MD03G1089800.v1.1

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000624
Physical Location & Seq
Reverse (-)
7380517 .. 7382781
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1089800.v1.1.491

Sequence Viewer

Length: 2211 bp
ATGGATCCAAGTTCGTATCAATTGCCCAATTCCAATTCCAATTTCAGCGACCAGACACTTTCCCCCAATTTCAATGAGTACCCAAGTAGCGACCCCTTTGTAGATCTTAGCTTTGTGGACCAAAACCCTAGCAACTCGGCTCTGTCGCCGAGCCTGAGCCCCGAGGGAGATGACAGTGACTACTCTGACAGTGTGCTCAAGTACATAAACCAGGTGTTACTGGAGGAGGATATGGAGACAAAGCCCTGTATGTTTCATGACCCTTTGGCTGTCCAAGCCGCTGAGAAGTCTCTCTATGAGGTTCTTGGTGGGAAGTTTCCGGCTTCTCCGGATCAACACCCGCTTAATGTAGAGAGCCCGGATGGTTGTTCTTCTGCAACTTTCAGTGATTATAGTGGCAAGACTAGTTCTAGTTCTAGTTCCAACTCTACTACTAGCCATTCGGTCGATTCATGGAGCAATAGTGTTGATGTTTTTGAACATAAGCCCTCTATTTTGCAAAACCCAATTCCTGAAAACTTTGTTTTCCAGTCCAATTCAAAGCCCAAGTCTCAGTTTTCGTCGAAAGGGGACGCCTTGGTGGGTTCTTATGTGAGTGAGCGTATGCTTTCTAATTTGTTTAGTGAGAGTGAAATGGTGTTGCAGTTTAACAGAGGGGTAGAGGAGGCTAGTAAGTTTCTCCCCAAAGGCCAATTAATTGTTGATTTGGAGAATAACAAGCCTTACACAATGGCTGATAGAAAGGCTGAAAATGTGGTGGTTAAGATGGAGAAGGATGAAAGCGAGTATCTTCCTTCTAGTTTGAGAGGAAAGAAGAGTCATGAGAGGGAGGATACAGATTTGGAGGATGGGAGGAGTACCAAGCAATCAGCGGTTTATGAGGATATGGCTGATCTGTCGGAGATTTTTGATAAGGTGCTAATCTGTAGTGAGGGAAAACCCGAGCCTATTGTGTGTGAAGGGGAAGAAGTCTGTCAGGATGAAGCAAACAAGGCTCTGCAGCAGAATGAGCAATCTGTTGGAACTAGTAACGGAAAGACTCGTGCCAAGAAAAATGGCGATAAGAAAGAAGTGGTTGATTTGAGAGCTCTCTTAATTTTATGTGCACAAGCTGTTTCTGCTGATGATCGTAGGACTGCTAATGAGCTACTAAAGCAGATTCGGCAGCACTCTTCCCCATTTGGCGATGGTTCTCAGAGGTTGGCTCATTGCTTTGCAAATGGCCTTGAAGCACGGTTAGCTGGCACTGGAACTCAGTTATATACTGCTCTATCTTCTAAAAGAACGTCAGCTGCTGATATGCTGAAGGCTTATCAGACTTATATTAAAGCCTGCCCATTCATGAAGGCCGTGATAGTCTTTGCAAACCACACAATTTCAAAATTAGCTGAGAAAGCAGAAACACTGCATATTATAGATTTTGGAATCCTTTATGGTTTTCAATGGCCTGCTCTCATCCATTGCCTCTCAAGAAGAGCTGGCGGGCCTCCAAAACTACGCATTACGGGAATAGAGCTTCCCCAAAGTGGTTTTCGACCTGAAGAAAGAGTCCAAGAGACGGGTCATCGTTTGGCAAAGTATTGTGAGCGGTATAATGTTCCTTTCGAGTACAATGGCATAGCAAAGAAATGGGAAACTATCCAATACGAGGAACTCAAAGTCAAGAGAGATGAAGTGCTTGCAGTGAATAGTCTGTTCCGGTTTAGTAACCTACTTGACGAGACAGTTGCGGTAAACAGCCCGAGGGATGCTGTTCTAAATTTAATTAGGGGCTTGAATCCTGATATTTTTATCCTCAGTGTTGGTAATGGATCTTACAATGCCCCCTTCTTCGTCACTCGCTTCAGGGAGGCTCTATTCCACTTCTCTGCATTTTTTGATATGTGTGATACCAATTTACCTCGTGAGGATCCGACGAGATTGATGTTTGAGGAAGAGTTCCTTGGGCGAGAGATTGTGAACACAGTAGCTTGTGAGGGCTCTGAGAGAGTTGTGAGGCCTGAGACATATAAGCAGTGGCAGATTCAGAACACGAGGGCTGGGTTCAAACAGCTGCCATTGGACCGTGAACTCATGAACAAAATAAGGTCCAAGGTGAAACTGGGGTACCACCGTGATTTCGTGGTTGATGAAGATGGAAACTGGATGCTGCAAGGATGGAAGGGCAGGATTATCTATAGTTCCTCCTGTTGGGTTCCGTCTAGGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

737

Amino Acids

82.62

Weight (kDa)

5.28

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 361 - 731 5.4e-121 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2106
AccB1I GGYRCC 1 cut(s) 2106
AccBSI CCGCTC 1 cut(s) 1588
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 6 cut(s) 279, 341, 872, 1482, 1588, 1730
AclWI GGATC 5 cut(s) 12, 339, 1819, 1904, 1917
AcsI RAATTY 1 cut(s) 1759
AcuI CTGAAG 3 cut(s) 1325, 1560, 1828
AcyI GRCGYC 1 cut(s) 573
AfaI GTAC 5 cut(s) 80, 203, 859, 1610, 2108
AfiI CCNNNNNNNGG 4 cut(s) 1526, 1558, 1648, 2190
AgsI TTSAA 8 cut(s) 73, 479, 540, 1229, 1380, 1442, 1777, 2047
AhlI ACTAGT 2 cut(s) 404, 1025
AjnI CCWGG 1 cut(s) 210
AjuI GAANNNNNNNTTGG 6 cut(s) 26, 58, 1515, 1547, 1926, 1958
Alw21I GWGCWC 3 cut(s) 198, 1090, 1108
Alw26I GTCTC 6 cut(s) 230, 294, 555, 1550, 1715, 1997
Alw44I GTGCAC 1 cut(s) 1104
AlwI GGATC 5 cut(s) 12, 339, 1819, 1904, 1917
AlwNI CAGNNNCTG 1 cut(s) 1295
Ama87I CYCGRG 3 cut(s) 161, 941, 1741
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 6 cut(s) 688, 1222, 1347, 1445, 1484, 1997
ApaLI GTGCAC 1 cut(s) 1104
ApeKI GCWGC 5 cut(s) 1000, 1165, 1292, 2053, 2149
ApoI RAATTY 1 cut(s) 1759
ArsI GACNNNNNNTTYG 2 cut(s) 533, 565
AseI ATTAAT 1 cut(s) 695
Asp718I GGTACC 1 cut(s) 2106
AspS9I GGNCC 5 cut(s) 118, 1484, 2062, 2088, 2205
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 1 cut(s) 2107
AvaI CYCGRG 3 cut(s) 161, 941, 1741
AvaII GGWCC 4 cut(s) 118, 2062, 2088, 2205
BaeGI GKGCMC 1 cut(s) 1108
BaeI ACNNNNGTAYC 4 cut(s) 2090, 2098, 2123, 2131
BamHI GGATCC 2 cut(s) 4, 1909
BanI GGYRCC 1 cut(s) 2106
BanII GRGCYC 4 cut(s) 161, 359, 1090, 1982
BauI CACGAG 3 cut(s) 1041, 1902, 2032
Bbv12I GWGCWC 3 cut(s) 198, 1090, 1108
BbvI GCAGC 5 cut(s) 1012, 1177, 1279, 2040, 2136
BccI CCATC 6 cut(s) 356, 760, 842, 1181, 2129, 2151
BceAI ACGGC 1 cut(s) 1334
BcgI CGANNNNNNTGC 2 cut(s) 1709, 1743
BciT130I CCWGG 1 cut(s) 212
BciVI GTATCC 1 cut(s) 826
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 6 cut(s) 230, 294, 555, 1550, 1715, 1997
BcuI ACTAGT 2 cut(s) 404, 1025
BfaI CTAG 9 cut(s) 129, 405, 411, 417, 435, 669, 798, 1026, 2202
BfmI CTRYAG 3 cut(s) 925, 998, 2176
BfuI GTATCC 1 cut(s) 826
BglII AGATCT 1 cut(s) 103
BisI GCNGC 6 cut(s) 279, 1001, 1166, 1293, 2054, 2150
BlsI GCNGC 6 cut(s) 280, 1002, 1167, 1294, 2055, 2151
Bme1390I CCNGG 2 cut(s) 212, 359
Bme18I GGWCC 4 cut(s) 118, 2062, 2088, 2205
BmeT110I CYCGRG 3 cut(s) 161, 941, 1741
BmgT120I GGNCC 5 cut(s) 118, 1484, 2062, 2088, 2205
BmiI GGNNCC 4 cut(s) 6, 1911, 2108, 2196
BmrFI CCNGG 2 cut(s) 212, 359
BmrI ACTGGG 1 cut(s) 2111
BmsI GCATC 2 cut(s) 1738, 2136
BmuI ACTGGG 1 cut(s) 2111
BplI GAGNNNNNCTC 2 cut(s) 1189, 1221
BpmI CTGGAG 1 cut(s) 242
Bpu10I CCTNAGC 1 cut(s) 155
BpuEI CTTGAG 2 cut(s) 182, 1453
BpuMI CCSGG 1 cut(s) 359
BsaHI GRCGYC 1 cut(s) 573
BsaJI CCNNGG 5 cut(s) 162, 576, 1742, 1942, 2091
BsaWI WCCGGW 2 cut(s) 328, 1698
BsaXI ACNNNNNCTCC 2 cut(s) 448, 478
Bsc4I CCNNNNNNNGG 4 cut(s) 1526, 1558, 1648, 2190
Bse1I ACTGG 5 cut(s) 225, 529, 1252, 2106, 2147
Bse3DI GCAATG 2 cut(s) 1207, 1459
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 1 cut(s) 212
BseDI CCNNGG 5 cut(s) 162, 576, 1742, 1942, 2091
BseGI GGATG 8 cut(s) 367, 781, 853, 985, 1455, 1753, 2151, 2162
BseLI CCNNNNNNNGG 4 cut(s) 1526, 1558, 1648, 2190
BseMI GCAATG 2 cut(s) 1207, 1459
BseMII CTCAG 9 cut(s) 146, 273, 566, 1208, 1268, 1380, 1810, 1974, 1992
BseNI ACTGG 5 cut(s) 225, 529, 1252, 2106, 2147
BseRI GAGGAG 3 cut(s) 239, 677, 868
BseSI GKGCMC 1 cut(s) 1108
BseXI GCAGC 5 cut(s) 1012, 1177, 1279, 2040, 2136
BseYI CCCAGC 1 cut(s) 2039
Bsh1285I CGRYCG 1 cut(s) 447
BshFI GGCC 6 cut(s) 690, 1224, 1349, 1447, 1486, 1999
BshNI GGYRCC 1 cut(s) 2106
BsiEI CGRYCG 1 cut(s) 447
BsiHKAI GWGCWC 3 cut(s) 198, 1090, 1108
BsiHKCI CYCGRG 3 cut(s) 161, 941, 1741
BsiSI CCGG 4 cut(s) 320, 329, 359, 1699
BslFI GGGAC 1 cut(s) 584
BslI CCNNNNNNNGG 4 cut(s) 1526, 1558, 1648, 2190
BsmAI GTCTC 6 cut(s) 230, 294, 555, 1550, 1715, 1997
BsmBI CGTCTC 1 cut(s) 1550
BsmFI GGGAC 1 cut(s) 584
BsnI GGCC 6 cut(s) 690, 1224, 1349, 1447, 1486, 1999
BsoBI CYCGRG 3 cut(s) 161, 941, 1741
Bsp1286I GDGCHC 6 cut(s) 161, 198, 359, 1090, 1108, 1982
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
BspACI CCGC 6 cut(s) 279, 341, 872, 1482, 1588, 1730
BspANI GGCC 6 cut(s) 690, 1224, 1349, 1447, 1486, 1999
BspCNI CTCAG 9 cut(s) 147, 274, 565, 1207, 1267, 1381, 1809, 1975, 1993
BspEI TCCGGA 1 cut(s) 328
BspHI TCATGA 4 cut(s) 256, 820, 1341, 2073
BspLI GGNNCC 4 cut(s) 6, 1911, 2108, 2196
BspMAI CTGCAG 1 cut(s) 1002
BspPI GGATC 5 cut(s) 12, 339, 1819, 1904, 1917
BspQI GCTCTTC 1 cut(s) 1468
BspT107I GGYRCC 1 cut(s) 2106
BsrBI CCGCTC 1 cut(s) 1588
BsrDI GCAATG 2 cut(s) 1207, 1459
BsrI ACTGG 5 cut(s) 225, 529, 1252, 2106, 2147
BssECI CCNNGG 5 cut(s) 162, 576, 1742, 1942, 2091
BssMI GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
BssNI GRCGYC 1 cut(s) 573
BssSI CACGAG 3 cut(s) 1041, 1902, 2032
BssT1I CCWWGG 3 cut(s) 576, 1942, 2091
Bst2BI CACGAG 3 cut(s) 1041, 1902, 2032
Bst2UI CCWGG 1 cut(s) 212
Bst4CI ACNGT 7 cut(s) 176, 191, 1236, 1726, 1966, 2066, 2114
Bst6I CTCTTC 4 cut(s) 809, 1177, 1468, 1929
BstACI GRCGYC 1 cut(s) 573
BstC8I GCNNGC 6 cut(s) 1243, 1333, 1449, 1480, 1484, 1680
BstF5I GGATG 8 cut(s) 367, 781, 853, 985, 1455, 1753, 2151, 2162
BstKTI GATC 7 cut(s) 7, 106, 334, 895, 1129, 1814, 1912
BstMAI GTCTC 6 cut(s) 230, 294, 555, 1550, 1715, 1997
BstMBI GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
BstMCI CGRYCG 1 cut(s) 447
BstMWI GCNNNNNNNGC 8 cut(s) 275, 992, 1009, 1118, 1153, 1162, 1238, 1394
BstNI CCWGG 1 cut(s) 212
BstSCI CCNGG 2 cut(s) 210, 357
BstSFI CTRYAG 3 cut(s) 925, 998, 2176
BstSLI GKGCMC 1 cut(s) 1108
BstV1I GCAGC 5 cut(s) 1012, 1177, 1279, 2040, 2136
BstX2I RGATCY 4 cut(s) 4, 103, 1811, 1909
BstYI RGATCY 4 cut(s) 4, 103, 1811, 1909
BsuI GTATCC 1 cut(s) 826
BsuRI GGCC 6 cut(s) 690, 1224, 1349, 1447, 1486, 1999
BtgZI GCGATG 1 cut(s) 1200
BtsCI GGATG 8 cut(s) 367, 781, 853, 985, 1455, 1753, 2151, 2162
BtsI GCAGTG 3 cut(s) 1403, 1689, 2021
BtsIMutI CAGTG 8 cut(s) 181, 196, 391, 1245, 1403, 1689, 1804, 2021
Cac8I GCNNGC 6 cut(s) 1243, 1333, 1449, 1480, 1484, 1680
CaiI CAGNNNCTG 1 cut(s) 1295
CciI TCATGA 4 cut(s) 256, 820, 1341, 2073
Cfr13I GGNCC 5 cut(s) 118, 1484, 2062, 2088, 2205
CseI GACGC 1 cut(s) 581
CsiI ACCWGGT 1 cut(s) 210
Csp6I GTAC 5 cut(s) 79, 202, 858, 1609, 2107
CviAII CATG 5 cut(s) 257, 453, 821, 1342, 2074
CviQI GTAC 5 cut(s) 79, 202, 858, 1609, 2107
DpnI GATC 7 cut(s) 6, 105, 333, 894, 1128, 1813, 1911
DpnII GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
Eam1104I CTCTTC 4 cut(s) 809, 1177, 1468, 1929
EarI CTCTTC 4 cut(s) 809, 1177, 1468, 1929
Ecl136II GAGCTC 1 cut(s) 1088
Eco130I CCWWGG 3 cut(s) 576, 1942, 2091
Eco147I AGGCCT 1 cut(s) 1999
Eco24I GRGCYC 4 cut(s) 161, 359, 1090, 1982
Eco47I GGWCC 4 cut(s) 118, 2062, 2088, 2205
Eco53kI GAGCTC 1 cut(s) 1088
Eco57I CTGAAG 3 cut(s) 1325, 1560, 1828
Eco88I CYCGRG 3 cut(s) 161, 941, 1741
EcoICRI GAGCTC 1 cut(s) 1088
EcoO109I RGGNCCY 1 cut(s) 2205
EcoRII CCWGG 1 cut(s) 210
EcoT14I CCWWGG 3 cut(s) 576, 1942, 2091
EcoT38I GRGCYC 4 cut(s) 161, 359, 1090, 1982
ErhI CCWWGG 3 cut(s) 576, 1942, 2091
Esp3I CGTCTC 1 cut(s) 1550
FaeI CATG 5 cut(s) 260, 456, 824, 1345, 2077
FalI AAGNNNNNCTT 2 cut(s) 1926, 1958
FaqI GGGAC 1 cut(s) 584
FatI CATG 5 cut(s) 256, 452, 820, 1341, 2073
FauI CCCGC 2 cut(s) 348, 1475
Fnu4HI GCNGC 6 cut(s) 279, 1001, 1166, 1293, 2054, 2150
FokI GGATG 8 cut(s) 374, 788, 860, 992, 1442, 1760, 2158, 2169
FriOI GRGCYC 4 cut(s) 161, 359, 1090, 1982
Fsp4HI GCNGC 6 cut(s) 279, 1001, 1166, 1293, 2054, 2150
FspBI CTAG 9 cut(s) 129, 405, 411, 417, 435, 669, 798, 1026, 2202
GluI GCNGC 6 cut(s) 279, 1001, 1166, 1293, 2054, 2150
GsaI CCCAGC 1 cut(s) 2043
GsuI CTGGAG 1 cut(s) 242
HaeIII GGCC 6 cut(s) 690, 1224, 1349, 1447, 1486, 1999
HapII CCGG 4 cut(s) 320, 329, 359, 1699
HgaI GACGC 1 cut(s) 581
Hin1I GRCGYC 1 cut(s) 573
Hin1II CATG 5 cut(s) 260, 456, 824, 1345, 2077
HinfI GANTC 8 cut(s) 449, 817, 1039, 1159, 1425, 1548, 1777, 2023
HpaII CCGG 4 cut(s) 320, 329, 359, 1699
HphI GGTGA 1 cut(s) 2107
Hpy166II GTNNAC 5 cut(s) 118, 1106, 1735, 1960, 2069
Hpy188I TCNGA 7 cut(s) 187, 901, 1197, 1317, 1914, 1984, 2028
Hpy8I GTNNAC 5 cut(s) 118, 1106, 1735, 1960, 2069
Hpy99I CGWCG 2 cut(s) 565, 1918
HpyAV CCTTC 7 cut(s) 766, 804, 953, 1300, 1339, 1837, 2155
HpyCH4III ACNGT 7 cut(s) 176, 191, 1236, 1726, 1966, 2066, 2114
HpyCH4IV ACGT 1 cut(s) 1286
HpyF10VI GCNNNNNNNGC 8 cut(s) 275, 992, 1009, 1118, 1153, 1162, 1238, 1394
HpySE526I ACGT 1 cut(s) 1286
Hsp92I GRCGYC 1 cut(s) 573
Hsp92II CATG 5 cut(s) 260, 456, 824, 1345, 2077
Kpn2I TCCGGA 1 cut(s) 328
KpnI GGTACC 1 cut(s) 2110
Kzo9I GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
LguI GCTCTTC 1 cut(s) 1468
LmnI GCTCC 1 cut(s) 456
Lsp1109I GCAGC 5 cut(s) 1012, 1177, 1279, 2040, 2136
LweI GCATC 2 cut(s) 1738, 2136
MabI ACCWGGT 1 cut(s) 210
MaeI CTAG 9 cut(s) 129, 405, 411, 417, 435, 669, 798, 1026, 2202
MaeII ACGT 1 cut(s) 1286
MaeIII GTNAC 5 cut(s) 176, 216, 1028, 1706, 1834
MalI GATC 7 cut(s) 6, 105, 333, 894, 1128, 1813, 1911
MbiI CCGCTC 1 cut(s) 1588
MboI GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
MfeI CAATTG 1 cut(s) 20
MflI RGATCY 4 cut(s) 4, 103, 1811, 1909
MhlI GDGCHC 6 cut(s) 161, 198, 359, 1090, 1108, 1982
MlyI GAGTC 3 cut(s) 826, 1033, 1557
MmeI TCCRAC 4 cut(s) 447, 879, 1000, 1937
MroI TCCGGA 1 cut(s) 328
MseI TTAA 7 cut(s) 345, 648, 695, 762, 1094, 1326, 1763
MspA1I CMGCKG 4 cut(s) 281, 872, 1292, 2053
MspI CCGG 4 cut(s) 320, 329, 359, 1699
MspR9I CCNGG 2 cut(s) 212, 359
MunI CAATTG 1 cut(s) 20
MvaI CCWGG 1 cut(s) 212
MwoI GCNNNNNNNGC 8 cut(s) 275, 992, 1009, 1118, 1153, 1162, 1238, 1394
NciI CCSGG 1 cut(s) 359
NdeII GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
NlaIII CATG 5 cut(s) 260, 456, 824, 1345, 2077
NlaIV GGNNCC 4 cut(s) 6, 1911, 2108, 2196
NmeAIII GCCGAG 2 cut(s) 116, 174
NmuCI GTSAC 2 cut(s) 176, 1834
PagI TCATGA 4 cut(s) 256, 820, 1341, 2073
PceI AGGCCT 1 cut(s) 1999
PciSI GCTCTTC 1 cut(s) 1468
PfeI GAWTC 5 cut(s) 449, 1159, 1425, 1777, 2023
PkrI GCNGC 6 cut(s) 280, 1002, 1167, 1294, 2055, 2151
PleI GAGTC 3 cut(s) 825, 1033, 1556
PpsI GAGTC 3 cut(s) 825, 1033, 1556
PpuMI RGGWCCY 1 cut(s) 2205
PshBI ATTAAT 1 cut(s) 695
Psp124BI GAGCTC 1 cut(s) 1090
Psp5II RGGWCCY 1 cut(s) 2205
Psp6I CCWGG 1 cut(s) 210
PspFI CCCAGC 1 cut(s) 2039
PspGI CCWGG 1 cut(s) 210
PspN4I GGNNCC 4 cut(s) 6, 1911, 2108, 2196
PspPI GGNCC 5 cut(s) 118, 1484, 2062, 2088, 2205
PspPPI RGGWCCY 1 cut(s) 2205
PstI CTGCAG 1 cut(s) 1002
PstNI CAGNNNCTG 1 cut(s) 1295
PsuI RGATCY 4 cut(s) 4, 103, 1811, 1909
PvuII CAGCTG 2 cut(s) 1292, 2053
RsaI GTAC 5 cut(s) 80, 203, 859, 1610, 2108
RsaNI GTAC 5 cut(s) 79, 202, 858, 1609, 2107
SacI GAGCTC 1 cut(s) 1090
SapI GCTCTTC 1 cut(s) 1468
SaqAI TTAA 7 cut(s) 345, 648, 695, 762, 1094, 1326, 1763
SatI GCNGC 6 cut(s) 279, 1001, 1166, 1293, 2054, 2150
Sau3AI GATC 7 cut(s) 4, 103, 331, 892, 1126, 1811, 1909
Sau96I GGNCC 5 cut(s) 118, 1484, 2062, 2088, 2205
SchI GAGTC 3 cut(s) 826, 1033, 1557
ScrFI CCNGG 2 cut(s) 212, 359
SduI GDGCHC 6 cut(s) 161, 198, 359, 1090, 1108, 1982
SexAI ACCWGGT 1 cut(s) 210
SfaNI GCATC 2 cut(s) 1738, 2136
SfcI CTRYAG 3 cut(s) 925, 998, 2176
SinI GGWCC 4 cut(s) 118, 2062, 2088, 2205
SmlI CTYRAG 2 cut(s) 197, 1468
SmoI CTYRAG 2 cut(s) 197, 1468
SpeI ACTAGT 2 cut(s) 404, 1025
SseBI AGGCCT 1 cut(s) 1999
SsiI CCGC 6 cut(s) 279, 341, 872, 1482, 1588, 1730
SspMI CTAG 9 cut(s) 129, 405, 411, 417, 435, 669, 798, 1026, 2202
SstI GAGCTC 1 cut(s) 1090
StuI AGGCCT 1 cut(s) 1999
StyD4I CCNGG 2 cut(s) 210, 357
StyI CCWWGG 3 cut(s) 576, 1942, 2091
TaaI ACNGT 7 cut(s) 176, 191, 1236, 1726, 1966, 2066, 2114
TaiI ACGT 1 cut(s) 1289
TaqI TCGA 4 cut(s) 447, 563, 1534, 1605
TaqII GACCGA 1 cut(s) 433
TatI WGTACW 2 cut(s) 201, 1608
TauI GCSGC 1 cut(s) 281
TfiI GAWTC 5 cut(s) 449, 1159, 1425, 1777, 2023
Tru1I TTAA 7 cut(s) 345, 648, 695, 762, 1094, 1326, 1763
Tru9I TTAA 7 cut(s) 345, 648, 695, 762, 1094, 1326, 1763
TscAI CASTG 8 cut(s) 181, 196, 391, 1252, 1410, 1689, 1804, 2021
TseFI GTSAC 2 cut(s) 176, 1834
TseI GCWGC 5 cut(s) 1000, 1165, 1292, 2053, 2149
Tsp45I GTSAC 2 cut(s) 176, 1834
TspDTI ATGAA 9 cut(s) 245, 441, 792, 996, 1330, 1358, 1686, 2090, 2145
TspGWI ACGGA 2 cut(s) 1047, 2187
TspRI CASTG 8 cut(s) 181, 196, 391, 1252, 1410, 1689, 1804, 2021
VneI GTGCAC 1 cut(s) 1104
VpaK11BI GGWCC 4 cut(s) 118, 2062, 2088, 2205
VspI ATTAAT 1 cut(s) 695
XapI RAATTY 1 cut(s) 1759
XcmI CCANNNNNNNNNTGG 1 cut(s) 2098
XspI CTAG 9 cut(s) 129, 405, 411, 417, 435, 669, 798, 1026, 2202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.