Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002164

Physical Location & Seq

Genomic Coordinates Reverse (-)

38249843 .. 38258073

Gene Structure 8231 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1267500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

ATGAGATTCATGTTTACGAGTTCCGAGATTGTTTTCGTTCTTCTGCTGGGGTTTCTGGCTTTGAGTTGCTTCACTGAGTTCGAATCGAATGCTCAACTTTTGCCTCTGGAAGAAGTGAAAATTCTTGAAACAATTTCCAAAAAGTTACACAACACTCACTGGAACATCAGCCAAAGTTCTTGCCAAGATGGTGGAGCAGGCTTCTACAAATACTTCACTGATGATATTCTGAGCAATGTCACTTGCAACTGTTCCTTTCCAAGCAACACTTGCCATGTCACAATCATTGAGATGAAGGGTCTCAATTTAACTGGAGTTATACCTGAGGAACTCGGAAATCTTACACATCTGGAAGCAATTGATCTCACTCGCAATTACATCAATGGATCAATCCCTGCAACCCTCTCCCGTGCTCCTTTTCGCGCTCTGAATCTTTTGGGAAATCGACTCAGTGGTTCAATTCCCATTGATGGCTTTACTATGCTTACAGAGTTGGTGTTGGAAGATAATCAGTTTGAAGGGCGTCTTCCCCAAAACATCGGAAAGCTGACCAACTTAAAAAGACTCCTTCTTTCTGCCAACAATTTTACAGGGACTATACCAGATTCATATGGAAACCTAAAGAACTTAACTGATTTTAGGATAGATGGGAGCCAATTATCAGGGAAGATACCGAATTTTATTGGAAACTGGACCAAACTTGAAAGACTTGATATGCAAGGCACATCCTTGGAAGGCCCTATACCTTCGATCATATCTTCGTTGAAAAACTTAACTGAATTGAGAATATCTGATTTAAACGGAAGTTCACCGTTTCCTAATTTGGAAGATATGAAGGATATCGAGCTAGTGACTCTGAGAAACTGTTCAATTAGTGGTACAATCCCAAATTATTTTGGCGAGCTGAGAAAATTAAAAACATTAGACCTGAGCTTTAACAACTTGACTGGTGAAATTCCACAAACGATTCAGCGTGTTGACACTCTAGATTATATGTTTTTGACCAACAACTCACTCACCGGAGAAGTACCAACCTGGATATTGAACAGCAAATATAGCTTGGACTTGTCTTACAACAATTTTACAGGATCGCCTTCTGTTAGTTGCCAACAGTTGACTGTGAATCTAGTTTCTAGTTATTCGTCTTCAGAAAACTTATGGTGCTTAAAGAAGGATCTCCCTTGCTCGTCAAAACCGAAACACCATTCCATATTTATCAATTGCGGAGGGAGGAAGATGGAGTTCGAGGGTAATGAATACGAAGAGGACTTGAGCACTGTGGGACAATCACACTTCATTTCAACATCTGAAAAATGGGGTTATAGTAGTACAGGGGTATACATGAACAAGGATAAAGCAGATTACATCGCAACAAACACATTTTCTCTTAATGTGGATGGTCCAGACTTTTATCAAACGGCTCGCCTTTCTCCTCTCTCACTCAAGTACTATGGCCTTTGCATGTTAAAGGGTAGTTACAAAGTTCAGCTCCACTTTTCCGAAATAATGTATACTGATGACCAGACATTCAGCAGCCTTGGGAAGCGCATATTTGACATCTCAATTCAAGGGAATTTGGTTTGGAAGGATTTCAATATTATGGAGGAAGCAGGAGGTGTTGGTAAGGTTGTCGTCAAAGAATTGGATAATGTTATTGTCCACGGCAGCACTCTAGAGATTCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCCAACAGAGGTGTCTATGGGCCTCTTATATCTGCAATTACTGTGACACCAAATTTTAAGGTTGATACTGGGGGGCTATCTGCTGGTGCTATTGCCGGTATTGTAGTAGCATCATTTGTGTCTGTTGTATTGGTTTTGGTAATCCTCCGAAAGGCTGGTTACTTAGGGGGTAAAGATGAAGATGAAGAACTGCGTCGTGGGTTGGAACAAAAAACTGGTTATTTTACTCTACGACAAATTAAAGCAGCCACTGGTAACTTTGATCCTACAAACAAGATTGGTGAAGGAGGTTTTGGGCCTGTTTACAAGGGTGTACTGTCAGATGGTTCTATCATTGCTGTTAAGCAGCTCTCGGCCAAATCAAAGCAAGGCAACCGTGAATTTGTTAACGAGATAGGCATGATATCAGCTTTGCAGCACCCAAATCTCGTGAGGCTTTTCGGTTGCTGTATTGAAGGAAACCAGTTGTTGCTTATATATGAATACATGGAAAACAATAGTCTTGCGCGCGCGCTTTTTGGTCGTGAGGAACAACGTCTACATTTGGACTGGAAAACAAGAAAGAAGATATGCTTGGGGATAGCACGTGGATTAGTTTACCTTCACGAAGAATCAGTATTGAAAATTGTGCATAGGGATATAAAGGCAACCAATGTGCTGCTTGATAAGGATCTAAATGCCAAGATATCTGACTTCGGTTTAGCTAAGCTGGATGAAGAAGAAAACACGCATATCAGCACACGAATAGCTGGAACAATAGGTTATATGGCTCCTGAATACGCAATGAGAGGTTACTTAACTGACAAGGCAGATGTTTACAGTTTTGGTATCGTTGCCTTAGAAATTGTTAGTGGAAAGAGCAACACGGGTTACAAGCCAAAGGAGGAGTTCGTGTATCTTCTTGATGGGGCCTATGTTCTACAAGAGCAAGGAAACATGCTAGAACTCGTGGATCCAGATCTTGGTTCAAACTACTCTAAAACGGAGGCGATGACAATGCTGAACCTGGCGCTCTTATGCACAAATCCATCTCCCACTCTCAGACCAACCATGTCTTCTGTAGTAAGCATGCTTGAAGGCAAAACTCCAGTTCAAGCACCAATGAAGCGCGGTCCAGTGGAACAAGATGCAAGGTTTAAGGCCTTTGAGAGGCTATCACAAGACAGTCAAACAAACGTTTCCATATTCTCACAAGATAGTCATGTACGAGGCGCATCAATGGAGGGTCCGTGGGTTGATTCCTCGGTTTCTCTTCCTAGTAAGGATGAGAACATGGAACATTCCTCAACAAGCAAGCTACTTAATAATTTACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1011

Amino Acids

111.82

Weight (kDa)

5.62

Isoelectric Point (pI)

31.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	164 - 358	7.7e-14	Leucine-rich repeat region
LRR_8	PF13855	284 - 339	4.5e-06	Leucine rich repeat
Malectin	PF11721	404 - 585	4.4e-40	Malectin domain
Pkinase	PF00069	662 - 927	6.5e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	663 - 930	8.4e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53430 AT1G53430 AT1G53440
fragaria_vesca	FvH4_3g17940
malus_domestica	MD03G1247100.v1.1 MD03G1248200.v1.1 MD03G1248300.v1.1 MD03G1249100.v1.1 MD03G1249200.v1.1 MD11G1267500.v1.1
prunus_persica	Prupe.4G158000_v2.0.a1 Prupe.4G158000_v2.0.a1
pyrus_communis	pycom03g19620 pycom03g19750 pycom06g03840 pycom11g23530
rosa_chinensis	RchiOBHm_Chr5g0029911 RchiOBHm_Chr5g0029981
rosa_laevigata	RLG00000033201 RLG00000033206
rosa_multiflora	Rmu_sc0003368.1_g000014 Rmu_sc0004542.1_g000020 Rmu_sc0021047.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050050
rosa_rugosa	Rorug05G0115300 Rorug05G0115400 Rorug05G0115500 Rorug05G0115600 Rorug05G0115700 Rorug05G0115800 Rorug05G0115900 Rorug05G0116000 Rorug05G0116100 Rorug05G0116200
rosa_samantha	Rh5AG208900 Rh5AG209100 Rh5BG207700 Rh5CG231100 Rh5CG231800 Rh5DG211900 Rh5DG212500
rosa_wichuraiana	Rw5G019010 Rw5G019050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2678
AccI	GTMKAC	3 cut(s)	1338, 1511, 2254
AccII	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
AciI	CCGC	2 cut(s)	1224, 2826
AclI	AACGTT	1 cut(s)	2892
AclWI	GGATC	7 cut(s)	394, 1096, 1182, 1973, 2394, 2663, 2676
AcoI	YGGCCR	1 cut(s)	2070
AcsI	RAATTY	6 cut(s)	120, 676, 954, 1573, 1768, 2096
AcuI	CTGAAG	1 cut(s)	1131
AcvI	CACGTG	1 cut(s)	2303
AcyI	GRCGYC	1 cut(s)	523
AfaI	GTAC	6 cut(s)	880, 1029, 1330, 1448, 2031, 2922
AfiI	CCNNNNNNNGG	5 cut(s)	470, 1724, 1867, 2678, 2865
AjnI	CCWGG	2 cut(s)	1034, 2721
AjuI	GAANNNNNNNTTGG	6 cut(s)	1992, 2024, 2273, 2305, 2755, 2787
Alw21I	GWGCWC	2 cut(s)	415, 1277
Alw26I	GTCTC	1 cut(s)	305
AlwI	GGATC	7 cut(s)	394, 1096, 1182, 1973, 2394, 2663, 2676
AlwNI	CAGNNNCTG	1 cut(s)	1967
AoxI	GGCC	7 cut(s)	736, 1453, 1736, 2012, 2070, 2625, 2856
ApeKI	GCWGC	6 cut(s)	1533, 1665, 1961, 2062, 2131, 2374
ApoI	RAATTY	6 cut(s)	120, 676, 954, 1573, 1768, 2096
Asp700I	GAANNNNTTC	2 cut(s)	865, 1589
AspLEI	GCGC	9 cut(s)	425, 1548, 2224, 2226, 2228, 2230, 2728, 2826, 2930
AspS9I	GGNCC	8 cut(s)	693, 737, 1400, 1736, 2012, 2625, 2828, 2942
AsuHPI	GGTGA	4 cut(s)	801, 962, 1009, 2009
AsuII	TTCGAA	1 cut(s)	81
AvaII	GGWCC	4 cut(s)	693, 1400, 2828, 2942
AxyI	CCTNAGG	1 cut(s)	324
BamHI	GGATCC	1 cut(s)	2668
BarI	GAAGNNNNNNTAC	2 cut(s)	726, 758
BauI	CACGAG	2 cut(s)	2144, 2663
BbrPI	CACGTG	1 cut(s)	2303
BbsI	GAAGAC	3 cut(s)	518, 1137, 2763
Bbv12I	GWGCWC	2 cut(s)	415, 1277
BbvI	GCAGC	6 cut(s)	1545, 1677, 1973, 2074, 2143, 2361
BccI	CCATC	8 cut(s)	182, 464, 641, 1231, 1391, 2033, 2615, 2752
BceAI	ACGGC	2 cut(s)	1434, 1678
BcgI	CGANNNNNNTGC	4 cut(s)	71, 105, 2695, 2729
BciT130I	CCWGG	2 cut(s)	1036, 2723
BcoDI	GTCTC	1 cut(s)	305
BfaI	CTAG	7 cut(s)	848, 986, 1127, 1134, 1673, 2657, 2973
BfmI	CTRYAG	1 cut(s)	2775
BfoI	RGCGCY	1 cut(s)	2729
BglII	AGATCT	1 cut(s)	2674
BisI	GCNGC	6 cut(s)	1534, 1666, 1962, 2063, 2132, 2375
BlpI	GCTNAGC	1 cut(s)	2421
BlsI	GCNGC	6 cut(s)	1535, 1667, 1963, 2064, 2133, 2376
BmcAI	AGTACT	1 cut(s)	1448
Bme1390I	CCNGG	2 cut(s)	1036, 2723
Bme18I	GGWCC	4 cut(s)	693, 1400, 2828, 2942
BmgT120I	GGNCC	8 cut(s)	693, 737, 1400, 1736, 2012, 2625, 2828, 2942
BmiI	GGNNCC	5 cut(s)	653, 2487, 2626, 2670, 2943
BmrFI	CCNGG	2 cut(s)	1036, 2723
BmrI	ACTGGG	2 cut(s)	1699, 1794
BmsI	GCATC	3 cut(s)	1835, 2833, 2939
BmuI	ACTGGG	2 cut(s)	1699, 1794
BpiI	GAAGAC	3 cut(s)	518, 1137, 2763
BpmI	CTGGAG	2 cut(s)	333, 2787
Bpu10I	CCTNAGC	1 cut(s)	929
Bpu1102I	GCTNAGC	1 cut(s)	2421
Bpu14I	TTCGAA	1 cut(s)	81
BpuEI	CTTGAG	2 cut(s)	1291, 1427
BsaAI	YACGTR	1 cut(s)	2303
BsaBI	GATNNNNATC	2 cut(s)	2385, 2673
BsaHI	GRCGYC	1 cut(s)	523
BsaI	GGTCTC	1 cut(s)	305
BsaJI	CCNNGG	5 cut(s)	729, 1537, 1660, 2945, 2958
BsaWI	WCCGGW	1 cut(s)	1019
BsaXI	ACNNNNNCTCC	4 cut(s)	2594, 2624, 2930, 2960
Bsc4I	CCNNNNNNNGG	5 cut(s)	470, 1724, 1867, 2678, 2865
Bse118I	RCCGGY	1 cut(s)	1811
Bse21I	CCTNAGG	1 cut(s)	324
Bse3DI	GCAATG	3 cut(s)	241, 2049, 2505
Bse8I	GATNNNNATC	2 cut(s)	2385, 2673
BseBI	CCWGG	2 cut(s)	1036, 2723
BseDI	CCNNGG	5 cut(s)	729, 1537, 1660, 2945, 2958
BseGI	GGATG	4 cut(s)	725, 1402, 2434, 2986
BseJI	GATNNNNATC	2 cut(s)	2385, 2673
BseLI	CCNNNNNNNGG	5 cut(s)	470, 1724, 1867, 2678, 2865
BseMI	GCAATG	3 cut(s)	241, 2049, 2505
BseMII	CTCAG	8 cut(s)	66, 221, 315, 463, 848, 896, 920, 2770
BsePI	GCGCGC	3 cut(s)	2222, 2224, 2226
BseRI	GAGGAG	2 cut(s)	1422, 2615
BseXI	GCAGC	6 cut(s)	1545, 1677, 1973, 2074, 2143, 2361
BseYI	CCCAGC	1 cut(s)	46
Bsh1236I	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
BshFI	GGCC	7 cut(s)	738, 1455, 1738, 2014, 2072, 2627, 2858
BsiHKAI	GWGCWC	2 cut(s)	415, 1277
BsiSI	CCGG	2 cut(s)	1020, 1812
BslFI	GGGAC	2 cut(s)	607, 1296
BslI	CCNNNNNNNGG	5 cut(s)	470, 1724, 1867, 2678, 2865
BsmAI	GTCTC	1 cut(s)	305
BsmFI	GGGAC	2 cut(s)	607, 1296
BsmI	GAATGC	1 cut(s)	94
BsnI	GGCC	7 cut(s)	738, 1455, 1738, 2014, 2072, 2627, 2858
Bso31I	GGTCTC	1 cut(s)	305
Bsp119I	TTCGAA	1 cut(s)	81
Bsp1286I	GDGCHC	2 cut(s)	415, 1277
Bsp143I	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
Bsp1720I	GCTNAGC	1 cut(s)	2421
BspACI	CCGC	2 cut(s)	1224, 2826
BspANI	GGCC	7 cut(s)	738, 1455, 1738, 2014, 2072, 2627, 2858
BspCNI	CTCAG	8 cut(s)	67, 222, 316, 462, 849, 897, 921, 2769
BspFNI	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
BspLI	GGNNCC	5 cut(s)	653, 2487, 2626, 2670, 2943
BspPI	GGATC	7 cut(s)	394, 1096, 1182, 1973, 2394, 2663, 2676
BspT104I	TTCGAA	1 cut(s)	81
BspTNI	GGTCTC	1 cut(s)	305
BsrDI	GCAATG	3 cut(s)	241, 2049, 2505
BsrFI	RCCGGY	1 cut(s)	1811
BssAI	RCCGGY	1 cut(s)	1811
BssECI	CCNNGG	5 cut(s)	729, 1537, 1660, 2945, 2958
BssHII	GCGCGC	3 cut(s)	2222, 2224, 2226
BssMI	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
BssNAI	GTATAC	2 cut(s)	1339, 1512
BssNI	GRCGYC	1 cut(s)	523
BssSI	CACGAG	2 cut(s)	2144, 2663
BssT1I	CCWWGG	2 cut(s)	729, 1537
Bst1107I	GTATAC	2 cut(s)	1339, 1512
Bst2BI	CACGAG	2 cut(s)	2144, 2663
Bst2UI	CCWGG	2 cut(s)	1036, 2723
Bst6I	CTCTTC	2 cut(s)	1257, 2973
BstACI	GRCGYC	1 cut(s)	523
BstAPI	GCANNNNNTGC	1 cut(s)	270
BstBAI	YACGTR	1 cut(s)	2303
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	8 cut(s)	199, 902, 1423, 2224, 2226, 2228, 2786, 3011
BstDSI	CCRYGG	2 cut(s)	1660, 2945
BstENI	CCTNNNNNAGG	2 cut(s)	1865, 2863
BstF5I	GGATG	4 cut(s)	725, 1402, 2434, 2986
BstFNI	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
BstH2I	RGCGCY	1 cut(s)	2729
BstHHI	GCGC	9 cut(s)	425, 1548, 2224, 2226, 2228, 2230, 2728, 2826, 2930
BstKTI	GATC	9 cut(s)	364, 389, 753, 1091, 1177, 1981, 2389, 2671, 2677
BstMAI	GTCTC	1 cut(s)	305
BstMBI	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
BstMWI	GCNNNNNNNGC	2 cut(s)	270, 1056
BstNI	CCWGG	2 cut(s)	1036, 2723
BstNSI	RCATGY	3 cut(s)	1465, 2656, 2788
BstSCI	CCNGG	2 cut(s)	1034, 2721
BstSFI	CTRYAG	1 cut(s)	2775
BstUI	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
BstV1I	GCAGC	6 cut(s)	1545, 1677, 1973, 2074, 2143, 2361
BstV2I	GAAGAC	3 cut(s)	518, 1137, 2763
BstX2I	RGATCY	4 cut(s)	1174, 2386, 2668, 2674
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	4 cut(s)	1174, 2386, 2668, 2674
BstZ17I	GTATAC	2 cut(s)	1339, 1512
Bsu36I	CCTNAGG	1 cut(s)	324
BsuRI	GGCC	7 cut(s)	738, 1455, 1738, 2014, 2072, 2627, 2858
BtgI	CCRYGG	2 cut(s)	1660, 2945
BtgZI	GCGATG	2 cut(s)	1351, 2720
BtsCI	GGATG	4 cut(s)	725, 1402, 2434, 2986
BtsIMutI	CAGTG	7 cut(s)	72, 157, 216, 457, 1275, 1965, 2838
Cac8I	GCNNGC	8 cut(s)	199, 902, 1423, 2224, 2226, 2228, 2786, 3011
CaiI	CAGNNNCTG	1 cut(s)	1967
CfoI	GCGC	9 cut(s)	425, 1548, 2224, 2226, 2228, 2230, 2728, 2826, 2930
Cfr10I	RCCGGY	1 cut(s)	1811
Cfr13I	GGNCC	8 cut(s)	693, 737, 1400, 1736, 2012, 2625, 2828, 2942
CseI	GACGC	2 cut(s)	512, 1898
Csp6I	GTAC	6 cut(s)	879, 1028, 1329, 1447, 2030, 2921
CviQI	GTAC	6 cut(s)	879, 1028, 1329, 1447, 2030, 2921
DpnI	GATC	9 cut(s)	363, 388, 752, 1090, 1176, 1980, 2388, 2670, 2676
DpnII	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
DraI	TTTAAA	1 cut(s)	798
EaeI	YGGCCR	1 cut(s)	2070
Eam1104I	CTCTTC	2 cut(s)	1257, 2973
EarI	CTCTTC	2 cut(s)	1257, 2973
Eco130I	CCWWGG	2 cut(s)	729, 1537
Eco147I	AGGCCT	1 cut(s)	2858
Eco31I	GGTCTC	1 cut(s)	305
Eco32I	GATATC	3 cut(s)	841, 2121, 2403
Eco47I	GGWCC	4 cut(s)	693, 1400, 2828, 2942
Eco57I	CTGAAG	1 cut(s)	1131
Eco72I	CACGTG	1 cut(s)	2303
Eco81I	CCTNAGG	1 cut(s)	324
EcoNI	CCTNNNNNAGG	2 cut(s)	1865, 2863
EcoO109I	RGGNCCY	2 cut(s)	737, 2625
EcoRII	CCWGG	2 cut(s)	1034, 2721
EcoRV	GATATC	3 cut(s)	841, 2121, 2403
EcoT14I	CCWWGG	2 cut(s)	729, 1537
ErhI	CCWWGG	2 cut(s)	729, 1537
FalI	AAGNNNNNCTT	6 cut(s)	253, 285, 510, 542, 2273, 2305
FaqI	GGGAC	2 cut(s)	607, 1296
FauNDI	CATATG	1 cut(s)	610
FblI	GTMKAC	3 cut(s)	1338, 1511, 2254
Fnu4HI	GCNGC	6 cut(s)	1534, 1666, 1962, 2063, 2132, 2375
FokI	GGATG	4 cut(s)	712, 1409, 2441, 2993
Fsp4HI	GCNGC	6 cut(s)	1534, 1666, 1962, 2063, 2132, 2375
FspBI	CTAG	7 cut(s)	848, 986, 1127, 1134, 1673, 2657, 2973
GlaI	GCGC	9 cut(s)	424, 1547, 2223, 2225, 2227, 2229, 2727, 2825, 2929
GluI	GCNGC	6 cut(s)	1534, 1666, 1962, 2063, 2132, 2375
GsaI	CCCAGC	1 cut(s)	50
GsuI	CTGGAG	2 cut(s)	333, 2787
HaeII	RGCGCY	1 cut(s)	2729
HaeIII	GGCC	7 cut(s)	738, 1455, 1738, 2014, 2072, 2627, 2858
HapII	CCGG	2 cut(s)	1020, 1812
HgaI	GACGC	2 cut(s)	512, 1898
HhaI	GCGC	9 cut(s)	425, 1548, 2224, 2226, 2228, 2230, 2728, 2826, 2930
Hin1I	GRCGYC	1 cut(s)	523
Hin6I	GCGC	9 cut(s)	423, 1546, 2222, 2224, 2226, 2228, 2726, 2824, 2928
HinP1I	GCGC	9 cut(s)	423, 1546, 2222, 2224, 2226, 2228, 2726, 2824, 2928
HincII	GTYRAC	3 cut(s)	979, 1116, 2104
HindII	GTYRAC	3 cut(s)	979, 1116, 2104
HpaI	GTTAAC	1 cut(s)	2104
HpaII	CCGG	2 cut(s)	1020, 1812
HphI	GGTGA	4 cut(s)	801, 962, 1009, 2009
Hpy99I	CGWCG	1 cut(s)	1914
HpyCH4IV	ACGT	3 cut(s)	2251, 2302, 2892
HpyCH4V	TGCA	9 cut(s)	246, 398, 718, 1461, 1751, 2131, 2347, 2736, 2846
HpyF10VI	GCNNNNNNNGC	2 cut(s)	270, 1056
HpySE526I	ACGT	3 cut(s)	2251, 2302, 2892
Hsp92I	GRCGYC	1 cut(s)	523
HspAI	GCGC	9 cut(s)	423, 1546, 2222, 2224, 2226, 2228, 2726, 2824, 2928
KspAI	GTTAAC	1 cut(s)	2104
Kzo9I	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
LmnI	GCTCC	5 cut(s)	194, 418, 651, 1494, 2491
Lsp1109I	GCAGC	6 cut(s)	1545, 1677, 1973, 2074, 2143, 2361
LweI	GCATC	3 cut(s)	1835, 2833, 2939
MaeI	CTAG	7 cut(s)	848, 986, 1127, 1134, 1673, 2657, 2973
MaeII	ACGT	3 cut(s)	2251, 2302, 2892
MalI	GATC	9 cut(s)	363, 388, 752, 1090, 1176, 1980, 2388, 2670, 2676
MauBI	CGCGCGCG	1 cut(s)	2224
MboI	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
MfeI	CAATTG	2 cut(s)	357, 1219
MflI	RGATCY	4 cut(s)	1174, 2386, 2668, 2674
MhlI	GDGCHC	2 cut(s)	415, 1277
MlyI	GAGTC	3 cut(s)	441, 558, 847
MmeI	TCCRAC	2 cut(s)	480, 1899
MroXI	GAANNNNTTC	2 cut(s)	865, 1589
MslI	CAYNNNNRTG	1 cut(s)	290
MspI	CCGG	2 cut(s)	1020, 1812
MspR9I	CCNGG	2 cut(s)	1036, 2723
MunI	CAATTG	2 cut(s)	357, 1219
Mva1269I	GAATGC	1 cut(s)	94
MvaI	CCWGG	2 cut(s)	1036, 2723
MvnI	CGCG	5 cut(s)	423, 2224, 2226, 2228, 2826
MwoI	GCNNNNNNNGC	2 cut(s)	270, 1056
NdeI	CATATG	1 cut(s)	610
NdeII	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
NlaIV	GGNNCC	5 cut(s)	653, 2487, 2626, 2670, 2943
NmeAIII	GCCGAG	1 cut(s)	2048
NmuCI	GTSAC	4 cut(s)	238, 277, 850, 1759
NspI	RCATGY	3 cut(s)	1465, 2656, 2788
NspV	TTCGAA	1 cut(s)	81
PaeI	GCATGC	1 cut(s)	2788
PauI	GCGCGC	3 cut(s)	2222, 2224, 2226
PceI	AGGCCT	1 cut(s)	2858
PcsI	WCGNNNNNNNCGW	1 cut(s)	1193
PctI	GAATGC	1 cut(s)	94
PdmI	GAANNNNTTC	2 cut(s)	865, 1589
PfeI	GAWTC	9 cut(s)	6, 83, 430, 605, 967, 1123, 1678, 2327, 2954
PflMI	CCANNNNNTGG	1 cut(s)	2678
PkrI	GCNGC	6 cut(s)	1535, 1667, 1963, 2064, 2133, 2376
PleI	GAGTC	3 cut(s)	441, 558, 847
PmaCI	CACGTG	1 cut(s)	2303
PmlI	CACGTG	1 cut(s)	2303
PpsI	GAGTC	3 cut(s)	441, 558, 847
Ppu21I	YACGTR	1 cut(s)	2303
Psp1406I	AACGTT	1 cut(s)	2892
Psp6I	CCWGG	2 cut(s)	1034, 2721
PspCI	CACGTG	1 cut(s)	2303
PspFI	CCCAGC	1 cut(s)	46
PspGI	CCWGG	2 cut(s)	1034, 2721
PspN4I	GGNNCC	5 cut(s)	653, 2487, 2626, 2670, 2943
PspPI	GGNCC	8 cut(s)	693, 737, 1400, 1736, 2012, 2625, 2828, 2942
PsrI	GAACNNNNNNTAC	2 cut(s)	2238, 2270
PstNI	CAGNNNCTG	1 cut(s)	1967
PsuI	RGATCY	4 cut(s)	1174, 2386, 2668, 2674
PteI	GCGCGC	3 cut(s)	2222, 2224, 2226
RsaI	GTAC	6 cut(s)	880, 1029, 1330, 1448, 2031, 2922
RsaNI	GTAC	6 cut(s)	879, 1028, 1329, 1447, 2030, 2921
RseI	CAYNNNNRTG	1 cut(s)	290
SatI	GCNGC	6 cut(s)	1534, 1666, 1962, 2063, 2132, 2375
Sau3AI	GATC	9 cut(s)	361, 386, 750, 1088, 1174, 1978, 2386, 2668, 2674
Sau96I	GGNCC	8 cut(s)	693, 737, 1400, 1736, 2012, 2625, 2828, 2942
ScaI	AGTACT	1 cut(s)	1448
SchI	GAGTC	3 cut(s)	441, 558, 847
ScrFI	CCNGG	2 cut(s)	1036, 2723
SduI	GDGCHC	2 cut(s)	415, 1277
SfaNI	GCATC	3 cut(s)	1835, 2833, 2939
SfcI	CTRYAG	1 cut(s)	2775
SfuI	TTCGAA	1 cut(s)	81
SinI	GGWCC	4 cut(s)	693, 1400, 2828, 2942
SmiMI	CAYNNNNRTG	1 cut(s)	290
SmlI	CTYRAG	2 cut(s)	1270, 1442
SmoI	CTYRAG	2 cut(s)	1270, 1442
SphI	GCATGC	1 cut(s)	2788
SseBI	AGGCCT	1 cut(s)	2858
SsiI	CCGC	2 cut(s)	1224, 2826
SspI	AATATT	1 cut(s)	1597
SspMI	CTAG	7 cut(s)	848, 986, 1127, 1134, 1673, 2657, 2973
StuI	AGGCCT	1 cut(s)	2858
StyD4I	CCNGG	2 cut(s)	1034, 2721
StyI	CCWWGG	2 cut(s)	729, 1537
TaiI	ACGT	3 cut(s)	2254, 2305, 2895
TaqI	TCGA	6 cut(s)	81, 86, 445, 749, 843, 1245
TatI	WGTACW	3 cut(s)	1328, 1446, 2029
TfiI	GAWTC	9 cut(s)	6, 83, 430, 605, 967, 1123, 1678, 2327, 2954
TscAI	CASTG	7 cut(s)	79, 164, 223, 457, 1282, 1972, 2838
TseFI	GTSAC	4 cut(s)	238, 277, 850, 1759
TseI	GCWGC	6 cut(s)	1533, 1665, 1961, 2062, 2131, 2374
Tsp45I	GTSAC	4 cut(s)	238, 277, 850, 1759
TspGWI	ACGGA	3 cut(s)	816, 2714, 2934
TspRI	CASTG	7 cut(s)	79, 164, 223, 457, 1282, 1972, 2838
Van91I	CCANNNNNTGG	1 cut(s)	2678
VpaK11BI	GGWCC	4 cut(s)	693, 1400, 2828, 2942
XagI	CCTNNNNNAGG	2 cut(s)	1865, 2863
XapI	RAATTY	6 cut(s)	120, 676, 954, 1573, 1768, 2096
XbaI	TCTAGA	2 cut(s)	985, 1672
XceI	RCATGY	3 cut(s)	1465, 2656, 2788
XmiI	GTMKAC	3 cut(s)	1338, 1511, 2254
XmnI	GAANNNNTTC	2 cut(s)	865, 1589
XspI	CTAG	7 cut(s)	848, 986, 1127, 1134, 1673, 2657, 2973
ZrmI	AGTACT	1 cut(s)	1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.