Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000624

Physical Location & Seq

Genomic Coordinates Forward (+)

12481664 .. 12484420

Gene Structure 2757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G29060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGGTTCTTACTCAGCTGGCTTCCCTGGATCCTTGGACTGGTTTGATTTTCCCGGTTTAGGAAACGGATCCTATCTAAATGATCAACCTTTGTTAGATATTGGATCTGTTCCTCCTCCTCTAGACCCATATCCTCAACAGAATCTTGCTTCTGCGGATGCTGATTTCTCTGATTCTGTTTTGAAGTACATAAGCCAAGTTCTTATGGAAGAGGACATGGAAGATAAGCCTTGTATGTTTCATGATGCTTTATCTCTTCAAGCAGCTGAGAAGTCTCTCTATGAAGCTCTCGGCGAGAAGTACCCGGTTGATGATTCTGATCAGCCTCTGACTACTACTACTAGCCTTGCTCAATTGGTTAGTAGTCCTGGTGGTTCTTCTTATGCTTCAAGCACCACAACCACTTCCTCTGATTCACAATGGAGTTTTGATTGTTTGGAGAATAATAGGCCTTCTTCTTGGTTGCAGACACCGATCCCGAGTAACTTCATTTTTCAGTCTACATCTACTAGAGCCAGTAGCGGTAACGCGGTTTTCGGGTCAAGTTTTAGCGGTGATTTGGTTTCTAATATGTTTAATGATACTGACTTGGCGTTACAATTCAAGAAAGGGATGGAGGAAGCTAGTAAATTCCTTCCTAAGAGCTCTCAGTTGGTTATAGATAACTCTGTTCCTAACAGATTAACCGGAAAGAAGAGCCATTGGCGCGAAGAAGAACATTTGACTGAAGAAAGAAGTAAGAAACAATCTGCTATTTATGTTGATGAAACTGATGAGCTTACTGATATGTTTGACAATATTCTGATATTTGGCGAGGCTAAGGAACAACCTGTATGCATTCTTAACGAGAGTTTCCCTAAGGAACCTGCGAAAGCTTCAACGTTTAGTAAGAGTCCTAAAGGCGAAAAACCGGAAGCTAGTGGTAACAGTTATACAAAAGAGACACCTGATTTGAGGACAATGCTGGTTTCTTGTGCTCAAGCTGTTTCGATTAACGATCGTAGAACTGCTGACGAGCTGTTAAGTCGGATAAGGCAACATTCTTCATCTTACGGCGATGGAACAGAGAGATTGGCTCATTATTTTGCTAACAGTCTTGAAGCACGTTTGGCTGGGATAGGTACACAGGTTTATACTGCCTTGTCTTCCAAGAAAACATCTACTTCTGACATGTTGAAAGCTTATCAGACATATATATCAGTCTGTCCGTTCAAGAAAATCGCAATCATATTCGCCAACCATAGTATTATGCGGTTGGCTTCAAGTGCTAATGCCAAAACCATCCACATCATAGATTTTGGAATATCTGATGGTTTCCAGTGGCCTTCTCTGATTCATCGACTTGCTTGGAGACGTGGTTCATCTTGTAAGCTTCGGATAACCGGTATAGAGTTGCCTCAACGTGGTTTTAGACCAGCCGAGGGAGTTATTGAGACTGGTCGTCGCTTGGCTAAGTATTGTCAGAAGTTCAATATTCCGTTTGAGTACAATGCGATTGCGCAGAAATGGGAATCAATCAAGTTGGAGGACTTGAAGCTAAAAGAAGGCGAGTTTGTTGCGGTAAACTCTTTATTTCGGTTTAGGAATCTTCTAGATGAGACGGTGGCAGTGCATAGCCCGAGAGATACGGTTTTGAAGCTGATAAGGAAGATAAAGCCAGACGTGTTCATCCCCGGGATCCTCAGCGGATCCTACAACGCGCCTTTCTTTGTCACGAGGTTTAGAGAAGTTCTGTTTCATTACTCATCTCTGTTTGACATGTGTGACACGAATCTAACACGGGAAGATCCAATGAGGGTTATGTTTGAGAAAGAGTTCTATGGGCGGGAGATCATGAACGTGGTGGCGTGTGAGGGGACGGAGAGAGTGGAGAGGCCAGAGAGTTATAAGCAGTGGCAGGCGAGGGCGATGAGAGCCGGGTTTAGACAGATTCCGCTGGAGAAGGAACTAGTTCAGAAACTGAAGTTGATGGTGGAAAGTGGATACAAACCCAAAGAGTTTGATGTTGATCAAGATTGTCACTGGTTGCTTCAGGGCTGGAAAGGTAGAATTGTATACGGTTCATCTATTTGGGTTCCTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009410 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

694

Amino Acids

78.1

Weight (kDa)

5.75

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	318 - 691	3.6e-116	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07530 AT2G29060 AT2G29060
fragaria_vesca	FvH4_3g36540 FvH4_3g36550 FvH4_3g36570 FvH4_3g36580 FvH4_3g36630 FvH4_3g36641 FvH4_3g36660 FvH4_3g36660 FvH4_3g36661 FvH4_5g17360
malus_domestica	MD03G1089800.v1.1 MD11G1099100.v1.1
prunus_persica	Prupe.6G074000_v2.0.a1
pyrus_communis	pycom03g07140 pycom11g08330
rosa_chinensis	RchiOBHm_Chr5g0065461 RchiOBHm_Chr5g0065481 RchiOBHm_Chr5g0065491 RchiOBHm_Chr5g0065511 RchiOBHm_Chr5g0065531 RchiOBHm_Chr5g0065541 RchiOBHm_Chr5g0065561
rosa_laevigata	RLG00000035789 RLG00000035792 RLG00000035794 RLG00000035795 RLG00000035796 RLG00000035797
rosa_multiflora	Rmu_co8062944.1_g000001 Rmu_co8409941.1_g000001 Rmu_sc0001010.1_g000064 Rmu_sc0001010.1_g000077 Rmu_sc0001010.1_g000086 Rmu_sc0001010.1_g000088
rosa_roxburghii	Rroxscaffold_1G00015650 Rroxscaffold_1G00015680 Rroxscaffold_1G00015730 Rroxscaffold_1G00015750
rosa_rugosa	Rorug05G0372200 Rorug05G0372300.1 Rorug05G0372400 Rorug05G0372500
rosa_samantha	Rh5AG429900 Rh5AG430000 Rh5AG430400 Rh5AG430500 Rh5AG430600 Rh5BG445100 Rh5BG445400 Rh5BG445900 Rh5BG446200 Rh5BG446300 Rh5BG446500 Rh5BG446600 Rh5CG467300 Rh5CG467600 Rh5CG467900 Rh5CG468200 Rh5CG468300 Rh5CG468500 Rh5CG468600 Rh5DG457500 Rh5DG457700 Rh5DG457800 Rh5DG457900 Rh5DG458300 Rh5DG458600 Rh5DG458700 Rh5DG459000 Rh5DG459200
rosa_wichuraiana	Rw5G040340 Rw5G040350 Rw5G040360 Rw5G040370 Rw5G040400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1887
Acc16I	TGCGCA	1 cut(s)	1500
Acc36I	ACCTGC	1 cut(s)	874
AccI	GTMKAC	2 cut(s)	500, 2055
AccII	CGCG	3 cut(s)	530, 708, 1700
AciI	CCGC	9 cut(s)	155, 522, 530, 552, 1252, 1559, 1686, 1825, 1934
AclI	AACGTT	1 cut(s)	881
AcsI	RAATTY	1 cut(s)	629
AcuI	CTGAAG	3 cut(s)	747, 1982, 2015
AfaI	GTAC	4 cut(s)	188, 302, 1123, 1487
AfiI	CCNNNNNNNGG	4 cut(s)	39, 59, 1403, 1421
AflIII	ACRYGT	3 cut(s)	1170, 1662, 1758
AgeI	ACCGGT	1 cut(s)	1382
AhdI	GACNNNNNGTC	1 cut(s)	1440
AhlI	ACTAGT	1 cut(s)	1948
AjiI	CACGTC	2 cut(s)	1355, 1663
AjnI	CCWGG	2 cut(s)	25, 367
AloI	GAACNNNNNNTCC	2 cut(s)	1342, 1374
Alw21I	GWGCWC	2 cut(s)	647, 979
Alw26I	GTCTC	5 cut(s)	279, 935, 1345, 1427, 1592
AlwNI	CAGNNNCTG	2 cut(s)	328, 1960
Ama87I	CYCGRG	3 cut(s)	478, 1618, 1673
AoxI	GGCC	3 cut(s)	449, 1322, 1874
ApeKI	GCWGC	1 cut(s)	263
ApoI	RAATTY	1 cut(s)	629
ArsI	GACNNNNNNTTYG	2 cut(s)	934, 966
AsiGI	ACCGGT	1 cut(s)	1382
Asp700I	GAANNNNTTC	2 cut(s)	1814, 1950
AspLEI	GCGC	3 cut(s)	708, 1501, 1702
AsuC2I	CCSGG	5 cut(s)	54, 305, 1674, 1675, 1918
AsuHPI	GGTGA	1 cut(s)	566
AvaI	CYCGRG	3 cut(s)	478, 1618, 1673
AxyI	CCTNAGG	1 cut(s)	858
BaeI	ACNNNNGTAYC	2 cut(s)	1113, 1146
BamHI	GGATCC	4 cut(s)	29, 68, 1677, 1688
BanII	GRGCYC	1 cut(s)	647
BauI	CACGAG	1 cut(s)	1714
BbsI	GAAGAC	1 cut(s)	1137
Bbv12I	GWGCWC	2 cut(s)	647, 979
BbvCI	CCTCAGC	1 cut(s)	1682
BbvI	GCAGC	1 cut(s)	275
BccI	CCATC	5 cut(s)	607, 1052, 1289, 1304, 1963
BceAI	ACGGC	1 cut(s)	1069
BcgI	CGANNNNNNTGC	2 cut(s)	1538, 1572
BciT130I	CCWGG	2 cut(s)	27, 369
BciVI	GTATCC	1 cut(s)	1976
BclI	TGATCA	3 cut(s)	82, 319, 2008
BcnI	CCSGG	5 cut(s)	54, 305, 1674, 1675, 1918
BcoDI	GTCTC	5 cut(s)	279, 935, 1345, 1427, 1592
BcuI	ACTAGT	1 cut(s)	1948
BfaI	CTAG	7 cut(s)	122, 342, 510, 624, 918, 1592, 1949
BfuAI	ACCTGC	1 cut(s)	874
BfuI	GTATCC	1 cut(s)	1976
BisI	GCNGC	1 cut(s)	264
BlsI	GCNGC	1 cut(s)	265
Bme1390I	CCNGG	7 cut(s)	27, 54, 305, 369, 1674, 1675, 1918
BmeRI	GACNNNNNGTC	1 cut(s)	1440
BmeT110I	CYCGRG	3 cut(s)	478, 1618, 1673
BmgBI	CACGTC	2 cut(s)	1355, 1663
BmiI	GGNNCC	6 cut(s)	31, 70, 864, 1679, 1690, 2076
BmrFI	CCNGG	7 cut(s)	27, 54, 305, 369, 1674, 1675, 1918
BmsI	GCATC	2 cut(s)	148, 235
BpiI	GAAGAC	1 cut(s)	1137
BplI	GAGNNNNNCTC	2 cut(s)	1060, 1092
BpmI	CTGGAG	1 cut(s)	1958
Bpu10I	CCTNAGC	2 cut(s)	819, 1682
BpuEI	CTTGAG	1 cut(s)	963
BpuMI	CCSGG	5 cut(s)	54, 305, 1674, 1675, 1918
BsaBI	GATNNNNATC	2 cut(s)	318, 2007
BsaJI	CCNNGG	5 cut(s)	25, 33, 1419, 1672, 1673
BsaWI	WCCGGW	3 cut(s)	686, 910, 1382
BsaXI	ACNNNNNCTCC	2 cut(s)	1342, 1372
Bsc4I	CCNNNNNNNGG	4 cut(s)	39, 59, 1403, 1421
Bse118I	RCCGGY	1 cut(s)	1382
Bse1I	ACTGG	5 cut(s)	44, 516, 1318, 1441, 2027
Bse21I	CCTNAGG	1 cut(s)	858
Bse8I	GATNNNNATC	2 cut(s)	318, 2007
BseBI	CCWGG	2 cut(s)	27, 369
BseDI	CCNNGG	5 cut(s)	25, 33, 1419, 1672, 1673
BseGI	GGATG	4 cut(s)	163, 618, 1281, 1668
BseJI	GATNNNNATC	2 cut(s)	318, 2007
BseLI	CCNNNNNNNGG	4 cut(s)	39, 59, 1403, 1421
BseMII	CTCAG	4 cut(s)	27, 258, 662, 1696
BseNI	ACTGG	5 cut(s)	44, 516, 1318, 1441, 2027
BseRI	GAGGAG	2 cut(s)	105, 108
BseXI	GCAGC	1 cut(s)	275
BseYI	CCCAGC	1 cut(s)	1112
Bsh1236I	CGCG	3 cut(s)	530, 708, 1700
Bsh1285I	CGRYCG	1 cut(s)	1000
BshFI	GGCC	3 cut(s)	451, 1324, 1876
BshTI	ACCGGT	1 cut(s)	1382
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	2 cut(s)	647, 979
BsiHKCI	CYCGRG	3 cut(s)	478, 1618, 1673
BsiSI	CCGG	7 cut(s)	54, 305, 687, 911, 1383, 1674, 1917
BslFI	GGGAC	1 cut(s)	1870
BslI	CCNNNNNNNGG	4 cut(s)	39, 59, 1403, 1421
BsmAI	GTCTC	5 cut(s)	279, 935, 1345, 1427, 1592
BsmBI	CGTCTC	2 cut(s)	1345, 1592
BsmFI	GGGAC	1 cut(s)	1870
BsmI	GAATGC	1 cut(s)	837
BsnI	GGCC	3 cut(s)	451, 1324, 1876
BsoBI	CYCGRG	3 cut(s)	478, 1618, 1673
Bsp1286I	GDGCHC	2 cut(s)	647, 979
BspACI	CCGC	9 cut(s)	155, 522, 530, 552, 1252, 1559, 1686, 1825, 1934
BspANI	GGCC	3 cut(s)	451, 1324, 1876
BspCNI	CTCAG	4 cut(s)	26, 259, 661, 1695
BspFNI	CGCG	3 cut(s)	530, 708, 1700
BspHI	TCATGA	2 cut(s)	241, 1833
BspLI	GGNNCC	6 cut(s)	31, 70, 864, 1679, 1690, 2076
BspMI	ACCTGC	1 cut(s)	874
BspQI	GCTCTTC	1 cut(s)	689
BsrFI	RCCGGY	1 cut(s)	1382
BsrI	ACTGG	5 cut(s)	44, 516, 1318, 1441, 2027
BssAI	RCCGGY	1 cut(s)	1382
BssECI	CCNNGG	5 cut(s)	25, 33, 1419, 1672, 1673
BssNAI	GTATAC	1 cut(s)	2056
BssSI	CACGAG	1 cut(s)	1714
BssT1I	CCWWGG	1 cut(s)	33
Bst1107I	GTATAC	1 cut(s)	2056
Bst2BI	CACGAG	1 cut(s)	1714
Bst2UI	CCWGG	2 cut(s)	27, 369
Bst4CI	ACNGT	5 cut(s)	929, 1094, 1603, 1630, 2060
Bst6I	CTCTTC	3 cut(s)	204, 261, 689
BstC8I	GCNNGC	2 cut(s)	19, 1899
BstDEI	CTNAG	8 cut(s)	13, 267, 639, 648, 819, 858, 1452, 1682
BstF5I	GGATG	4 cut(s)	163, 618, 1281, 1668
BstFNI	CGCG	3 cut(s)	530, 708, 1700
BstHHI	GCGC	3 cut(s)	708, 1501, 1702
BstMAI	GTCTC	5 cut(s)	279, 935, 1345, 1427, 1592
BstMCI	CGRYCG	1 cut(s)	1000
BstMWI	GCNNNNNNNGC	4 cut(s)	705, 1109, 1265, 1913
BstNI	CCWGG	2 cut(s)	27, 369
BstNSI	RCATGY	2 cut(s)	1174, 1762
BstSCI	CCNGG	7 cut(s)	25, 52, 303, 367, 1672, 1673, 1916
BstUI	CGCG	3 cut(s)	530, 708, 1700
BstV1I	GCAGC	1 cut(s)	275
BstV2I	GAAGAC	1 cut(s)	1137
BstX2I	RGATCY	6 cut(s)	29, 68, 104, 1677, 1688, 1786
BstYI	RGATCY	6 cut(s)	29, 68, 104, 1677, 1688, 1786
BstZ17I	GTATAC	1 cut(s)	2056
Bsu36I	CCTNAGG	1 cut(s)	858
BsuI	GTATCC	1 cut(s)	1976
BsuRI	GGCC	3 cut(s)	451, 1324, 1876
BtgZI	GCGATG	2 cut(s)	1071, 1922
BtrI	CACGTC	2 cut(s)	1355, 1663
BtsCI	GGATG	4 cut(s)	163, 618, 1281, 1668
BtsI	GCAGTG	2 cut(s)	1614, 1898
BtsIMutI	CAGTG	4 cut(s)	1325, 1614, 1898, 2020
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	2 cut(s)	19, 1899
CaiI	CAGNNNCTG	2 cut(s)	328, 1960
CciI	TCATGA	2 cut(s)	241, 1833
CfoI	GCGC	3 cut(s)	708, 1501, 1702
Cfr10I	RCCGGY	1 cut(s)	1382
Cfr9I	CCCGGG	1 cut(s)	1673
Csp6I	GTAC	4 cut(s)	187, 301, 1122, 1486
CspAI	ACCGGT	1 cut(s)	1382
CviAII	CATG	5 cut(s)	217, 242, 1171, 1759, 1834
CviQI	GTAC	4 cut(s)	187, 301, 1122, 1486
DdeI	CTNAG	8 cut(s)	13, 267, 639, 648, 819, 858, 1452, 1682
DriI	GACNNNNNGTC	1 cut(s)	1440
Eam1104I	CTCTTC	3 cut(s)	204, 261, 689
Eam1105I	GACNNNNNGTC	1 cut(s)	1440
EarI	CTCTTC	3 cut(s)	204, 261, 689
Ecl136II	GAGCTC	1 cut(s)	645
Eco130I	CCWWGG	1 cut(s)	33
Eco147I	AGGCCT	1 cut(s)	451
Eco24I	GRGCYC	1 cut(s)	647
Eco53kI	GAGCTC	1 cut(s)	645
Eco57I	CTGAAG	3 cut(s)	747, 1982, 2015
Eco81I	CCTNAGG	1 cut(s)	858
Eco88I	CYCGRG	3 cut(s)	478, 1618, 1673
EcoICRI	GAGCTC	1 cut(s)	645
EcoRII	CCWGG	2 cut(s)	25, 367
EcoT14I	CCWWGG	1 cut(s)	33
EcoT22I	ATGCAT	1 cut(s)	839
EcoT38I	GRGCYC	1 cut(s)	647
ErhI	CCWWGG	1 cut(s)	33
Esp3I	CGTCTC	2 cut(s)	1345, 1592
FaeI	CATG	5 cut(s)	220, 245, 1174, 1762, 1837
FaqI	GGGAC	1 cut(s)	1870
FatI	CATG	5 cut(s)	216, 241, 1170, 1758, 1833
FauI	CCCGC	1 cut(s)	1818
FbaI	TGATCA	3 cut(s)	82, 319, 2008
FblI	GTMKAC	2 cut(s)	500, 2055
Fnu4HI	GCNGC	1 cut(s)	264
FokI	GGATG	4 cut(s)	170, 625, 1268, 1655
FriOI	GRGCYC	1 cut(s)	647
Fsp4HI	GCNGC	1 cut(s)	264
FspBI	CTAG	7 cut(s)	122, 342, 510, 624, 918, 1592, 1949
FspI	TGCGCA	1 cut(s)	1500
GlaI	GCGC	3 cut(s)	707, 1500, 1701
GluI	GCNGC	1 cut(s)	264
GsaI	CCCAGC	1 cut(s)	1116
GsuI	CTGGAG	1 cut(s)	1958
HaeIII	GGCC	3 cut(s)	451, 1324, 1876
HapII	CCGG	7 cut(s)	54, 305, 687, 911, 1383, 1674, 1917
HhaI	GCGC	3 cut(s)	708, 1501, 1702
Hin1II	CATG	5 cut(s)	220, 245, 1174, 1762, 1837
Hin6I	GCGC	3 cut(s)	706, 1499, 1700
HinP1I	GCGC	3 cut(s)	706, 1499, 1700
HindIII	AAGCTT	3 cut(s)	873, 1179, 1370
HpaII	CCGG	7 cut(s)	54, 305, 687, 911, 1383, 1674, 1917
HphI	GGTGA	1 cut(s)	566
Hpy166II	GTNNAC	4 cut(s)	501, 1124, 1564, 2056
Hpy8I	GTNNAC	4 cut(s)	501, 1124, 1564, 2056
Hpy99I	CGWCG	1 cut(s)	1446
HpyAV	CCTTC	5 cut(s)	462, 644, 1335, 1538, 1936
HpyCH4III	ACNGT	5 cut(s)	929, 1094, 1603, 1630, 2060
HpyCH4IV	ACGT	6 cut(s)	881, 1105, 1354, 1402, 1662, 1839
HpyCH4V	TGCA	3 cut(s)	466, 837, 1612
HpyF10VI	GCNNNNNNNGC	4 cut(s)	705, 1109, 1265, 1913
HpyF3I	CTNAG	8 cut(s)	13, 267, 639, 648, 819, 858, 1452, 1682
HpySE526I	ACGT	6 cut(s)	881, 1105, 1354, 1402, 1662, 1839
Hsp92II	CATG	5 cut(s)	220, 245, 1174, 1762, 1837
HspAI	GCGC	3 cut(s)	706, 1499, 1700
Ksp22I	TGATCA	3 cut(s)	82, 319, 2008
LguI	GCTCTTC	1 cut(s)	689
Lsp1109I	GCAGC	1 cut(s)	275
LweI	GCATC	2 cut(s)	148, 235
MaeI	CTAG	7 cut(s)	122, 342, 510, 624, 918, 1592, 1949
MaeII	ACGT	6 cut(s)	881, 1105, 1354, 1402, 1662, 1839
MaeIII	GTNAC	7 cut(s)	482, 524, 594, 923, 1711, 1763, 2018
MfeI	CAATTG	1 cut(s)	353
MflI	RGATCY	6 cut(s)	29, 68, 104, 1677, 1688, 1786
MhlI	GDGCHC	2 cut(s)	647, 979
MluCI	AATT	4 cut(s)	353, 599, 629, 2049
MlyI	GAGTC	1 cut(s)	901
MmeI	TCCRAC	2 cut(s)	1007, 1503
Mph1103I	ATGCAT	1 cut(s)	839
MroXI	GAANNNNTTC	2 cut(s)	1814, 1950
MseI	TTAA	5 cut(s)	576, 683, 843, 993, 1022
MslI	CAYNNNNRTG	1 cut(s)	1838
MspA1I	CMGCKG	4 cut(s)	17, 266, 1686, 1936
MspI	CCGG	7 cut(s)	54, 305, 687, 911, 1383, 1674, 1917
MspR9I	CCNGG	7 cut(s)	27, 54, 305, 369, 1674, 1675, 1918
MunI	CAATTG	1 cut(s)	353
Mva1269I	GAATGC	1 cut(s)	837
MvaI	CCWGG	2 cut(s)	27, 369
MvnI	CGCG	3 cut(s)	530, 708, 1700
MwoI	GCNNNNNNNGC	4 cut(s)	705, 1109, 1265, 1913
NciI	CCSGG	5 cut(s)	54, 305, 1674, 1675, 1918
NlaIII	CATG	5 cut(s)	220, 245, 1174, 1762, 1837
NlaIV	GGNNCC	6 cut(s)	31, 70, 864, 1679, 1690, 2076
NmeAIII	GCCGAG	2 cut(s)	270, 1444
NmuCI	GTSAC	3 cut(s)	1711, 1763, 2018
NsbI	TGCGCA	1 cut(s)	1500
NsiI	ATGCAT	1 cut(s)	839
NspI	RCATGY	2 cut(s)	1174, 1762
PagI	TCATGA	2 cut(s)	241, 1833
PceI	AGGCCT	1 cut(s)	451
PciI	ACATGT	2 cut(s)	1170, 1758
PciSI	GCTCTTC	1 cut(s)	689
PctI	GAATGC	1 cut(s)	837
PdmI	GAANNNNTTC	2 cut(s)	1814, 1950
PfeI	GAWTC	9 cut(s)	142, 173, 314, 413, 1333, 1511, 1585, 1771, 1930
PinAI	ACCGGT	1 cut(s)	1382
PkrI	GCNGC	1 cut(s)	265
Ple19I	CGATCG	1 cut(s)	1000
PleI	GAGTC	1 cut(s)	900
PpsI	GAGTC	1 cut(s)	900
PscI	ACATGT	2 cut(s)	1170, 1758
PsiI	TTATAA	1 cut(s)	1887
Psp124BI	GAGCTC	1 cut(s)	647
Psp1406I	AACGTT	1 cut(s)	881
Psp6I	CCWGG	2 cut(s)	25, 367
PspFI	CCCAGC	1 cut(s)	1112
PspGI	CCWGG	2 cut(s)	25, 367
PspN4I	GGNNCC	6 cut(s)	31, 70, 864, 1679, 1690, 2076
PstNI	CAGNNNCTG	2 cut(s)	328, 1960
PsuI	RGATCY	6 cut(s)	29, 68, 104, 1677, 1688, 1786
PvuI	CGATCG	1 cut(s)	1000
PvuII	CAGCTG	2 cut(s)	17, 266
RsaI	GTAC	4 cut(s)	188, 302, 1123, 1487
RsaNI	GTAC	4 cut(s)	187, 301, 1122, 1486
RseI	CAYNNNNRTG	1 cut(s)	1838
SacI	GAGCTC	1 cut(s)	647
SapI	GCTCTTC	1 cut(s)	689
SaqAI	TTAA	5 cut(s)	576, 683, 843, 993, 1022
SatI	GCNGC	1 cut(s)	264
SchI	GAGTC	1 cut(s)	901
ScrFI	CCNGG	7 cut(s)	27, 54, 305, 369, 1674, 1675, 1918
SduI	GDGCHC	2 cut(s)	647, 979
SfaNI	GCATC	2 cut(s)	148, 235
SmaI	CCCGGG	1 cut(s)	1675
SmiMI	CAYNNNNRTG	1 cut(s)	1838
SmlI	CTYRAG	1 cut(s)	978
SmoI	CTYRAG	1 cut(s)	978
SpeI	ACTAGT	1 cut(s)	1948
Sse9I	AATT	4 cut(s)	353, 599, 629, 2049
SseBI	AGGCCT	1 cut(s)	451
SsiI	CCGC	9 cut(s)	155, 522, 530, 552, 1252, 1559, 1686, 1825, 1934
SspI	AATATT	2 cut(s)	799, 1474
SspMI	CTAG	7 cut(s)	122, 342, 510, 624, 918, 1592, 1949
SstI	GAGCTC	1 cut(s)	647
StuI	AGGCCT	1 cut(s)	451
StyD4I	CCNGG	7 cut(s)	25, 52, 303, 367, 1672, 1673, 1916
StyI	CCWWGG	1 cut(s)	33
TaaI	ACNGT	5 cut(s)	929, 1094, 1603, 1630, 2060
TaiI	ACGT	6 cut(s)	884, 1108, 1357, 1405, 1665, 1842
TaqI	TCGA	2 cut(s)	989, 1339
TasI	AATT	4 cut(s)	353, 599, 629, 2049
TatI	WGTACW	2 cut(s)	186, 1485
TfiI	GAWTC	9 cut(s)	142, 173, 314, 413, 1333, 1511, 1585, 1771, 1930
Tru1I	TTAA	5 cut(s)	576, 683, 843, 993, 1022
Tru9I	TTAA	5 cut(s)	576, 683, 843, 993, 1022
TscAI	CASTG	4 cut(s)	1325, 1614, 1898, 2027
TseFI	GTSAC	3 cut(s)	1711, 1763, 2018
TseI	GCWGC	1 cut(s)	263
Tsp45I	GTSAC	3 cut(s)	1711, 1763, 2018
TspGWI	ACGGA	4 cut(s)	81, 1197, 1467, 1874
TspMI	CCCGGG	1 cut(s)	1673
TspRI	CASTG	4 cut(s)	1325, 1614, 1898, 2027
XapI	RAATTY	1 cut(s)	629
XbaI	TCTAGA	2 cut(s)	121, 1591
XceI	RCATGY	2 cut(s)	1174, 1762
XmaI	CCCGGG	1 cut(s)	1673
XmiI	GTMKAC	2 cut(s)	500, 2055
XmnI	GAANNNNTTC	2 cut(s)	1814, 1950
XspI	CTAG	7 cut(s)	122, 342, 510, 624, 918, 1592, 1949
Zsp2I	ATGCAT	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.