pycom11g23530

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
26492178 .. 26494884
2707 bp
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UTR
Exon/CDS
Intron
pycom11g23530.5

Sequence Viewer

Length: 1794 bp
ATGGAGTTCGAGGGTAATGAATACGAAGAGGACTTGAGCACTGTGGGACAATCACACTTCATTTCAACGTCTGAAAGATGGGGTTATAGTAGTACTGGGGTATATATGAACAACGATGATGCAGATTACATCGCAAAAAACACATTTTCTCTTAATGTGGATGGTCCAGACTTTTATCAAACGGCTCGCCTTTCTCCTCTCTCACTCAAGTACTATGGCCTTTGCATGTTAAAGGGTAGTTACAAAGTTCGGCTCCACTTTTCTGAAATAATGTATACTGATGACCAGACATTCAGCAGCCTTGGGAAGCGGATATTTGACATCTCAATTCAAGGGAATTTGGTTTGGAAGGATTTCAATATTATGGAGGAAGCAGGAGGTGTTGGTAAGGTTGTCGTCAAAGAATTGGATAATGTTATTGTTAATGGCAGCACTCTAGAGATTCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCCAACAGAGGTGTCTATGGGCCTCTTATATCTGCAATTACTGTGACACCAAATTTTAAGGTTGATACTGGGGGGCTATCTGCTGGTGCTATTGCCGGTATTGCAGTAGCATCATTTGTGTCTGTTGTATTGGTTTTGGTAGTCCTCCGAAAGGCTGGTTACTTAGGGGGTAAAGACGAAGATGAAGAACTGCGTCGTGGGTTGGAACAAAAAACTGGTTATTTTACTCTACGACAAATTAAAGCAGCCACTGGTAACTTTGATCCTTCAAACAAGATTGGTGAAGGAGGTTTTGGGCCTGTTTACAAGGGTGTACTGTCAGATGGTTCTATAATTGCTGTTAAGCAGCTTTCGGCCAAATCAAAGCAAGGCAACCGTGAATTTGTTAACGAGATAGGCATGATATCAGCTTTGCAGCACCCAAATCTCGTGAGGCTTTTCGGTTGCTGTATTGAAGGAAACCAGTTGTTGCTTATATATGAATACATGGAAAACAATAGTCTTGCTCGCGCTCTTTTTGGTCGTGAGGAACAACGGCTACATTTGGACTGGAAAACAAGAAAGAAGATATGCTTGGGGATAGCACGTGGATTAGCTTACCTTCACGAAGAATCAGTATTGAAAATTGTGCATAGGGATATAAAGGCAACCAATGTGCTGCTTGATAAGGATCTAAATGCCAAGATATCTGACTTTGGTTTAGCTAAGTTGGATGAAGAAGAAAACACGCATATCAGCACACGAATAGCTGGAACAATAGGTTATATGGCTCCTGAATACGCAATGAGAGGTTACTTAACTGACAAGGCAGATGTTTACAGTTTTGGTATCGTTGCCTTAGAAATTGTTAGTGGAAAGAGCAACACGGGTTACAAGCCAAAGGAGGAGTTCGTGTATCTTCTTGATGGGGCCTATGTTCTACAAGAACAAGGAAACATGCTAGAACTCGTGGATCCAGATCTTGGTTCAAACTACTCTAAAACGGAGGCGATGACAATGCTGAACCTGGCGCTCTTATGCACAAATCCATCTCCCACTCTCAGACCAACCATGACTTCTGTAGTAAGCATGCTCGAAGGCAAAACTCCAGTTCAAGCACCAATGAAGCGCGGTCCAGTGGAACAAGATGCAAGGTTTAAGGCATTTGAGAGGCTATCACAAGACAGTCAAACCAACGTTTCCATGCTCTCACAAGATAGTCATGTACGAGGCACGTCAATGGAGGGTCCGTGGGTTGATTCCTCGGTTTCTCTTCCTAGTAAGGATGAGAATATGGAACATTCTTCAACAAGCAAGCTACTTAATAATATGTGA

Protein Analysis

598

Amino Acids

65.88

Weight (kDa)

5.5

Isoelectric Point (pI)

28.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1442
AccI GTMKAC 1 cut(s) 275
AccII CGCG 2 cut(s) 990, 1590
AciI CCGC 2 cut(s) 310, 1590
AclI AACGTT 1 cut(s) 1656
AclWI GGATC 4 cut(s) 737, 1158, 1427, 1440
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 3 cut(s) 337, 532, 860
AcvI CACGTG 1 cut(s) 1067
AfaI GTAC 4 cut(s) 94, 212, 795, 1686
AfiI CCNNNNNNNGG 3 cut(s) 488, 631, 1442
AgsI TTSAA 9 cut(s) 66, 332, 358, 750, 935, 1102, 1449, 1574, 1767
AjiI CACGTC 1 cut(s) 1695
AjnI CCWGG 1 cut(s) 1485
AjuI GAANNNNNNNTTGG 6 cut(s) 756, 788, 1037, 1069, 1519, 1551
AluBI AGCT 6 cut(s) 829, 890, 1076, 1184, 1229, 1777
AluI AGCT 6 cut(s) 829, 890, 1076, 1184, 1229, 1777
Alw21I GWGCWC 1 cut(s) 41
AlwI GGATC 4 cut(s) 737, 1158, 1427, 1440
AlwNI CAGNNNCTG 1 cut(s) 731
AoxI GGCC 5 cut(s) 217, 500, 776, 834, 1389
ApeKI GCWGC 6 cut(s) 297, 429, 725, 826, 895, 1138
ApoI RAATTY 3 cut(s) 337, 532, 860
Asp700I GAANNNNTTC 1 cut(s) 353
AspLEI GCGC 3 cut(s) 992, 1492, 1590
AspS9I GGNCC 6 cut(s) 164, 500, 776, 1389, 1592, 1706
AsuHPI GGTGA 1 cut(s) 773
AvaII GGWCC 3 cut(s) 164, 1592, 1706
BamHI GGATCC 1 cut(s) 1432
BauI CACGAG 2 cut(s) 908, 1427
BbrPI CACGTG 1 cut(s) 1067
Bbv12I GWGCWC 1 cut(s) 41
BbvI GCAGC 6 cut(s) 309, 441, 737, 838, 907, 1125
BccI CCATC 5 cut(s) 72, 155, 797, 1379, 1516
BceAI ACGGC 2 cut(s) 198, 1031
BcgI CGANNNNNNTGC 2 cut(s) 1459, 1493
BciT130I CCWGG 1 cut(s) 1487
BfaI CTAG 3 cut(s) 437, 1421, 1737
BfmI CTRYAG 1 cut(s) 1539
BfoI RGCGCY 1 cut(s) 1493
BglII AGATCT 1 cut(s) 1438
BisI GCNGC 6 cut(s) 298, 430, 726, 827, 896, 1139
BlsI GCNGC 6 cut(s) 299, 431, 727, 828, 897, 1140
BmcAI AGTACT 2 cut(s) 94, 212
Bme1390I CCNGG 1 cut(s) 1487
Bme18I GGWCC 3 cut(s) 164, 1592, 1706
BmgBI CACGTC 1 cut(s) 1695
BmgT120I GGNCC 6 cut(s) 164, 500, 776, 1389, 1592, 1706
BmiI GGNNCC 5 cut(s) 254, 1251, 1390, 1434, 1707
BmrFI CCNGG 1 cut(s) 1487
BmrI ACTGGG 3 cut(s) 105, 463, 558
BmsI GCATC 3 cut(s) 109, 599, 1597
BmuI ACTGGG 3 cut(s) 105, 463, 558
BpmI CTGGAG 1 cut(s) 1551
BpuEI CTTGAG 2 cut(s) 55, 191
BsaAI YACGTR 1 cut(s) 1067
BsaBI GATNNNNATC 2 cut(s) 1149, 1437
BsaJI CCNNGG 3 cut(s) 301, 1709, 1722
BsaXI ACNNNNNCTCC 4 cut(s) 1358, 1388, 1694, 1724
Bsc4I CCNNNNNNNGG 3 cut(s) 488, 631, 1442
Bse118I RCCGGY 1 cut(s) 575
Bse1I ACTGG 9 cut(s) 100, 458, 553, 700, 736, 943, 1034, 1568, 1595
Bse3DI GCAATG 1 cut(s) 1269
Bse8I GATNNNNATC 2 cut(s) 1149, 1437
BseBI CCWGG 1 cut(s) 1487
BseDI CCNNGG 3 cut(s) 301, 1709, 1722
BseGI GGATG 3 cut(s) 166, 1198, 1750
BseJI GATNNNNATC 2 cut(s) 1149, 1437
BseLI CCNNNNNNNGG 3 cut(s) 488, 631, 1442
BseMI GCAATG 1 cut(s) 1269
BseMII CTCAG 1 cut(s) 1534
BseNI ACTGG 9 cut(s) 100, 458, 553, 700, 736, 943, 1034, 1568, 1595
BseRI GAGGAG 2 cut(s) 186, 1379
BseXI GCAGC 6 cut(s) 309, 441, 737, 838, 907, 1125
Bsh1236I CGCG 2 cut(s) 990, 1590
BshFI GGCC 5 cut(s) 219, 502, 778, 836, 1391
BsiHKAI GWGCWC 1 cut(s) 41
BsiSI CCGG 1 cut(s) 576
BslFI GGGAC 1 cut(s) 60
BslI CCNNNNNNNGG 3 cut(s) 488, 631, 1442
BsmFI GGGAC 1 cut(s) 60
BsnI GGCC 5 cut(s) 219, 502, 778, 836, 1391
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 4 cut(s) 742, 1150, 1432, 1438
BspACI CCGC 2 cut(s) 310, 1590
BspANI GGCC 5 cut(s) 219, 502, 778, 836, 1391
BspCNI CTCAG 1 cut(s) 1533
BspFNI CGCG 2 cut(s) 990, 1590
BspLI GGNNCC 5 cut(s) 254, 1251, 1390, 1434, 1707
BspPI GGATC 4 cut(s) 737, 1158, 1427, 1440
BsrDI GCAATG 1 cut(s) 1269
BsrFI RCCGGY 1 cut(s) 575
BsrI ACTGG 9 cut(s) 100, 458, 553, 700, 736, 943, 1034, 1568, 1595
BssAI RCCGGY 1 cut(s) 575
BssECI CCNNGG 3 cut(s) 301, 1709, 1722
BssMI GATC 4 cut(s) 742, 1150, 1432, 1438
BssNAI GTATAC 1 cut(s) 276
BssSI CACGAG 2 cut(s) 908, 1427
BssT1I CCWWGG 1 cut(s) 301
Bst1107I GTATAC 1 cut(s) 276
Bst2BI CACGAG 2 cut(s) 908, 1427
Bst2UI CCWGG 1 cut(s) 1487
Bst4CI ACNGT 6 cut(s) 43, 523, 798, 857, 1301, 1646
Bst6I CTCTTC 2 cut(s) 21, 1737
BstBAI YACGTR 1 cut(s) 1067
BstC8I GCNNGC 4 cut(s) 187, 988, 1550, 1775
BstDEI CTNAG 4 cut(s) 643, 1185, 1318, 1520
BstDSI CCRYGG 1 cut(s) 1709
BstENI CCTNNNNNAGG 1 cut(s) 629
BstF5I GGATG 3 cut(s) 166, 1198, 1750
BstFNI CGCG 2 cut(s) 990, 1590
BstH2I RGCGCY 1 cut(s) 1493
BstHHI GCGC 3 cut(s) 992, 1492, 1590
BstKTI GATC 4 cut(s) 745, 1153, 1435, 1441
BstMBI GATC 4 cut(s) 742, 1150, 1432, 1438
BstMWI GCNNNNNNNGC 1 cut(s) 581
BstNI CCWGG 1 cut(s) 1487
BstNSI RCATGY 3 cut(s) 229, 1420, 1552
BstSCI CCNGG 1 cut(s) 1485
BstSFI CTRYAG 1 cut(s) 1539
BstUI CGCG 2 cut(s) 990, 1590
BstV1I GCAGC 6 cut(s) 309, 441, 737, 838, 907, 1125
BstX2I RGATCY 3 cut(s) 1150, 1432, 1438
BstYI RGATCY 3 cut(s) 1150, 1432, 1438
BstZ17I GTATAC 1 cut(s) 276
BsuRI GGCC 5 cut(s) 219, 502, 778, 836, 1391
BtgI CCRYGG 1 cut(s) 1709
BtgZI GCGATG 2 cut(s) 115, 1484
BtrI CACGTC 1 cut(s) 1695
BtsCI GGATG 3 cut(s) 166, 1198, 1750
BtsIMutI CAGTG 3 cut(s) 39, 729, 1602
Cac8I GCNNGC 4 cut(s) 187, 988, 1550, 1775
CaiI CAGNNNCTG 1 cut(s) 731
CfoI GCGC 3 cut(s) 992, 1492, 1590
Cfr10I RCCGGY 1 cut(s) 575
Cfr13I GGNCC 6 cut(s) 164, 500, 776, 1389, 1592, 1706
CseI GACGC 1 cut(s) 662
Csp6I GTAC 4 cut(s) 93, 211, 794, 1685
CviAII CATG 8 cut(s) 226, 880, 967, 1417, 1531, 1549, 1663, 1682
CviQI GTAC 4 cut(s) 93, 211, 794, 1685
DdeI CTNAG 4 cut(s) 643, 1185, 1318, 1520
DpnI GATC 4 cut(s) 744, 1152, 1434, 1440
DpnII GATC 4 cut(s) 742, 1150, 1432, 1438
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 2 cut(s) 21, 1737
EarI CTCTTC 2 cut(s) 21, 1737
Eco130I CCWWGG 1 cut(s) 301
Eco32I GATATC 2 cut(s) 885, 1167
Eco47I GGWCC 3 cut(s) 164, 1592, 1706
Eco72I CACGTG 1 cut(s) 1067
EcoNI CCTNNNNNAGG 1 cut(s) 629
EcoO109I RGGNCCY 1 cut(s) 1389
EcoRII CCWGG 1 cut(s) 1485
EcoRV GATATC 2 cut(s) 885, 1167
EcoT14I CCWWGG 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 301
FaeI CATG 8 cut(s) 229, 883, 970, 1420, 1534, 1552, 1666, 1685
FalI AAGNNNNNCTT 2 cut(s) 1037, 1069
FaqI GGGAC 1 cut(s) 60
FatI CATG 8 cut(s) 225, 879, 966, 1416, 1530, 1548, 1662, 1681
FblI GTMKAC 1 cut(s) 275
Fnu4HI GCNGC 6 cut(s) 298, 430, 726, 827, 896, 1139
FokI GGATG 3 cut(s) 173, 1205, 1757
Fsp4HI GCNGC 6 cut(s) 298, 430, 726, 827, 896, 1139
FspBI CTAG 3 cut(s) 437, 1421, 1737
GlaI GCGC 3 cut(s) 991, 1491, 1589
GluI GCNGC 6 cut(s) 298, 430, 726, 827, 896, 1139
GsuI CTGGAG 1 cut(s) 1551
HaeII RGCGCY 1 cut(s) 1493
HaeIII GGCC 5 cut(s) 219, 502, 778, 836, 1391
HapII CCGG 1 cut(s) 576
HgaI GACGC 1 cut(s) 662
HhaI GCGC 3 cut(s) 992, 1492, 1590
Hin1II CATG 8 cut(s) 229, 883, 970, 1420, 1534, 1552, 1666, 1685
Hin6I GCGC 3 cut(s) 990, 1490, 1588
HinP1I GCGC 3 cut(s) 990, 1490, 1588
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HinfI GANTC 3 cut(s) 442, 1091, 1718
HpaI GTTAAC 1 cut(s) 868
HpaII CCGG 1 cut(s) 576
HphI GGTGA 1 cut(s) 773
Hpy166II GTNNAC 5 cut(s) 276, 784, 794, 868, 1297
Hpy188I TCNGA 6 cut(s) 73, 265, 629, 802, 1171, 1523
Hpy188III TCNNGA 8 cut(s) 167, 437, 910, 1004, 1085, 1253, 1382, 1436
Hpy8I GTNNAC 5 cut(s) 276, 784, 794, 868, 1297
Hpy99I CGWCG 1 cut(s) 678
HpyAV CCTTC 6 cut(s) 343, 756, 758, 929, 1091, 1550
HpyCH4III ACNGT 6 cut(s) 43, 523, 798, 857, 1301, 1646
HpyCH4IV ACGT 4 cut(s) 68, 1066, 1656, 1694
HpyCH4V TGCA 8 cut(s) 122, 225, 515, 584, 895, 1111, 1500, 1610
HpyF10VI GCNNNNNNNGC 1 cut(s) 581
HpyF3I CTNAG 4 cut(s) 643, 1185, 1318, 1520
HpySE526I ACGT 4 cut(s) 68, 1066, 1656, 1694
Hsp92II CATG 8 cut(s) 229, 883, 970, 1420, 1534, 1552, 1666, 1685
HspAI GCGC 3 cut(s) 990, 1490, 1588
KspAI GTTAAC 1 cut(s) 868
Kzo9I GATC 4 cut(s) 742, 1150, 1432, 1438
LmnI GCTCC 2 cut(s) 258, 1255
Lsp1109I GCAGC 6 cut(s) 309, 441, 737, 838, 907, 1125
LweI GCATC 3 cut(s) 109, 599, 1597
MaeI CTAG 3 cut(s) 437, 1421, 1737
MaeII ACGT 4 cut(s) 68, 1066, 1656, 1694
MaeIII GTNAC 6 cut(s) 239, 523, 638, 734, 1271, 1349
MalI GATC 4 cut(s) 744, 1152, 1434, 1440
MboI GATC 4 cut(s) 742, 1150, 1432, 1438
MflI RGATCY 3 cut(s) 1150, 1432, 1438
MhlI GDGCHC 1 cut(s) 41
MmeI TCCRAC 2 cut(s) 663, 1170
MroXI GAANNNNTTC 1 cut(s) 353
MslI CAYNNNNRTG 1 cut(s) 1697
MspI CCGG 1 cut(s) 576
MspR9I CCNGG 1 cut(s) 1487
MvaI CCWGG 1 cut(s) 1487
MvnI CGCG 2 cut(s) 990, 1590
MwoI GCNNNNNNNGC 1 cut(s) 581
NdeII GATC 4 cut(s) 742, 1150, 1432, 1438
NlaIII CATG 8 cut(s) 229, 883, 970, 1420, 1534, 1552, 1666, 1685
NlaIV GGNNCC 5 cut(s) 254, 1251, 1390, 1434, 1707
NmuCI GTSAC 1 cut(s) 523
NspI RCATGY 3 cut(s) 229, 1420, 1552
PaeI GCATGC 1 cut(s) 1552
PdmI GAANNNNTTC 1 cut(s) 353
PfeI GAWTC 3 cut(s) 442, 1091, 1718
PflMI CCANNNNNTGG 1 cut(s) 1442
PkrI GCNGC 6 cut(s) 299, 431, 727, 828, 897, 1140
PmaCI CACGTG 1 cut(s) 1067
PmlI CACGTG 1 cut(s) 1067
Ppu21I YACGTR 1 cut(s) 1067
Psp1406I AACGTT 1 cut(s) 1656
Psp6I CCWGG 1 cut(s) 1485
PspCI CACGTG 1 cut(s) 1067
PspGI CCWGG 1 cut(s) 1485
PspN4I GGNNCC 5 cut(s) 254, 1251, 1390, 1434, 1707
PspPI GGNCC 6 cut(s) 164, 500, 776, 1389, 1592, 1706
PsrI GAACNNNNNNTAC 2 cut(s) 1002, 1034
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 3 cut(s) 1150, 1432, 1438
RsaI GTAC 4 cut(s) 94, 212, 795, 1686
RsaNI GTAC 4 cut(s) 93, 211, 794, 1685
RseI CAYNNNNRTG 1 cut(s) 1697
SatI GCNGC 6 cut(s) 298, 430, 726, 827, 896, 1139
Sau3AI GATC 4 cut(s) 742, 1150, 1432, 1438
Sau96I GGNCC 6 cut(s) 164, 500, 776, 1389, 1592, 1706
ScaI AGTACT 2 cut(s) 94, 212
ScrFI CCNGG 1 cut(s) 1487
SduI GDGCHC 1 cut(s) 41
SfaNI GCATC 3 cut(s) 109, 599, 1597
SfcI CTRYAG 1 cut(s) 1539
SinI GGWCC 3 cut(s) 164, 1592, 1706
SmiMI CAYNNNNRTG 1 cut(s) 1697
SmlI CTYRAG 2 cut(s) 34, 206
SmoI CTYRAG 2 cut(s) 34, 206
SphI GCATGC 1 cut(s) 1552
SsiI CCGC 2 cut(s) 310, 1590
SspI AATATT 1 cut(s) 361
SspMI CTAG 3 cut(s) 437, 1421, 1737
StyD4I CCNGG 1 cut(s) 1485
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 6 cut(s) 43, 523, 798, 857, 1301, 1646
TaiI ACGT 4 cut(s) 71, 1069, 1659, 1697
TaqI TCGA 2 cut(s) 9, 1554
TatI WGTACW 3 cut(s) 92, 210, 793
TfiI GAWTC 3 cut(s) 442, 1091, 1718
TscAI CASTG 3 cut(s) 46, 736, 1602
TseFI GTSAC 1 cut(s) 523
TseI GCWGC 6 cut(s) 297, 429, 725, 826, 895, 1138
Tsp45I GTSAC 1 cut(s) 523
TspDTI ATGAA 7 cut(s) 33, 49, 122, 678, 975, 1209, 1598
TspGWI ACGGA 2 cut(s) 1478, 1698
TspRI CASTG 3 cut(s) 46, 736, 1602
Van91I CCANNNNNTGG 1 cut(s) 1442
VpaK11BI GGWCC 3 cut(s) 164, 1592, 1706
XagI CCTNNNNNAGG 1 cut(s) 629
XapI RAATTY 3 cut(s) 337, 532, 860
XbaI TCTAGA 1 cut(s) 436
XceI RCATGY 3 cut(s) 229, 1420, 1552
XmiI GTMKAC 1 cut(s) 275
XmnI GAANNNNTTC 1 cut(s) 353
XspI CTAG 3 cut(s) 437, 1421, 1737
ZrmI AGTACT 2 cut(s) 94, 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.