Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001618

Physical Location & Seq

Genomic Coordinates Reverse (-)

34907040 .. 34908371

Gene Structure 1332 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ56961

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGCAGCCTTAGCAACAACAGCATTTGCACTCTTCCTTCTTTGTGTCTCTATTTTCTCTTCAGTCTCTGCCAAAGGAGGCTTCACCATTGACCTAATTCACCGCGACTCGCCACGCTCTCCCTTCTACAACCCTGCAGAAACTCCATCCCAACGCTTGGAGAATGCCTTTCGCCGTTCCTTCGGCCGACTCAGCCATTTTAAGCCAACAACTTCCTCTTCTGTAGCTCAGCCTAACCAGGCCGAGTCCACTATAATCAACAACCGTGGTGAGTACCTCATGGAGTTGGCAATTGGAACACCACCGGTTCCGATCAAGGCCATTGCCGACACCGGCAGTGACCTCATCTGGACGCAGTGCAAGCCTTGTGATGATTGCTACACGCAAACCGATCCTCTTTTCGACCCTTCCAAATCGTCTACTTACAAAACCGTTCCTTGCTCTTCAAACCAATGTACTGAGTTAAAGGGCAGGTGCTCCTCCGAGGGGAGTGGTTCGGGTTCGGCTTGCCAATACGAAGTGAACTATGGTGATCAGTCATACACAATCGGAGACATTGCCGTGGACACTCTAACCCTAGCTTCCACTACCGGGAGAAACGTTTCTTTCCCGAAAACAATAATCGGGTGTGGTCACAACAATGATGGAACCTTTGACAAGAAAGGGTCTGGCATAGTTGGGCTTGGAGGTGGTGACGAGTCACTCATTACTCAATTGGGTACTTCTATAGATGGAAAGTTTTCATATTGCTTGATCCCTTTTGCCTCGGAAGGTGACCAAACAAGCAAGTTGAACTTTGGTGACAAAGCTGTGGTTTCCGGATCTGGTGTTCTTTCCACTCCCATTGTCAAAGATCAAACCCGAAAAACCTTCTTCTTCTTGACATTGGAGGCTATAAGCGTCGACAACACAAAAATTCCCTTCTCATCCTCAAGTTCAGGCTCTGGTGAGGGCAACATTATAATCGACTCCGGCACCACACTAACCATACTAGAGCAGTCCTTCTACTCGGAGCTAGAAGAAGCAGTTGACAAGGTTGTCGGCGGGGAGCGCGTGAGCGACCCTCAGATTGGAATACCTCTTTGCTATAAGGTGAGTCTATCCCAGGATTTGAAGGTCCCAAATATTACCGTACATTTCACCGGCGCTGATGTGAAGTTGGAGCAGCAGAACACCTTTGTTAGGGTGAGCGATGACACTGTGTGCTTTGCCTTTGCTCCGGCGCAGAGTCTTTCGATCTATGGGAACCTGGCCCAAGCGGGTTTCTTGGTTGGATATGACCTTAAGGGCAAGGCTGTGTCCTTCAAGCCAAGTGACTGCACCAAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0010310 GO:0010337 GO:0010565 GO:0010817 GO:0016787 GO:0019222 GO:0019538 GO:0030163 GO:0031323 GO:0032350 GO:0042742 GO:0043170 GO:0043207 GO:0044238 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0062012 GO:0065007 GO:0065008 GO:0070001 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

443

Amino Acids

47.23

Weight (kDa)

5.03

Isoelectric Point (pI)

31.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	91 - 144	5.2e-07	Eukaryotic aspartyl protease
TAXi_N	PF14543	92 - 268	2.1e-57	Xylanase inhibitor N-terminal
Asp	PF00026	168 - 435	1.6e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	292 - 436	1.3e-27	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64830 AT5G33340
fragaria_vesca	FvH4_7g07620 FvH4_7g07650 FvH4_7g07651
malus_domestica	MD02G1235000.v1.1 MD02G1235700.v1.1 MD07G1079900.v1.1 MD07G1080000.v1.1 MD14G1073600.v1.1 MD14G1073700.v1.1
prunus_persica	Prupe.2G103100_v2.0.a1 Prupe.7G050200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342781 RchiOBHm_Chr1g0342851 RchiOBHm_Chr1g0342861 RchiOBHm_Chr1g0343021 RchiOBHm_Chr1g0343031 RchiOBHm_Chr4g0401311
rosa_laevigata	RLG00000029117 RLG00000029193 RLG00000029194 RLG00000029196 RLG00000029198
rosa_roxburghii	Rroxscaffold_4G00313290
rosa_rugosa	Rorug01G0144700.1 Rorug01G0144800.1 Rorug01G0144900.1 Rorug01G0146000.1
rosa_samantha	Rh1AG161100 Rh1AG161300 Rh1AG161700 Rh1BG128300 Rh1BG128500 Rh1BG129200 Rh1BG129300 Rh1BG129400 Rh1CG150900 Rh1DG164600 Rh1DG164700 Rh1DG165900 Rh1DG166000 Rh1DG166100
rosa_wichuraiana	Rw1G013350 Rw1G013380 Rw1G013590 Rw1G013600 Rw1G013640 Rw1G013670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	962
AarI	CACCTGC	1 cut(s)	462
AasI	GACNNNNNNGTC	1 cut(s)	1037
Acc36I	ACCTGC	1 cut(s)	462
AccB1I	GGYRCC	1 cut(s)	974
AccB7I	CCANNNNNTGG	1 cut(s)	157
AccI	GTMKAC	2 cut(s)	419, 903
AccII	CGCG	2 cut(s)	105, 1053
AccIII	TCCGGA	1 cut(s)	818
AciI	CCGC	3 cut(s)	103, 1044, 1259
AclI	AACGTT	1 cut(s)	600
AclWI	GGATC	3 cut(s)	386, 748, 829
AcoI	YGGCCR	1 cut(s)	184
AcsI	RAATTY	1 cut(s)	915
AcuI	CTGAAG	1 cut(s)	45
AdeI	CACNNNGTG	1 cut(s)	1203
AfaI	GTAC	4 cut(s)	275, 457, 721, 1134
AfiI	CCNNNNNNNGG	5 cut(s)	157, 486, 591, 1070, 1182
AflII	CTTAAG	1 cut(s)	1283
AgeI	ACCGGT	1 cut(s)	304
AgsI	TTSAA	4 cut(s)	447, 793, 1114, 1306
AjnI	CCWGG	3 cut(s)	237, 1104, 1248
AjuI	GAANNNNNNNTTGG	2 cut(s)	65, 97
AloI	GAACNNNNNNTCC	2 cut(s)	813, 845
AluBI	AGCT	4 cut(s)	227, 581, 809, 1015
AluI	AGCT	4 cut(s)	227, 581, 809, 1015
Alw21I	GWGCWC	1 cut(s)	479
Alw26I	GTCTC	3 cut(s)	52, 70, 546
AlwI	GGATC	3 cut(s)	386, 748, 829
AlwNI	CAGNNNCTG	2 cut(s)	68, 944
Aor13HI	TCCGGA	1 cut(s)	818
AoxI	GGCC	4 cut(s)	184, 240, 318, 1251
ApeKI	GCWGC	2 cut(s)	5, 1165
ApoI	RAATTY	1 cut(s)	915
AsiGI	ACCGGT	1 cut(s)	304
Asp700I	GAANNNNTTC	2 cut(s)	601, 739
AspLEI	GCGC	3 cut(s)	1053, 1148, 1225
AspS9I	GGNCC	2 cut(s)	1117, 1252
AsuC2I	CCSGG	1 cut(s)	592
AvaII	GGWCC	1 cut(s)	1117
BanI	GGYRCC	1 cut(s)	974
Bbv12I	GWGCWC	1 cut(s)	479
BbvI	GCAGC	2 cut(s)	17, 1177
BccI	CCATC	3 cut(s)	154, 638, 725
BceAI	ACGGC	2 cut(s)	159, 545
BciT130I	CCWGG	3 cut(s)	239, 1106, 1250
BclI	TGATCA	1 cut(s)	532
BcnI	CCSGG	1 cut(s)	592
BcoDI	GTCTC	3 cut(s)	52, 70, 546
BfaI	CTAG	3 cut(s)	578, 992, 1016
BfmI	CTRYAG	3 cut(s)	135, 222, 726
BfoI	RGCGCY	1 cut(s)	1149
BfrI	CTTAAG	1 cut(s)	1283
BfuAI	ACCTGC	1 cut(s)	462
BisI	GCNGC	2 cut(s)	6, 1166
BlpI	GCTNAGC	1 cut(s)	228
BlsI	GCNGC	2 cut(s)	7, 1167
Bme1390I	CCNGG	4 cut(s)	239, 592, 1106, 1250
Bme18I	GGWCC	1 cut(s)	1117
BmgT120I	GGNCC	2 cut(s)	1117, 1252
BmiI	GGNNCC	5 cut(s)	309, 649, 976, 1119, 1247
BmrFI	CCNGG	4 cut(s)	239, 592, 1106, 1250
BplI	GAGNNNNNCTC	2 cut(s)	1048, 1080
Bpu10I	CCTNAGC	1 cut(s)	10
Bpu1102I	GCTNAGC	1 cut(s)	228
BpuEI	CTTGAG	1 cut(s)	916
BpuMI	CCSGG	1 cut(s)	592
BsaJI	CCNNGG	5 cut(s)	265, 483, 561, 765, 1104
BsaWI	WCCGGW	2 cut(s)	304, 818
Bsc4I	CCNNNNNNNGG	5 cut(s)	157, 486, 591, 1070, 1182
Bse118I	RCCGGY	3 cut(s)	304, 332, 1142
Bse3DI	GCAATG	2 cut(s)	321, 555
BseAI	TCCGGA	1 cut(s)	818
BseBI	CCWGG	3 cut(s)	239, 1106, 1250
BseDI	CCNNGG	5 cut(s)	265, 483, 561, 765, 1104
BseGI	GGATG	2 cut(s)	146, 926
BseLI	CCNNNNNNNGG	5 cut(s)	157, 486, 591, 1070, 1182
BseMI	GCAATG	2 cut(s)	321, 555
BseMII	CTCAG	4 cut(s)	205, 242, 450, 1079
BseRI	GAGGAG	1 cut(s)	469
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	2 cut(s)	17, 1177
BsgI	GTGCAG	1 cut(s)	1303
Bsh1236I	CGCG	2 cut(s)	105, 1053
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	4 cut(s)	186, 242, 320, 1253
BshNI	GGYRCC	1 cut(s)	974
BshTI	ACCGGT	1 cut(s)	304
BsiEI	CGRYCG	1 cut(s)	187
BsiHKAI	GWGCWC	1 cut(s)	479
BsiSI	CCGG	7 cut(s)	305, 333, 591, 819, 972, 1143, 1220
BslFI	GGGAC	1 cut(s)	1103
BslI	CCNNNNNNNGG	5 cut(s)	157, 486, 591, 1070, 1182
BsmAI	GTCTC	3 cut(s)	52, 70, 546
BsmFI	GGGAC	1 cut(s)	1103
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	4 cut(s)	186, 242, 320, 1253
Bsp1286I	GDGCHC	1 cut(s)	479
Bsp13I	TCCGGA	1 cut(s)	818
Bsp143I	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
Bsp1720I	GCTNAGC	1 cut(s)	228
BspACI	CCGC	3 cut(s)	103, 1044, 1259
BspANI	GGCC	4 cut(s)	186, 242, 320, 1253
BspCNI	CTCAG	4 cut(s)	204, 241, 451, 1078
BspEI	TCCGGA	1 cut(s)	818
BspFNI	CGCG	2 cut(s)	105, 1053
BspLI	GGNNCC	5 cut(s)	309, 649, 976, 1119, 1247
BspMAI	CTGCAG	1 cut(s)	139
BspMI	ACCTGC	1 cut(s)	462
BspPI	GGATC	3 cut(s)	386, 748, 829
BspQI	GCTCTTC	1 cut(s)	448
BspT107I	GGYRCC	1 cut(s)	974
BspTI	CTTAAG	1 cut(s)	1283
BsrDI	GCAATG	2 cut(s)	321, 555
BsrFI	RCCGGY	3 cut(s)	304, 332, 1142
BssAI	RCCGGY	3 cut(s)	304, 332, 1142
BssECI	CCNNGG	5 cut(s)	265, 483, 561, 765, 1104
BssMI	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
Bst2UI	CCWGG	3 cut(s)	239, 1106, 1250
Bst4CI	ACNGT	4 cut(s)	266, 433, 1132, 1201
Bst6I	CTCTTC	4 cut(s)	38, 64, 223, 448
BstAFI	CTTAAG	1 cut(s)	1283
BstC8I	GCNNGC	2 cut(s)	362, 508
BstDEI	CTNAG	5 cut(s)	10, 191, 228, 459, 1065
BstDSI	CCRYGG	2 cut(s)	265, 561
BstEII	GGTNACC	1 cut(s)	773
BstENI	CCTNNNNNAGG	1 cut(s)	1180
BstF5I	GGATG	2 cut(s)	146, 926
BstFNI	CGCG	2 cut(s)	105, 1053
BstH2I	RGCGCY	1 cut(s)	1149
BstHHI	GCGC	3 cut(s)	1053, 1148, 1225
BstKTI	GATC	7 cut(s)	315, 394, 535, 756, 824, 856, 1239
BstMAI	GTCTC	3 cut(s)	52, 70, 546
BstMBI	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
BstMCI	CGRYCG	1 cut(s)	187
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 20, 192, 361, 1050
BstNI	CCWGG	3 cut(s)	239, 1106, 1250
BstPI	GGTNACC	1 cut(s)	773
BstSCI	CCNGG	4 cut(s)	237, 590, 1104, 1248
BstSFI	CTRYAG	3 cut(s)	135, 222, 726
BstUI	CGCG	2 cut(s)	105, 1053
BstV1I	GCAGC	2 cut(s)	17, 1177
BstX2I	RGATCY	1 cut(s)	821
BstYI	RGATCY	1 cut(s)	821
BstZI	CGGCCG	1 cut(s)	184
BsuRI	GGCC	4 cut(s)	186, 242, 320, 1253
BtgI	CCRYGG	2 cut(s)	265, 561
BtgZI	GCGATG	1 cut(s)	1206
BtsCI	GGATG	2 cut(s)	146, 926
BtsI	GCAGTG	2 cut(s)	343, 362
BtsIMutI	CAGTG	3 cut(s)	343, 362, 1197
BveI	ACCTGC	1 cut(s)	462
Cac8I	GCNNGC	2 cut(s)	362, 508
CaiI	CAGNNNCTG	2 cut(s)	68, 944
CfoI	GCGC	3 cut(s)	1053, 1148, 1225
Cfr10I	RCCGGY	3 cut(s)	304, 332, 1142
Cfr13I	GGNCC	2 cut(s)	1117, 1252
CseI	GACGC	2 cut(s)	361, 889
Csp6I	GTAC	4 cut(s)	274, 456, 720, 1133
CspAI	ACCGGT	1 cut(s)	304
CspCI	CAANNNNNGTGG	4 cut(s)	247, 282, 826, 861
CviAII	CATG	1 cut(s)	280
CviQI	GTAC	4 cut(s)	274, 456, 720, 1133
DdeI	CTNAG	5 cut(s)	10, 191, 228, 459, 1065
DpnI	GATC	7 cut(s)	314, 393, 534, 755, 823, 855, 1238
DpnII	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
DraIII	CACNNNGTG	1 cut(s)	1203
DrdI	GACNNNNNNGTC	1 cut(s)	1037
DseDI	GACNNNNNNGTC	1 cut(s)	1037
EaeI	YGGCCR	1 cut(s)	184
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	4 cut(s)	38, 64, 223, 448
EarI	CTCTTC	4 cut(s)	38, 64, 223, 448
EclXI	CGGCCG	1 cut(s)	184
Eco47I	GGWCC	1 cut(s)	1117
Eco52I	CGGCCG	1 cut(s)	184
Eco57I	CTGAAG	1 cut(s)	45
Eco91I	GGTNACC	1 cut(s)	773
EcoNI	CCTNNNNNAGG	1 cut(s)	1180
EcoO109I	RGGNCCY	1 cut(s)	1117
EcoO65I	GGTNACC	1 cut(s)	773
EcoRII	CCWGG	3 cut(s)	237, 1104, 1248
FaeI	CATG	1 cut(s)	283
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	1 cut(s)	1103
FatI	CATG	1 cut(s)	279
FauI	CCCGC	2 cut(s)	1037, 1252
FbaI	TGATCA	1 cut(s)	532
FblI	GTMKAC	2 cut(s)	419, 903
Fnu4HI	GCNGC	2 cut(s)	6, 1166
FokI	GGATG	2 cut(s)	133, 913
Fsp4HI	GCNGC	2 cut(s)	6, 1166
FspBI	CTAG	3 cut(s)	578, 992, 1016
GlaI	GCGC	3 cut(s)	1052, 1147, 1224
GluI	GCNGC	2 cut(s)	6, 1166
HaeII	RGCGCY	1 cut(s)	1149
HaeIII	GGCC	4 cut(s)	186, 242, 320, 1253
HapII	CCGG	7 cut(s)	305, 333, 591, 819, 972, 1143, 1220
HgaI	GACGC	2 cut(s)	361, 889
HhaI	GCGC	3 cut(s)	1053, 1148, 1225
Hin1II	CATG	1 cut(s)	283
Hin6I	GCGC	3 cut(s)	1051, 1146, 1223
HinP1I	GCGC	3 cut(s)	1051, 1146, 1223
HincII	GTYRAC	2 cut(s)	904, 1030
HindII	GTYRAC	2 cut(s)	904, 1030
HinfI	GANTC	7 cut(s)	107, 189, 245, 698, 968, 1096, 1228
HpaII	CCGG	7 cut(s)	305, 333, 591, 819, 972, 1143, 1220
Hpy166II	GTNNAC	6 cut(s)	249, 420, 523, 565, 904, 1030
Hpy188I	TCNGA	6 cut(s)	312, 484, 551, 769, 1012, 1068
Hpy188III	TCNNGA	4 cut(s)	349, 610, 819, 880
Hpy8I	GTNNAC	6 cut(s)	249, 420, 523, 565, 904, 1030
Hpy99I	CGWCG	1 cut(s)	905
HpyCH4III	ACNGT	4 cut(s)	266, 433, 1132, 1201
HpyCH4IV	ACGT	1 cut(s)	600
HpyCH4V	TGCA	4 cut(s)	29, 137, 360, 1320
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 20, 192, 361, 1050
HpyF3I	CTNAG	5 cut(s)	10, 191, 228, 459, 1065
HpySE526I	ACGT	1 cut(s)	600
Hsp92II	CATG	1 cut(s)	283
HspAI	GCGC	3 cut(s)	1051, 1146, 1223
Kpn2I	TCCGGA	1 cut(s)	818
Ksp22I	TGATCA	1 cut(s)	532
Kzo9I	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
LguI	GCTCTTC	1 cut(s)	448
LmnI	GCTCC	5 cut(s)	482, 1012, 1048, 1162, 1222
Lsp1109I	GCAGC	2 cut(s)	17, 1177
MaeI	CTAG	3 cut(s)	578, 992, 1016
MaeII	ACGT	1 cut(s)	600
MaeIII	GTNAC	7 cut(s)	338, 632, 692, 699, 773, 800, 1313
MalI	GATC	7 cut(s)	314, 393, 534, 755, 823, 855, 1238
MboI	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
MboII	GAAGA	7 cut(s)	25, 51, 210, 435, 865, 868, 1031
MfeI	CAATTG	2 cut(s)	291, 713
MflI	RGATCY	1 cut(s)	821
MhlI	GDGCHC	1 cut(s)	479
MluCI	AATT	4 cut(s)	96, 291, 713, 915
MlyI	GAGTC	7 cut(s)	101, 183, 254, 707, 962, 1105, 1237
MmeI	TCCRAC	2 cut(s)	1140, 1252
MroI	TCCGGA	1 cut(s)	818
MroXI	GAANNNNTTC	2 cut(s)	601, 739
MseI	TTAA	3 cut(s)	201, 464, 1284
MslI	CAYNNNNRTG	2 cut(s)	560, 639
MspCI	CTTAAG	1 cut(s)	1283
MspI	CCGG	7 cut(s)	305, 333, 591, 819, 972, 1143, 1220
MspR9I	CCNGG	4 cut(s)	239, 592, 1106, 1250
MunI	CAATTG	2 cut(s)	291, 713
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	3 cut(s)	239, 1106, 1250
MvnI	CGCG	2 cut(s)	105, 1053
MwoI	GCNNNNNNNGC	5 cut(s)	11, 20, 192, 361, 1050
NciI	CCSGG	1 cut(s)	592
NdeII	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
NlaIII	CATG	1 cut(s)	283
NlaIV	GGNNCC	5 cut(s)	309, 649, 976, 1119, 1247
NmeAIII	GCCGAG	1 cut(s)	268
NmuCI	GTSAC	7 cut(s)	338, 632, 692, 699, 773, 800, 1313
PaqCI	CACCTGC	1 cut(s)	462
PciSI	GCTCTTC	1 cut(s)	448
PctI	GAATGC	1 cut(s)	169
PdmI	GAANNNNTTC	2 cut(s)	601, 739
PflMI	CCANNNNNTGG	1 cut(s)	157
PinAI	ACCGGT	1 cut(s)	304
PkrI	GCNGC	2 cut(s)	7, 1167
PleI	GAGTC	7 cut(s)	101, 183, 253, 706, 962, 1104, 1236
PpsI	GAGTC	7 cut(s)	101, 183, 253, 706, 962, 1104, 1236
PpuMI	RGGWCCY	1 cut(s)	1117
PsiI	TTATAA	1 cut(s)	962
Psp1406I	AACGTT	1 cut(s)	600
Psp5II	RGGWCCY	1 cut(s)	1117
Psp6I	CCWGG	3 cut(s)	237, 1104, 1248
PspEI	GGTNACC	1 cut(s)	773
PspGI	CCWGG	3 cut(s)	237, 1104, 1248
PspN4I	GGNNCC	5 cut(s)	309, 649, 976, 1119, 1247
PspPI	GGNCC	2 cut(s)	1117, 1252
PspPPI	RGGWCCY	1 cut(s)	1117
PstI	CTGCAG	1 cut(s)	139
PstNI	CAGNNNCTG	2 cut(s)	68, 944
PsuI	RGATCY	1 cut(s)	821
RsaI	GTAC	4 cut(s)	275, 457, 721, 1134
RsaNI	GTAC	4 cut(s)	274, 456, 720, 1133
RseI	CAYNNNNRTG	2 cut(s)	560, 639
SalI	GTCGAC	1 cut(s)	902
SapI	GCTCTTC	1 cut(s)	448
SaqAI	TTAA	3 cut(s)	201, 464, 1284
SatI	GCNGC	2 cut(s)	6, 1166
Sau3AI	GATC	7 cut(s)	312, 391, 532, 753, 821, 853, 1236
Sau96I	GGNCC	2 cut(s)	1117, 1252
SchI	GAGTC	7 cut(s)	101, 183, 254, 707, 962, 1105, 1237
ScrFI	CCNGG	4 cut(s)	239, 592, 1106, 1250
SduI	GDGCHC	1 cut(s)	479
SfcI	CTRYAG	3 cut(s)	135, 222, 726
SgrAI	CRCCGGYG	1 cut(s)	1142
SinI	GGWCC	1 cut(s)	1117
SmiMI	CAYNNNNRTG	2 cut(s)	560, 639
SmlI	CTYRAG	2 cut(s)	931, 1283
SmoI	CTYRAG	2 cut(s)	931, 1283
Sse9I	AATT	4 cut(s)	96, 291, 713, 915
SsiI	CCGC	3 cut(s)	103, 1044, 1259
SspI	AATATT	1 cut(s)	1126
SspMI	CTAG	3 cut(s)	578, 992, 1016
StyD4I	CCNGG	4 cut(s)	237, 590, 1104, 1248
TaaI	ACNGT	4 cut(s)	266, 433, 1132, 1201
TaiI	ACGT	1 cut(s)	603
TaqI	TCGA	4 cut(s)	402, 903, 966, 1235
TasI	AATT	4 cut(s)	96, 291, 713, 915
TatI	WGTACW	1 cut(s)	455
Tru1I	TTAA	3 cut(s)	201, 464, 1284
Tru9I	TTAA	3 cut(s)	201, 464, 1284
TscAI	CASTG	3 cut(s)	343, 362, 1204
TseFI	GTSAC	7 cut(s)	338, 632, 692, 699, 773, 800, 1313
TseI	GCWGC	2 cut(s)	5, 1165
Tsp45I	GTSAC	7 cut(s)	338, 632, 692, 699, 773, 800, 1313
TspDTI	ATGAA	1 cut(s)	732
TspRI	CASTG	3 cut(s)	343, 362, 1204
Van91I	CCANNNNNTGG	1 cut(s)	157
Vha464I	CTTAAG	1 cut(s)	1283
VpaK11BI	GGWCC	1 cut(s)	1117
XagI	CCTNNNNNAGG	1 cut(s)	1180
XapI	RAATTY	1 cut(s)	915
XmiI	GTMKAC	2 cut(s)	419, 903
XmnI	GAANNNNTTC	2 cut(s)	601, 739
XspI	CTAG	3 cut(s)	578, 992, 1016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.