Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001618

Physical Location & Seq

Genomic Coordinates Reverse (-)

8726133 .. 8727534

Gene Structure 1402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G050200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGAGCTTCATACAATCTTCTCAAAGAGCCATGGGAGCCCTTTCGACAAACCCTTTGTTCTCCATGGCAATAGCTCTCGTGTTATCTGCCACTTATTTGTTCCTTTTCTCTCTTATACAAGCTGATCGTAATGGTGGCTTCAGTGTGGAGCTTATTCACCGTGACTCTCCCATGTCTCCTCTCTATAATCCTTCAGAAACAGTCACAACAAGAAGTTTGTCACTACACAGTTTCTTATGTTATGGAGAGGGATCCTACAGCAAGGGAATTCTAGCCACAGAAAGAGTCACTTTTGGCTCCACTACTGGCCAACCAATTTCACTCCCAAAAATGGTCTTTGGTTGTGGACAAGACAATGAAGACCTCTTCAACAAGAATGGATCAGGCATGATCGGCCTCGCACGTGGATCGGTGTCTCTTATCTCTCAAATGAGTTCTTCAGTTGATGGGAAATTCTCCTACTGCCTTGTGCAGGCCTTTTCAGGACTTAACTCTTCAAGCAAAATGAGCTCTGGCAGTGAAGCTGTGGTTTCTGGAGACCGAAAATCTTTTTATTATCTAAGGCTGGAAGCAATGAGTGTGGGACGTAAGAGATTGCAATATAACGGTTCACTGGGCTCCTCATTTGCTCCAGCAGAGGGCAATATTATAGACGATTCACTGAGCTCCTCATTTGCTCCAGCAGAGGGCAATATTATAGTCAATTCCGGGACTACGTTGACATTGCTACCACAAGACTTTTACAATAAGCTGGAATTGGCAGTGAGTAAGGCCGTATGGTCAAGACGTGCAAGTGATCCTCGTCGCTTCCTAAGCCCTTGCTACCGGACCAAATCCGGTGCTATCAAAGCTCCGTTAAAATACTGCACATTTCACCGACCTATTAATCGAAGTGTCGCTGTCTTCGGCAACATGGCACAAACGAATTTCTTGATAGGCTATGACCTTAAGAAAGACACTGTTTCTTTTAAGCCTACTGATTGCACCAAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

332

Amino Acids

35.89

Weight (kDa)

9.33

Isoelectric Point (pI)

51.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64830 AT5G33340
fragaria_vesca	FvH4_7g07620 FvH4_7g07650 FvH4_7g07651
malus_domestica	MD02G1235000.v1.1 MD02G1235700.v1.1 MD07G1079900.v1.1 MD07G1080000.v1.1 MD14G1073600.v1.1 MD14G1073700.v1.1
prunus_persica	Prupe.2G103100_v2.0.a1 Prupe.7G050200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342781 RchiOBHm_Chr1g0342851 RchiOBHm_Chr1g0342861 RchiOBHm_Chr1g0343021 RchiOBHm_Chr1g0343031 RchiOBHm_Chr4g0401311
rosa_laevigata	RLG00000029117 RLG00000029193 RLG00000029194 RLG00000029196 RLG00000029198
rosa_roxburghii	Rroxscaffold_4G00313290
rosa_rugosa	Rorug01G0144700.1 Rorug01G0144800.1 Rorug01G0144900.1 Rorug01G0146000.1
rosa_samantha	Rh1AG161100 Rh1AG161300 Rh1AG161700 Rh1BG128300 Rh1BG128500 Rh1BG129200 Rh1BG129300 Rh1BG129400 Rh1CG150900 Rh1DG164600 Rh1DG164700 Rh1DG165900 Rh1DG166000 Rh1DG166100
rosa_wichuraiana	Rw1G013350 Rw1G013380 Rw1G013590 Rw1G013600 Rw1G013640 Rw1G013670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	5 cut(s)	246, 259, 388, 415, 791
AcoI	YGGCCR	1 cut(s)	307
AcsI	RAATTY	3 cut(s)	267, 452, 925
AcuI	CTGAAG	3 cut(s)	124, 177, 423
AcvI	CACGTG	1 cut(s)	404
AfiI	CCNNNNNNNGG	4 cut(s)	331, 472, 638, 686
AflII	CTTAAG	1 cut(s)	947
AgsI	TTSAA	2 cut(s)	370, 498
AjiI	CACGTC	1 cut(s)	788
AluBI	AGCT	9 cut(s)	6, 74, 122, 151, 510, 524, 666, 751, 851
AluI	AGCT	9 cut(s)	6, 74, 122, 151, 510, 524, 666, 751, 851
Alw21I	GWGCWC	2 cut(s)	512, 668
Alw26I	GTCTC	3 cut(s)	180, 420, 531
AlwI	GGATC	5 cut(s)	246, 259, 388, 415, 791
AoxI	GGCC	4 cut(s)	307, 394, 474, 771
ApoI	RAATTY	3 cut(s)	267, 452, 925
ArsI	GACNNNNNNTTYG	2 cut(s)	37, 69
AseI	ATTAAT	1 cut(s)	885
AspS9I	GGNCC	1 cut(s)	828
AsuC2I	CCSGG	1 cut(s)	709
AsuHPI	GGTGA	2 cut(s)	149, 866
AvaII	GGWCC	1 cut(s)	828
BalI	TGGCCA	1 cut(s)	309
BamHI	GGATCC	1 cut(s)	251
BanII	GRGCYC	4 cut(s)	40, 512, 620, 668
BauI	CACGAG	1 cut(s)	77
BbrPI	CACGTG	1 cut(s)	404
BbsI	GAAGAC	2 cut(s)	366, 895
Bbv12I	GWGCWC	2 cut(s)	512, 668
BccI	CCATC	1 cut(s)	440
BceAI	ACGGC	1 cut(s)	758
BcgI	CGANNNNNNTGC	2 cut(s)	390, 424
BcnI	CCSGG	1 cut(s)	709
BcoDI	GTCTC	3 cut(s)	180, 420, 531
BfaI	CTAG	1 cut(s)	272
BfmI	CTRYAG	1 cut(s)	256
BfrI	CTTAAG	1 cut(s)	947
Bme1390I	CCNGG	1 cut(s)	709
Bme18I	GGWCC	1 cut(s)	828
BmgBI	CACGTC	1 cut(s)	788
BmgT120I	GGNCC	1 cut(s)	828
BmiI	GGNNCC	4 cut(s)	37, 253, 298, 619
BmrFI	CCNGG	1 cut(s)	709
BmrI	ACTGGG	1 cut(s)	623
BmuI	ACTGGG	1 cut(s)	623
BpiI	GAAGAC	2 cut(s)	366, 895
BpmI	CTGGAG	3 cut(s)	555, 615, 663
Bpu10I	CCTNAGC	1 cut(s)	812
BpuMI	CCSGG	1 cut(s)	709
BsaAI	YACGTR	1 cut(s)	404
BsaI	GGTCTC	1 cut(s)	531
BsaJI	CCNNGG	2 cut(s)	30, 63
BsaWI	WCCGGW	2 cut(s)	825, 836
Bsc4I	CCNNNNNNNGG	4 cut(s)	331, 472, 638, 686
Bse1I	ACTGG	2 cut(s)	310, 618
Bse3DI	GCAATG	2 cut(s)	579, 722
BseDI	CCNNGG	2 cut(s)	30, 63
BseLI	CCNNNNNNNGG	4 cut(s)	331, 472, 638, 686
BseMI	GCAATG	2 cut(s)	579, 722
BseMII	CTCAG	1 cut(s)	653
BseNI	ACTGG	2 cut(s)	310, 618
BseRI	GAGGAG	3 cut(s)	168, 610, 658
BsgI	GTGCAG	2 cut(s)	491, 850
BshFI	GGCC	4 cut(s)	309, 396, 476, 773
BsiHKAI	GWGCWC	2 cut(s)	512, 668
BsiSI	CCGG	3 cut(s)	708, 826, 837
BslFI	GGGAC	2 cut(s)	597, 724
BslI	CCNNNNNNNGG	4 cut(s)	331, 472, 638, 686
BsmAI	GTCTC	3 cut(s)	180, 420, 531
BsmFI	GGGAC	2 cut(s)	597, 724
BsnI	GGCC	4 cut(s)	309, 396, 476, 773
Bso31I	GGTCTC	1 cut(s)	531
Bsp1286I	GDGCHC	4 cut(s)	40, 512, 620, 668
Bsp143I	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
Bsp19I	CCATGG	2 cut(s)	30, 63
BspANI	GGCC	4 cut(s)	309, 396, 476, 773
BspCNI	CTCAG	1 cut(s)	654
BspLI	GGNNCC	4 cut(s)	37, 253, 298, 619
BspPI	GGATC	5 cut(s)	246, 259, 388, 415, 791
BspTI	CTTAAG	1 cut(s)	947
BspTNI	GGTCTC	1 cut(s)	531
BsrDI	GCAATG	2 cut(s)	579, 722
BsrI	ACTGG	2 cut(s)	310, 618
BssECI	CCNNGG	2 cut(s)	30, 63
BssMI	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
BssSI	CACGAG	1 cut(s)	77
BssT1I	CCWWGG	2 cut(s)	30, 63
Bst2BI	CACGAG	1 cut(s)	77
Bst4CI	ACNGT	5 cut(s)	161, 202, 230, 608, 961
Bst6I	CTCTTC	2 cut(s)	371, 499
BstAFI	CTTAAG	1 cut(s)	947
BstBAI	YACGTR	1 cut(s)	404
BstC8I	GCNNGC	1 cut(s)	474
BstDEI	CTNAG	3 cut(s)	560, 662, 812
BstDSI	CCRYGG	2 cut(s)	30, 63
BstENI	CCTNNNNNAGG	1 cut(s)	470
BstKTI	GATC	6 cut(s)	127, 254, 383, 393, 410, 799
BstMAI	GTCTC	3 cut(s)	180, 420, 531
BstMBI	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
BstMWI	GCNNNNNNNGC	5 cut(s)	35, 393, 507, 813, 848
BstSCI	CCNGG	1 cut(s)	707
BstSFI	CTRYAG	1 cut(s)	256
BstV2I	GAAGAC	2 cut(s)	366, 895
BstX2I	RGATCY	1 cut(s)	251
BstYI	RGATCY	1 cut(s)	251
BsuRI	GGCC	4 cut(s)	309, 396, 476, 773
BtgI	CCRYGG	2 cut(s)	30, 63
BtrI	CACGTC	1 cut(s)	788
BtsI	GCAGTG	2 cut(s)	523, 768
BtsIMutI	CAGTG	6 cut(s)	148, 523, 611, 659, 768, 957
Cac8I	GCNNGC	1 cut(s)	474
Cfr13I	GGNCC	1 cut(s)	828
CspCI	CAANNNNNGTGG	2 cut(s)	561, 596
CviAII	CATG	5 cut(s)	31, 64, 172, 388, 913
DdeI	CTNAG	3 cut(s)	560, 662, 812
DpnI	GATC	6 cut(s)	126, 253, 382, 392, 409, 798
DpnII	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
EaeI	YGGCCR	1 cut(s)	307
Eam1104I	CTCTTC	2 cut(s)	371, 499
EarI	CTCTTC	2 cut(s)	371, 499
Ecl136II	GAGCTC	2 cut(s)	510, 666
Eco130I	CCWWGG	2 cut(s)	30, 63
Eco147I	AGGCCT	1 cut(s)	476
Eco24I	GRGCYC	4 cut(s)	40, 512, 620, 668
Eco31I	GGTCTC	1 cut(s)	531
Eco47I	GGWCC	1 cut(s)	828
Eco53kI	GAGCTC	2 cut(s)	510, 666
Eco57I	CTGAAG	3 cut(s)	124, 177, 423
Eco72I	CACGTG	1 cut(s)	404
EcoICRI	GAGCTC	2 cut(s)	510, 666
EcoNI	CCTNNNNNAGG	1 cut(s)	470
EcoRI	GAATTC	1 cut(s)	267
EcoT14I	CCWWGG	2 cut(s)	30, 63
EcoT38I	GRGCYC	4 cut(s)	40, 512, 620, 668
ErhI	CCWWGG	2 cut(s)	30, 63
FaeI	CATG	5 cut(s)	34, 67, 175, 391, 916
FalI	AAGNNNNNCTT	2 cut(s)	274, 306
FaqI	GGGAC	2 cut(s)	597, 724
FatI	CATG	5 cut(s)	30, 63, 171, 387, 912
FriOI	GRGCYC	4 cut(s)	40, 512, 620, 668
FspBI	CTAG	1 cut(s)	272
GsuI	CTGGAG	3 cut(s)	555, 615, 663
HaeIII	GGCC	4 cut(s)	309, 396, 476, 773
HapII	CCGG	3 cut(s)	708, 826, 837
Hin1II	CATG	5 cut(s)	34, 67, 175, 391, 916
HincII	GTYRAC	1 cut(s)	720
HindII	GTYRAC	1 cut(s)	720
HinfI	GANTC	3 cut(s)	164, 285, 656
HpaII	CCGG	3 cut(s)	708, 826, 837
HphI	GGTGA	2 cut(s)	149, 866
Hpy166II	GTNNAC	3 cut(s)	347, 611, 720
Hpy188I	TCNGA	1 cut(s)	196
Hpy188III	TCNNGA	4 cut(s)	483, 534, 783, 931
Hpy8I	GTNNAC	3 cut(s)	347, 611, 720
Hpy99I	CGWCG	1 cut(s)	807
HpyAV	CCTTC	1 cut(s)	201
HpyCH4III	ACNGT	5 cut(s)	161, 202, 230, 608, 961
HpyCH4IV	ACGT	4 cut(s)	403, 586, 716, 787
HpyCH4V	TGCA	5 cut(s)	472, 598, 791, 867, 984
HpyF10VI	GCNNNNNNNGC	5 cut(s)	35, 393, 507, 813, 848
HpyF3I	CTNAG	3 cut(s)	560, 662, 812
HpySE526I	ACGT	4 cut(s)	403, 586, 716, 787
Hsp92II	CATG	5 cut(s)	34, 67, 175, 391, 916
Kzo9I	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
LmnI	GCTCC	8 cut(s)	35, 148, 302, 623, 634, 671, 682, 856
MaeI	CTAG	1 cut(s)	272
MaeII	ACGT	4 cut(s)	403, 586, 716, 787
MaeIII	GTNAC	4 cut(s)	161, 202, 219, 286
MalI	GATC	6 cut(s)	126, 253, 382, 392, 409, 798
MboI	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
MboII	GAAGA	6 cut(s)	9, 358, 371, 429, 486, 895
MflI	RGATCY	1 cut(s)	251
MhlI	GDGCHC	4 cut(s)	40, 512, 620, 668
MlsI	TGGCCA	1 cut(s)	309
MluCI	AATT	7 cut(s)	267, 315, 452, 703, 755, 925, 991
MluNI	TGGCCA	1 cut(s)	309
MlyI	GAGTC	2 cut(s)	158, 294
MnlI	CCTC	9 cut(s)	189, 241, 374, 407, 631, 631, 679, 679, 810
Mox20I	TGGCCA	1 cut(s)	309
MscI	TGGCCA	1 cut(s)	309
MseI	TTAA	6 cut(s)	489, 857, 885, 948, 969, 994
Msp20I	TGGCCA	1 cut(s)	309
MspCI	CTTAAG	1 cut(s)	947
MspI	CCGG	3 cut(s)	708, 826, 837
MspR9I	CCNGG	1 cut(s)	709
MwoI	GCNNNNNNNGC	5 cut(s)	35, 393, 507, 813, 848
NciI	CCSGG	1 cut(s)	709
NcoI	CCATGG	2 cut(s)	30, 63
NdeII	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
NlaIII	CATG	5 cut(s)	34, 67, 175, 391, 916
NlaIV	GGNNCC	4 cut(s)	37, 253, 298, 619
NmuCI	GTSAC	4 cut(s)	161, 202, 219, 286
PceI	AGGCCT	1 cut(s)	476
PfeI	GAWTC	1 cut(s)	656
PfoI	TCCNGGA	1 cut(s)	707
PleI	GAGTC	2 cut(s)	158, 293
PmaCI	CACGTG	1 cut(s)	404
PmlI	CACGTG	1 cut(s)	404
PpsI	GAGTC	2 cut(s)	158, 293
Ppu21I	YACGTR	1 cut(s)	404
PshBI	ATTAAT	1 cut(s)	885
Psp124BI	GAGCTC	2 cut(s)	512, 668
PspCI	CACGTG	1 cut(s)	404
PspN4I	GGNNCC	4 cut(s)	37, 253, 298, 619
PspPI	GGNCC	1 cut(s)	828
PsuI	RGATCY	1 cut(s)	251
SacI	GAGCTC	2 cut(s)	512, 668
SaqAI	TTAA	6 cut(s)	489, 857, 885, 948, 969, 994
Sau3AI	GATC	6 cut(s)	124, 251, 380, 390, 407, 796
Sau96I	GGNCC	1 cut(s)	828
SchI	GAGTC	2 cut(s)	158, 294
ScrFI	CCNGG	1 cut(s)	709
SduI	GDGCHC	4 cut(s)	40, 512, 620, 668
SfcI	CTRYAG	1 cut(s)	256
SinI	GGWCC	1 cut(s)	828
SmlI	CTYRAG	1 cut(s)	947
SmoI	CTYRAG	1 cut(s)	947
Sse9I	AATT	7 cut(s)	267, 315, 452, 703, 755, 925, 991
SseBI	AGGCCT	1 cut(s)	476
SspI	AATATT	2 cut(s)	646, 694
SspMI	CTAG	1 cut(s)	272
SstI	GAGCTC	2 cut(s)	512, 668
StuI	AGGCCT	1 cut(s)	476
StyD4I	CCNGG	1 cut(s)	707
StyI	CCWWGG	2 cut(s)	30, 63
TaaI	ACNGT	5 cut(s)	161, 202, 230, 608, 961
TaiI	ACGT	4 cut(s)	406, 589, 719, 790
TaqI	TCGA	2 cut(s)	44, 889
TaqII	GACCGA	1 cut(s)	555
TasI	AATT	7 cut(s)	267, 315, 452, 703, 755, 925, 991
TfiI	GAWTC	1 cut(s)	656
Tru1I	TTAA	6 cut(s)	489, 857, 885, 948, 969, 994
Tru9I	TTAA	6 cut(s)	489, 857, 885, 948, 969, 994
TscAI	CASTG	6 cut(s)	148, 523, 618, 666, 768, 964
TseFI	GTSAC	4 cut(s)	161, 202, 219, 286
Tsp45I	GTSAC	4 cut(s)	161, 202, 219, 286
TspDTI	ATGAA	1 cut(s)	372
TspGWI	ACGGA	1 cut(s)	843
TspRI	CASTG	6 cut(s)	148, 523, 618, 666, 768, 964
Vha464I	CTTAAG	1 cut(s)	947
VpaK11BI	GGWCC	1 cut(s)	828
VspI	ATTAAT	1 cut(s)	885
XagI	CCTNNNNNAGG	1 cut(s)	470
XapI	RAATTY	3 cut(s)	267, 452, 925
XspI	CTAG	1 cut(s)	272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.