Rorug05G0116200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
10310349 .. 10313320
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0116200.1

Sequence Viewer

Length: 1581 bp
ATGCGCAACGATGGTGATCTTGATGACCGGGACTATGAGTCCATGTTCCGCCACGTCGTTGATCGGAGCTCCGGTAATGTCGTCGATATCAATATCGAGCACTTCGGCACCGACAAACTACTCACCTTTATCACCGAAAGTGCGAGTACAATCAGGCGCATCCGACTATTTTCTTGCGATGAGGTATCAGATAAGGGATTGAGTAGAATGGCTTCGGAACTGCGGTTGTTGGAGGAACTTGACATTTCATTGTGCGCTGGTATCTCACATGAAGCTGTAAAAATGGTTGGGCGCTCTTGCCCTCTTTTGAAGTCATTCAAATTCAACAAGGAGTGGTGCAGATTCTCTGATGATGAGTCTGACTCTGACTCTGATGAGTATGGGTCTGACTTTGATGATAGTGATGACGATTATGCACATGCTCCTTTTGCTCATGCTCCTGTTGGTCATGCTCGTGTTAGAAAAGATGACAATGCAGATGCACTTGCTATAGCAGGAACGATGCAAGATTTACACCACCTCCAGCTTTATGGGAATAAGCTTACAAATGATGGCTTGAGAAAAATTCTTGATTGTTGTCCTCATCTTGAGTCACTTGATCTGCGCCTTTGCTTCAATCTCAATATGGGGATAGATTTAGAAACAAGATGTGCTGAACGGATTAAAAGGTTGTGGCTTCCCCATGATTCCATAGAGGGAAAAGAATTTATCGCTAGATCAGATGGGTACTGCTTCAAATGGATTGAACTCCCGGACAATGTTACTATGTCGATACTGTCACGGCTTGGAACAATTGATATCCTGGAGAGTGCTCAGAAGGTATGCATGAAGTGGCGCAAAATCTGCAAGGAACTGAAGTGGAACACCATAGACATGCGCAATGATAGTGCTCCCGACATTACCTTCGACTTAGATAAGATGTGCCGCCATGTTGTTGATCTTAGTTGTGGTAATTTGGTCGATGTGAATGTTGAGGACTTTATCTCGGATGAGCTCCTAGAGTATATGACTGATAGTTCGAGTGGAATCAGACGCCTGCGACTTGTGTGTTCTTATTACATATCAGATGAGGGATTGATTGAAGTTGCATCAAAACTTCCGCTGTTAGAGGACCTTGACATCTCATTATGCGGAAATTTGTCTCATAAGCCTGTGAAAGTGCTTGGGCACTCTTGCCCTCTTTTGAAATCATTCAAATTGAATAAACAATGGCACAAATATTCAGACAACTTCTTTGAAGAGATTATTGACGATGAAGGTCCTTGGAGTAAAGATGACGATGCACTTGCTATTGCAGGAACGATGCATGGTTTATACCACCTGCAGCTTTTCGGGAATCAGCTGACCAATGATGGCTTAAGGGCAATTCTTGATGGTTGTCCTCATCTTGAGTCACTAGATCTTCGCTATTGTTTCAACCTTAATCTGGAGGGAGATTTGGGAAGAAGATGCACTGAACAAATTAAAAGATTGTTGCTTCCCAAAGATTCAATTGCTGGATATGGATTTCTGCCTTCTACTGATTGGCAATCTCCCAGATCACCTAAATATATTATTGATGGGCTTTTCTCCTGGTTATGA

Protein Analysis

526

Amino Acids

59.92

Weight (kDa)

4.94

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1329
Acc16I TGCGCA 2 cut(s) 5, 878
Acc36I ACCTGC 1 cut(s) 1329
AccB1I GGYRCC 1 cut(s) 107
AciI CCGC 5 cut(s) 49, 223, 925, 1100, 1131
AcsI RAATTY 4 cut(s) 320, 564, 704, 1135
AcuI CTGAAG 1 cut(s) 875
AcyI GRCGYC 1 cut(s) 1033
AfaI GTAC 2 cut(s) 148, 728
AfiI CCNNNNNNNGG 1 cut(s) 1426
AflII CTTAAG 1 cut(s) 1357
AhdI GACNNNNNGTC 1 cut(s) 37
AjiI CACGTC 1 cut(s) 55
AjnI CCWGG 2 cut(s) 801, 1571
AluBI AGCT 7 cut(s) 69, 275, 526, 541, 994, 1327, 1342
AluI AGCT 7 cut(s) 69, 275, 526, 541, 994, 1327, 1342
Alw21I GWGCWC 5 cut(s) 71, 102, 814, 892, 996
Alw26I GTCTC 1 cut(s) 1146
ApeKI GCWGC 1 cut(s) 1324
ApoI RAATTY 4 cut(s) 320, 564, 704, 1135
ArsI GACNNNNNNTTYG 6 cut(s) 887, 919, 1000, 1032, 1217, 1249
Asp700I GAANNNNTTC 3 cut(s) 211, 314, 1190
AspLEI GCGC 7 cut(s) 6, 159, 257, 294, 606, 837, 879
AspS9I GGNCC 2 cut(s) 1111, 1259
AsuC2I CCSGG 2 cut(s) 29, 752
AsuHPI GGTGA 4 cut(s) 26, 115, 124, 1533
AvaII GGWCC 2 cut(s) 1111, 1259
BaeGI GKGCMC 1 cut(s) 1170
BanI GGYRCC 1 cut(s) 107
BanII GRGCYC 2 cut(s) 71, 996
BarI GAAGNNNNNNTAC 2 cut(s) 196, 228
BauI CACGAG 1 cut(s) 453
Bbv12I GWGCWC 5 cut(s) 71, 102, 814, 892, 996
BbvI GCAGC 1 cut(s) 1336
BccI CCATC 6 cut(s) 5, 545, 716, 1346, 1367, 1553
BceAI ACGGC 1 cut(s) 797
BcgI CGANNNNNNTGC 2 cut(s) 1268, 1302
BciT130I CCWGG 2 cut(s) 803, 1573
BcnI CCSGG 2 cut(s) 29, 752
BcoDI GTCTC 1 cut(s) 1146
BfaI CTAG 3 cut(s) 714, 998, 1397
BfmI CTRYAG 2 cut(s) 489, 1322
BfoI RGCGCY 1 cut(s) 295
BfrI CTTAAG 1 cut(s) 1357
BfuAI ACCTGC 1 cut(s) 1329
BglII AGATCT 1 cut(s) 1399
BisI GCNGC 2 cut(s) 925, 1325
BlsI GCNGC 2 cut(s) 926, 1326
Bme1390I CCNGG 4 cut(s) 29, 752, 803, 1573
Bme18I GGWCC 2 cut(s) 1111, 1259
BmeRI GACNNNNNGTC 1 cut(s) 37
BmgBI CACGTC 1 cut(s) 55
BmgT120I GGNCC 2 cut(s) 1111, 1259
BmiI GGNNCC 1 cut(s) 109
BmrFI CCNGG 4 cut(s) 29, 752, 803, 1573
BmsI GCATC 7 cut(s) 168, 469, 492, 1097, 1270, 1293, 1439
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 3 cut(s) 506, 824, 1448
BpuEI CTTGAG 3 cut(s) 577, 608, 1409
BpuMI CCSGG 2 cut(s) 29, 752
BsaBI GATNNNNATC 1 cut(s) 15
BsaHI GRCGYC 1 cut(s) 1033
BsaJI CCNNGG 1 cut(s) 1262
BsaWI WCCGGW 1 cut(s) 71
BsaXI ACNNNNNCTCC 4 cut(s) 58, 88, 504, 534
Bsc4I CCNNNNNNNGG 1 cut(s) 1426
Bse3DI GCAATG 1 cut(s) 886
Bse8I GATNNNNATC 1 cut(s) 15
BseBI CCWGG 2 cut(s) 803, 1573
BseDI CCNNGG 1 cut(s) 1262
BseGI GGATG 2 cut(s) 159, 994
BseJI GATNNNNATC 1 cut(s) 15
BseLI CCNNNNNNNGG 1 cut(s) 1426
BseMI GCAATG 1 cut(s) 886
BseMII CTCAG 1 cut(s) 827
BseSI GKGCMC 1 cut(s) 1170
BseXI GCAGC 1 cut(s) 1336
BsgI GTGCAG 1 cut(s) 358
BshNI GGYRCC 1 cut(s) 107
BsiHKAI GWGCWC 5 cut(s) 71, 102, 814, 892, 996
BsiSI CCGG 3 cut(s) 28, 72, 752
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 1426
BsmAI GTCTC 1 cut(s) 1146
BsmFI GGGAC 1 cut(s) 44
Bsp1286I GDGCHC 6 cut(s) 71, 102, 814, 892, 996, 1170
Bsp143I GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
BspACI CCGC 5 cut(s) 49, 223, 925, 1100, 1131
BspCNI CTCAG 1 cut(s) 826
BspLI GGNNCC 1 cut(s) 109
BspMAI CTGCAG 1 cut(s) 1326
BspMI ACCTGC 1 cut(s) 1329
BspT107I GGYRCC 1 cut(s) 107
BspTI CTTAAG 1 cut(s) 1357
BsrDI GCAATG 1 cut(s) 886
BssECI CCNNGG 1 cut(s) 1262
BssMI GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
BssNI GRCGYC 1 cut(s) 1033
BssSI CACGAG 1 cut(s) 453
BssT1I CCWWGG 1 cut(s) 1262
Bst2BI CACGAG 1 cut(s) 453
Bst2UI CCWGG 2 cut(s) 803, 1573
Bst4CI ACNGT 1 cut(s) 777
Bst6I CTCTTC 1 cut(s) 1233
BstACI GRCGYC 1 cut(s) 1033
BstAFI CTTAAG 1 cut(s) 1357
BstAPI GCANNNNNTGC 1 cut(s) 843
BstC8I GCNNGC 1 cut(s) 1037
BstDEI CTNAG 3 cut(s) 813, 910, 941
BstF5I GGATG 2 cut(s) 159, 994
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 7 cut(s) 6, 159, 257, 294, 606, 837, 879
BstKTI GATC 7 cut(s) 19, 64, 601, 719, 940, 1402, 1541
BstMAI GTCTC 1 cut(s) 1146
BstMBI GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
BstMWI GCNNNNNNNGC 2 cut(s) 428, 843
BstNI CCWGG 2 cut(s) 803, 1573
BstNSI RCATGY 2 cut(s) 422, 877
BstSCI CCNGG 4 cut(s) 27, 750, 801, 1571
BstSFI CTRYAG 2 cut(s) 489, 1322
BstSLI GKGCMC 1 cut(s) 1170
BstV1I GCAGC 1 cut(s) 1336
BstX2I RGATCY 1 cut(s) 1399
BstXI CCANNNNNNTGG 1 cut(s) 530
BstYI RGATCY 1 cut(s) 1399
BtgZI GCGATG 1 cut(s) 192
BtrI CACGTC 1 cut(s) 55
BtsCI GGATG 2 cut(s) 159, 994
BtsIMutI CAGTG 1 cut(s) 1452
BveI ACCTGC 1 cut(s) 1329
Cac8I GCNNGC 1 cut(s) 1037
CfoI GCGC 7 cut(s) 6, 159, 257, 294, 606, 837, 879
Cfr13I GGNCC 2 cut(s) 1111, 1259
CseI GACGC 1 cut(s) 1041
Csp6I GTAC 2 cut(s) 147, 727
CviQI GTAC 2 cut(s) 147, 727
DdeI CTNAG 3 cut(s) 813, 910, 941
DpnI GATC 7 cut(s) 18, 63, 600, 718, 939, 1401, 1540
DpnII GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
DriI GACNNNNNGTC 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 1233
Eam1105I GACNNNNNGTC 1 cut(s) 37
EarI CTCTTC 1 cut(s) 1233
EciI GGCGGA 1 cut(s) 38
Ecl136II GAGCTC 2 cut(s) 69, 994
Eco130I CCWWGG 1 cut(s) 1262
Eco24I GRGCYC 2 cut(s) 71, 996
Eco32I GATATC 2 cut(s) 88, 799
Eco47I GGWCC 2 cut(s) 1111, 1259
Eco53kI GAGCTC 2 cut(s) 69, 994
Eco57I CTGAAG 1 cut(s) 875
EcoICRI GAGCTC 2 cut(s) 69, 994
EcoO109I RGGNCCY 2 cut(s) 1111, 1259
EcoRII CCWGG 2 cut(s) 801, 1571
EcoRV GATATC 2 cut(s) 88, 799
EcoT14I CCWWGG 1 cut(s) 1262
EcoT22I ATGCAT 2 cut(s) 827, 1308
EcoT38I GRGCYC 2 cut(s) 71, 996
ErhI CCWWGG 1 cut(s) 1262
FaqI GGGAC 1 cut(s) 44
Fnu4HI GCNGC 2 cut(s) 925, 1325
FokI GGATG 2 cut(s) 146, 1001
FriOI GRGCYC 2 cut(s) 71, 996
Fsp4HI GCNGC 2 cut(s) 925, 1325
FspBI CTAG 3 cut(s) 714, 998, 1397
FspI TGCGCA 2 cut(s) 5, 878
GlaI GCGC 7 cut(s) 5, 158, 256, 293, 605, 836, 878
GluI GCNGC 2 cut(s) 925, 1325
GsuI CTGGAG 3 cut(s) 506, 824, 1448
HaeII RGCGCY 1 cut(s) 295
HapII CCGG 3 cut(s) 28, 72, 752
HgaI GACGC 1 cut(s) 1041
HhaI GCGC 7 cut(s) 6, 159, 257, 294, 606, 837, 879
Hin1I GRCGYC 1 cut(s) 1033
Hin6I GCGC 7 cut(s) 4, 157, 255, 292, 604, 835, 877
HinP1I GCGC 7 cut(s) 4, 157, 255, 292, 604, 835, 877
HindIII AAGCTT 1 cut(s) 539
HpaII CCGG 3 cut(s) 28, 72, 752
HphI GGTGA 4 cut(s) 26, 115, 124, 1533
Hpy188III TCNNGA 8 cut(s) 20, 569, 587, 893, 1333, 1370, 1388, 1427
Hpy99I CGWCG 2 cut(s) 59, 86
HpyAV CCTTC 4 cut(s) 811, 913, 1250, 1524
HpyCH4III ACNGT 1 cut(s) 777
HpyCH4IV ACGT 1 cut(s) 54
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 843
HpyF3I CTNAG 3 cut(s) 813, 910, 941
HpySE526I ACGT 1 cut(s) 54
Hsp92I GRCGYC 1 cut(s) 1033
HspAI GCGC 7 cut(s) 4, 157, 255, 292, 604, 835, 877
Kzo9I GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
LmnI GCTCC 6 cut(s) 66, 74, 427, 442, 895, 999
Lsp1109I GCAGC 1 cut(s) 1336
LweI GCATC 7 cut(s) 168, 469, 492, 1097, 1270, 1293, 1439
MaeI CTAG 3 cut(s) 714, 998, 1397
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 4 cut(s) 591, 760, 777, 1392
MalI GATC 7 cut(s) 18, 63, 600, 718, 939, 1401, 1540
MboI GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
MboII GAAGA 4 cut(s) 1250, 1394, 1455, 1458
MfeI CAATTG 2 cut(s) 792, 1491
MflI RGATCY 1 cut(s) 1399
MhlI GDGCHC 6 cut(s) 71, 102, 814, 892, 996, 1170
MlyI GAGTC 6 cut(s) 47, 356, 362, 365, 599, 1400
MmeI TCCRAC 2 cut(s) 187, 210
Mph1103I ATGCAT 2 cut(s) 827, 1308
MroXI GAANNNNTTC 3 cut(s) 211, 314, 1190
MseI TTAA 4 cut(s) 663, 1358, 1422, 1464
MslI CAYNNNNRTG 2 cut(s) 453, 872
MspA1I CMGCKG 2 cut(s) 1102, 1342
MspCI CTTAAG 1 cut(s) 1357
MspI CCGG 3 cut(s) 28, 72, 752
MspR9I CCNGG 4 cut(s) 29, 752, 803, 1573
MunI CAATTG 2 cut(s) 792, 1491
MvaI CCWGG 2 cut(s) 803, 1573
MwoI GCNNNNNNNGC 2 cut(s) 428, 843
NciI CCSGG 2 cut(s) 29, 752
NdeII GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
NlaIV GGNNCC 1 cut(s) 109
NmuCI GTSAC 3 cut(s) 591, 777, 1392
NsbI TGCGCA 2 cut(s) 5, 878
NsiI ATGCAT 2 cut(s) 827, 1308
NspI RCATGY 2 cut(s) 422, 877
PaqCI CACCTGC 1 cut(s) 1329
PdmI GAANNNNTTC 3 cut(s) 211, 314, 1190
PfeI GAWTC 5 cut(s) 342, 686, 1026, 1336, 1487
PfoI TCCNGGA 2 cut(s) 750, 801
PkrI GCNGC 2 cut(s) 926, 1326
PleI GAGTC 6 cut(s) 46, 356, 362, 364, 598, 1399
PpsI GAGTC 6 cut(s) 46, 356, 362, 364, 598, 1399
PpuMI RGGWCCY 2 cut(s) 1111, 1259
Psp124BI GAGCTC 2 cut(s) 71, 996
Psp5II RGGWCCY 2 cut(s) 1111, 1259
Psp6I CCWGG 2 cut(s) 801, 1571
PspGI CCWGG 2 cut(s) 801, 1571
PspN4I GGNNCC 1 cut(s) 109
PspPI GGNCC 2 cut(s) 1111, 1259
PspPPI RGGWCCY 2 cut(s) 1111, 1259
PstI CTGCAG 1 cut(s) 1326
PsuI RGATCY 1 cut(s) 1399
PvuII CAGCTG 1 cut(s) 1342
RsaI GTAC 2 cut(s) 148, 728
RsaNI GTAC 2 cut(s) 147, 727
RseI CAYNNNNRTG 2 cut(s) 453, 872
SacI GAGCTC 2 cut(s) 71, 996
SaqAI TTAA 4 cut(s) 663, 1358, 1422, 1464
SatI GCNGC 2 cut(s) 925, 1325
Sau3AI GATC 7 cut(s) 16, 61, 598, 716, 937, 1399, 1538
Sau96I GGNCC 2 cut(s) 1111, 1259
SchI GAGTC 6 cut(s) 47, 356, 362, 365, 599, 1400
ScrFI CCNGG 4 cut(s) 29, 752, 803, 1573
SduI GDGCHC 6 cut(s) 71, 102, 814, 892, 996, 1170
SfaNI GCATC 7 cut(s) 168, 469, 492, 1097, 1270, 1293, 1439
SfcI CTRYAG 2 cut(s) 489, 1322
SinI GGWCC 2 cut(s) 1111, 1259
SmiMI CAYNNNNRTG 2 cut(s) 453, 872
SmlI CTYRAG 4 cut(s) 556, 587, 1357, 1388
SmoI CTYRAG 4 cut(s) 556, 587, 1357, 1388
SsiI CCGC 5 cut(s) 49, 223, 925, 1100, 1131
SspI AATATT 1 cut(s) 1220
SspMI CTAG 3 cut(s) 714, 998, 1397
SstI GAGCTC 2 cut(s) 71, 996
StyD4I CCNGG 4 cut(s) 27, 750, 801, 1571
StyI CCWWGG 1 cut(s) 1262
TaaI ACNGT 1 cut(s) 777
TaiI ACGT 1 cut(s) 57
TaqI TCGA 6 cut(s) 84, 96, 770, 906, 960, 1019
TatI WGTACW 1 cut(s) 146
TauI GCSGC 1 cut(s) 927
TfiI GAWTC 5 cut(s) 342, 686, 1026, 1336, 1487
Tru1I TTAA 4 cut(s) 663, 1358, 1422, 1464
Tru9I TTAA 4 cut(s) 663, 1358, 1422, 1464
TscAI CASTG 1 cut(s) 1459
TseFI GTSAC 3 cut(s) 591, 777, 1392
TseI GCWGC 1 cut(s) 1324
Tsp45I GTSAC 3 cut(s) 591, 777, 1392
TspDTI ATGAA 4 cut(s) 237, 285, 842, 1269
TspGWI ACGGA 1 cut(s) 673
TspRI CASTG 1 cut(s) 1459
Vha464I CTTAAG 1 cut(s) 1357
VpaK11BI GGWCC 2 cut(s) 1111, 1259
XapI RAATTY 4 cut(s) 320, 564, 704, 1135
XceI RCATGY 2 cut(s) 422, 877
XmnI GAANNNNTTC 3 cut(s) 211, 314, 1190
XspI CTAG 3 cut(s) 714, 998, 1397
Zsp2I ATGCAT 2 cut(s) 827, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.