Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001699

Physical Location & Seq

Genomic Coordinates Forward (+)

9660858 .. 9664133

Gene Structure 3276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G22730.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGTGACCAAAGAAGAAGATTGCCTTCCTCCTGTAACGGAGACCACGTCGAGATGTTATTCTACTTCTTCTTCTACTCCCCTTGCGGAGTTAGAGACTGTCCGAAGCTTAGAAATCGTCGAATCTTCTTCCTCTCTCTCTCCCGTTTGGTTACTGGTGATCTTTTGTATCATTAACTTGTTAAACTACATGGATCGTGGTGCGATAGCGAGCAATGGTGTCAATGGCAGTACCAGGAGTTGTAATGATAAGGGCAAATGCACTCTTGCAACTGGAATTCAGGGACATTTTAACCTAAGTAATTTCGAAGATGGTGTATTGTCATCTTCATTTATGGTTGGACTTCTTATTGCATCACCAATCTTTGCTTCATTGGCAAAAAGACTTATTGGAGTAGGTTTAACTGTTTGGACTATTGCAGTTCTTGGCTGTGGCAGTTCCTTTGCCTTTTGGTTTATCGTCTTATGTCGTATGTTCGTTGGTGTAGGTGAAGCTTCTTTCATTAGTCTTGCAGCTCCATTTATAGATGACAATGCTCCTCAAGAACAGAAAGCTGCATGGCTTGGACTGTTTTACATGTGTATACCAAGTGGTGTTGCTCTTGGTTATGTCTATGGCGGATACGTAGGAAAACATTTTAGTTGGCGGTATGCGTTTTGGGGTGAAGCTGTTTTAATGGCTCCATTTGCTGTTCTTGGTTTTTTAATGAAACCTTTACAGTTAAAAGGATCAGAGACATTGAAAAACAACAATCGTCTTCAGGTTGATAATGAGATTGAGCATGACCAGTTTGAGGTCTCAATTGAAACTAGCAAGTCAAGTTATGCGAACGCGGTTTTCAAATCATTTACTGGCTTTGCAAAAGACATGAAAGTTCTGTATAAAGAAAAGGTCTTTGTTGTTAATGTCTTAGGTTATGTATCATACAATTTCGTTATAGGAGCATACTCATATTGGGGACCAAAGGCTGGTTATAACATTTATAAAATGAAAAACGCAGATATGATCTTTGGGGCAGTAACTATCATTTGTGGGATCGTTGGAACATTATCAGGAGGCTTTATACTTGATCGTGTTACTGCTACAATTCCAAATGCTTTTAAGCTCTTATCCGGAGCAACATTTCTCGGGGCGGTATTTTGCTTCACTGCATTTACCCTGAAGAGTTTATACGGTTTCATCGCTCTCTTTGCTTTAGGAGAGCTTCTTGTGTTTGCTACACAGGCTCCTGTAAACTATGTGTGTTTGCATTGTGTGAAACCAAGTTTACGACCATTATCAATGGCTATATCCACCGTCGCAATTCACATATTCGGCGATGTTCCTTCTTCGCCTCTTGTCGGTATCGTTCAGGATCATATCAACAGTTGGAGAAAAACCACACTGATTCTTACATCGATTCTGTTCTTAGCTGCTGCAATATGGTTTATAGGTAAAATAAATCTCAATTCTTTTTATTCAAATGATGAAAGCTTTCTGGTCCAAATCAAGCTTTTTGTTGCGAATTTGTGCTTTTGCAAGGGATATTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 OATP

Protein Analysis

510

Amino Acids

55.67

Weight (kDa)

8.1

Isoelectric Point (pI)

31.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	91 - 436	3e-33	Major Facilitator Superfamily
OATP	PF03137	149 - 387	6.1e-23	Organic Anion Transporter Polypeptide (OATP) family
OATP	PF03137	389 - 453	2.7e-06	Organic Anion Transporter Polypeptide (OATP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22730 AT2G22730 AT2G22730 AT2G22730 AT2G22730 AT2G22730 AT2G22730 AT5G65687
fragaria_vesca	FvH4_1g18801 FvH4_1g18801 FvH4_2g08420
malus_domestica	MD01G1046600.v1.1 MD16G1281900.v1.1
prunus_persica	Prupe.6G211400_v2.0.a1 Prupe.6G211400_v2.0.a1 Prupe.6G211400_v2.0.a1 Prupe.6G211400_v2.0.a1 Prupe.6G211400_v2.0.a1 Prupe.6G211400_v2.0.a1
pyrus_communis	pycom01g07260 pycom16g25150
rosa_chinensis	RchiOBHm_Chr2g0109661 RchiOBHm_Chr6g0275801 RchiOBHm_Chr6g0281511
rosa_laevigata	RLG00000002545 RLG00000004204 RLG00000007462 RLG00000017754 RLG00000028802
rosa_multiflora	Rmu_sc0000332.1_g000061
rosa_roxburghii	Rroxscaffold_1G00028320 Rroxscaffold_2G00087940 Rroxscaffold_2G00134050 Rroxscaffold_4G00322130
rosa_rugosa	Rorug01G0117300 Rorug02G0161700 Rorug07G0244800
rosa_samantha	Rh1BG113800 Rh2AG213900 Rh2BG162700 Rh2BG162900 Rh2BG224300 Rh2BG338500 Rh2CG216300 Rh2DG219500 Rh7BG405800
rosa_wichuraiana	Rw1G007880 Rw4G022910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	975, 984
AccB7I	CCANNNNNTGG	1 cut(s)	968
AccI	GTMKAC	1 cut(s)	583
AccII	CGCG	1 cut(s)	833
AccIII	TCCGGA	1 cut(s)	1112
AciI	CCGC	5 cut(s)	86, 618, 646, 833, 1133
AclWI	GGATC	4 cut(s)	201, 736, 1043, 1362
AcsI	RAATTY	2 cut(s)	276, 1504
AcuI	CTGAAG	2 cut(s)	743, 1181
AfaI	GTAC	1 cut(s)	232
AfiI	CCNNNNNNNGG	3 cut(s)	793, 968, 1340
AflIII	ACRYGT	1 cut(s)	576
AgsI	TTSAA	4 cut(s)	742, 806, 841, 1461
AjiI	CACGTC	1 cut(s)	48
AjnI	CCWGG	1 cut(s)	233
AjuI	GAANNNNNNNTTGG	2 cut(s)	352, 384
Alw26I	GTCTC	4 cut(s)	35, 89, 728, 802
AlwI	GGATC	4 cut(s)	201, 736, 1043, 1362
Ama87I	CYCGRG	1 cut(s)	1127
Aor13HI	TCCGGA	1 cut(s)	1112
ApeKI	GCWGC	4 cut(s)	512, 554, 1412, 1415
ApoI	RAATTY	2 cut(s)	276, 1504
Asp700I	GAANNNNTTC	1 cut(s)	1473
AspS9I	GGNCC	2 cut(s)	959, 1480
AsuHPI	GGTGA	5 cut(s)	16, 169, 348, 500, 674
AsuII	TTCGAA	1 cut(s)	306
AvaI	CYCGRG	1 cut(s)	1127
AvaII	GGWCC	2 cut(s)	959, 1480
BarI	GAAGNNNNNNTAC	2 cut(s)	1154, 1186
BbsI	GAAGAC	1 cut(s)	749
BbvI	GCAGC	4 cut(s)	524, 541, 1399, 1402
BccI	CCATC	1 cut(s)	305
BciT130I	CCWGG	1 cut(s)	235
BciVI	GTATCC	1 cut(s)	614
BcoDI	GTCTC	4 cut(s)	35, 89, 728, 802
BfaI	CTAG	1 cut(s)	810
BfuI	GTATCC	1 cut(s)	614
BisI	GCNGC	4 cut(s)	513, 555, 1413, 1416
BlsI	GCNGC	4 cut(s)	514, 556, 1414, 1417
Bme1390I	CCNGG	1 cut(s)	235
Bme18I	GGWCC	2 cut(s)	959, 1480
BmeT110I	CYCGRG	1 cut(s)	1127
BmgBI	CACGTC	1 cut(s)	48
BmgT120I	GGNCC	2 cut(s)	959, 1480
BmiI	GGNNCC	3 cut(s)	681, 960, 1227
BmrFI	CCNGG	1 cut(s)	235
BmsI	GCATC	1 cut(s)	362
BpiI	GAAGAC	1 cut(s)	749
Bpu14I	TTCGAA	1 cut(s)	306
BpuEI	CTTGAG	1 cut(s)	525
Bsa29I	ATCGAT	1 cut(s)	1397
BsaAI	YACGTR	1 cut(s)	625
BsaI	GGTCTC	2 cut(s)	35, 802
BsaWI	WCCGGW	1 cut(s)	1112
BsaXI	ACNNNNNCTCC	4 cut(s)	32, 62, 1210, 1240
Bsc4I	CCNNNNNNNGG	3 cut(s)	793, 968, 1340
Bse1I	ACTGG	4 cut(s)	159, 277, 787, 856
Bse3DI	GCAATG	1 cut(s)	220
BseAI	TCCGGA	1 cut(s)	1112
BseBI	CCWGG	1 cut(s)	235
BseCI	ATCGAT	1 cut(s)	1397
BseLI	CCNNNNNNNGG	3 cut(s)	793, 968, 1340
BseMI	GCAATG	1 cut(s)	220
BseNI	ACTGG	4 cut(s)	159, 277, 787, 856
BseRI	GAGGAG	1 cut(s)	528
BseXI	GCAGC	4 cut(s)	524, 541, 1399, 1402
Bsh1236I	CGCG	1 cut(s)	833
BshVI	ATCGAT	1 cut(s)	1397
BsiHKCI	CYCGRG	1 cut(s)	1127
BsiSI	CCGG	1 cut(s)	1113
BslFI	GGGAC	2 cut(s)	297, 972
BslI	CCNNNNNNNGG	3 cut(s)	793, 968, 1340
BsmAI	GTCTC	4 cut(s)	35, 89, 728, 802
BsmFI	GGGAC	2 cut(s)	297, 972
Bso31I	GGTCTC	2 cut(s)	35, 802
BsoBI	CYCGRG	1 cut(s)	1127
Bsp119I	TTCGAA	1 cut(s)	306
Bsp13I	TCCGGA	1 cut(s)	1112
Bsp143I	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
BspACI	CCGC	5 cut(s)	86, 618, 646, 833, 1133
BspDI	ATCGAT	1 cut(s)	1397
BspEI	TCCGGA	1 cut(s)	1112
BspFNI	CGCG	1 cut(s)	833
BspLI	GGNNCC	3 cut(s)	681, 960, 1227
BspPI	GGATC	4 cut(s)	201, 736, 1043, 1362
BspT104I	TTCGAA	1 cut(s)	306
BspTNI	GGTCTC	2 cut(s)	35, 802
BsrDI	GCAATG	1 cut(s)	220
BsrI	ACTGG	4 cut(s)	159, 277, 787, 856
BssMI	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
BssNAI	GTATAC	1 cut(s)	584
Bst1107I	GTATAC	1 cut(s)	584
Bst2UI	CCWGG	1 cut(s)	235
Bst4CI	ACNGT	7 cut(s)	100, 406, 570, 720, 1175, 1297, 1367
Bst6I	CTCTTC	1 cut(s)	1157
BstBAI	YACGTR	1 cut(s)	625
BstBI	TTCGAA	1 cut(s)	306
BstC8I	GCNNGC	1 cut(s)	211
BstDEI	CTNAG	4 cut(s)	109, 296, 910, 1408
BstEII	GGTNACC	1 cut(s)	4
BstFNI	CGCG	1 cut(s)	833
BstKTI	GATC	7 cut(s)	162, 196, 731, 1008, 1038, 1072, 1357
BstMAI	GTCTC	4 cut(s)	35, 89, 728, 802
BstMBI	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
BstMWI	GCNNNNNNNGC	4 cut(s)	374, 686, 1190, 1223
BstNI	CCWGG	1 cut(s)	235
BstNSI	RCATGY	1 cut(s)	580
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	1 cut(s)	233
BstSNI	TACGTA	1 cut(s)	625
BstUI	CGCG	1 cut(s)	833
BstV1I	GCAGC	4 cut(s)	524, 541, 1399, 1402
BstV2I	GAAGAC	1 cut(s)	749
BstZ17I	GTATAC	1 cut(s)	584
Bsu15I	ATCGAT	1 cut(s)	1397
BsuI	GTATCC	1 cut(s)	614
BsuTUI	ATCGAT	1 cut(s)	1397
BtgZI	GCGATG	2 cut(s)	1165, 1332
BtrI	CACGTC	1 cut(s)	48
BtsI	GCAGTG	1 cut(s)	1146
BtsIMutI	CAGTG	2 cut(s)	1146, 1382
Cac8I	GCNNGC	1 cut(s)	211
Cfr13I	GGNCC	2 cut(s)	959, 1480
ClaI	ATCGAT	1 cut(s)	1397
Csp6I	GTAC	1 cut(s)	231
CviAII	CATG	5 cut(s)	190, 558, 577, 782, 868
CviQI	GTAC	1 cut(s)	231
DdeI	CTNAG	4 cut(s)	109, 296, 910, 1408
DpnI	GATC	7 cut(s)	161, 195, 730, 1007, 1037, 1071, 1356
DpnII	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
Eam1104I	CTCTTC	1 cut(s)	1157
EarI	CTCTTC	1 cut(s)	1157
EciI	GGCGGA	1 cut(s)	633
Eco105I	TACGTA	1 cut(s)	625
Eco31I	GGTCTC	2 cut(s)	35, 802
Eco47I	GGWCC	2 cut(s)	959, 1480
Eco57I	CTGAAG	2 cut(s)	743, 1181
Eco88I	CYCGRG	1 cut(s)	1127
Eco91I	GGTNACC	1 cut(s)	4
EcoO65I	GGTNACC	1 cut(s)	4
EcoRI	GAATTC	1 cut(s)	276
EcoRII	CCWGG	1 cut(s)	233
FaeI	CATG	5 cut(s)	193, 561, 580, 785, 871
FalI	AAGNNNNNCTT	2 cut(s)	9, 41
FaqI	GGGAC	2 cut(s)	297, 972
FatI	CATG	5 cut(s)	189, 557, 576, 781, 867
FblI	GTMKAC	1 cut(s)	583
Fnu4HI	GCNGC	4 cut(s)	513, 555, 1413, 1416
Fsp4HI	GCNGC	4 cut(s)	513, 555, 1413, 1416
FspBI	CTAG	1 cut(s)	810
GluI	GCNGC	4 cut(s)	513, 555, 1413, 1416
HapII	CCGG	1 cut(s)	1113
Hin1II	CATG	5 cut(s)	193, 561, 580, 785, 871
HindIII	AAGCTT	4 cut(s)	106, 492, 1471, 1490
HinfI	GANTC	3 cut(s)	122, 1387, 1399
HpaII	CCGG	1 cut(s)	1113
HphI	GGTGA	5 cut(s)	16, 169, 348, 500, 674
Hpy166II	GTNNAC	3 cut(s)	584, 1234, 1268
Hpy188I	TCNGA	2 cut(s)	104, 733
Hpy188III	TCNNGA	5 cut(s)	51, 542, 1053, 1113, 1352
Hpy8I	GTNNAC	3 cut(s)	584, 1234, 1268
Hpy99I	CGWCG	3 cut(s)	52, 122, 1301
HpyAV	CCTTC	2 cut(s)	35, 1335
HpyCH4III	ACNGT	7 cut(s)	100, 406, 570, 720, 1175, 1297, 1367
HpyCH4IV	ACGT	2 cut(s)	47, 624
HpyF10VI	GCNNNNNNNGC	4 cut(s)	374, 686, 1190, 1223
HpyF3I	CTNAG	4 cut(s)	109, 296, 910, 1408
HpySE526I	ACGT	2 cut(s)	47, 624
Hsp92II	CATG	5 cut(s)	193, 561, 580, 785, 871
Kpn2I	TCCGGA	1 cut(s)	1112
Kzo9I	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
LmnI	GCTCC	6 cut(s)	520, 541, 685, 941, 1115, 1231
Lsp1109I	GCAGC	4 cut(s)	524, 541, 1399, 1402
LweI	GCATC	1 cut(s)	362
MaeI	CTAG	1 cut(s)	810
MaeII	ACGT	2 cut(s)	47, 624
MaeIII	GTNAC	5 cut(s)	4, 34, 150, 1018, 1075
MalI	GATC	7 cut(s)	161, 195, 730, 1007, 1037, 1071, 1356
MboI	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
MfeI	CAATTG	1 cut(s)	801
MluCI	AATT	8 cut(s)	276, 301, 801, 928, 1086, 1302, 1447, 1504
MmeI	TCCRAC	3 cut(s)	319, 1021, 1349
MnlI	CCTC	6 cut(s)	39, 142, 549, 787, 1049, 1344
MroI	TCCGGA	1 cut(s)	1112
MroXI	GAANNNNTTC	1 cut(s)	1473
MseI	TTAA	9 cut(s)	174, 182, 291, 401, 674, 704, 722, 903, 1101
MspI	CCGG	1 cut(s)	1113
MspR9I	CCNGG	1 cut(s)	235
MunI	CAATTG	1 cut(s)	801
MvaI	CCWGG	1 cut(s)	235
MvnI	CGCG	1 cut(s)	833
MwoI	GCNNNNNNNGC	4 cut(s)	374, 686, 1190, 1223
NdeII	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
NlaIII	CATG	5 cut(s)	193, 561, 580, 785, 871
NlaIV	GGNNCC	3 cut(s)	681, 960, 1227
NmuCI	GTSAC	1 cut(s)	4
NspI	RCATGY	1 cut(s)	580
NspV	TTCGAA	1 cut(s)	306
PciI	ACATGT	1 cut(s)	576
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PdmI	GAANNNNTTC	1 cut(s)	1473
PfeI	GAWTC	3 cut(s)	122, 1387, 1399
PflFI	GACNNNGTC	1 cut(s)	46
PflMI	CCANNNNNTGG	1 cut(s)	968
PkrI	GCNGC	4 cut(s)	514, 556, 1414, 1417
Ppu21I	YACGTR	1 cut(s)	625
PscI	ACATGT	1 cut(s)	576
PsiI	TTATAA	2 cut(s)	975, 984
Psp6I	CCWGG	1 cut(s)	233
PspEI	GGTNACC	1 cut(s)	4
PspGI	CCWGG	1 cut(s)	233
PspN4I	GGNNCC	3 cut(s)	681, 960, 1227
PspPI	GGNCC	2 cut(s)	959, 1480
PsyI	GACNNNGTC	1 cut(s)	46
RsaI	GTAC	1 cut(s)	232
RsaNI	GTAC	1 cut(s)	231
SaqAI	TTAA	9 cut(s)	174, 182, 291, 401, 674, 704, 722, 903, 1101
SatI	GCNGC	4 cut(s)	513, 555, 1413, 1416
Sau3AI	GATC	7 cut(s)	159, 193, 728, 1005, 1035, 1069, 1354
Sau96I	GGNCC	2 cut(s)	959, 1480
ScrFI	CCNGG	1 cut(s)	235
SfaNI	GCATC	1 cut(s)	362
SfuI	TTCGAA	1 cut(s)	306
SinI	GGWCC	2 cut(s)	959, 1480
SmlI	CTYRAG	1 cut(s)	540
SmoI	CTYRAG	1 cut(s)	540
SnaBI	TACGTA	1 cut(s)	625
Sse9I	AATT	8 cut(s)	276, 301, 801, 928, 1086, 1302, 1447, 1504
SsiI	CCGC	5 cut(s)	86, 618, 646, 833, 1133
SspMI	CTAG	1 cut(s)	810
StyD4I	CCNGG	1 cut(s)	233
TaaI	ACNGT	7 cut(s)	100, 406, 570, 720, 1175, 1297, 1367
TaiI	ACGT	2 cut(s)	50, 627
TaqI	TCGA	4 cut(s)	50, 120, 306, 1397
TasI	AATT	8 cut(s)	276, 301, 801, 928, 1086, 1302, 1447, 1504
TfiI	GAWTC	3 cut(s)	122, 1387, 1399
Tru1I	TTAA	9 cut(s)	174, 182, 291, 401, 674, 704, 722, 903, 1101
Tru9I	TTAA	9 cut(s)	174, 182, 291, 401, 674, 704, 722, 903, 1101
TscAI	CASTG	2 cut(s)	1153, 1389
TseFI	GTSAC	1 cut(s)	4
TseI	GCWGC	4 cut(s)	512, 554, 1412, 1415
Tsp45I	GTSAC	1 cut(s)	4
TspDTI	ATGAA	9 cut(s)	318, 360, 490, 722, 884, 1004, 1168, 1482, 1518
TspGWI	ACGGA	1 cut(s)	53
TspRI	CASTG	2 cut(s)	1153, 1389
Tth111I	GACNNNGTC	1 cut(s)	46
Van91I	CCANNNNNTGG	1 cut(s)	968
VpaK11BI	GGWCC	2 cut(s)	959, 1480
XapI	RAATTY	2 cut(s)	276, 1504
XceI	RCATGY	1 cut(s)	580
XmiI	GTMKAC	1 cut(s)	583
XmnI	GAANNNNTTC	1 cut(s)	1473
XspI	CTAG	1 cut(s)	810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.