 1588, 1866
MaeI	CTAG	4 cut(s)	428, 671, 788, 1728
MaeII	ACGT	2 cut(s)	1359, 1947
MaeIII	GTNAC	5 cut(s)	233, 514, 626, 722, 1941
MalI	GATC	7 cut(s)	732, 1140, 1422, 1428, 1776, 1793, 1911
MbiI	CCGCTC	1 cut(s)	193
MboI	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
MflI	RGATCY	5 cut(s)	1138, 1420, 1426, 1774, 1909
MhlI	GDGCHC	5 cut(s)	41, 768, 982, 2020, 2091
MlyI	GAGTC	1 cut(s)	1748
Mph1103I	ATGCAT	1 cut(s)	1043
MspA1I	CMGCKG	1 cut(s)	2072
MspCI	CTTAAG	1 cut(s)	224
MspI	CCGG	4 cut(s)	1827, 1884, 1976, 2013
MspR9I	CCNGG	3 cut(s)	445, 1827, 2043
Mva1269I	GAATGC	1 cut(s)	1150
MvaI	CCWGG	2 cut(s)	445, 2043
MwoI	GCNNNNNNNGC	2 cut(s)	374, 803
NciI	CCSGG	1 cut(s)	1827
NdeII	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
NlaIV	GGNNCC	6 cut(s)	48, 766, 842, 1239, 1422, 1825
NmuCI	GTSAC	1 cut(s)	514
NsiI	ATGCAT	1 cut(s)	1043
NspI	RCATGY	4 cut(s)	223, 1540, 1649, 2029
PaeI	GCATGC	2 cut(s)	223, 1540
PagI	TCATGA	1 cut(s)	1072
PciI	ACATGT	1 cut(s)	1645
PctI	GAATGC	1 cut(s)	1150
PfeI	GAWTC	3 cut(s)	1079, 1558, 1709
PflFI	GACNNNGTC	1 cut(s)	389
PflMI	CCANNNNNTGG	1 cut(s)	1430
PfoI	TCCNGGA	1 cut(s)	443
PkrI	GCNGC	5 cut(s)	246, 303, 715, 816, 1848
PleI	GAGTC	1 cut(s)	1747
PpsI	GAGTC	1 cut(s)	1747
Ppu21I	YACGTR	1 cut(s)	1360
PscI	ACATGT	1 cut(s)	1645
Psp6I	CCWGG	2 cut(s)	443, 2041
PspGI	CCWGG	2 cut(s)	443, 2041
PspN4I	GGNNCC	6 cut(s)	48, 766, 842, 1239, 1422, 1825
PspOMI	GGGCCC	1 cut(s)	764
PspPI	GGNCC	7 cut(s)	47, 491, 764, 765, 1377, 1697, 1823
PsrI	GAACNNNNNNTAC	2 cut(s)	990, 1022
PsuI	RGATCY	5 cut(s)	1138, 1420, 1426, 1774, 1909
PsyI	GACNNNGTC	1 cut(s)	389
RsaI	GTAC	8 cut(s)	23, 94, 783, 1286, 1358, 1781, 1897, 1920
RsaNI	GTAC	8 cut(s)	22, 93, 782, 1285, 1357, 1780, 1896, 1919
SatI	GCNGC	5 cut(s)	245, 302, 714, 815, 1847
Sau3AI	GATC	7 cut(s)	730, 1138, 1420, 1426, 1774, 1791, 1909
Sau96I	GGNCC	7 cut(s)	47, 491, 764, 765, 1377, 1697, 1823
SchI	GAGTC	1 cut(s)	1748
ScrFI	CCNGG	3 cut(s)	445, 1827, 2043
SduI	GDGCHC	5 cut(s)	41, 768, 982, 2020, 2091
SfaNI	GCATC	3 cut(s)	587, 1588, 1866
SinI	GGWCC	3 cut(s)	47, 491, 1697
SmlI	CTYRAG	4 cut(s)	34, 200, 224, 1769
SmoI	CTYRAG	4 cut(s)	34, 200, 224, 1769
SphI	GCATGC	2 cut(s)	223, 1540
SsiI	CCGC	4 cut(s)	181, 191, 1967, 2070
SspI	AATATT	1 cut(s)	355
SspMI	CTAG	4 cut(s)	428, 671, 788, 1728
StyD4I	CCNGG	3 cut(s)	443, 1825, 2041
StyI	CCWWGG	1 cut(s)	1346
TaaI	ACNGT	6 cut(s)	51, 514, 845, 1289, 1569, 1941
TaiI	ACGT	2 cut(s)	1362, 1950
TaqI	TCGA	3 cut(s)	616, 921, 1210
TatI	WGTACW	2 cut(s)	92, 1284
TfiI	GAWTC	3 cut(s)	1079, 1558, 1709
TscAI	CASTG	3 cut(s)	295, 1324, 1929
TseFI	GTSAC	1 cut(s)	514
TseI	GCWGC	5 cut(s)	244, 301, 713, 814, 1846
Tsp45I	GTSAC	1 cut(s)	514
TspRI	CASTG	3 cut(s)	295, 1324, 1929
Tth111I	GACNNNGTC	1 cut(s)	389
Van91I	CCANNNNNTGG	1 cut(s)	1430
Vha464I	CTTAAG	1 cut(s)	224
VneI	GTGCAC	1 cut(s)	978
VpaK11BI	GGWCC	3 cut(s)	47, 491, 1697
XagI	CCTNNNNNAGG	1 cut(s)	1769
XapI	RAATTY	6 cut(s)	5, 331, 398, 523, 848, 2171
XbaI	TCTAGA	1 cut(s)	427
XceI	RCATGY	4 cut(s)	223, 1540, 1649, 2029
XspI	CTAG	4 cut(s)	428, 671, 788, 1728
Zsp2I	ATGCAT	1 cut(s)	1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.