Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002164

Physical Location & Seq

Genomic Coordinates Forward (+)

23835098 .. 23847956

Gene Structure 12859 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG212500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGGGTTCGTGATTTCGAACTCTAGGATTGGTTTGGTCTTTGCTTTTGGGTTTCTGGTGCTGATTTGCTTCACTGGGTTTGGGTCTCATGCTCAACTCATTCCTCTACAAGAAGTGAAAACTCTTGAAACGATATCCCAGAAACTCCAGAATTCTTTTTGGAACATTAGCCAAAGTTCTTGCCAAGATGGTGGATCAAGCTTTAATAAGAATATCACGGACAAGATTCTAAGCAATGTCACTTGCGACTGTTCCTTCGCAAACAACACTTGCCATGTCACAAACATAGTGATGTACGGTCTAAATTTAACTGGTATTCTACCTGAGGAATTTGGAGATCTTACATATCTACAAGAACTTGATCTCACTCTTAACTACATCAATGGATCCATTCCTACAGGCATTTCTCGCGCCCCTCTTAGGAATCTGTCTCTTACAGGAAATCGACTAAGTGGTTCTATTCCAAAGGAAATTGGTGACATTGCTACTCTTACTGAGCTTTTGTTGGAAGATAATCAACTTGAAGGGCCTCTTCCTCAAAACCTTGGGAGTTTGAGTTCCTTGAATAGACTCCTTCTTTCTGCGAATAACTTTACAGGAACAATTCCAGAATCATTTGGAAATCTAAAGAACTTAACCGATTTTAGGATAGATGGGAGCCGAATCTCAGGAAAAATACCTACTTTTATTGGAAACTGGACCAAGCTTGACAGACTGGATATGCAAGGCACGTCCATGGAAGGCCCCATTCCTTCCACCATATCTTTGCTGACAAAGTTAACTCAATTGATCATATCTGATATGAATGGATCAAGTATGCATTTTCCTAAATTGGAGGATTTGAAAATTTTGAAAACATTGATTCTGAGAAATTGCTCAATTACCGATTCTATCCCTGACTACATTGGAGATATGACAAATTTAAAGATATTGGACCTGAGCTTTAACAAGTTGACAGGTGAAGTTCCAACGACCCTTGAGAATCTTGTTGCTCTTGATTACATGTTTTTGACCAACAATTTACTGACTGGAGAAGTACCAAGCTGGATATTGAGCAACAAAAATAACTTTGATTTGTCTTACAACAATTTTAGCGGATCACCTACAGTTGGTTGTCAACACTTATCAGTGAATTTAATTTCTAGCTTTTCATCTTCACAAAGCCCGTGGTGCTTGCAGAAGGACCTCCCTTGTTCCACAAAAGCCAAATACTATTCTGTGTTTATTAATTGTGGGGGGGGTCGGATGAAATTCAATGGTAATCAGTACGAAGAGGACTTGAGCCCTGAGGGACCGTCAGACTTCATTTCCTCATTTGAGAAGTGGGGTTATAGCAGTACAGGGATTTACATGGGGAAGGAAAAAGCAGATTACACAGCAACAAACACATCACCTCTTAATGGTTCACCAATTTATCAAACTGCCCGCCTTTCCCCGCTCTCACTCAAGTATTATGGCCTTTGCATGCTTAAGGGTAGTTACAAAGTGCAGCTCCACTTCGCTGAAATAAAGTATTCAGATAATGGCACATTCACTGACCTCGGGCAGCGTATATTTGATGTGTCAATTCAAGGAAATTTGGTTTTAAAGGATTTCAATATTATGAAGGAAGCAGGAGGTGCTGGTAAAGGCATCGTCAGAGAATTTAATGTCCTTGTTAATGGTAGCACTCTAGAAATCCACTTATCCTGGAAAGGAAAAGGAACTAATGCAATACCTGATAGGGGTGGCTATGGACCTCTTATATCTGCAATTACTGTGACACCAAATTTTAAGGTTGATATTGGCCTATCTGCTGGAGCTATTGCTGGCATTTCCTTCGATATATGGGTTACTTGGGGGGCGAAGACCTTGAAGATAAAGGGCGACACGATGGAGCAGGATGCGAGGTTCAAAGCCTTTGAGAGACTATCACAAGACAGCCAAACACAAGTTTCAACTCTCTCGCAAGATAGTCTTCATGTGTACAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

657

Amino Acids

72.02

Weight (kDa)

5.55

Isoelectric Point (pI)

28.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	224 - 317	1.8e-07	Leucine-rich repeat region
LRR_8	PF13855	284 - 342	1.3e-08	Leucine rich repeat
LRR_4	PF12799	284 - 319	4.1e-06	Leucine Rich repeats (2 copies)
Malectin	PF11721	407 - 585	1.4e-37	Malectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53430 AT1G53430 AT1G53440
fragaria_vesca	FvH4_3g17940
malus_domestica	MD03G1247100.v1.1 MD03G1248200.v1.1 MD03G1248300.v1.1 MD03G1249100.v1.1 MD03G1249200.v1.1 MD11G1267500.v1.1
prunus_persica	Prupe.4G158000_v2.0.a1 Prupe.4G158000_v2.0.a1
pyrus_communis	pycom03g19620 pycom03g19750 pycom06g03840 pycom11g23530
rosa_chinensis	RchiOBHm_Chr5g0029911 RchiOBHm_Chr5g0029981
rosa_laevigata	RLG00000033201 RLG00000033206
rosa_multiflora	Rmu_sc0003368.1_g000014 Rmu_sc0004542.1_g000020 Rmu_sc0021047.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050050
rosa_rugosa	Rorug05G0115300 Rorug05G0115400 Rorug05G0115500 Rorug05G0115600 Rorug05G0115700 Rorug05G0115800 Rorug05G0115900 Rorug05G0116000 Rorug05G0116100 Rorug05G0116200
rosa_samantha	Rh5AG208900 Rh5AG209100 Rh5BG207700 Rh5CG231100 Rh5CG231800 Rh5DG211900 Rh5DG212500
rosa_wichuraiana	Rw5G019010 Rw5G019050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1438
AccII	CGCG	1 cut(s)	411
AciI	CCGC	3 cut(s)	1095, 1426, 1436
AclWI	GGATC	5 cut(s)	202, 381, 394, 817, 1105
AfaI	GTAC	5 cut(s)	296, 1038, 1268, 1339, 1967
AfiI	CCNNNNNNNGG	5 cut(s)	420, 645, 1109, 1400, 1724
AflII	CTTAAG	1 cut(s)	1469
AflIII	ACRYGT	1 cut(s)	1002
AjiI	CACGTC	1 cut(s)	732
AjnI	CCWGG	1 cut(s)	1688
AloI	GAACNNNNNNTCC	4 cut(s)	541, 573, 1874, 1906
AluBI	AGCT	8 cut(s)	201, 499, 706, 942, 1044, 1146, 1492, 1802
AluI	AGCT	8 cut(s)	201, 499, 706, 942, 1044, 1146, 1492, 1802
Alw26I	GTCTC	3 cut(s)	90, 435, 1900
AlwI	GGATC	5 cut(s)	202, 381, 394, 817, 1105
Ama87I	CYCGRG	1 cut(s)	1541
AoxI	GGCC	4 cut(s)	527, 742, 1456, 1786
ApeKI	GCWGC	2 cut(s)	1489, 1546
ArsI	GACNNNNNNTTYG	2 cut(s)	239, 271
AseI	ATTAAT	1 cut(s)	1227
AspLEI	GCGC	1 cut(s)	413
AspS9I	GGNCC	7 cut(s)	527, 699, 743, 934, 1183, 1292, 1736
AsuHPI	GGTGA	5 cut(s)	488, 971, 1092, 1383, 1398
AsuII	TTCGAA	1 cut(s)	17
AvaI	CYCGRG	1 cut(s)	1541
AvaII	GGWCC	5 cut(s)	699, 934, 1183, 1292, 1736
AxyI	CCTNAGG	2 cut(s)	324, 1287
BamHI	GGATCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	1286
BbsI	GAAGAC	2 cut(s)	1853, 1949
BbvI	GCAGC	2 cut(s)	1501, 1558
BccI	CCATC	3 cut(s)	182, 647, 1867
BcgI	CGANNNNNNTGC	2 cut(s)	1801, 1835
BciT130I	CCWGG	1 cut(s)	1690
BclI	TGATCA	1 cut(s)	789
BcoDI	GTCTC	3 cut(s)	90, 435, 1900
BfaI	CTAG	3 cut(s)	24, 1143, 1673
BfmI	CTRYAG	2 cut(s)	396, 1104
BfrI	CTTAAG	1 cut(s)	1469
BglII	AGATCT	1 cut(s)	337
BisI	GCNGC	2 cut(s)	1490, 1547
BlsI	GCNGC	2 cut(s)	1491, 1548
Bme1390I	CCNGG	1 cut(s)	1690
Bme18I	GGWCC	5 cut(s)	699, 934, 1183, 1292, 1736
BmeT110I	CYCGRG	1 cut(s)	1541
BmgBI	CACGTC	1 cut(s)	732
BmgT120I	GGNCC	7 cut(s)	527, 699, 743, 934, 1183, 1292, 1736
BmiI	GGNNCC	4 cut(s)	388, 659, 745, 1293
BmrFI	CCNGG	1 cut(s)	1690
BmrI	ACTGGG	1 cut(s)	84
BmsI	GCATC	2 cut(s)	1641, 1873
BmuI	ACTGGG	1 cut(s)	84
BpiI	GAAGAC	2 cut(s)	1853, 1949
BpmI	CTGGAG	3 cut(s)	131, 1050, 1818
Bpu10I	CCTNAGC	1 cut(s)	938
Bpu14I	TTCGAA	1 cut(s)	17
BpuEI	CTTGAG	3 cut(s)	998, 1300, 1430
BsaI	GGTCTC	1 cut(s)	90
BsaJI	CCNNGG	4 cut(s)	544, 735, 1166, 1540
BsaXI	ACNNNNNCTCC	2 cut(s)	541, 571
Bsc4I	CCNNNNNNNGG	5 cut(s)	420, 645, 1109, 1400, 1724
Bse1I	ACTGG	5 cut(s)	79, 316, 701, 720, 1033
Bse21I	CCTNAGG	2 cut(s)	324, 1287
Bse3DI	GCAATG	2 cut(s)	241, 480
BseBI	CCWGG	1 cut(s)	1690
BseDI	CCNNGG	4 cut(s)	544, 735, 1166, 1540
BseGI	GGATG	2 cut(s)	1251, 1888
BseLI	CCNNNNNNNGG	5 cut(s)	420, 645, 1109, 1400, 1724
BseMI	GCAATG	2 cut(s)	241, 480
BseMII	CTCAG	6 cut(s)	315, 486, 681, 857, 929, 1278
BseNI	ACTGG	5 cut(s)	79, 316, 701, 720, 1033
BseXI	GCAGC	2 cut(s)	1501, 1558
BsgI	GTGCAG	1 cut(s)	1508
Bsh1236I	CGCG	1 cut(s)	411
BshFI	GGCC	4 cut(s)	529, 744, 1458, 1788
BsiHKCI	CYCGRG	1 cut(s)	1541
BslFI	GGGAC	1 cut(s)	1305
BslI	CCNNNNNNNGG	5 cut(s)	420, 645, 1109, 1400, 1724
BsmAI	GTCTC	3 cut(s)	90, 435, 1900
BsmFI	GGGAC	1 cut(s)	1305
BsnI	GGCC	4 cut(s)	529, 744, 1458, 1788
Bso31I	GGTCTC	1 cut(s)	90
BsoBI	CYCGRG	1 cut(s)	1541
Bsp119I	TTCGAA	1 cut(s)	17
Bsp1286I	GDGCHC	1 cut(s)	1286
Bsp1407I	TGTACA	1 cut(s)	1965
Bsp143I	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
Bsp19I	CCATGG	1 cut(s)	735
BspACI	CCGC	3 cut(s)	1095, 1426, 1436
BspANI	GGCC	4 cut(s)	529, 744, 1458, 1788
BspCNI	CTCAG	6 cut(s)	316, 487, 680, 858, 930, 1279
BspFNI	CGCG	1 cut(s)	411
BspLI	GGNNCC	4 cut(s)	388, 659, 745, 1293
BspPI	GGATC	5 cut(s)	202, 381, 394, 817, 1105
BspT104I	TTCGAA	1 cut(s)	17
BspTI	CTTAAG	1 cut(s)	1469
BspTNI	GGTCTC	1 cut(s)	90
BsrBI	CCGCTC	1 cut(s)	1438
BsrDI	GCAATG	2 cut(s)	241, 480
BsrGI	TGTACA	1 cut(s)	1965
BsrI	ACTGG	5 cut(s)	79, 316, 701, 720, 1033
BssECI	CCNNGG	4 cut(s)	544, 735, 1166, 1540
BssMI	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
BssT1I	CCWWGG	2 cut(s)	544, 735
Bst2UI	CCWGG	1 cut(s)	1690
Bst4CI	ACNGT	5 cut(s)	251, 299, 1108, 1296, 1759
Bst6I	CTCTTC	2 cut(s)	537, 1266
BstAFI	CTTAAG	1 cut(s)	1469
BstAPI	GCANNNNNTGC	1 cut(s)	1619
BstAUI	TGTACA	1 cut(s)	1965
BstBI	TTCGAA	1 cut(s)	17
BstC8I	GCNNGC	4 cut(s)	1175, 1426, 1466, 1810
BstDEI	CTNAG	9 cut(s)	230, 324, 419, 449, 495, 667, 866, 938, 1287
BstDSI	CCRYGG	2 cut(s)	735, 1166
BstF5I	GGATG	2 cut(s)	1251, 1888
BstFNI	CGCG	1 cut(s)	411
BstHHI	GCGC	1 cut(s)	413
BstKTI	GATC	7 cut(s)	197, 340, 364, 389, 792, 812, 1100
BstMAI	GTCTC	3 cut(s)	90, 435, 1900
BstMBI	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
BstMWI	GCNNNNNNNGC	3 cut(s)	408, 1170, 1619
BstNI	CCWGG	1 cut(s)	1690
BstNSI	RCATGY	2 cut(s)	1006, 1468
BstSCI	CCNGG	1 cut(s)	1688
BstSFI	CTRYAG	2 cut(s)	396, 1104
BstUI	CGCG	1 cut(s)	411
BstV1I	GCAGC	2 cut(s)	1501, 1558
BstV2I	GAAGAC	2 cut(s)	1853, 1949
BstX2I	RGATCY	2 cut(s)	337, 386
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	2 cut(s)	337, 386
Bsu36I	CCTNAGG	2 cut(s)	324, 1287
BsuRI	GGCC	4 cut(s)	529, 744, 1458, 1788
BtgI	CCRYGG	2 cut(s)	735, 1166
BtrI	CACGTC	1 cut(s)	732
BtsCI	GGATG	2 cut(s)	1251, 1888
BtsIMutI	CAGTG	3 cut(s)	72, 1134, 1533
Cac8I	GCNNGC	4 cut(s)	1175, 1426, 1466, 1810
CfoI	GCGC	1 cut(s)	413
Cfr13I	GGNCC	7 cut(s)	527, 699, 743, 934, 1183, 1292, 1736
Csp6I	GTAC	5 cut(s)	295, 1037, 1267, 1338, 1966
CspCI	CAANNNNNGTGG	2 cut(s)	1148, 1183
CviAII	CATG	7 cut(s)	89, 275, 736, 1003, 1351, 1465, 1961
CviQI	GTAC	5 cut(s)	295, 1037, 1267, 1338, 1966
DdeI	CTNAG	9 cut(s)	230, 324, 419, 449, 495, 667, 866, 938, 1287
DpnI	GATC	7 cut(s)	196, 339, 363, 388, 791, 811, 1099
DpnII	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
DraI	TTTAAA	2 cut(s)	924, 1587
Eam1104I	CTCTTC	2 cut(s)	537, 1266
EarI	CTCTTC	2 cut(s)	537, 1266
Eco130I	CCWWGG	2 cut(s)	544, 735
Eco24I	GRGCYC	1 cut(s)	1286
Eco31I	GGTCTC	1 cut(s)	90
Eco32I	GATATC	1 cut(s)	135
Eco47I	GGWCC	5 cut(s)	699, 934, 1183, 1292, 1736
Eco81I	CCTNAGG	2 cut(s)	324, 1287
Eco88I	CYCGRG	1 cut(s)	1541
EcoO109I	RGGNCCY	3 cut(s)	527, 743, 1183
EcoRI	GAATTC	1 cut(s)	151
EcoRII	CCWGG	1 cut(s)	1688
EcoRV	GATATC	1 cut(s)	135
EcoT14I	CCWWGG	2 cut(s)	544, 735
EcoT22I	ATGCAT	1 cut(s)	822
EcoT38I	GRGCYC	1 cut(s)	1286
ErhI	CCWWGG	2 cut(s)	544, 735
FaeI	CATG	7 cut(s)	92, 278, 739, 1006, 1354, 1468, 1964
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 1941, 1973
FaqI	GGGAC	1 cut(s)	1305
FatI	CATG	7 cut(s)	88, 274, 735, 1002, 1350, 1464, 1960
FauI	CCCGC	2 cut(s)	1433, 1443
FbaI	TGATCA	1 cut(s)	789
Fnu4HI	GCNGC	2 cut(s)	1490, 1547
FokI	GGATG	2 cut(s)	1258, 1895
FriOI	GRGCYC	1 cut(s)	1286
Fsp4HI	GCNGC	2 cut(s)	1490, 1547
FspBI	CTAG	3 cut(s)	24, 1143, 1673
GlaI	GCGC	1 cut(s)	412
GluI	GCNGC	2 cut(s)	1490, 1547
GsuI	CTGGAG	3 cut(s)	131, 1050, 1818
HaeIII	GGCC	4 cut(s)	529, 744, 1458, 1788
HhaI	GCGC	1 cut(s)	413
Hin1II	CATG	7 cut(s)	92, 278, 739, 1006, 1354, 1468, 1964
Hin6I	GCGC	1 cut(s)	411
HinP1I	GCGC	1 cut(s)	411
HincII	GTYRAC	3 cut(s)	780, 954, 1118
HindII	GTYRAC	3 cut(s)	780, 954, 1118
HindIII	AAGCTT	2 cut(s)	199, 704
HinfI	GANTC	8 cut(s)	226, 424, 570, 611, 663, 862, 887, 982
HpaI	GTTAAC	1 cut(s)	780
HphI	GGTGA	5 cut(s)	488, 971, 1092, 1383, 1398
Hpy166II	GTNNAC	5 cut(s)	780, 954, 1118, 1406, 1966
Hpy188I	TCNGA	6 cut(s)	799, 867, 1245, 1300, 1519, 1640
Hpy188III	TCNNGA	7 cut(s)	10, 125, 148, 608, 669, 995, 1673
Hpy8I	GTNNAC	5 cut(s)	780, 954, 1118, 1406, 1966
HpyAV	CCTTC	9 cut(s)	265, 518, 584, 734, 762, 1174, 1351, 1600, 1828
HpyCH4III	ACNGT	5 cut(s)	251, 299, 1108, 1296, 1759
HpyCH4IV	ACGT	1 cut(s)	731
HpyCH4V	TGCA	7 cut(s)	724, 820, 1177, 1464, 1489, 1712, 1751
HpyF10VI	GCNNNNNNNGC	3 cut(s)	408, 1170, 1619
HpyF3I	CTNAG	9 cut(s)	230, 324, 419, 449, 495, 667, 866, 938, 1287
HpySE526I	ACGT	1 cut(s)	731
Hsp92II	CATG	7 cut(s)	92, 278, 739, 1006, 1354, 1468, 1964
HspAI	GCGC	1 cut(s)	411
Ksp22I	TGATCA	1 cut(s)	789
KspAI	GTTAAC	1 cut(s)	780
Kzo9I	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
LmnI	GCTCC	4 cut(s)	657, 1497, 1799, 1876
Lsp1109I	GCAGC	2 cut(s)	1501, 1558
LweI	GCATC	2 cut(s)	1641, 1873
MaeI	CTAG	3 cut(s)	24, 1143, 1673
MaeII	ACGT	1 cut(s)	731
MaeIII	GTNAC	6 cut(s)	238, 277, 476, 1478, 1759, 1831
MalI	GATC	7 cut(s)	196, 339, 363, 388, 791, 811, 1099
MbiI	CCGCTC	1 cut(s)	1438
MboI	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
MboII	GAAGA	7 cut(s)	521, 524, 1146, 1283, 1858, 1867, 1949
MfeI	CAATTG	1 cut(s)	785
MflI	RGATCY	2 cut(s)	337, 386
MhlI	GDGCHC	1 cut(s)	1286
MlyI	GAGTC	1 cut(s)	564
MmeI	TCCRAC	3 cut(s)	486, 992, 1223
Mph1103I	ATGCAT	1 cut(s)	822
MslI	CAYNNNNRTG	2 cut(s)	290, 734
MspCI	CTTAAG	1 cut(s)	1469
MspR9I	CCNGG	1 cut(s)	1690
MunI	CAATTG	1 cut(s)	785
MvaI	CCWGG	1 cut(s)	1690
MvnI	CGCG	1 cut(s)	411
MwoI	GCNNNNNNNGC	3 cut(s)	408, 1170, 1619
NcoI	CCATGG	1 cut(s)	735
NdeII	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
NlaIII	CATG	7 cut(s)	92, 278, 739, 1006, 1354, 1468, 1964
NlaIV	GGNNCC	4 cut(s)	388, 659, 745, 1293
NmuCI	GTSAC	4 cut(s)	238, 277, 476, 1759
NsiI	ATGCAT	1 cut(s)	822
NspI	RCATGY	2 cut(s)	1006, 1468
NspV	TTCGAA	1 cut(s)	17
PaeI	GCATGC	1 cut(s)	1468
PciI	ACATGT	1 cut(s)	1002
PfeI	GAWTC	7 cut(s)	226, 424, 611, 663, 862, 887, 982
PfoI	TCCNGGA	1 cut(s)	1688
PkrI	GCNGC	2 cut(s)	1491, 1548
PleI	GAGTC	1 cut(s)	564
PpsI	GAGTC	1 cut(s)	564
PpuMI	RGGWCCY	1 cut(s)	1183
PscI	ACATGT	1 cut(s)	1002
PshBI	ATTAAT	1 cut(s)	1227
Psp5II	RGGWCCY	1 cut(s)	1183
Psp6I	CCWGG	1 cut(s)	1688
PspGI	CCWGG	1 cut(s)	1688
PspN4I	GGNNCC	4 cut(s)	388, 659, 745, 1293
PspPI	GGNCC	7 cut(s)	527, 699, 743, 934, 1183, 1292, 1736
PspPPI	RGGWCCY	1 cut(s)	1183
PsuI	RGATCY	2 cut(s)	337, 386
RsaI	GTAC	5 cut(s)	296, 1038, 1268, 1339, 1967
RsaNI	GTAC	5 cut(s)	295, 1037, 1267, 1338, 1966
RseI	CAYNNNNRTG	2 cut(s)	290, 734
SatI	GCNGC	2 cut(s)	1490, 1547
Sau3AI	GATC	7 cut(s)	194, 337, 361, 386, 789, 809, 1097
Sau96I	GGNCC	7 cut(s)	527, 699, 743, 934, 1183, 1292, 1736
SchI	GAGTC	1 cut(s)	564
ScrFI	CCNGG	1 cut(s)	1690
SduI	GDGCHC	1 cut(s)	1286
SfaNI	GCATC	2 cut(s)	1641, 1873
SfcI	CTRYAG	2 cut(s)	396, 1104
SfuI	TTCGAA	1 cut(s)	17
SinI	GGWCC	5 cut(s)	699, 934, 1183, 1292, 1736
SmiMI	CAYNNNNRTG	2 cut(s)	290, 734
SmlI	CTYRAG	4 cut(s)	977, 1279, 1445, 1469
SmoI	CTYRAG	4 cut(s)	977, 1279, 1445, 1469
SphI	GCATGC	1 cut(s)	1468
SsiI	CCGC	3 cut(s)	1095, 1426, 1436
SspI	AATATT	1 cut(s)	1600
SspMI	CTAG	3 cut(s)	24, 1143, 1673
StyD4I	CCNGG	1 cut(s)	1688
StyI	CCWWGG	2 cut(s)	544, 735
TaaI	ACNGT	5 cut(s)	251, 299, 1108, 1296, 1759
TaiI	ACGT	1 cut(s)	734
TaqI	TCGA	3 cut(s)	17, 445, 1821
TatI	WGTACW	2 cut(s)	1337, 1965
TfiI	GAWTC	7 cut(s)	226, 424, 611, 663, 862, 887, 982
TscAI	CASTG	3 cut(s)	79, 1134, 1540
TseFI	GTSAC	4 cut(s)	238, 277, 476, 1759
TseI	GCWGC	2 cut(s)	1489, 1546
Tsp45I	GTSAC	4 cut(s)	238, 277, 476, 1759
TspDTI	ATGAA	6 cut(s)	818, 1140, 1262, 1294, 1619, 1949
TspGWI	ACGGA	1 cut(s)	233
TspRI	CASTG	3 cut(s)	79, 1134, 1540
Vha464I	CTTAAG	1 cut(s)	1469
VpaK11BI	GGWCC	5 cut(s)	699, 934, 1183, 1292, 1736
VspI	ATTAAT	1 cut(s)	1227
XbaI	TCTAGA	1 cut(s)	1672
XceI	RCATGY	2 cut(s)	1006, 1468
XspI	CTAG	3 cut(s)	24, 1143, 1673
Zsp2I	ATGCAT	1 cut(s)	822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.