Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0001618

Physical Location & Seq

Genomic Coordinates Forward (+)

33855964 .. 33875096

Gene Structure 19133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG164700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGCAGCCCTAGCAACAACAGCATTTGCACTCTTTCTTCTCTGTGTCTCTGATTTCATTTCGGTCTCTGCTAAAGGAGGCTTCACCGTGGACCTGATTCACCGTGACTCACCTCGCTCTCCCTTCTACAACCCTTCAGAAACTCCATCCCAACGCTTGAAGAATTCCTTTCACCGTTCCTTCGGCCGACTCAGCCATTTAAAACCAACAGCTTACTCTTCGGTAGCTCAGCCTAACCAGGCTGAGTCCACTTTAATCAGCAACCGCGGCGAGTACCTCTTGGAGTTGTCAATCGGAACACCTCCATTTTCGATCAAGGCCATCGTAGACACTGGCAGTGACCTCATTTGGACGCAGTGCGAGCCTTGTGTTAATTGCTACACGCAAACTGATCCTATTTTCGACCCCTCAAAATCATCTACTTACAAAACCATTCATTGCTCTTCAAACCAATGCACTGAGCTAAAAGGCAGGTGCCCCGCCAAGGGGAGTGGTTCGGGTTCGGCTTGCCAATACGAAGTGGACTATGGTATTCAGTACACAATCGGAAACCTTGCCGTGGATACTCTAACCCTAGCTTCCACTACCGGGAGAAACGTTTCGTTCCCGAAAACCATAATCGGGTGTGGCCACAACAATACTGGAACCTTTGACAAAAAAGAGTCTGGCATAGTTGGGCTTGGAGGTGGCGACGAGTCACTTATTACCCAATTGGGTAATAGATGGAAAGTTTTCGTATTGCTTAGTTCCTTTTGCCTGGGAAGTGGCGGGAATGTGAAGTTGAAGCCAAATAACACCTTTATTAGGGTGAGCGACGAGGCTTTGTGCTTTGCCTTTGCTCCGGCGGTTTTGGTTCCTTCGCTCTATGGGAACGTGGCCCAGGCAGATTTCTTGGTGGGATATGACGTTAAGAAGAAGACTGTATCCTTCAAGCCAACTGATTGCACCAAGGCTATAGAGCGGTGGAGCTCGAATCTAGGTCAAGTGAGGCTGGTAGTGGTGTTGAAGACGAAGCTCATTCCTCTCCTCCGGCGAGTCTACAATGTCAGCCATCGACAAATTGAGTTTGAGGCCATTGCTTCAAACTGGGTCTCCAATTATTGGTTCACTCCATTCTTTTCACACTGGGGTATACGTTTGGAGCAGTGGTTCTTGGCGGCACATTTGACTGATTACACAACGGCCACCGCCTCTTTCTCAAGATTTTTCTCTCTTCTTCTCTTTTGGTATTTCGTTTGGTGGGTCTGTGAAATGAAAGATGCTGACTTTGTTTTCACTATCCCACCTAGTCACTCAACAACTCAGGGTAAGTTTAGATTTTCGTTGGCAGAGAAACCGCGTGAACCGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0010310 GO:0010337 GO:0010565 GO:0010817 GO:0016787 GO:0019222 GO:0019538 GO:0030163 GO:0031323 GO:0032350 GO:0042742 GO:0043170 GO:0043207 GO:0044238 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0062012 GO:0065007 GO:0065008 GO:0070001 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

450

Amino Acids

49.92

Weight (kDa)

8.78

Isoelectric Point (pI)

26.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	91 - 144	1.3e-07	Eukaryotic aspartyl protease
TAXi_N	PF14543	92 - 253	1.3e-47	Xylanase inhibitor N-terminal
TAXi_C	PF14541	253 - 311	1.7e-06	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001618)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64830 AT5G33340
fragaria_vesca	FvH4_7g07620 FvH4_7g07650 FvH4_7g07651
malus_domestica	MD02G1235000.v1.1 MD02G1235700.v1.1 MD07G1079900.v1.1 MD07G1080000.v1.1 MD14G1073600.v1.1 MD14G1073700.v1.1
prunus_persica	Prupe.2G103100_v2.0.a1 Prupe.7G050200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0342781 RchiOBHm_Chr1g0342851 RchiOBHm_Chr1g0342861 RchiOBHm_Chr1g0343021 RchiOBHm_Chr1g0343031 RchiOBHm_Chr4g0401311
rosa_laevigata	RLG00000029117 RLG00000029193 RLG00000029194 RLG00000029196 RLG00000029198
rosa_roxburghii	Rroxscaffold_4G00313290
rosa_rugosa	Rorug01G0144700.1 Rorug01G0144800.1 Rorug01G0144900.1 Rorug01G0146000.1
rosa_samantha	Rh1AG161100 Rh1AG161300 Rh1AG161700 Rh1BG128300 Rh1BG128500 Rh1BG129200 Rh1BG129300 Rh1BG129400 Rh1CG150900 Rh1DG164600 Rh1DG164700 Rh1DG165900 Rh1DG166000 Rh1DG166100
rosa_wichuraiana	Rw1G013350 Rw1G013380 Rw1G013590 Rw1G013600 Rw1G013640 Rw1G013670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	462
Acc36I	ACCTGC	1 cut(s)	462
AccB1I	GGYRCC	1 cut(s)	474
AccB7I	CCANNNNNTGG	1 cut(s)	1101
AccBSI	CCGCTC	1 cut(s)	961
AccI	GTMKAC	3 cut(s)	327, 1038, 1132
AccII	CGCG	2 cut(s)	267, 1339
AclI	AACGTT	1 cut(s)	597
AclWI	GGATC	1 cut(s)	386
AcoI	YGGCCR	3 cut(s)	184, 628, 1182
AcsI	RAATTY	1 cut(s)	163
AcuI	CTGAAG	1 cut(s)	120
AfaI	GTAC	2 cut(s)	275, 539
AfiI	CCNNNNNNNGG	8 cut(s)	484, 485, 486, 559, 588, 621, 804, 1101
AgsI	TTSAA	6 cut(s)	160, 447, 784, 931, 1006, 1083
AjnI	CCWGG	3 cut(s)	237, 756, 879
AjuI	GAANNNNNNNTTGG	2 cut(s)	1088, 1120
AloI	GAACNNNNNNTCC	2 cut(s)	1133, 1165
AluBI	AGCT	6 cut(s)	212, 227, 463, 578, 969, 1015
AluI	AGCT	6 cut(s)	212, 227, 463, 578, 969, 1015
Alw21I	GWGCWC	1 cut(s)	971
Alw26I	GTCTC	3 cut(s)	52, 70, 1096
AlwI	GGATC	1 cut(s)	386
AoxI	GGCC	6 cut(s)	184, 318, 628, 876, 1071, 1182
ApeKI	GCWGC	1 cut(s)	5
ApoI	RAATTY	1 cut(s)	163
Asp700I	GAANNNNTTC	2 cut(s)	598, 731
AspS9I	GGNCC	2 cut(s)	91, 877
AsuC2I	CCSGG	1 cut(s)	589
AsuHPI	GGTGA	5 cut(s)	76, 92, 102, 164, 820
AvaII	GGWCC	1 cut(s)	91
BaeGI	GKGCMC	1 cut(s)	479
BalI	TGGCCA	1 cut(s)	630
BanI	GGYRCC	1 cut(s)	474
BanII	GRGCYC	1 cut(s)	971
BbsI	GAAGAC	2 cut(s)	923, 1013
Bbv12I	GWGCWC	1 cut(s)	971
BbvI	GCAGC	1 cut(s)	17
BccI	CCATC	4 cut(s)	154, 329, 717, 1059
BceAI	ACGGC	2 cut(s)	542, 1197
BciT130I	CCWGG	3 cut(s)	239, 758, 881
BciVI	GTATCC	2 cut(s)	556, 934
BcnI	CCSGG	1 cut(s)	589
BcoDI	GTCTC	3 cut(s)	52, 70, 1096
BfaI	CTAG	4 cut(s)	11, 575, 977, 1287
BfmI	CTRYAG	1 cut(s)	954
BfuAI	ACCTGC	1 cut(s)	462
BfuI	GTATCC	2 cut(s)	556, 934
BisI	GCNGC	3 cut(s)	6, 268, 1158
BlpI	GCTNAGC	1 cut(s)	228
BlsI	GCNGC	3 cut(s)	7, 269, 1159
Bme1390I	CCNGG	4 cut(s)	239, 589, 758, 881
Bme18I	GGWCC	1 cut(s)	91
BmgT120I	GGNCC	2 cut(s)	91, 877
BmiI	GGNNCC	3 cut(s)	476, 646, 855
BmrFI	CCNGG	4 cut(s)	239, 589, 758, 881
BmrI	ACTGGG	2 cut(s)	1096, 1135
BmsI	GCATC	1 cut(s)	1249
BmuI	ACTGGG	2 cut(s)	1096, 1135
BpiI	GAAGAC	2 cut(s)	923, 1013
Bpu1102I	GCTNAGC	1 cut(s)	228
BpuEI	CTTGAG	1 cut(s)	1183
BpuMI	CCSGG	1 cut(s)	589
BsaI	GGTCTC	2 cut(s)	70, 1096
BsaJI	CCNNGG	7 cut(s)	87, 265, 483, 558, 757, 879, 948
BsaXI	ACNNNNNCTCC	4 cut(s)	1076, 1106, 1133, 1163
Bsc4I	CCNNNNNNNGG	8 cut(s)	484, 485, 486, 559, 588, 621, 804, 1101
Bse1I	ACTGG	4 cut(s)	337, 646, 1091, 1130
Bse3DI	GCAATG	2 cut(s)	436, 1074
BseBI	CCWGG	3 cut(s)	239, 758, 881
BseDI	CCNNGG	7 cut(s)	87, 265, 483, 558, 757, 879, 948
BseGI	GGATG	1 cut(s)	146
BseLI	CCNNNNNNNGG	8 cut(s)	484, 485, 486, 559, 588, 621, 804, 1101
BseMI	GCAATG	2 cut(s)	436, 1074
BseMII	CTCAG	5 cut(s)	205, 234, 242, 450, 1316
BseNI	ACTGG	4 cut(s)	337, 646, 1091, 1130
BseRI	GAGGAG	1 cut(s)	1016
BseSI	GKGCMC	1 cut(s)	479
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	1 cut(s)	17
Bsh1236I	CGCG	2 cut(s)	267, 1339
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	6 cut(s)	186, 320, 630, 878, 1073, 1184
BshNI	GGYRCC	1 cut(s)	474
BsiEI	CGRYCG	1 cut(s)	187
BsiHKAI	GWGCWC	1 cut(s)	971
BsiSI	CCGG	3 cut(s)	588, 842, 1030
BslI	CCNNNNNNNGG	8 cut(s)	484, 485, 486, 559, 588, 621, 804, 1101
BsmAI	GTCTC	3 cut(s)	52, 70, 1096
BsnI	GGCC	6 cut(s)	186, 320, 630, 878, 1073, 1184
Bso31I	GGTCTC	2 cut(s)	70, 1096
Bsp1286I	GDGCHC	2 cut(s)	479, 971
Bsp143I	GATC	2 cut(s)	312, 391
Bsp1720I	GCTNAGC	1 cut(s)	228
BspANI	GGCC	6 cut(s)	186, 320, 630, 878, 1073, 1184
BspCNI	CTCAG	5 cut(s)	204, 235, 241, 451, 1315
BspFNI	CGCG	2 cut(s)	267, 1339
BspLI	GGNNCC	3 cut(s)	476, 646, 855
BspMI	ACCTGC	1 cut(s)	462
BspPI	GGATC	1 cut(s)	386
BspQI	GCTCTTC	1 cut(s)	448
BspT107I	GGYRCC	1 cut(s)	474
BspTNI	GGTCTC	2 cut(s)	70, 1096
BsrBI	CCGCTC	1 cut(s)	961
BsrDI	GCAATG	2 cut(s)	436, 1074
BsrI	ACTGG	4 cut(s)	337, 646, 1091, 1130
BssECI	CCNNGG	7 cut(s)	87, 265, 483, 558, 757, 879, 948
BssMI	GATC	2 cut(s)	312, 391
BssNAI	GTATAC	1 cut(s)	1133
BssT1I	CCWWGG	2 cut(s)	483, 948
Bst1107I	GTATAC	1 cut(s)	1133
Bst2UI	CCWGG	3 cut(s)	239, 758, 881
Bst4CI	ACNGT	4 cut(s)	88, 104, 176, 922
Bst6I	CTCTTC	3 cut(s)	223, 448, 1218
BstC8I	GCNNGC	2 cut(s)	362, 508
BstDEI	CTNAG	7 cut(s)	191, 228, 243, 459, 743, 1302, 1350
BstDSI	CCRYGG	3 cut(s)	87, 265, 558
BstENI	CCTNNNNNAGG	1 cut(s)	802
BstF5I	GGATG	1 cut(s)	146
BstFNI	CGCG	2 cut(s)	267, 1339
BstKTI	GATC	2 cut(s)	315, 394
BstMAI	GTCTC	3 cut(s)	52, 70, 1096
BstMBI	GATC	2 cut(s)	312, 391
BstMCI	CGRYCG	1 cut(s)	187
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 20, 192, 267, 361, 1345
BstNI	CCWGG	3 cut(s)	239, 758, 881
BstSCI	CCNGG	4 cut(s)	237, 587, 756, 879
BstSFI	CTRYAG	1 cut(s)	954
BstSLI	GKGCMC	1 cut(s)	479
BstUI	CGCG	2 cut(s)	267, 1339
BstV1I	GCAGC	1 cut(s)	17
BstV2I	GAAGAC	2 cut(s)	923, 1013
BstZ17I	GTATAC	1 cut(s)	1133
BstZI	CGGCCG	1 cut(s)	184
BsuI	GTATCC	2 cut(s)	556, 934
BsuRI	GGCC	6 cut(s)	186, 320, 630, 878, 1073, 1184
BtgI	CCRYGG	3 cut(s)	87, 265, 558
BtsCI	GGATG	1 cut(s)	146
BtsI	GCAGTG	3 cut(s)	343, 362, 1151
BtsIMutI	CAGTG	6 cut(s)	330, 343, 362, 456, 1123, 1151
BveI	ACCTGC	1 cut(s)	462
Cac8I	GCNNGC	2 cut(s)	362, 508
Cfr13I	GGNCC	2 cut(s)	91, 877
Cfr42I	CCGCGG	1 cut(s)	268
CseI	GACGC	1 cut(s)	361
Csp6I	GTAC	2 cut(s)	274, 538
CspCI	CAANNNNNGTGG	2 cut(s)	472, 507
CviQI	GTAC	2 cut(s)	274, 538
DdeI	CTNAG	7 cut(s)	191, 228, 243, 459, 743, 1302, 1350
DpnI	GATC	2 cut(s)	314, 393
DpnII	GATC	2 cut(s)	312, 391
DraI	TTTAAA	1 cut(s)	201
EaeI	YGGCCR	3 cut(s)	184, 628, 1182
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	3 cut(s)	223, 448, 1218
EarI	CTCTTC	3 cut(s)	223, 448, 1218
Ecl136II	GAGCTC	1 cut(s)	969
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	2 cut(s)	483, 948
Eco24I	GRGCYC	1 cut(s)	971
Eco31I	GGTCTC	2 cut(s)	70, 1096
Eco47I	GGWCC	1 cut(s)	91
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	969
Eco57I	CTGAAG	1 cut(s)	120
EcoICRI	GAGCTC	1 cut(s)	969
EcoNI	CCTNNNNNAGG	1 cut(s)	802
EcoRI	GAATTC	1 cut(s)	163
EcoRII	CCWGG	3 cut(s)	237, 756, 879
EcoT14I	CCWWGG	2 cut(s)	483, 948
EcoT38I	GRGCYC	1 cut(s)	971
ErhI	CCWWGG	2 cut(s)	483, 948
FaiI	YATR	7 cut(s)	528, 617, 671, 867, 903, 956, 1133
FalI	AAGNNNNNCTT	2 cut(s)	152, 184
FauI	CCCGC	2 cut(s)	487, 761
FblI	GTMKAC	3 cut(s)	327, 1038, 1132
Fnu4HI	GCNGC	3 cut(s)	6, 268, 1158
FokI	GGATG	1 cut(s)	133
FriOI	GRGCYC	1 cut(s)	971
Fsp4HI	GCNGC	3 cut(s)	6, 268, 1158
FspBI	CTAG	4 cut(s)	11, 575, 977, 1287
GluI	GCNGC	3 cut(s)	6, 268, 1158
HaeIII	GGCC	6 cut(s)	186, 320, 630, 878, 1073, 1184
HapII	CCGG	3 cut(s)	588, 842, 1030
HgaI	GACGC	1 cut(s)	361
HinfI	GANTC	8 cut(s)	97, 107, 189, 245, 662, 695, 973, 1035
HpaII	CCGG	3 cut(s)	588, 842, 1030
HphI	GGTGA	5 cut(s)	76, 92, 102, 164, 820
Hpy166II	GTNNAC	9 cut(s)	91, 249, 328, 523, 540, 1039, 1107, 1133, 1343
Hpy188I	TCNGA	4 cut(s)	52, 139, 296, 548
Hpy188III	TCNNGA	2 cut(s)	607, 1200
Hpy8I	GTNNAC	9 cut(s)	91, 249, 328, 523, 540, 1039, 1107, 1133, 1343
Hpy99I	CGWCG	2 cut(s)	695, 818
HpyAV	CCTTC	5 cut(s)	133, 144, 190, 867, 937
HpyCH4III	ACNGT	4 cut(s)	88, 104, 176, 922
HpyCH4IV	ACGT	4 cut(s)	597, 873, 906, 1135
HpyCH4V	TGCA	3 cut(s)	29, 456, 945
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 20, 192, 267, 361, 1345
HpyF3I	CTNAG	7 cut(s)	191, 228, 243, 459, 743, 1302, 1350
HpySE526I	ACGT	4 cut(s)	597, 873, 906, 1135
KspI	CCGCGG	1 cut(s)	268
Kzo9I	GATC	2 cut(s)	312, 391
LguI	GCTCTTC	1 cut(s)	448
LmnI	GCTCC	3 cut(s)	844, 966, 1141
Lsp1109I	GCAGC	1 cut(s)	17
LweI	GCATC	1 cut(s)	1249
MaeI	CTAG	4 cut(s)	11, 575, 977, 1287
MaeII	ACGT	4 cut(s)	597, 873, 906, 1135
MaeIII	GTNAC	4 cut(s)	104, 338, 696, 1289
MalI	GATC	2 cut(s)	314, 393
MbiI	CCGCTC	1 cut(s)	961
MboI	GATC	2 cut(s)	312, 391
MboII	GAAGA	9 cut(s)	29, 172, 210, 435, 925, 928, 1018, 1205, 1208
MfeI	CAATTG	1 cut(s)	710
MhlI	GDGCHC	2 cut(s)	479, 971
MlsI	TGGCCA	1 cut(s)	630
MluCI	AATT	5 cut(s)	163, 373, 710, 1059, 1096
MluNI	TGGCCA	1 cut(s)	630
MlyI	GAGTC	6 cut(s)	101, 183, 254, 671, 704, 1044
Mox20I	TGGCCA	1 cut(s)	630
MroXI	GAANNNNTTC	2 cut(s)	598, 731
MscI	TGGCCA	1 cut(s)	630
MseI	TTAA	4 cut(s)	200, 254, 372, 909
Msp20I	TGGCCA	1 cut(s)	630
MspA1I	CMGCKG	1 cut(s)	267
MspI	CCGG	3 cut(s)	588, 842, 1030
MspR9I	CCNGG	4 cut(s)	239, 589, 758, 881
MunI	CAATTG	1 cut(s)	710
MvaI	CCWGG	3 cut(s)	239, 758, 881
MvnI	CGCG	2 cut(s)	267, 1339
MwoI	GCNNNNNNNGC	6 cut(s)	11, 20, 192, 267, 361, 1345
NciI	CCSGG	1 cut(s)	589
NdeII	GATC	2 cut(s)	312, 391
NlaIV	GGNNCC	3 cut(s)	476, 646, 855
NmuCI	GTSAC	4 cut(s)	104, 338, 696, 1289
PaqCI	CACCTGC	1 cut(s)	462
PciSI	GCTCTTC	1 cut(s)	448
PdmI	GAANNNNTTC	2 cut(s)	598, 731
PfeI	GAWTC	2 cut(s)	97, 973
PflMI	CCANNNNNTGG	1 cut(s)	1101
PkrI	GCNGC	3 cut(s)	7, 269, 1159
PleI	GAGTC	6 cut(s)	101, 183, 253, 670, 703, 1043
PpsI	GAGTC	6 cut(s)	101, 183, 253, 670, 703, 1043
Psp124BI	GAGCTC	1 cut(s)	971
Psp1406I	AACGTT	1 cut(s)	597
Psp6I	CCWGG	3 cut(s)	237, 756, 879
PspGI	CCWGG	3 cut(s)	237, 756, 879
PspN4I	GGNNCC	3 cut(s)	476, 646, 855
PspPI	GGNCC	2 cut(s)	91, 877
RsaI	GTAC	2 cut(s)	275, 539
RsaNI	GTAC	2 cut(s)	274, 538
SacI	GAGCTC	1 cut(s)	971
SacII	CCGCGG	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	448
SaqAI	TTAA	4 cut(s)	200, 254, 372, 909
SatI	GCNGC	3 cut(s)	6, 268, 1158
Sau3AI	GATC	2 cut(s)	312, 391
Sau96I	GGNCC	2 cut(s)	91, 877
SchI	GAGTC	6 cut(s)	101, 183, 254, 671, 704, 1044
ScrFI	CCNGG	4 cut(s)	239, 589, 758, 881
SduI	GDGCHC	2 cut(s)	479, 971
SfaNI	GCATC	1 cut(s)	1249
SfcI	CTRYAG	1 cut(s)	954
Sfr303I	CCGCGG	1 cut(s)	268
SgrBI	CCGCGG	1 cut(s)	268
SinI	GGWCC	1 cut(s)	91
SmlI	CTYRAG	1 cut(s)	1198
SmoI	CTYRAG	1 cut(s)	1198
Sse9I	AATT	5 cut(s)	163, 373, 710, 1059, 1096
SspMI	CTAG	4 cut(s)	11, 575, 977, 1287
SstI	GAGCTC	1 cut(s)	971
StyD4I	CCNGG	4 cut(s)	237, 587, 756, 879
StyI	CCWWGG	2 cut(s)	483, 948
TaaI	ACNGT	4 cut(s)	88, 104, 176, 922
TaiI	ACGT	4 cut(s)	600, 876, 909, 1138
TaqI	TCGA	4 cut(s)	311, 402, 971, 1054
TaqII	GACCGA	1 cut(s)	52
TasI	AATT	5 cut(s)	163, 373, 710, 1059, 1096
TatI	WGTACW	1 cut(s)	537
TauI	GCSGC	2 cut(s)	270, 1160
TfiI	GAWTC	2 cut(s)	97, 973
Tru1I	TTAA	4 cut(s)	200, 254, 372, 909
Tru9I	TTAA	4 cut(s)	200, 254, 372, 909
TscAI	CASTG	6 cut(s)	337, 343, 362, 463, 1130, 1151
TseFI	GTSAC	4 cut(s)	104, 338, 696, 1289
TseI	GCWGC	1 cut(s)	5
Tsp45I	GTSAC	4 cut(s)	104, 338, 696, 1289
TspDTI	ATGAA	3 cut(s)	46, 425, 1268
TspRI	CASTG	6 cut(s)	337, 343, 362, 463, 1130, 1151
Van91I	CCANNNNNTGG	1 cut(s)	1101
VpaK11BI	GGWCC	1 cut(s)	91
XagI	CCTNNNNNAGG	1 cut(s)	802
XapI	RAATTY	1 cut(s)	163
XcmI	CCANNNNNNNNNTGG	1 cut(s)	638
XmiI	GTMKAC	3 cut(s)	327, 1038, 1132
XmnI	GAANNNNTTC	2 cut(s)	598, 731
XspI	CTAG	4 cut(s)	11, 575, 977, 1287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.