Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002164

Physical Location & Seq

Genomic Coordinates Forward (+)

24816491 .. 24823443

Gene Structure 6953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G019050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGCAAGGCACGTCCATGGAAGGCCCCATTCTTTCCACCATATCTTTGCTGACAAACTTAACTCAATTGAGGATATCTGATTTGAATGGATCAAGTATGCATTTTCCTAATTTGGAGGATTTGAAAAGTTTGGAAAGATTGATTCTGAGAAACTGCTCAATTACCGATTCTATCCCTGGCTACATTGGAGGGCTGACAAAATTAAAGGAATTGGACCTGAGCTTTAACAAGTTGACAGGTGAAGTTCCAACAACCCTTAAAAATCTTCCCCTTAAATACATGTTTTTGACCAACAATTTACTGACTGGAGAAGTACCAAGCTGGATATGGGGCAACAAATATCACTTTGATTTGTCTTACAACAATTTTAGCGGATCACTTACTACAGTTGGTTGTCAACAGTTATCAGTGAATTTAATTTCTAGCTTTTCATCTTCACAAAGCCCGTGGTGCTTGCAGAAGAACCTCCCTTGTTCCACAAAACCCAAATACTATTCTTTGTTTATTAATTGTGGGGGGGGTCGGATGAAATTCAATGGTAGTCAGTACGAAGAGGACTTGAGCCGTGAGGGACCGTCAGACTTCATTTCGTCATTTGAGAAGTGGGGTTATAGCAGTACAGGGATTTACACGGGGAAGGAAAAAGCAGATTACACAGCAACAAACACATCACCTCTTAATGGTCCACCAATTTATCAAACTGCCCGCCTTGCCCCGCTCTCACTCAAGTATTTTGGCCTTTGCATGCTTCAGGGTAGTTACAAAGTGCAGCTCCACTTCGCTGAAATAAAGTATTCAGATAATCACACATTCACTGACCTAGGGCAGCGCATATTTGATGTGTCAATTCAAGGAAATTTGGTTTTAAAGGATTTCAATATTATGAAGAAAGCAGGAGGTGCTGGTAAAGGCATCGTCGAAGAATTTGATGTCCTTGTTAATGGTAGCACTCTAGAAATCCACTTATACTGGAAAGGAAAAGGAACTAATGCAATACCTGATAGGGGTGGCTATGGACCTCTTATATCTGCAATTACTGTGACACCAAATTTTAAGGTTGATACTGGCCTATCTGCTGGAGCTATTGCTGGCATTGTAGTAGCATCATGTGTGTTGATTGTATTGATTTTGGCAGTCCTTCGATATATGGGTTACTTGGGGGGCAAAGACCTTGAAGATAAAGAACTGCGTGGGCTAGAACTACAAACAGGTTATTTCACCTTACGACAAATTAAAGCTGCCACTGGTAACTTTGATCCTTCAAATAAGATAGGTGAAGGAGGTTTTGGGCCTGTTTACAAGGGGGTACTACCAGATGGTGCTGTAATTGCTGTTAAGCAGCTCTCATCTAAATCAAAGCAAGGGAACCGTGAATTTGTTAACGAGATAGGCATGATATCTGCTTTGCAACACCCAAATCTCGTGAAGCTTTTTGGTTGCTGTATCGAAGGAAACCAGTTATTGCTTATATATGAATACATGGAAAACAATAGTCTTGCCCGTGCACTTTTTGGTCGTGAAGAACAACGGCTACACTTGGACTGGAAAACAAGAAAGAAGATATGCATGGGGATAGCGAGAGGGTTGGCCTATCTTCATGAAGAATCAAGGTTGAAAATTGTTCACAGGGATATAAAGGCAACTAATGTCCTGCTTGATAAGGATCTGAATGCCAAAATATCTGATTTTGGTTTAGCTAAGCTGGATGAAGAAGAGAACTCACATATCAGCACTCGAATAGCTGGAACAATAGGCTATATGGCACCTGAATACGCAATGAGGGGATACTTGACTGACAAAGCAGATGTGTACAGTTTTGGTATTGTTGCCTTAGAAATAGTCAGTGGAAAGAGCAACACAAATTACAGACCAAAGGAGGAGTTCGTGTATCTCCTTGATTGGGCCTATGTCCTACAAGAGCAAGGAAATATGTTAGAACTTGTGGATCCAGATCTTGGTTCAAACTACTCCAAAGAAGAGGCGATGACAGTGCTTAACTTGGCGCTCTTATGCACCAATCCATCTCCCACTCTCAGACCACCCATGTCATCTGTCGTAAGCATGCTTGAAGGTAAAAGTCAGATTCATGCACAGTTAATCAAGCGCGACACGATGGAGCAGGTTGCGAGGTTCAAAGCCTTTGAGAGACTATCACAAGACAGCCAAACACATGTTTCAACTTTCTCGCAAGATAGTCTTGTAAGAGGAACATCAATGGAAGGTCCATCGATTGATTCTTCGGTTTCTCTCGCTAGTAAGGATGAGTCCCATGAACATCCTTCAACAAGCCTACTAAAGGATCTGTATGATGTAAACTTACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

774

Amino Acids

85.61

Weight (kDa)

6.32

Isoelectric Point (pI)

29.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_4	PF12799	42 - 79	2.5e-07	Leucine Rich repeats (2 copies)
LRR_8	PF13855	43 - 101	7e-07	Leucine rich repeat
Malectin	PF11721	166 - 345	6.2e-37	Malectin domain
Pkinase	PF00069	421 - 624	5.8e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	422 - 688	9e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53430 AT1G53430 AT1G53440
fragaria_vesca	FvH4_3g17940
malus_domestica	MD03G1247100.v1.1 MD03G1248200.v1.1 MD03G1248300.v1.1 MD03G1249100.v1.1 MD03G1249200.v1.1 MD11G1267500.v1.1
prunus_persica	Prupe.4G158000_v2.0.a1 Prupe.4G158000_v2.0.a1
pyrus_communis	pycom03g19620 pycom03g19750 pycom06g03840 pycom11g23530
rosa_chinensis	RchiOBHm_Chr5g0029911 RchiOBHm_Chr5g0029981
rosa_laevigata	RLG00000033201 RLG00000033206
rosa_multiflora	Rmu_sc0003368.1_g000014 Rmu_sc0004542.1_g000020 Rmu_sc0021047.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050050
rosa_rugosa	Rorug05G0115300 Rorug05G0115400 Rorug05G0115500 Rorug05G0115600 Rorug05G0115700 Rorug05G0115800 Rorug05G0115900 Rorug05G0116000 Rorug05G0116100 Rorug05G0116200
rosa_samantha	Rh5AG208900 Rh5AG209100 Rh5BG207700 Rh5CG231100 Rh5CG231800 Rh5DG211900 Rh5DG212500
rosa_wichuraiana	Rw5G019010 Rw5G019050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2110
AccB1I	GGYRCC	1 cut(s)	1762
AccB7I	CCANNNNNTGG	1 cut(s)	1955
AccBSI	CCGCTC	1 cut(s)	718
AccII	CGCG	1 cut(s)	2106
AciI	CCGC	3 cut(s)	372, 706, 716
AclWI	GGATC	7 cut(s)	97, 382, 1250, 1671, 1940, 1953, 2307
AcsI	RAATTY	6 cut(s)	412, 530, 856, 923, 1048, 1373
AcuI	CTGAAG	1 cut(s)	734
AfaI	GTAC	5 cut(s)	315, 548, 619, 1308, 1811
AfiI	CCNNNNNNNGG	5 cut(s)	680, 1004, 1900, 1955, 2296
AflIII	ACRYGT	2 cut(s)	279, 2170
AjiI	CACGTC	1 cut(s)	12
AjnI	CCWGG	1 cut(s)	175
AjuI	GAANNNNNNNTTGG	2 cut(s)	1269, 1301
Alw21I	GWGCWC	1 cut(s)	1507
Alw26I	GTCTC	1 cut(s)	2140
Alw44I	GTGCAC	1 cut(s)	1503
AlwI	GGATC	7 cut(s)	97, 382, 1250, 1671, 1940, 1953, 2307
AoxI	GGCC	6 cut(s)	22, 736, 1066, 1289, 1587, 1902
ApaLI	GTGCAC	1 cut(s)	1503
ApeKI	GCWGC	4 cut(s)	769, 826, 1238, 1339
ApoI	RAATTY	6 cut(s)	412, 530, 856, 923, 1048, 1373
AseI	ATTAAT	1 cut(s)	507
AspA2I	CCTAGG	1 cut(s)	820
AspLEI	GCGC	3 cut(s)	831, 2005, 2106
AspS9I	GGNCC	8 cut(s)	23, 214, 572, 683, 1016, 1289, 1902, 2222
AsuHPI	GGTGA	4 cut(s)	251, 663, 1210, 1286
AvaII	GGWCC	5 cut(s)	214, 572, 683, 1016, 2222
AvrII	CCTAGG	1 cut(s)	820
BaeGI	GKGCMC	1 cut(s)	1507
BamHI	GGATCC	1 cut(s)	1945
BanI	GGYRCC	1 cut(s)	1762
BauI	CACGAG	1 cut(s)	1421
Bbv12I	GWGCWC	1 cut(s)	1507
BbvI	GCAGC	4 cut(s)	781, 838, 1225, 1351
BccI	CCATC	4 cut(s)	1310, 2029, 2107, 2233
BceAI	ACGGC	2 cut(s)	549, 1544
BcgI	CGANNNNNNTGC	2 cut(s)	1972, 2006
BciT130I	CCWGG	1 cut(s)	177
BciVI	GTATCC	1 cut(s)	1778
BcoDI	GTCTC	1 cut(s)	2140
BfaI	CTAG	5 cut(s)	423, 821, 953, 1196, 2253
BfmI	CTRYAG	1 cut(s)	384
BfoI	RGCGCY	1 cut(s)	2006
BfuAI	ACCTGC	1 cut(s)	2110
BfuI	GTATCC	1 cut(s)	1778
BglII	AGATCT	1 cut(s)	1951
BisI	GCNGC	4 cut(s)	770, 827, 1239, 1340
BlnI	CCTAGG	1 cut(s)	820
BlpI	GCTNAGC	1 cut(s)	1698
BlsI	GCNGC	4 cut(s)	771, 828, 1240, 1341
Bme1390I	CCNGG	1 cut(s)	177
Bme18I	GGWCC	5 cut(s)	214, 572, 683, 1016, 2222
BmgBI	CACGTC	1 cut(s)	12
BmgT120I	GGNCC	8 cut(s)	23, 214, 572, 683, 1016, 1289, 1902, 2222
BmiI	GGNNCC	5 cut(s)	25, 573, 1367, 1764, 1947
BmrFI	CCNGG	1 cut(s)	177
BmsI	GCATC	2 cut(s)	921, 1112
BpmI	CTGGAG	2 cut(s)	327, 1098
Bpu10I	CCTNAGC	1 cut(s)	218
Bpu1102I	GCTNAGC	1 cut(s)	1698
BpuEI	CTTGAG	2 cut(s)	580, 710
Bsa29I	ATCGAT	1 cut(s)	2228
BsaBI	GATNNNNATC	2 cut(s)	1662, 1950
BsaJI	CCNNGG	4 cut(s)	15, 175, 446, 820
BsaXI	ACNNNNNCTCC	2 cut(s)	1871, 1901
Bsc4I	CCNNNNNNNGG	5 cut(s)	680, 1004, 1900, 1955, 2296
Bse1I	ACTGG	6 cut(s)	310, 974, 1069, 1249, 1456, 1547
Bse3DI	GCAATG	1 cut(s)	1782
Bse8I	GATNNNNATC	2 cut(s)	1662, 1950
BseBI	CCWGG	1 cut(s)	177
BseCI	ATCGAT	1 cut(s)	2228
BseDI	CCNNGG	4 cut(s)	15, 175, 446, 820
BseGI	GGATG	4 cut(s)	531, 1711, 2266, 2275
BseJI	GATNNNNATC	2 cut(s)	1662, 1950
BseLI	CCNNNNNNNGG	5 cut(s)	680, 1004, 1900, 1955, 2296
BseMI	GCAATG	1 cut(s)	1782
BseMII	CTCAG	3 cut(s)	137, 209, 2047
BseNI	ACTGG	6 cut(s)	310, 974, 1069, 1249, 1456, 1547
BseRI	GAGGAG	1 cut(s)	1892
BseSI	GKGCMC	1 cut(s)	1507
BseXI	GCAGC	4 cut(s)	781, 838, 1225, 1351
BsgI	GTGCAG	1 cut(s)	788
Bsh1236I	CGCG	1 cut(s)	2106
BshFI	GGCC	6 cut(s)	24, 738, 1068, 1291, 1589, 1904
BshNI	GGYRCC	1 cut(s)	1762
BshVI	ATCGAT	1 cut(s)	2228
BsiHKAI	GWGCWC	1 cut(s)	1507
BslFI	GGGAC	2 cut(s)	585, 2251
BslI	CCNNNNNNNGG	5 cut(s)	680, 1004, 1900, 1955, 2296
BsmAI	GTCTC	1 cut(s)	2140
BsmFI	GGGAC	2 cut(s)	585, 2251
BsmI	GAATGC	1 cut(s)	1675
BsnI	GGCC	6 cut(s)	24, 738, 1068, 1291, 1589, 1904
Bsp1286I	GDGCHC	1 cut(s)	1507
Bsp1407I	TGTACA	1 cut(s)	1809
Bsp143I	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
Bsp1720I	GCTNAGC	1 cut(s)	1698
Bsp19I	CCATGG	1 cut(s)	15
BspACI	CCGC	3 cut(s)	372, 706, 716
BspANI	GGCC	6 cut(s)	24, 738, 1068, 1291, 1589, 1904
BspCNI	CTCAG	3 cut(s)	138, 210, 2046
BspDI	ATCGAT	1 cut(s)	2228
BspFNI	CGCG	1 cut(s)	2106
BspHI	TCATGA	1 cut(s)	1597
BspLI	GGNNCC	5 cut(s)	25, 573, 1367, 1764, 1947
BspMI	ACCTGC	1 cut(s)	2110
BspPI	GGATC	7 cut(s)	97, 382, 1250, 1671, 1940, 1953, 2307
BspT107I	GGYRCC	1 cut(s)	1762
BsrBI	CCGCTC	1 cut(s)	718
BsrDI	GCAATG	1 cut(s)	1782
BsrGI	TGTACA	1 cut(s)	1809
BsrI	ACTGG	6 cut(s)	310, 974, 1069, 1249, 1456, 1547
BssECI	CCNNGG	4 cut(s)	15, 175, 446, 820
BssMI	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
BssSI	CACGAG	1 cut(s)	1421
BssT1I	CCWWGG	2 cut(s)	15, 820
Bst2BI	CACGAG	1 cut(s)	1421
Bst2UI	CCWGG	1 cut(s)	177
Bst4CI	ACNGT	9 cut(s)	388, 402, 576, 1039, 1370, 1814, 1990, 2094, 2322
Bst6I	CTCTTC	3 cut(s)	546, 1707, 1971
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstAUI	TGTACA	1 cut(s)	1809
BstC8I	GCNNGC	5 cut(s)	455, 706, 746, 1090, 2063
BstDEI	CTNAG	5 cut(s)	146, 218, 1698, 1831, 2033
BstDSI	CCRYGG	2 cut(s)	15, 446
BstENI	CCTNNNNNAGG	1 cut(s)	2294
BstF5I	GGATG	4 cut(s)	531, 1711, 2266, 2275
BstFNI	CGCG	1 cut(s)	2106
BstH2I	RGCGCY	1 cut(s)	2006
BstHHI	GCGC	3 cut(s)	831, 2005, 2106
BstKTI	GATC	7 cut(s)	92, 377, 1258, 1666, 1948, 1954, 2302
BstMAI	GTCTC	1 cut(s)	2140
BstMBI	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
BstMWI	GCNNNNNNNGC	4 cut(s)	450, 710, 899, 1328
BstNI	CCWGG	1 cut(s)	177
BstNSI	RCATGY	4 cut(s)	283, 748, 2065, 2174
BstSCI	CCNGG	1 cut(s)	175
BstSFI	CTRYAG	1 cut(s)	384
BstSLI	GKGCMC	1 cut(s)	1507
BstUI	CGCG	1 cut(s)	2106
BstV1I	GCAGC	4 cut(s)	781, 838, 1225, 1351
BstX2I	RGATCY	4 cut(s)	1663, 1945, 1951, 2299
BstYI	RGATCY	4 cut(s)	1663, 1945, 1951, 2299
Bsu15I	ATCGAT	1 cut(s)	2228
BsuI	GTATCC	1 cut(s)	1778
BsuRI	GGCC	6 cut(s)	24, 738, 1068, 1291, 1589, 1904
BsuTUI	ATCGAT	1 cut(s)	2228
BtgI	CCRYGG	2 cut(s)	15, 446
BtgZI	GCGATG	1 cut(s)	1997
BtrI	CACGTC	1 cut(s)	12
BtsCI	GGATG	4 cut(s)	531, 1711, 2266, 2275
BtsIMutI	CAGTG	5 cut(s)	414, 813, 1242, 1849, 1995
BveI	ACCTGC	1 cut(s)	2110
Cac8I	GCNNGC	5 cut(s)	455, 706, 746, 1090, 2063
CciI	TCATGA	1 cut(s)	1597
CfoI	GCGC	3 cut(s)	831, 2005, 2106
Cfr13I	GGNCC	8 cut(s)	23, 214, 572, 683, 1016, 1289, 1902, 2222
ClaI	ATCGAT	1 cut(s)	2228
Csp6I	GTAC	5 cut(s)	314, 547, 618, 1307, 1810
CspCI	CAANNNNNGTGG	2 cut(s)	428, 463
CviQI	GTAC	5 cut(s)	314, 547, 618, 1307, 1810
DdeI	CTNAG	5 cut(s)	146, 218, 1698, 1831, 2033
DpnI	GATC	7 cut(s)	91, 376, 1257, 1665, 1947, 1953, 2301
DpnII	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
DraI	TTTAAA	1 cut(s)	867
Eam1104I	CTCTTC	3 cut(s)	546, 1707, 1971
EarI	CTCTTC	3 cut(s)	546, 1707, 1971
Eco130I	CCWWGG	2 cut(s)	15, 820
Eco32I	GATATC	2 cut(s)	75, 1398
Eco47I	GGWCC	5 cut(s)	214, 572, 683, 1016, 2222
Eco57I	CTGAAG	1 cut(s)	734
EcoNI	CCTNNNNNAGG	1 cut(s)	2294
EcoO109I	RGGNCCY	1 cut(s)	23
EcoRII	CCWGG	1 cut(s)	175
EcoRV	GATATC	2 cut(s)	75, 1398
EcoT14I	CCWWGG	2 cut(s)	15, 820
EcoT22I	ATGCAT	2 cut(s)	102, 1568
ErhI	CCWWGG	2 cut(s)	15, 820
FalI	AAGNNNNNCTT	2 cut(s)	2181, 2213
FaqI	GGGAC	2 cut(s)	585, 2251
FauI	CCCGC	2 cut(s)	713, 723
Fnu4HI	GCNGC	4 cut(s)	770, 827, 1239, 1340
FokI	GGATG	4 cut(s)	538, 1718, 2262, 2273
Fsp4HI	GCNGC	4 cut(s)	770, 827, 1239, 1340
FspBI	CTAG	5 cut(s)	423, 821, 953, 1196, 2253
GlaI	GCGC	3 cut(s)	830, 2004, 2105
GluI	GCNGC	4 cut(s)	770, 827, 1239, 1340
GsuI	CTGGAG	2 cut(s)	327, 1098
HaeII	RGCGCY	1 cut(s)	2006
HaeIII	GGCC	6 cut(s)	24, 738, 1068, 1291, 1589, 1904
HhaI	GCGC	3 cut(s)	831, 2005, 2106
Hin6I	GCGC	3 cut(s)	829, 2003, 2104
HinP1I	GCGC	3 cut(s)	829, 2003, 2104
HincII	GTYRAC	3 cut(s)	234, 398, 1381
HindII	GTYRAC	3 cut(s)	234, 398, 1381
HindIII	AAGCTT	1 cut(s)	1427
HinfI	GANTC	6 cut(s)	142, 167, 1604, 2083, 2234, 2264
HpaI	GTTAAC	1 cut(s)	1381
HphI	GGTGA	4 cut(s)	251, 663, 1210, 1286
Hpy166II	GTNNAC	9 cut(s)	234, 398, 686, 1297, 1381, 1505, 1624, 1810, 2314
Hpy188I	TCNGA	9 cut(s)	79, 147, 525, 580, 799, 1668, 1684, 2036, 2082
Hpy188III	TCNNGA	5 cut(s)	953, 1423, 1517, 1598, 1949
Hpy8I	GTNNAC	9 cut(s)	234, 398, 686, 1297, 1381, 1505, 1624, 1810, 2314
Hpy99I	CGWCG	1 cut(s)	920
HpyAV	CCTTC	9 cut(s)	14, 631, 1148, 1269, 1271, 1442, 2063, 2213, 2289
HpyCH4III	ACNGT	9 cut(s)	388, 402, 576, 1039, 1370, 1814, 1990, 2094, 2322
HpyCH4IV	ACGT	1 cut(s)	11
HpyF10VI	GCNNNNNNNGC	4 cut(s)	450, 710, 899, 1328
HpyF3I	CTNAG	5 cut(s)	146, 218, 1698, 1831, 2033
HpySE526I	ACGT	1 cut(s)	11
HspAI	GCGC	3 cut(s)	829, 2003, 2104
KspAI	GTTAAC	1 cut(s)	1381
Kzo9I	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
LmnI	GCTCC	3 cut(s)	777, 1079, 2116
Lsp1109I	GCAGC	4 cut(s)	781, 838, 1225, 1351
LweI	GCATC	2 cut(s)	921, 1112
MaeI	CTAG	5 cut(s)	423, 821, 953, 1196, 2253
MaeII	ACGT	1 cut(s)	11
MaeIII	GTNAC	4 cut(s)	758, 1039, 1151, 1247
MalI	GATC	7 cut(s)	91, 376, 1257, 1665, 1947, 1953, 2301
MbiI	CCGCTC	1 cut(s)	718
MboI	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
MfeI	CAATTG	1 cut(s)	65
MflI	RGATCY	4 cut(s)	1663, 1945, 1951, 2299
MhlI	GDGCHC	1 cut(s)	1507
MlyI	GAGTC	1 cut(s)	2273
MmeI	TCCRAC	2 cut(s)	272, 503
Mph1103I	ATGCAT	2 cut(s)	102, 1568
MslI	CAYNNNNRTG	1 cut(s)	14
MspR9I	CCNGG	1 cut(s)	177
MunI	CAATTG	1 cut(s)	65
Mva1269I	GAATGC	1 cut(s)	1675
MvaI	CCWGG	1 cut(s)	177
MvnI	CGCG	1 cut(s)	2106
MwoI	GCNNNNNNNGC	4 cut(s)	450, 710, 899, 1328
NcoI	CCATGG	1 cut(s)	15
NdeII	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
NlaIV	GGNNCC	5 cut(s)	25, 573, 1367, 1764, 1947
NmuCI	GTSAC	1 cut(s)	1039
NsiI	ATGCAT	2 cut(s)	102, 1568
NspI	RCATGY	4 cut(s)	283, 748, 2065, 2174
PaeI	GCATGC	2 cut(s)	748, 2065
PagI	TCATGA	1 cut(s)	1597
PciI	ACATGT	2 cut(s)	279, 2170
PctI	GAATGC	1 cut(s)	1675
PfeI	GAWTC	5 cut(s)	142, 167, 1604, 2083, 2234
PflMI	CCANNNNNTGG	1 cut(s)	1955
PkrI	GCNGC	4 cut(s)	771, 828, 1240, 1341
PleI	GAGTC	1 cut(s)	2272
PpsI	GAGTC	1 cut(s)	2272
PscI	ACATGT	2 cut(s)	279, 2170
PshBI	ATTAAT	1 cut(s)	507
Psp6I	CCWGG	1 cut(s)	175
PspGI	CCWGG	1 cut(s)	175
PspN4I	GGNNCC	5 cut(s)	25, 573, 1367, 1764, 1947
PspPI	GGNCC	8 cut(s)	23, 214, 572, 683, 1016, 1289, 1902, 2222
PsrI	GAACNNNNNNTAC	2 cut(s)	1515, 1547
PsuI	RGATCY	4 cut(s)	1663, 1945, 1951, 2299
RsaI	GTAC	5 cut(s)	315, 548, 619, 1308, 1811
RsaNI	GTAC	5 cut(s)	314, 547, 618, 1307, 1810
RseI	CAYNNNNRTG	1 cut(s)	14
SatI	GCNGC	4 cut(s)	770, 827, 1239, 1340
Sau3AI	GATC	7 cut(s)	89, 374, 1255, 1663, 1945, 1951, 2299
Sau96I	GGNCC	8 cut(s)	23, 214, 572, 683, 1016, 1289, 1902, 2222
SchI	GAGTC	1 cut(s)	2273
ScrFI	CCNGG	1 cut(s)	177
SduI	GDGCHC	1 cut(s)	1507
SfaNI	GCATC	2 cut(s)	921, 1112
SfcI	CTRYAG	1 cut(s)	384
SinI	GGWCC	5 cut(s)	214, 572, 683, 1016, 2222
SmiMI	CAYNNNNRTG	1 cut(s)	14
SmlI	CTYRAG	2 cut(s)	559, 725
SmoI	CTYRAG	2 cut(s)	559, 725
SphI	GCATGC	2 cut(s)	748, 2065
SsiI	CCGC	3 cut(s)	372, 706, 716
SspI	AATATT	1 cut(s)	880
SspMI	CTAG	5 cut(s)	423, 821, 953, 1196, 2253
StyD4I	CCNGG	1 cut(s)	175
StyI	CCWWGG	2 cut(s)	15, 820
TaaI	ACNGT	9 cut(s)	388, 402, 576, 1039, 1370, 1814, 1990, 2094, 2322
TaiI	ACGT	1 cut(s)	14
TaqI	TCGA	5 cut(s)	918, 1141, 1446, 1735, 2228
TatI	WGTACW	2 cut(s)	617, 1809
TfiI	GAWTC	5 cut(s)	142, 167, 1604, 2083, 2234
TscAI	CASTG	5 cut(s)	414, 820, 1249, 1849, 1995
TseFI	GTSAC	1 cut(s)	1039
TseI	GCWGC	4 cut(s)	769, 826, 1238, 1339
Tsp45I	GTSAC	1 cut(s)	1039
TspRI	CASTG	5 cut(s)	414, 820, 1249, 1849, 1995
Van91I	CCANNNNNTGG	1 cut(s)	1955
VneI	GTGCAC	1 cut(s)	1503
VpaK11BI	GGWCC	5 cut(s)	214, 572, 683, 1016, 2222
VspI	ATTAAT	1 cut(s)	507
XagI	CCTNNNNNAGG	1 cut(s)	2294
XapI	RAATTY	6 cut(s)	412, 530, 856, 923, 1048, 1373
XbaI	TCTAGA	1 cut(s)	952
XceI	RCATGY	4 cut(s)	283, 748, 2065, 2174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	324
XmaJI	CCTAGG	1 cut(s)	820
XspI	CTAG	5 cut(s)	423, 821, 953, 1196, 2253
Zsp2I	ATGCAT	2 cut(s)	102, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.