AT1G64830

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
24091137 .. 24092579
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G64830.1

Sequence Viewer

Length: 1296 bp
ATGGCTTCTCTAATTTTTGCAACTCTCTTGTCCCTTTTGTTACTCTCAAACGTGAACGCCTATCCGAAAGATGGCTTCACCATTGATCTGATCCACCGCGATTCTCCCAAATCACCGTTCTACAATTCCGCCGAAACCTCTTCACAACGTATGAGAAATGCTATCCGCCGCTCCGCTCGCAGTACACTCCAATTCAGCAATGATGATGCTTCACCAAACTCACCACAATCTTTTATCACTTCCAACCGCGGTGAGTATCTCATGAACATATCCATCGGGACGCCCCCGGTCCCGATACTAGCGATTGCGGATACTGGCAGCGACTTGATTTGGACTCAATGCAATCCTTGCGAAGATTGTTACCAGCAGACATCTCCACTCTTTGATCCTAAAGAATCTTCCACATATAGAAAGGTTTCTTGCTCCTCAAGCCAATGTCGTGCCCTAGAAGATGCTTCTTGTTCCACAGATGAAAACACTTGTTCTTATACGATTACATACGGTGACAATTCATACACCAAAGGTGACGTTGCCGTTGACACCGTGACGATGGGATCTAGCGGTCGCCGCCCTGTGTCACTCAGAAACATGATCATTGGTTGCGGACACGAAAACACTGGAACCTTTGACCCGGCTGGCTCAGGGATCATCGGACTCGGAGGAGGATCTACATCGTTGGTCTCACAACTCAGGAAATCCATCAACGGTAAATTCTCCTATTGTTTAGTACCTTTCACCTCTGAAACCGGCCTAACGAGCAAGATCAACTTTGGAACAAACGGCATTGTCTCGGGCGATGGAGTTGTGTCCACCTCCATGGTCAAGAAAGATCCCGCCACATACTATTTCCTAAACCTAGAAGCCATTAGCGTGGGAAGCAAGAAAATTCAATTCACAAGCACAATCTTTGGGACCGGAGAAGGAAACATTGTTATCGACTCCGGTACCACTCTAACTCTATTGCCATCCAATTTTTACTATGAGCTTGAATCTGTCGTTGCTTCTACAATCAAAGCAGAGCGAGTGCAAGATCCCGATGGTATTCTGAGTCTTTGTTATAGAGACAGCTCTAGTTTTAAAGTTCCAGACATAACTGTTCATTTCAAAGGAGGTGATGTGAAACTCGGCAATTTGAATACGTTTGTGGCAGTGTCTGAAGATGTGTCTTGCTTTGCATTTGCTGCAAATGAACAACTAACCATTTTTGGAAACTTGGCGCAAATGAACTTCCTTGTTGGATACGACACTGTTTCTGGAACTGTGTCGTTTAAGAAAACGGATTGCTCTCAAATGTAG

Protein Analysis

431

Amino Acids

46.34

Weight (kDa)

5.06

Isoelectric Point (pI)

35.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 85 - 139 3.8e-07 Eukaryotic aspartyl protease
TAXi_N PF14543 86 - 258 1.3e-56 Xylanase inhibitor N-terminal
Asp PF00026 141 - 423 3.2e-12 Eukaryotic aspartyl protease
TAXi_C PF14541 282 - 425 7.4e-28 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 944
AccB1I GGYRCC 1 cut(s) 944
AccBSI CCGCTC 2 cut(s) 171, 176
AccII CGCG 2 cut(s) 99, 249
AclWI GGATC 7 cut(s) 85, 380, 562, 653, 673, 824, 1025
AcsI RAATTY 2 cut(s) 710, 885
AcuI CTGAAG 1 cut(s) 1176
AcyI GRCGYC 1 cut(s) 281
AfaI GTAC 3 cut(s) 184, 729, 946
AfiI CCNNNNNNNGG 1 cut(s) 71
AgsI TTSAA 4 cut(s) 890, 989, 1105, 1135
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 2 cut(s) 985, 1068
AluI AGCT 2 cut(s) 985, 1068
Alw26I GTCTC 3 cut(s) 685, 793, 1056
AlwI GGATC 7 cut(s) 85, 380, 562, 653, 673, 824, 1025
AlwNI CAGNNNCTG 1 cut(s) 1154
Ama87I CYCGRG 1 cut(s) 790
AoxI GGCC 1 cut(s) 748
ApeKI GCWGC 2 cut(s) 318, 1181
ApoI RAATTY 2 cut(s) 710, 885
Asp700I GAANNNNTTC 1 cut(s) 415
Asp718I GGTACC 1 cut(s) 944
AspLEI GCGC 1 cut(s) 1219
AspS9I GGNCC 2 cut(s) 289, 912
AsuC2I CCSGG 2 cut(s) 287, 632
AsuHPI GGTGA 9 cut(s) 70, 105, 204, 213, 263, 515, 536, 727, 1124
AvaI CYCGRG 1 cut(s) 790
AvaII GGWCC 2 cut(s) 289, 912
BaeGI GKGCMC 1 cut(s) 445
BaeI ACNNNNGTAYC 2 cut(s) 928, 961
BanI GGYRCC 1 cut(s) 944
BbvI GCAGC 2 cut(s) 330, 1168
BccI CCATC 7 cut(s) 65, 281, 544, 707, 791, 973, 1031
BceAI ACGGC 2 cut(s) 518, 796
BciVI GTATCC 2 cut(s) 304, 1232
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 2 cut(s) 287, 632
BcoDI GTCTC 3 cut(s) 685, 793, 1056
BfaI CTAG 5 cut(s) 299, 446, 558, 857, 1071
BfuI GTATCC 2 cut(s) 304, 1232
BisI GCNGC 4 cut(s) 169, 319, 568, 1182
BlsI GCNGC 4 cut(s) 170, 320, 569, 1183
Bme1390I CCNGG 2 cut(s) 287, 632
Bme18I GGWCC 2 cut(s) 289, 912
BmeT110I CYCGRG 1 cut(s) 790
BmgT120I GGNCC 2 cut(s) 289, 912
BmiI GGNNCC 4 cut(s) 291, 622, 913, 946
BmrFI CCNGG 2 cut(s) 287, 632
BmsI GCATC 2 cut(s) 196, 442
Bpu10I CCTNAGC 1 cut(s) 640
BpuEI CTTGAG 1 cut(s) 412
BpuMI CCSGG 2 cut(s) 287, 632
BsaBI GATNNNNATC 1 cut(s) 670
BsaHI GRCGYC 1 cut(s) 281
BsaI GGTCTC 1 cut(s) 685
BsaJI CCNNGG 3 cut(s) 247, 285, 816
BsaWI WCCGGW 2 cut(s) 914, 941
BsaXI ACNNNNNCTCC 2 cut(s) 1101, 1131
Bsc4I CCNNNNNNNGG 1 cut(s) 71
Bse118I RCCGGY 1 cut(s) 746
Bse1I ACTGG 2 cut(s) 319, 622
Bse3DI GCAATG 1 cut(s) 205
Bse8I GATNNNNATC 1 cut(s) 670
BseDI CCNNGG 3 cut(s) 247, 285, 816
BseGI GGATG 1 cut(s) 965
BseJI GATNNNNATC 1 cut(s) 670
BseLI CCNNNNNNNGG 1 cut(s) 71
BseMI GCAATG 1 cut(s) 205
BseMII CTCAG 4 cut(s) 595, 654, 703, 1037
BseNI ACTGG 2 cut(s) 319, 622
BseRI GAGGAG 2 cut(s) 415, 675
BseSI GKGCMC 1 cut(s) 445
BseXI GCAGC 2 cut(s) 330, 1168
Bsh1236I CGCG 2 cut(s) 99, 249
Bsh1285I CGRYCG 1 cut(s) 565
BshFI GGCC 1 cut(s) 750
BshNI GGYRCC 1 cut(s) 944
BsiEI CGRYCG 1 cut(s) 565
BsiHKCI CYCGRG 1 cut(s) 790
BsiSI CCGG 5 cut(s) 287, 632, 747, 915, 942
BslFI GGGAC 4 cut(s) 16, 275, 292, 925
BslI CCNNNNNNNGG 1 cut(s) 71
BsmAI GTCTC 3 cut(s) 685, 793, 1056
BsmFI GGGAC 4 cut(s) 16, 275, 292, 925
BsnI GGCC 1 cut(s) 750
Bso31I GGTCTC 1 cut(s) 685
BsoBI CYCGRG 1 cut(s) 790
Bsp1286I GDGCHC 1 cut(s) 445
Bsp19I CCATGG 1 cut(s) 816
BspANI GGCC 1 cut(s) 750
BspCNI CTCAG 4 cut(s) 594, 653, 702, 1038
BspFNI CGCG 2 cut(s) 99, 249
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 4 cut(s) 291, 622, 913, 946
BspPI GGATC 7 cut(s) 85, 380, 562, 653, 673, 824, 1025
BspT107I GGYRCC 1 cut(s) 944
BspTNI GGTCTC 1 cut(s) 685
BsrBI CCGCTC 2 cut(s) 171, 176
BsrDI GCAATG 1 cut(s) 205
BsrFI RCCGGY 1 cut(s) 746
BsrI ACTGG 2 cut(s) 319, 622
BssAI RCCGGY 1 cut(s) 746
BssECI CCNNGG 3 cut(s) 247, 285, 816
BssNI GRCGYC 1 cut(s) 281
BssT1I CCWWGG 1 cut(s) 816
Bst4CI ACNGT 7 cut(s) 117, 503, 544, 707, 1096, 1249, 1261
Bst6I CTCTTC 1 cut(s) 145
BstACI GRCGYC 1 cut(s) 281
BstAPI GCANNNNNTGC 2 cut(s) 348, 1181
BstC8I GCNNGC 2 cut(s) 178, 637
BstDEI CTNAG 4 cut(s) 581, 640, 689, 1046
BstDSI CCRYGG 2 cut(s) 247, 816
BstF5I GGATG 1 cut(s) 965
BstFNI CGCG 2 cut(s) 99, 249
BstHHI GCGC 1 cut(s) 1219
BstMAI GTCTC 3 cut(s) 685, 793, 1056
BstMCI CGRYCG 1 cut(s) 565
BstMWI GCNNNNNNNGC 7 cut(s) 177, 348, 429, 567, 756, 876, 1181
BstSCI CCNGG 2 cut(s) 285, 630
BstSLI GKGCMC 1 cut(s) 445
BstUI CGCG 2 cut(s) 99, 249
BstV1I GCAGC 2 cut(s) 330, 1168
BstX2I RGATCY 4 cut(s) 554, 665, 829, 1030
BstXI CCANNNNNNTGG 2 cut(s) 817, 871
BstYI RGATCY 4 cut(s) 554, 665, 829, 1030
BsuI GTATCC 2 cut(s) 304, 1232
BsuRI GGCC 1 cut(s) 750
BtgI CCRYGG 2 cut(s) 247, 816
BtgZI GCGATG 1 cut(s) 810
BtsCI GGATG 1 cut(s) 965
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 3 cut(s) 615, 1155, 1245
Cac8I GCNNGC 2 cut(s) 178, 637
CaiI CAGNNNCTG 1 cut(s) 1154
CciI TCATGA 1 cut(s) 261
CfoI GCGC 1 cut(s) 1219
Cfr10I RCCGGY 1 cut(s) 746
Cfr13I GGNCC 2 cut(s) 289, 912
Cfr42I CCGCGG 1 cut(s) 250
CseI GACGC 1 cut(s) 289
Csp6I GTAC 3 cut(s) 183, 728, 945
CviAII CATG 3 cut(s) 262, 589, 817
CviJI RGCY 9 cut(s) 5, 75, 432, 635, 639, 750, 863, 985, 1068
CviKI_1 RGCY 9 cut(s) 5, 75, 432, 635, 639, 750, 863, 985, 1068
CviQI GTAC 3 cut(s) 183, 728, 945
DdeI CTNAG 4 cut(s) 581, 640, 689, 1046
DraI TTTAAA 1 cut(s) 1078
Eam1104I CTCTTC 1 cut(s) 145
EarI CTCTTC 1 cut(s) 145
EciI GGCGGA 2 cut(s) 118, 155
Eco130I CCWWGG 1 cut(s) 816
Eco31I GGTCTC 1 cut(s) 685
Eco47I GGWCC 2 cut(s) 289, 912
Eco57I CTGAAG 1 cut(s) 1176
Eco88I CYCGRG 1 cut(s) 790
EcoT14I CCWWGG 1 cut(s) 816
ErhI CCWWGG 1 cut(s) 816
FaeI CATG 3 cut(s) 265, 592, 820
FalI AAGNNNNNCTT 2 cut(s) 752, 784
FaqI GGGAC 4 cut(s) 16, 275, 292, 925
FatI CATG 3 cut(s) 261, 588, 816
FauI CCCGC 1 cut(s) 841
FbaI TGATCA 1 cut(s) 591
Fnu4HI GCNGC 4 cut(s) 169, 319, 568, 1182
FokI GGATG 1 cut(s) 952
Fsp4HI GCNGC 4 cut(s) 169, 319, 568, 1182
FspBI CTAG 5 cut(s) 299, 446, 558, 857, 1071
GlaI GCGC 1 cut(s) 1218
GluI GCNGC 4 cut(s) 169, 319, 568, 1182
HaeIII GGCC 1 cut(s) 750
HapII CCGG 5 cut(s) 287, 632, 747, 915, 942
HgaI GACGC 1 cut(s) 289
HhaI GCGC 1 cut(s) 1219
Hin1I GRCGYC 1 cut(s) 281
Hin1II CATG 3 cut(s) 265, 592, 820
Hin6I GCGC 1 cut(s) 1217
HinP1I GCGC 1 cut(s) 1217
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HinfI GANTC 7 cut(s) 101, 334, 395, 654, 938, 989, 1048
HpaII CCGG 5 cut(s) 287, 632, 747, 915, 942
HphI GGTGA 9 cut(s) 70, 105, 204, 213, 263, 515, 536, 727, 1124
Hpy166II GTNNAC 4 cut(s) 55, 185, 538, 810
Hpy188I TCNGA 8 cut(s) 66, 90, 584, 653, 659, 742, 1047, 1156
Hpy188III TCNNGA 8 cut(s) 262, 277, 292, 691, 823, 1034, 1085, 1254
Hpy8I GTNNAC 4 cut(s) 55, 185, 538, 810
HpyAV CCTTC 1 cut(s) 914
HpyCH4III ACNGT 7 cut(s) 117, 503, 544, 707, 1096, 1249, 1261
HpyCH4IV ACGT 4 cut(s) 51, 148, 528, 1139
HpyCH4V TGCA 5 cut(s) 20, 342, 1027, 1175, 1184
HpyF10VI GCNNNNNNNGC 7 cut(s) 177, 348, 429, 567, 756, 876, 1181
HpyF3I CTNAG 4 cut(s) 581, 640, 689, 1046
HpySE526I ACGT 4 cut(s) 51, 148, 528, 1139
Hsp92I GRCGYC 1 cut(s) 281
Hsp92II CATG 3 cut(s) 265, 592, 820
HspAI GCGC 1 cut(s) 1217
KpnI GGTACC 1 cut(s) 948
Ksp22I TGATCA 1 cut(s) 591
KspI CCGCGG 1 cut(s) 250
LmnI GCTCC 2 cut(s) 176, 428
Lsp1109I GCAGC 2 cut(s) 330, 1168
LweI GCATC 2 cut(s) 196, 442
MaeI CTAG 5 cut(s) 299, 446, 558, 857, 1071
MaeII ACGT 4 cut(s) 51, 148, 528, 1139
MaeIII GTNAC 6 cut(s) 39, 359, 503, 524, 544, 576
MbiI CCGCTC 2 cut(s) 171, 176
MboII GAAGA 5 cut(s) 132, 365, 390, 461, 1169
MflI RGATCY 4 cut(s) 554, 665, 829, 1030
MhlI GDGCHC 1 cut(s) 445
MluCI AATT 9 cut(s) 12, 124, 191, 508, 710, 885, 890, 970, 1129
MlyI GAGTC 4 cut(s) 328, 648, 932, 1057
MmeI TCCRAC 2 cut(s) 267, 1216
MnlI CCTC 7 cut(s) 148, 436, 653, 656, 748, 823, 1103
MroXI GAANNNNTTC 1 cut(s) 415
MseI TTAA 2 cut(s) 1077, 1269
MslI CAYNNNNRTG 2 cut(s) 815, 869
MspA1I CMGCKG 1 cut(s) 249
MspI CCGG 5 cut(s) 287, 632, 747, 915, 942
MspR9I CCNGG 2 cut(s) 287, 632
MvnI CGCG 2 cut(s) 99, 249
MwoI GCNNNNNNNGC 7 cut(s) 177, 348, 429, 567, 756, 876, 1181
NciI CCSGG 2 cut(s) 287, 632
NcoI CCATGG 1 cut(s) 816
NlaIII CATG 3 cut(s) 265, 592, 820
NlaIV GGNNCC 4 cut(s) 291, 622, 913, 946
NmeAIII GCCGAG 1 cut(s) 1104
NmuCI GTSAC 4 cut(s) 503, 524, 544, 576
PagI TCATGA 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 415
PfeI GAWTC 3 cut(s) 101, 395, 989
PkrI GCNGC 4 cut(s) 170, 320, 569, 1183
PleI GAGTC 4 cut(s) 328, 648, 932, 1056
PpsI GAGTC 4 cut(s) 328, 648, 932, 1056
PspN4I GGNNCC 4 cut(s) 291, 622, 913, 946
PspPI GGNCC 2 cut(s) 289, 912
PstNI CAGNNNCTG 1 cut(s) 1154
PsuI RGATCY 4 cut(s) 554, 665, 829, 1030
RsaI GTAC 3 cut(s) 184, 729, 946
RsaNI GTAC 3 cut(s) 183, 728, 945
RseI CAYNNNNRTG 2 cut(s) 815, 869
SacII CCGCGG 1 cut(s) 250
SaqAI TTAA 2 cut(s) 1077, 1269
SatI GCNGC 4 cut(s) 169, 319, 568, 1182
Sau96I GGNCC 2 cut(s) 289, 912
SchI GAGTC 4 cut(s) 328, 648, 932, 1057
ScrFI CCNGG 2 cut(s) 287, 632
SduI GDGCHC 1 cut(s) 445
SfaNI GCATC 2 cut(s) 196, 442
Sfr303I CCGCGG 1 cut(s) 250
SgrBI CCGCGG 1 cut(s) 250
SinI GGWCC 2 cut(s) 289, 912
SmiMI CAYNNNNRTG 2 cut(s) 815, 869
SmlI CTYRAG 1 cut(s) 427
SmoI CTYRAG 1 cut(s) 427
Sse9I AATT 9 cut(s) 12, 124, 191, 508, 710, 885, 890, 970, 1129
SspMI CTAG 5 cut(s) 299, 446, 558, 857, 1071
StyD4I CCNGG 2 cut(s) 285, 630
StyI CCWWGG 1 cut(s) 816
TaaI ACNGT 7 cut(s) 117, 503, 544, 707, 1096, 1249, 1261
TaiI ACGT 4 cut(s) 54, 151, 531, 1142
TaqI TCGA 1 cut(s) 936
TasI AATT 9 cut(s) 12, 124, 191, 508, 710, 885, 890, 970, 1129
TatI WGTACW 1 cut(s) 182
TauI GCSGC 2 cut(s) 171, 570
TfiI GAWTC 3 cut(s) 101, 395, 989
Tru1I TTAA 2 cut(s) 1077, 1269
Tru9I TTAA 2 cut(s) 1077, 1269
TscAI CASTG 3 cut(s) 622, 1155, 1252
TseFI GTSAC 4 cut(s) 503, 524, 544, 576
TseI GCWGC 2 cut(s) 318, 1181
Tsp45I GTSAC 4 cut(s) 503, 524, 544, 576
TspDTI ATGAA 6 cut(s) 278, 486, 501, 1088, 1203, 1238
TspGWI ACGGA 1 cut(s) 1292
TspRI CASTG 3 cut(s) 622, 1155, 1252
VpaK11BI GGWCC 2 cut(s) 289, 912
XapI RAATTY 2 cut(s) 710, 885
XmnI GAANNNNTTC 1 cut(s) 415
XspI CTAG 5 cut(s) 299, 446, 558, 857, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.