Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001618

Physical Location & Seq

Genomic Coordinates Reverse (-)

7725325 .. 7729612

Gene Structure 4288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1080000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

ATGGCAGCTTATCATTCTCTCGCCTTCGTTTCATTGTCAACAACTACATTGCTTTTTATTCTTTGGGCCTCTAGTTTCTCTTTGGTCTCAGCTCTCAATGGTGGCTTCAGTGTGGACCTCATTCACCGTGACTCACCAAAATCTCCCTTCTACAACCCTTCACTAACCCCAGCTGAGCGTCTGCGCCACGCCTTTCGGCGTTCCATTAACCGAATCAATCACTTCAACCCAACAGCTTCTTCACTCTCTCAGCAGGCTGGTCCTAACCAACCTGAGGCCACTATCATCAGCGATAATGGTGAGTACCTCTTGGAGTTATCTATCGGAACACCGCCCTTTCCAATCAAAGGAATTGCTGACACAGGTAGTGATCTAATTTGGACCCAATGCAACCCTTGCGTAAGTTGTTACAAACAAAAAGATCCTCTTTTTGAACCCGAAAAATCCTCAACCTACAAAGCCCTTTCTTGCTCTTCAAGCCAATGTAATTCTCTAAATGGTACTTGCTCAAGTGAGAGTTCTAGCAACTGCCAGTACGAAGTCACCTATGGAGACCAATCATACAGCTATGGAGATTTTGCCAGAGAAACCCTAACCCTAGAATCCACCACTGGCAGAAATATATCATTCCCCAAAACCCTAATTGGATGTGGGTTTGACAATAAATTTACCGCTGGTAGAGGTAGCGCATCCGGCATAGTAGGCCTTGGAGGTGGCTCAGAGTCCCTAATTACCCAATTGGGTTCTTCTATTGGTGGAAAATTCTCCCATTGCTTGGTCCCATTGGGTTCCGAAACCACAAGCAAGTTGAATTTTGGTAGCAACGCTGTCGTTACAGGCGCTGGAGTTGTGTCCACTCCTATAGTCCAGGGCCAAGATCCTAAAACCTTCTACTTCTTGACCTTGGAAGGTATAAGTGTTGGTAACACAAGAATTCCTTCTAATTCATCAGCTTTCTCCTCAGGTGAAGGCAACATTATTATCGATTCTGGCACCACATTGACCTTACTTCCACCATCGGTGTACTCGGATTTGGAAGCAGAGGTTGATAAAGCTGTTGGTAGTTTGGAACGTGTGCGACTCCCCGGCGTTCCTTTGAATCTTTGCTACAAGATTAGTGAATCCAGTTCTGATGATTTCAATCCACCAACCATCACCGTGCATTTCAGCGGTGGCGATTTGAAGTTGCCTCCGACTAACACCTTTATTAGGGTCAGTGAGGAGGCTGTGTGCTTTGCTTTCAGTGCTTCGCCAGGTGTTTCAATCTTTGGGAACCTATCACAGATGAACTTCTTGGTCGGATATGATACTAAGGAGGGGACTGTTTCCTTCAAGCCAACTGACTGCACCAAGCAGCAGAGTATAACAGTGTTTGTGACTGTTTTGTTATATGTTCAAAGTGTTGTCTTCATCTTACTCATGGGAGCTATTCACTCACTTTTCACCATTGCATTTGCCATTATTTTCCTCCCATTTCTCTCGCTCACAGAAGATGATGACCATCACCACGGAATCGGCTTTAGCCTCGAACTGATCCACCGCGATTCACCATCATCTCCATTGTACAATCCGGCGGAGTCTCATTGGCAACGCGTAAGCAACGCCTTGCAACGCTCGCATCACCGTGTGACCAACGATTTTGGCAGAAAAGGTTCAGGACTACGCGCTTCGAGTCCTATAGCGGAAGCCCGTTTAATCTATGTTGCGGGAGAGTATTTGGTGAACATATCGATTGGGATACCGCCCAAAACTTTGATCGGCATTGTGGACACCGGCAGCGATCTTACGTGGACGCAATGCAAGCCGTGTAAGGACTGTTTCAAGCAAAAAATCCCCATCTTTGATCCCAATTCTTCTTCAACATATGAGCCCCTTTCTTGTTTGTCCAAACAGTGCCATTTGCTAATTGAAGGAACTTGCTCAAACGATAAATTTTGCTATTACAATTATACGTATGGGGACAATTCCTACACCTCTGGAAATCTGTCCGTGGACACTGTTACATTGGCTTCCAGAACCGCAGGCAAGGCCGCCGTATCAATCCCCAACACCATATTTGGATGTGGACACGACAACGGAGGAATCTTCAGCGGGACTGAGACAGGCATAGTCGGACTTGGAAGCGGAGCTGTGTCGCTTATATCCCAAATCGGAAATGTGGTTGGTAGGAAATCTTTCTCTTACTGCTTGGTGCCGAGTTACGAACTACAATTTCATTCAAATTTGCACTCTAAGCAAAGTAGTCAAAGTGAAATCCCAAGCAAGATGTACTTTGGTGGTAAAGTTTCAGGCCGTGATGTGGTCTCAACTCCTTTCCTGTCGAACGGTTCGCAAACCTATTACTACCTTGAGCTACAAGGCATCAGCGTCGGAGACGACTATCTAAAGCTTCAAGTTTCCAGTCGTCAAAGTTTTAAGGGCAACATGATCATAGACTCCGGGACTACTATAACAACTTTGCCTACAAAGCTTTATCAAAGTTTCGAAACGGCAATTAGAAAGGCAATTCATCTGGAGGTGACGAAAGATCCAACCGGCATTCTACGGCTCTGCTACAAGACTAAACCGGAAATCGACGCTCCCATTGTTACCGTCCATTTCCGTGGTGCAGACGTGAAGTTAAAGTCCGTCAACACTTTCGTTAGGGTTAGGGAAGATGTTGTGTGTCTTGCATTTTCCCCGACCAACGATGTGGGGATCTATGGGAATGTGGCACAAATGAACTTCTTGGTAGGATTTGACCTCCAAGAAAGGACGTTGTCCTTCAAGGCAACCAATTGCGGTACGGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

931

Amino Acids

100.33

Weight (kDa)

6.22

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	101 - 444	4.9e-16	Eukaryotic aspartyl protease
TAXi_N	PF14543	102 - 274	2.2e-51	Xylanase inhibitor N-terminal
TAXi_C	PF14541	298 - 445	4.3e-31	Xylanase inhibitor C-terminal
Asp	PF00026	571 - 922	4.7e-17	Eukaryotic aspartyl protease
TAXi_N	PF14543	572 - 733	5.4e-47	Xylanase inhibitor N-terminal
TAXi_C	PF14541	781 - 923	2.5e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64830 AT5G33340
fragaria_vesca	FvH4_7g07620 FvH4_7g07650 FvH4_7g07651
malus_domestica	MD02G1235000.v1.1 MD02G1235700.v1.1 MD07G1079900.v1.1 MD07G1080000.v1.1 MD14G1073600.v1.1 MD14G1073700.v1.1
prunus_persica	Prupe.2G103100_v2.0.a1 Prupe.7G050200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342781 RchiOBHm_Chr1g0342851 RchiOBHm_Chr1g0342861 RchiOBHm_Chr1g0343021 RchiOBHm_Chr1g0343031 RchiOBHm_Chr4g0401311
rosa_laevigata	RLG00000029117 RLG00000029193 RLG00000029194 RLG00000029196 RLG00000029198
rosa_roxburghii	Rroxscaffold_4G00313290
rosa_rugosa	Rorug01G0144700.1 Rorug01G0144800.1 Rorug01G0144900.1 Rorug01G0146000.1
rosa_samantha	Rh1AG161100 Rh1AG161300 Rh1AG161700 Rh1BG128300 Rh1BG128500 Rh1BG129200 Rh1BG129300 Rh1BG129400 Rh1CG150900 Rh1DG164600 Rh1DG164700 Rh1DG165900 Rh1DG166000 Rh1DG166100
rosa_wichuraiana	Rw1G013350 Rw1G013380 Rw1G013590 Rw1G013600 Rw1G013640 Rw1G013670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	992, 2191
AccB7I	CCANNNNNTGG	1 cut(s)	775
AccII	CGCG	3 cut(s)	1542, 1593, 1665
AclWI	GGATC	6 cut(s)	416, 872, 1528, 1838, 2522, 2705
AcsI	RAATTY	6 cut(s)	665, 761, 811, 933, 1931, 2221
AcuI	CTGAAG	2 cut(s)	91, 2071
AdeI	CACNNNGTG	1 cut(s)	1627
AfaI	GTAC	7 cut(s)	305, 502, 536, 1025, 1565, 2270, 2785
AfiI	CCNNNNNNNGG	5 cut(s)	274, 347, 775, 1209, 2299
AflIII	ACRYGT	2 cut(s)	1072, 1591
AjiI	CACGTC	1 cut(s)	2614
AjnI	CCWGG	2 cut(s)	867, 1252
AjuI	GAANNNNNNNTTGG	2 cut(s)	223, 255
Alw26I	GTCTC	6 cut(s)	91, 546, 1584, 2093, 2308, 2367
AlwI	GGATC	6 cut(s)	416, 872, 1528, 1838, 2522, 2705
AlwNI	CAGNNNCTG	1 cut(s)	842
AoxI	GGCC	6 cut(s)	66, 276, 703, 871, 2028, 2290
ApeKI	GCWGC	3 cut(s)	5, 1354, 1776
ApoI	RAATTY	6 cut(s)	665, 761, 811, 933, 1931, 2221
Asp700I	GAANNNNTTC	3 cut(s)	937, 1651, 2174
AspLEI	GCGC	4 cut(s)	186, 689, 842, 1667
AspS9I	GGNCC	6 cut(s)	66, 115, 260, 381, 778, 871
AsuC2I	CCSGG	2 cut(s)	1086, 2440
AsuII	TTCGAA	1 cut(s)	2484
AvaII	GGWCC	4 cut(s)	115, 260, 381, 778
AxyI	CCTNAGG	2 cut(s)	273, 961
BanI	GGYRCC	2 cut(s)	992, 2191
BanII	GRGCYC	1 cut(s)	1872
BbsI	GAAGAC	1 cut(s)	1399
BbvI	GCAGC	3 cut(s)	17, 1366, 1788
BccI	CCATC	5 cut(s)	1024, 1160, 1509, 1558, 1844
BceAI	ACGGC	5 cut(s)	1789, 2018, 2277, 2505, 2561
BcgI	CGANNNNNNTGC	4 cut(s)	811, 845, 2350, 2384
BciT130I	CCWGG	2 cut(s)	869, 1254
BciVI	GTATCC	1 cut(s)	1731
BclI	TGATCA	1 cut(s)	2427
BcnI	CCSGG	2 cut(s)	1086, 2440
BcoDI	GTCTC	6 cut(s)	91, 546, 1584, 2093, 2308, 2367
BfaI	CTAG	3 cut(s)	72, 522, 599
BfmI	CTRYAG	2 cut(s)	861, 1677
BfoI	RGCGCY	1 cut(s)	843
BfuI	GTATCC	1 cut(s)	1731
BisI	GCNGC	4 cut(s)	6, 1355, 1777, 2031
BlpI	GCTNAGC	1 cut(s)	174
BlsI	GCNGC	4 cut(s)	7, 1356, 1778, 2032
Bme1390I	CCNGG	4 cut(s)	869, 1086, 1254, 2440
Bme18I	GGWCC	4 cut(s)	115, 260, 381, 778
BmgBI	CACGTC	1 cut(s)	2614
BmgT120I	GGNCC	6 cut(s)	66, 115, 260, 381, 778, 871
BmiI	GGNNCC	6 cut(s)	383, 780, 790, 994, 1274, 2193
BmrFI	CCNGG	4 cut(s)	869, 1086, 1254, 2440
BmsI	GCATC	3 cut(s)	698, 1627, 2370
BpiI	GAAGAC	1 cut(s)	1399
BpmI	CTGGAG	2 cut(s)	864, 2534
Bpu1102I	GCTNAGC	1 cut(s)	174
Bpu14I	TTCGAA	1 cut(s)	2484
BpuEI	CTTGAG	2 cut(s)	493, 2369
BpuMI	CCSGG	2 cut(s)	1086, 2440
Bsa29I	ATCGAT	2 cut(s)	984, 1730
BsaAI	YACGTR	2 cut(s)	1788, 1953
BsaBI	GATNNNNATC	2 cut(s)	1140, 1500
BsaI	GGTCTC	3 cut(s)	91, 546, 2308
BsaJI	CCNNGG	7 cut(s)	706, 868, 903, 1084, 1507, 1989, 2602
BsaWI	WCCGGW	1 cut(s)	2566
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 347, 775, 1209, 2299
Bse118I	RCCGGY	2 cut(s)	1772, 2534
Bse1I	ACTGG	4 cut(s)	532, 616, 1125, 2400
Bse21I	CCTNAGG	2 cut(s)	273, 961
Bse3DI	GCAATG	4 cut(s)	47, 769, 1446, 1802
Bse8I	GATNNNNATC	2 cut(s)	1140, 1500
BseBI	CCWGG	2 cut(s)	869, 1254
BseCI	ATCGAT	2 cut(s)	984, 1730
BseDI	CCNNGG	7 cut(s)	706, 868, 903, 1084, 1507, 1989, 2602
BseGI	GGATG	3 cut(s)	653, 689, 2066
BseJI	GATNNNNATC	2 cut(s)	1140, 1500
BseLI	CCNNNNNNNGG	5 cut(s)	274, 347, 775, 1209, 2299
BseMI	GCAATG	4 cut(s)	47, 769, 1446, 1802
BseMII	CTCAG	7 cut(s)	102, 165, 263, 264, 732, 975, 2088
BseNI	ACTGG	4 cut(s)	532, 616, 1125, 2400
BseRI	GAGGAG	2 cut(s)	949, 1235
BseXI	GCAGC	3 cut(s)	17, 1366, 1788
BseYI	CCCAGC	1 cut(s)	169
BsgI	GTGCAG	2 cut(s)	1330, 2628
Bsh1236I	CGCG	3 cut(s)	1542, 1593, 1665
BshFI	GGCC	6 cut(s)	68, 278, 705, 873, 2030, 2292
BshNI	GGYRCC	2 cut(s)	992, 2191
BshVI	ATCGAT	2 cut(s)	984, 1730
BsiSI	CCGG	7 cut(s)	693, 1086, 1571, 1773, 2439, 2535, 2567
BslFI	GGGAC	6 cut(s)	709, 764, 1333, 1973, 2107, 2455
BslI	CCNNNNNNNGG	5 cut(s)	274, 347, 775, 1209, 2299
BsmAI	GTCTC	6 cut(s)	91, 546, 1584, 2093, 2308, 2367
BsmBI	CGTCTC	1 cut(s)	2367
BsmFI	GGGAC	6 cut(s)	709, 764, 1333, 1973, 2107, 2455
BsmI	GAATGC	1 cut(s)	2538
BsnI	GGCC	6 cut(s)	68, 278, 705, 873, 2030, 2292
Bso31I	GGTCTC	3 cut(s)	91, 546, 2308
Bsp119I	TTCGAA	1 cut(s)	2484
Bsp1286I	GDGCHC	1 cut(s)	1872
Bsp1407I	TGTACA	1 cut(s)	1563
Bsp1720I	GCTNAGC	1 cut(s)	174
BspANI	GGCC	6 cut(s)	68, 278, 705, 873, 2030, 2292
BspCNI	CTCAG	7 cut(s)	101, 166, 262, 265, 731, 974, 2089
BspDI	ATCGAT	2 cut(s)	984, 1730
BspFNI	CGCG	3 cut(s)	1542, 1593, 1665
BspLI	GGNNCC	6 cut(s)	383, 780, 790, 994, 1274, 2193
BspPI	GGATC	6 cut(s)	416, 872, 1528, 1838, 2522, 2705
BspQI	GCTCTTC	1 cut(s)	478
BspT104I	TTCGAA	1 cut(s)	2484
BspT107I	GGYRCC	2 cut(s)	992, 2191
BspTNI	GGTCTC	3 cut(s)	91, 546, 2308
BsrDI	GCAATG	4 cut(s)	47, 769, 1446, 1802
BsrFI	RCCGGY	2 cut(s)	1772, 2534
BsrGI	TGTACA	1 cut(s)	1563
BsrI	ACTGG	4 cut(s)	532, 616, 1125, 2400
BssAI	RCCGGY	2 cut(s)	1772, 2534
BssECI	CCNNGG	7 cut(s)	706, 868, 903, 1084, 1507, 1989, 2602
BssT1I	CCWWGG	2 cut(s)	706, 903
Bst2UI	CCWGG	2 cut(s)	869, 1254
Bst6I	CTCTTC	1 cut(s)	478
BstAPI	GCANNNNNTGC	1 cut(s)	396
BstAUI	TGTACA	1 cut(s)	1563
BstBAI	YACGTR	2 cut(s)	1788, 1953
BstBI	TTCGAA	1 cut(s)	2484
BstC8I	GCNNGC	4 cut(s)	255, 1616, 1802, 2023
BstDEI	CTNAG	9 cut(s)	88, 174, 249, 273, 718, 961, 1311, 2097, 2232
BstDSI	CCRYGG	3 cut(s)	1507, 1989, 2602
BstENI	CCTNNNNNAGG	1 cut(s)	1207
BstF5I	GGATG	3 cut(s)	653, 689, 2066
BstFNI	CGCG	3 cut(s)	1542, 1593, 1665
BstH2I	RGCGCY	1 cut(s)	843
BstHHI	GCGC	4 cut(s)	186, 689, 842, 1667
BstMAI	GTCTC	6 cut(s)	91, 546, 1584, 2093, 2308, 2367
BstNI	CCWGG	2 cut(s)	869, 1254
BstSCI	CCNGG	4 cut(s)	867, 1084, 1252, 2438
BstSFI	CTRYAG	2 cut(s)	861, 1677
BstSNI	TACGTA	1 cut(s)	1953
BstUI	CGCG	3 cut(s)	1542, 1593, 1665
BstV1I	GCAGC	3 cut(s)	17, 1366, 1788
BstV2I	GAAGAC	1 cut(s)	1399
BstX2I	RGATCY	4 cut(s)	421, 877, 2527, 2697
BstXI	CCANNNNNNTGG	2 cut(s)	2603, 2692
BstYI	RGATCY	4 cut(s)	421, 877, 2527, 2697
Bsu15I	ATCGAT	2 cut(s)	984, 1730
Bsu36I	CCTNAGG	2 cut(s)	273, 961
BsuI	GTATCC	1 cut(s)	1731
BsuRI	GGCC	6 cut(s)	68, 278, 705, 873, 2030, 2292
BsuTUI	ATCGAT	2 cut(s)	984, 1730
BtgI	CCRYGG	3 cut(s)	1507, 1989, 2602
BtrI	CACGTC	1 cut(s)	2614
BtsCI	GGATG	3 cut(s)	653, 689, 2066
BtsIMutI	CAGTG	7 cut(s)	115, 609, 1222, 1249, 1374, 1898, 1995
Cac8I	GCNNGC	4 cut(s)	255, 1616, 1802, 2023
CaiI	CAGNNNCTG	1 cut(s)	842
CfoI	GCGC	4 cut(s)	186, 689, 842, 1667
Cfr10I	RCCGGY	2 cut(s)	1772, 2534
Cfr13I	GGNCC	6 cut(s)	66, 115, 260, 381, 778, 871
ClaI	ATCGAT	2 cut(s)	984, 1730
CseI	GACGC	4 cut(s)	167, 1801, 2356, 2585
Csp6I	GTAC	7 cut(s)	304, 501, 535, 1024, 1564, 2269, 2784
CviAII	CATG	2 cut(s)	1420, 2425
CviQI	GTAC	7 cut(s)	304, 501, 535, 1024, 1564, 2269, 2784
DdeI	CTNAG	9 cut(s)	88, 174, 249, 273, 718, 961, 1311, 2097, 2232
DraIII	CACNNNGTG	1 cut(s)	1627
Eam1104I	CTCTTC	1 cut(s)	478
EarI	CTCTTC	1 cut(s)	478
EciI	GGCGGA	1 cut(s)	1589
Eco105I	TACGTA	1 cut(s)	1953
Eco130I	CCWWGG	2 cut(s)	706, 903
Eco147I	AGGCCT	1 cut(s)	705
Eco24I	GRGCYC	1 cut(s)	1872
Eco31I	GGTCTC	3 cut(s)	91, 546, 2308
Eco47I	GGWCC	4 cut(s)	115, 260, 381, 778
Eco57I	CTGAAG	2 cut(s)	91, 2071
Eco81I	CCTNAGG	2 cut(s)	273, 961
EcoNI	CCTNNNNNAGG	1 cut(s)	1207
EcoRI	GAATTC	1 cut(s)	933
EcoRII	CCWGG	2 cut(s)	867, 1252
EcoT14I	CCWWGG	2 cut(s)	706, 903
EcoT38I	GRGCYC	1 cut(s)	1872
ErhI	CCWWGG	2 cut(s)	706, 903
Esp3I	CGTCTC	1 cut(s)	2367
FaeI	CATG	2 cut(s)	1423, 2428
FalI	AAGNNNNNCTT	6 cut(s)	411, 443, 922, 954, 2255, 2287
FaqI	GGGAC	6 cut(s)	709, 764, 1333, 1973, 2107, 2455
FatI	CATG	2 cut(s)	1419, 2424
FauI	CCCGC	2 cut(s)	1699, 2084
FauNDI	CATATG	1 cut(s)	1864
FbaI	TGATCA	1 cut(s)	2427
Fnu4HI	GCNGC	4 cut(s)	6, 1355, 1777, 2031
FokI	GGATG	3 cut(s)	660, 676, 2073
FriOI	GRGCYC	1 cut(s)	1872
Fsp4HI	GCNGC	4 cut(s)	6, 1355, 1777, 2031
FspBI	CTAG	3 cut(s)	72, 522, 599
GlaI	GCGC	4 cut(s)	185, 688, 841, 1666
GluI	GCNGC	4 cut(s)	6, 1355, 1777, 2031
GsaI	CCCAGC	1 cut(s)	173
GsuI	CTGGAG	2 cut(s)	864, 2534
HaeII	RGCGCY	1 cut(s)	843
HaeIII	GGCC	6 cut(s)	68, 278, 705, 873, 2030, 2292
HapII	CCGG	7 cut(s)	693, 1086, 1571, 1773, 2439, 2535, 2567
HgaI	GACGC	4 cut(s)	167, 1801, 2356, 2585
HhaI	GCGC	4 cut(s)	186, 689, 842, 1667
Hin1II	CATG	2 cut(s)	1423, 2428
Hin6I	GCGC	4 cut(s)	184, 687, 840, 1665
HinP1I	GCGC	4 cut(s)	184, 687, 840, 1665
HincII	GTYRAC	2 cut(s)	39, 2632
HindII	GTYRAC	2 cut(s)	39, 2632
HindIII	AAGCTT	2 cut(s)	2387, 2468
HpaII	CCGG	7 cut(s)	693, 1086, 1571, 1773, 2439, 2535, 2567
Hpy188III	TCNNGA	5 cut(s)	898, 1656, 1977, 2013, 2513
Hpy99I	CGWCG	2 cut(s)	2372, 2579
HpyCH4IV	ACGT	5 cut(s)	1072, 1787, 1952, 2613, 2756
HpyCH4V	TGCA	9 cut(s)	390, 1162, 1347, 1451, 1609, 1800, 2227, 2609, 2672
HpyF3I	CTNAG	9 cut(s)	88, 174, 249, 273, 718, 961, 1311, 2097, 2232
HpySE526I	ACGT	5 cut(s)	1072, 1787, 1952, 2613, 2756
Hsp92II	CATG	2 cut(s)	1423, 2428
HspAI	GCGC	4 cut(s)	184, 687, 840, 1665
Ksp22I	TGATCA	1 cut(s)	2427
LguI	GCTCTTC	1 cut(s)	478
LmnI	GCTCC	3 cut(s)	1424, 2126, 2584
Lsp1109I	GCAGC	3 cut(s)	17, 1366, 1788
LweI	GCATC	3 cut(s)	698, 1627, 2370
MaeI	CTAG	3 cut(s)	72, 522, 599
MaeII	ACGT	5 cut(s)	1072, 1787, 1952, 2613, 2756
MboII	GAAGA	9 cut(s)	231, 465, 738, 1399, 1502, 1845, 1848, 2077, 2666
MfeI	CAATTG	2 cut(s)	737, 2776
MflI	RGATCY	4 cut(s)	421, 877, 2527, 2697
MhlI	GDGCHC	1 cut(s)	1872
MluI	ACGCGT	1 cut(s)	1591
MlyI	GAGTC	6 cut(s)	125, 731, 1074, 1586, 1681, 2429
MmeI	TCCRAC	5 cut(s)	1217, 1279, 2092, 2350, 2555
MroXI	GAANNNNTTC	3 cut(s)	937, 1651, 2174
MseI	TTAA	4 cut(s)	207, 1694, 2415, 2621
MslI	CAYNNNNRTG	3 cut(s)	1157, 1623, 2601
MspA1I	CMGCKG	4 cut(s)	173, 674, 1170, 2091
MspI	CCGG	7 cut(s)	693, 1086, 1571, 1773, 2439, 2535, 2567
MspR9I	CCNGG	4 cut(s)	869, 1086, 1254, 2440
MunI	CAATTG	2 cut(s)	737, 2776
Mva1269I	GAATGC	1 cut(s)	2538
MvaI	CCWGG	2 cut(s)	869, 1254
MvnI	CGCG	3 cut(s)	1542, 1593, 1665
NciI	CCSGG	2 cut(s)	1086, 2440
NdeI	CATATG	1 cut(s)	1864
NlaIII	CATG	2 cut(s)	1423, 2428
NlaIV	GGNNCC	6 cut(s)	383, 780, 790, 994, 1274, 2193
NmeAIII	GCCGAG	1 cut(s)	2220
NmuCI	GTSAC	5 cut(s)	128, 541, 1375, 1627, 2518
NspV	TTCGAA	1 cut(s)	2484
PceI	AGGCCT	1 cut(s)	705
PciSI	GCTCTTC	1 cut(s)	478
PctI	GAATGC	1 cut(s)	2538
PdmI	GAANNNNTTC	3 cut(s)	937, 1651, 2174
PfeI	GAWTC	8 cut(s)	213, 602, 986, 1099, 1121, 1512, 1544, 2082
PflFI	GACNNNGTC	1 cut(s)	2758
PflMI	CCANNNNNTGG	1 cut(s)	775
PfoI	TCCNGGA	1 cut(s)	2438
PkrI	GCNGC	4 cut(s)	7, 1356, 1778, 2032
PleI	GAGTC	6 cut(s)	125, 730, 1074, 1585, 1680, 2429
PpsI	GAGTC	6 cut(s)	125, 730, 1074, 1585, 1680, 2429
Ppu21I	YACGTR	2 cut(s)	1788, 1953
Psp6I	CCWGG	2 cut(s)	867, 1252
PspFI	CCCAGC	1 cut(s)	169
PspGI	CCWGG	2 cut(s)	867, 1252
PspN4I	GGNNCC	6 cut(s)	383, 780, 790, 994, 1274, 2193
PspPI	GGNCC	6 cut(s)	66, 115, 260, 381, 778, 871
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	4 cut(s)	421, 877, 2527, 2697
PsyI	GACNNNGTC	1 cut(s)	2758
PvuII	CAGCTG	1 cut(s)	173
RsaI	GTAC	7 cut(s)	305, 502, 536, 1025, 1565, 2270, 2785
RsaNI	GTAC	7 cut(s)	304, 501, 535, 1024, 1564, 2269, 2784
RseI	CAYNNNNRTG	3 cut(s)	1157, 1623, 2601
SapI	GCTCTTC	1 cut(s)	478
SaqAI	TTAA	4 cut(s)	207, 1694, 2415, 2621
SatI	GCNGC	4 cut(s)	6, 1355, 1777, 2031
Sau96I	GGNCC	6 cut(s)	66, 115, 260, 381, 778, 871
SchI	GAGTC	6 cut(s)	125, 731, 1074, 1586, 1681, 2429
ScrFI	CCNGG	4 cut(s)	869, 1086, 1254, 2440
SduI	GDGCHC	1 cut(s)	1872
SfaNI	GCATC	3 cut(s)	698, 1627, 2370
SfcI	CTRYAG	2 cut(s)	861, 1677
SfuI	TTCGAA	1 cut(s)	2484
SinI	GGWCC	4 cut(s)	115, 260, 381, 778
SmiMI	CAYNNNNRTG	3 cut(s)	1157, 1623, 2601
SmlI	CTYRAG	2 cut(s)	508, 2348
SmoI	CTYRAG	2 cut(s)	508, 2348
SnaBI	TACGTA	1 cut(s)	1953
SseBI	AGGCCT	1 cut(s)	705
SspMI	CTAG	3 cut(s)	72, 522, 599
StuI	AGGCCT	1 cut(s)	705
StyD4I	CCNGG	4 cut(s)	867, 1084, 1252, 2438
StyI	CCWWGG	2 cut(s)	706, 903
TaiI	ACGT	5 cut(s)	1075, 1790, 1955, 2616, 2759
TaqI	TCGA	7 cut(s)	984, 1527, 1670, 1730, 2321, 2484, 2574
TatI	WGTACW	3 cut(s)	1023, 1563, 2268
TauI	GCSGC	1 cut(s)	2033
TfiI	GAWTC	8 cut(s)	213, 602, 986, 1099, 1121, 1512, 1544, 2082
Tru1I	TTAA	4 cut(s)	207, 1694, 2415, 2621
Tru9I	TTAA	4 cut(s)	207, 1694, 2415, 2621
TscAI	CASTG	7 cut(s)	115, 616, 1222, 1249, 1374, 1898, 2002
TseFI	GTSAC	5 cut(s)	128, 541, 1375, 1627, 2518
TseI	GCWGC	3 cut(s)	5, 1354, 1776
Tsp45I	GTSAC	5 cut(s)	128, 541, 1375, 1627, 2518
TspDTI	ATGAA	7 cut(s)	21, 936, 1301, 1399, 2204, 2498, 2735
TspGWI	ACGGA	5 cut(s)	1524, 1978, 2091, 2591, 2617
TspRI	CASTG	7 cut(s)	115, 616, 1222, 1249, 1374, 1898, 2002
Tth111I	GACNNNGTC	1 cut(s)	2758
Van91I	CCANNNNNTGG	1 cut(s)	775
VpaK11BI	GGWCC	4 cut(s)	115, 260, 381, 778
XagI	CCTNNNNNAGG	1 cut(s)	1207
XapI	RAATTY	6 cut(s)	665, 761, 811, 933, 1931, 2221
XmnI	GAANNNNTTC	3 cut(s)	937, 1651, 2174
XspI	CTAG	3 cut(s)	72, 522, 599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.