Rw5G040360

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000624
Physical Location & Seq
Forward (+)
71215205 .. 71232555
17351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G040360.1

Sequence Viewer

Length: 2004 bp
ATGGATCCACGTTTCTCTGAATTTCCCAATTTCAATGATCAAACCCTTTTGCCTGATATGTTGAGTGAGTACCCAAGTAGTGATCCTTCTCAAGATCTTAGCTTTTTGGACCCAAATCCCAGTAACTCTTCATCAAGCTTTAGCCCTGAGGGAGATGATGGTGAGTTTTCTGACAGTGTCCTCAAGTACATAAACCAGGTGCTTATTAAGGAGGACATGGAATCAAAACCCTGTATGTTCCATGACCCTTTGGCTCTTCAAGCCACTGAGGAGTCTCTTCATGAGATTATTGGAGGAGGGAAGAACCCAACTTCCCAAGACCTAAACCGTCTTTGTGTTGATCAAAATGTGTATGGAAATGGAAATGGGAATGGGAATGGGATGCTGGGTTCTTATAGGAGTGAGCTAATTGTTCCTGATATGCTTAGTAAGAGTGAATTGTTATTGCAATTTAACCTAGGGGCAGAGGAGGGTAGTAAGTTTCTTCCTAGAGGTCAATTGATTAGTGCGGAGGGCAACAAGCCCTATGCTGTGGCGGATAGAAAGGCTGGAGATGTGGTAGTTACGACCCAGAAGAATGGGAGTGAGCGTTTTCGTGTTGGTTCTAGAGGAAAGAAAAATCATCAAAGGGAAGATATAGATTTGGAGGATGGGAGGAGTAACAAGCAATCGGCGGTTTATATGGATGGTGAGGAGGGTGAGCTGTCTGATATTTTTGACAAGGTGTTGCTCTCCAAGCCTATCAAGAGTAAAGACGATCAAGTCAGTCAGAATGGAGCAAACAATAGCCTGCAGCAGGATGGGCTATCTGTTGGAATTGGTAATGGGAAGGTTTGTGGCAAGAATCAAGGCAACAAGAAGGAAGTGATAGATTTGAGGGCTCTTCTGATTTCATGTGCAGAAGCTGTATCTGTTGATGACCGCGAGACTGCTAGTGAGCTACTAAAGCAGATTATTCAGCACTCTTCCCCATTTGGTGATTGTACTCAAAGGTTGGCTCATTGCTTTGCAAATGCTCTTGAAGCGCGGTTGGCTGGCACAGGACCTCAAATATATACTGCTTTAACTACTAAACGAATGTCAGCTGCTGATTCGCTGAAGTTTTACCAAGCTTATATTGCAGTCTGCCCGTTCATGAAGTTGTTGATGATCTTTGCAAACGATATGATTTTGAAAGCTGCTGAGAAAGCAGAAACACTACATATAATAGATTTTGGTATCCGTTATGGTTTTCAATGGCCAGCTCTCATTCATTGCCTCTCAAGAAGACCTGGTGGACCTCCGAAATTACGCATTACAGGGTTAGAGTTTCCCTCAAGTGGTTTTCGACCAGAAGAAGGAATCCAAGAGACAGGGCATCGCTTGGCAAAGTATTGTAGGCGATTTAATGTTCATTTTGAGTACCATGGCATAGCCAAAAAATGGGAAACTCTCCAATTTGATGACCTTAGAGTTCAAAGAAATGAGGTGCTTGCTGTTAATTGTCTCAACCGATTTAAGTACCTCCTTGATGAGACAGTTGTGGTAAACAGTCCAAGGGATACTGTTCTAAATTTAATTAGGAATTTGAATCCTGATGTCTTTGTCCAGAGTGTTGTTAATGGATCCCATCATGCACCCTTCTTTGTTCCACGCTTCCGAGAGGCACTATTCCACTTCTCTGCATTGTTTGATATGTTGGATACCAATTTGCCTCGTGAAGATCAGATGAGATTGGGGTTTGAGAAAGAGTTTATTGGACGTGAAGTTGTGAATATAGTAGCTTGTGAGGGCTTTCAAAGAATTGTTAGGCCAGAAACATACAAGCAGTGGCAGATTCGAAACATGAGGGCTGGGTTCAGACAGCTGCCATTGGACCGTGAAGTCATGAACAAAATAAAGGATAAGGTAAAAATGGGGTACCACCCTTATTTTGTTGTTGATGAAGATGGCCACTGGATGCTGCAGGGATGGAAGGGCAGAATTCTGTATGCTTCTGCCTGTTGGGCACCTTCTAGGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

667

Amino Acids

75.13

Weight (kDa)

5.99

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 292 - 662 3.9e-120 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 761, 1862
Acc65I GGTACC 1 cut(s) 1899
AccB1I GGYRCC 2 cut(s) 1899, 1987
AccB7I CCANNNNNTGG 1 cut(s) 1422
AccII CGCG 2 cut(s) 924, 1027
AciI CCGC 5 cut(s) 509, 536, 674, 922, 1027
AclWI GGATC 4 cut(s) 12, 77, 1599, 1612
AcoI YGGCCR 2 cut(s) 1238, 1930
AcsI RAATTY 4 cut(s) 20, 1552, 1564, 1962
AcuI CTGAAG 1 cut(s) 1118
AfaI GTAC 6 cut(s) 71, 188, 985, 1403, 1502, 1901
AfiI CCNNNNNNNGG 4 cut(s) 796, 1319, 1337, 1422
AgsI TTSAA 8 cut(s) 34, 260, 1022, 1174, 1235, 1457, 1570, 1778
AjiI CACGTC 1 cut(s) 1742
AjnI CCWGG 2 cut(s) 195, 1270
AloI GAACNNNNNNTCC 4 cut(s) 296, 328, 373, 405
Alw26I GTCTC 5 cut(s) 279, 920, 1343, 1490, 1508
AlwI GGATC 4 cut(s) 12, 77, 1599, 1612
AlwNI CAGNNNCTG 2 cut(s) 905, 1088
AoxI GGCC 3 cut(s) 1238, 1790, 1930
ApeKI GCWGC 5 cut(s) 793, 1085, 1178, 1846, 1942
ApoI RAATTY 4 cut(s) 20, 1552, 1564, 1962
Asp718I GGTACC 1 cut(s) 1899
AspA2I CCTAGG 1 cut(s) 457
AspLEI GCGC 1 cut(s) 1027
AspS9I GGNCC 4 cut(s) 109, 1043, 1277, 1855
AsuHPI GGTGA 4 cut(s) 173, 701, 710, 989
AsuII TTCGAA 1 cut(s) 1819
AvaII GGWCC 4 cut(s) 109, 1043, 1277, 1855
AvrII CCTAGG 1 cut(s) 457
AxyI CCTNAGG 1 cut(s) 147
BaeGI GKGCMC 1 cut(s) 1990
BalI TGGCCA 2 cut(s) 1240, 1932
BamHI GGATCC 2 cut(s) 4, 1604
BanI GGYRCC 2 cut(s) 1899, 1987
BanII GRGCYC 1 cut(s) 883
BarI GAAGNNNNNNTAC 2 cut(s) 70, 102
BauI CACGAG 1 cut(s) 1695
BbsI GAAGAC 1 cut(s) 1273
BbvI GCAGC 5 cut(s) 805, 1072, 1165, 1833, 1929
BccI CCATC 7 cut(s) 152, 644, 680, 794, 1617, 1922, 1944
BciT130I CCWGG 2 cut(s) 197, 1272
BciVI GTATCC 3 cut(s) 1229, 1534, 1675
BclI TGATCA 2 cut(s) 37, 340
BcoDI GTCTC 5 cut(s) 279, 920, 1343, 1490, 1508
BfaI CTAG 5 cut(s) 458, 489, 606, 933, 1995
BfmI CTRYAG 2 cut(s) 791, 1943
BfuI GTATCC 3 cut(s) 1229, 1534, 1675
BglI GCCNNNNNGGC 1 cut(s) 1985
BglII AGATCT 1 cut(s) 94
BisI GCNGC 5 cut(s) 794, 1086, 1179, 1847, 1943
BlnI CCTAGG 1 cut(s) 457
BlsI GCNGC 5 cut(s) 795, 1087, 1180, 1848, 1944
Bme1390I CCNGG 2 cut(s) 197, 1272
Bme18I GGWCC 4 cut(s) 109, 1043, 1277, 1855
BmgBI CACGTC 1 cut(s) 1742
BmgT120I GGNCC 4 cut(s) 109, 1043, 1277, 1855
BmiI GGNNCC 5 cut(s) 6, 111, 1606, 1901, 1989
BmrFI CCNGG 2 cut(s) 197, 1272
BmrI ACTGGG 1 cut(s) 114
BmsI GCATC 3 cut(s) 372, 1366, 1929
BmuI ACTGGG 1 cut(s) 114
BpiI GAAGAC 1 cut(s) 1273
BplI GAGNNNNNCTC 2 cut(s) 1298, 1330
BpmI CTGGAG 1 cut(s) 570
Bpu14I TTCGAA 1 cut(s) 1819
BpuEI CTTGAG 4 cut(s) 75, 167, 1246, 1300
BsaJI CCNNGG 3 cut(s) 457, 1405, 1535
BsaXI ACNNNNNCTCC 4 cut(s) 543, 573, 574, 604
Bsc4I CCNNNNNNNGG 4 cut(s) 796, 1319, 1337, 1422
Bse1I ACTGG 2 cut(s) 120, 1940
Bse21I CCTNAGG 1 cut(s) 147
Bse3DI GCAATG 2 cut(s) 1000, 1252
BseBI CCWGG 2 cut(s) 197, 1272
BseDI CCNNGG 3 cut(s) 457, 1405, 1535
BseGI GGATG 6 cut(s) 387, 655, 691, 805, 1944, 1955
BseLI CCNNNNNNNGG 4 cut(s) 796, 1319, 1337, 1422
BseMI GCAATG 2 cut(s) 1000, 1252
BseMII CTCAG 3 cut(s) 138, 258, 1173
BseNI ACTGG 2 cut(s) 120, 1940
BseRI GAGGAG 5 cut(s) 284, 309, 482, 670, 707
BseSI GKGCMC 1 cut(s) 1990
BseXI GCAGC 5 cut(s) 805, 1072, 1165, 1833, 1929
BseYI CCCAGC 2 cut(s) 385, 1832
BsgI GTGCAG 1 cut(s) 918
Bsh1236I CGCG 2 cut(s) 924, 1027
BshFI GGCC 3 cut(s) 1240, 1792, 1932
BshNI GGYRCC 2 cut(s) 1899, 1987
BslI CCNNNNNNNGG 4 cut(s) 796, 1319, 1337, 1422
BsmAI GTCTC 5 cut(s) 279, 920, 1343, 1490, 1508
BsnI GGCC 3 cut(s) 1240, 1792, 1932
Bsp119I TTCGAA 1 cut(s) 1819
Bsp1286I GDGCHC 2 cut(s) 883, 1990
Bsp143I GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
Bsp19I CCATGG 1 cut(s) 1405
BspACI CCGC 5 cut(s) 509, 536, 674, 922, 1027
BspANI GGCC 3 cut(s) 1240, 1792, 1932
BspCNI CTCAG 3 cut(s) 139, 259, 1174
BspFNI CGCG 2 cut(s) 924, 1027
BspHI TCATGA 3 cut(s) 280, 1134, 1866
BspLI GGNNCC 5 cut(s) 6, 111, 1606, 1901, 1989
BspMAI CTGCAG 2 cut(s) 795, 1947
BspPI GGATC 4 cut(s) 12, 77, 1599, 1612
BspQI GCTCTTC 2 cut(s) 261, 888
BspT104I TTCGAA 1 cut(s) 1819
BspT107I GGYRCC 2 cut(s) 1899, 1987
BsrDI GCAATG 2 cut(s) 1000, 1252
BsrI ACTGG 2 cut(s) 120, 1940
BssECI CCNNGG 3 cut(s) 457, 1405, 1535
BssMI GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
BssSI CACGAG 1 cut(s) 1695
BssT1I CCWWGG 3 cut(s) 457, 1405, 1535
Bst2BI CACGAG 1 cut(s) 1695
Bst2UI CCWGG 2 cut(s) 197, 1272
Bst4CI ACNGT 6 cut(s) 176, 329, 1519, 1532, 1546, 1859
Bst6I CTCTTC 5 cut(s) 133, 261, 282, 888, 970
BstBI TTCGAA 1 cut(s) 1819
BstC8I GCNNGC 4 cut(s) 791, 1036, 1242, 1473
BstDEI CTNAG 6 cut(s) 98, 147, 267, 425, 1182, 1448
BstDSI CCRYGG 1 cut(s) 1405
BstENI CCTNNNNNAGG 1 cut(s) 794
BstF5I GGATG 6 cut(s) 387, 655, 691, 805, 1944, 1955
BstFNI CGCG 2 cut(s) 924, 1027
BstHHI GCGC 1 cut(s) 1027
BstKTI GATC 9 cut(s) 7, 40, 85, 97, 343, 760, 1152, 1607, 1705
BstMAI GTCTC 5 cut(s) 279, 920, 1343, 1490, 1508
BstMBI GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
BstMWI GCNNNNNNNGC 9 cut(s) 260, 736, 802, 946, 1022, 1031, 1118, 1187, 1985
BstNI CCWGG 2 cut(s) 197, 1272
BstSCI CCNGG 2 cut(s) 195, 1270
BstSFI CTRYAG 2 cut(s) 791, 1943
BstSLI GKGCMC 1 cut(s) 1990
BstUI CGCG 2 cut(s) 924, 1027
BstV1I GCAGC 5 cut(s) 805, 1072, 1165, 1833, 1929
BstV2I GAAGAC 1 cut(s) 1273
BstX2I RGATCY 3 cut(s) 4, 94, 1604
BstXI CCANNNNNNTGG 1 cut(s) 578
BstYI RGATCY 3 cut(s) 4, 94, 1604
Bsu36I CCTNAGG 1 cut(s) 147
BsuI GTATCC 3 cut(s) 1229, 1534, 1675
BsuRI GGCC 3 cut(s) 1240, 1792, 1932
BtgI CCRYGG 1 cut(s) 1405
BtgZI GCGATG 1 cut(s) 1343
BtrI CACGTC 1 cut(s) 1742
BtsCI GGATG 6 cut(s) 387, 655, 691, 805, 1944, 1955
BtsI GCAGTG 1 cut(s) 1814
BtsIMutI CAGTG 4 cut(s) 181, 264, 1814, 1933
Cac8I GCNNGC 4 cut(s) 791, 1036, 1242, 1473
CaiI CAGNNNCTG 2 cut(s) 905, 1088
CciI TCATGA 3 cut(s) 280, 1134, 1866
CfoI GCGC 1 cut(s) 1027
Cfr13I GGNCC 4 cut(s) 109, 1043, 1277, 1855
CsiI ACCWGGT 2 cut(s) 195, 1270
Csp6I GTAC 6 cut(s) 70, 187, 984, 1402, 1501, 1900
CviAII CATG 9 cut(s) 217, 242, 281, 894, 1135, 1406, 1613, 1825, 1867
CviQI GTAC 6 cut(s) 70, 187, 984, 1402, 1501, 1900
DdeI CTNAG 6 cut(s) 98, 147, 267, 425, 1182, 1448
DpnI GATC 9 cut(s) 6, 39, 84, 96, 342, 759, 1151, 1606, 1704
DpnII GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
DrdI GACNNNNNNGTC 2 cut(s) 761, 1862
DseDI GACNNNNNNGTC 2 cut(s) 761, 1862
EaeI YGGCCR 2 cut(s) 1238, 1930
Eam1104I CTCTTC 5 cut(s) 133, 261, 282, 888, 970
EarI CTCTTC 5 cut(s) 133, 261, 282, 888, 970
EciI GGCGGA 1 cut(s) 551
Eco130I CCWWGG 3 cut(s) 457, 1405, 1535
Eco24I GRGCYC 1 cut(s) 883
Eco47I GGWCC 4 cut(s) 109, 1043, 1277, 1855
Eco57I CTGAAG 1 cut(s) 1118
Eco81I CCTNAGG 1 cut(s) 147
EcoNI CCTNNNNNAGG 1 cut(s) 794
EcoO109I RGGNCCY 1 cut(s) 1043
EcoRI GAATTC 1 cut(s) 1962
EcoRII CCWGG 2 cut(s) 195, 1270
EcoT14I CCWWGG 3 cut(s) 457, 1405, 1535
EcoT38I GRGCYC 1 cut(s) 883
ErhI CCWWGG 3 cut(s) 457, 1405, 1535
FaeI CATG 9 cut(s) 220, 245, 284, 897, 1138, 1409, 1616, 1828, 1870
FatI CATG 9 cut(s) 216, 241, 280, 893, 1134, 1405, 1612, 1824, 1866
FbaI TGATCA 2 cut(s) 37, 340
Fnu4HI GCNGC 5 cut(s) 794, 1086, 1179, 1847, 1943
FokI GGATG 6 cut(s) 394, 662, 698, 812, 1951, 1962
FriOI GRGCYC 1 cut(s) 883
Fsp4HI GCNGC 5 cut(s) 794, 1086, 1179, 1847, 1943
FspBI CTAG 5 cut(s) 458, 489, 606, 933, 1995
GlaI GCGC 1 cut(s) 1026
GluI GCNGC 5 cut(s) 794, 1086, 1179, 1847, 1943
GsaI CCCAGC 2 cut(s) 389, 1836
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 3 cut(s) 1240, 1792, 1932
HhaI GCGC 1 cut(s) 1027
Hin1II CATG 9 cut(s) 220, 245, 284, 897, 1138, 1409, 1616, 1828, 1870
Hin6I GCGC 1 cut(s) 1025
HinP1I GCGC 1 cut(s) 1025
HindIII AAGCTT 2 cut(s) 136, 1110
HinfI GANTC 7 cut(s) 221, 272, 844, 1091, 1341, 1570, 1816
HphI GGTGA 4 cut(s) 173, 701, 710, 989
Hpy166II GTNNAC 2 cut(s) 1277, 1528
Hpy188I TCNGA 9 cut(s) 19, 172, 709, 771, 888, 1284, 1640, 1707, 1841
Hpy8I GTNNAC 2 cut(s) 1277, 1528
HpyAV CCTTC 7 cut(s) 96, 823, 853, 1331, 1630, 1948, 2001
HpyCH4III ACNGT 6 cut(s) 176, 329, 1519, 1532, 1546, 1859
HpyCH4IV ACGT 2 cut(s) 10, 1741
HpyCH4V TGCA 9 cut(s) 448, 793, 899, 1010, 1121, 1157, 1616, 1664, 1945
HpyF10VI GCNNNNNNNGC 9 cut(s) 260, 736, 802, 946, 1022, 1031, 1118, 1187, 1985
HpyF3I CTNAG 6 cut(s) 98, 147, 267, 425, 1182, 1448
HpySE526I ACGT 2 cut(s) 10, 1741
Hsp92II CATG 9 cut(s) 220, 245, 284, 897, 1138, 1409, 1616, 1828, 1870
HspAI GCGC 1 cut(s) 1025
KpnI GGTACC 1 cut(s) 1903
Ksp22I TGATCA 2 cut(s) 37, 340
Kzo9I GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
LguI GCTCTTC 2 cut(s) 261, 888
LmnI GCTCC 1 cut(s) 776
Lsp1109I GCAGC 5 cut(s) 805, 1072, 1165, 1833, 1929
LweI GCATC 3 cut(s) 372, 1366, 1929
MabI ACCWGGT 2 cut(s) 195, 1270
MaeI CTAG 5 cut(s) 458, 489, 606, 933, 1995
MaeII ACGT 2 cut(s) 10, 1741
MaeIII GTNAC 3 cut(s) 122, 562, 659
MalI GATC 9 cut(s) 6, 39, 84, 96, 342, 759, 1151, 1606, 1704
MboI GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
MfeI CAATTG 1 cut(s) 497
MflI RGATCY 3 cut(s) 4, 94, 1604
MhlI GDGCHC 2 cut(s) 883, 1990
MlsI TGGCCA 2 cut(s) 1240, 1932
MluNI TGGCCA 2 cut(s) 1240, 1932
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 2 cut(s) 793, 1659
Mox20I TGGCCA 2 cut(s) 1240, 1932
MscI TGGCCA 2 cut(s) 1240, 1932
MseI TTAA 8 cut(s) 207, 453, 1064, 1386, 1479, 1497, 1556, 1599
Msp20I TGGCCA 2 cut(s) 1240, 1932
MspA1I CMGCKG 2 cut(s) 1085, 1846
MspR9I CCNGG 2 cut(s) 197, 1272
MunI CAATTG 1 cut(s) 497
MvaI CCWGG 2 cut(s) 197, 1272
MvnI CGCG 2 cut(s) 924, 1027
MwoI GCNNNNNNNGC 9 cut(s) 260, 736, 802, 946, 1022, 1031, 1118, 1187, 1985
NcoI CCATGG 1 cut(s) 1405
NdeII GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
NlaIII CATG 9 cut(s) 220, 245, 284, 897, 1138, 1409, 1616, 1828, 1870
NlaIV GGNNCC 5 cut(s) 6, 111, 1606, 1901, 1989
NspV TTCGAA 1 cut(s) 1819
PagI TCATGA 3 cut(s) 280, 1134, 1866
PciSI GCTCTTC 2 cut(s) 261, 888
PfeI GAWTC 6 cut(s) 221, 844, 1091, 1341, 1570, 1816
PflFI GACNNNGTC 1 cut(s) 176
PflMI CCANNNNNTGG 1 cut(s) 1422
PkrI GCNGC 5 cut(s) 795, 1087, 1180, 1848, 1944
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
PpuMI RGGWCCY 1 cut(s) 1043
Psp5II RGGWCCY 1 cut(s) 1043
Psp6I CCWGG 2 cut(s) 195, 1270
PspFI CCCAGC 2 cut(s) 385, 1832
PspGI CCWGG 2 cut(s) 195, 1270
PspN4I GGNNCC 5 cut(s) 6, 111, 1606, 1901, 1989
PspPI GGNCC 4 cut(s) 109, 1043, 1277, 1855
PspPPI RGGWCCY 1 cut(s) 1043
PstI CTGCAG 2 cut(s) 795, 1947
PstNI CAGNNNCTG 2 cut(s) 905, 1088
PsuI RGATCY 3 cut(s) 4, 94, 1604
PsyI GACNNNGTC 1 cut(s) 176
PvuII CAGCTG 2 cut(s) 1085, 1846
RsaI GTAC 6 cut(s) 71, 188, 985, 1403, 1502, 1901
RsaNI GTAC 6 cut(s) 70, 187, 984, 1402, 1501, 1900
SapI GCTCTTC 2 cut(s) 261, 888
SaqAI TTAA 8 cut(s) 207, 453, 1064, 1386, 1479, 1497, 1556, 1599
SatI GCNGC 5 cut(s) 794, 1086, 1179, 1847, 1943
Sau3AI GATC 9 cut(s) 4, 37, 82, 94, 340, 757, 1149, 1604, 1702
Sau96I GGNCC 4 cut(s) 109, 1043, 1277, 1855
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 2 cut(s) 197, 1272
SduI GDGCHC 2 cut(s) 883, 1990
SexAI ACCWGGT 2 cut(s) 195, 1270
SfaNI GCATC 3 cut(s) 372, 1366, 1929
SfcI CTRYAG 2 cut(s) 791, 1943
SfuI TTCGAA 1 cut(s) 1819
SinI GGWCC 4 cut(s) 109, 1043, 1277, 1855
SmlI CTYRAG 4 cut(s) 90, 182, 1261, 1315
SmoI CTYRAG 4 cut(s) 90, 182, 1261, 1315
SsiI CCGC 5 cut(s) 509, 536, 674, 922, 1027
SspMI CTAG 5 cut(s) 458, 489, 606, 933, 1995
StyD4I CCNGG 2 cut(s) 195, 1270
StyI CCWWGG 3 cut(s) 457, 1405, 1535
TaaI ACNGT 6 cut(s) 176, 329, 1519, 1532, 1546, 1859
TaiI ACGT 2 cut(s) 13, 1744
TaqI TCGA 2 cut(s) 1327, 1819
TatI WGTACW 2 cut(s) 186, 983
TfiI GAWTC 6 cut(s) 221, 844, 1091, 1341, 1570, 1816
Tru1I TTAA 8 cut(s) 207, 453, 1064, 1386, 1479, 1497, 1556, 1599
Tru9I TTAA 8 cut(s) 207, 453, 1064, 1386, 1479, 1497, 1556, 1599
TscAI CASTG 4 cut(s) 181, 271, 1814, 1940
TseI GCWGC 5 cut(s) 793, 1085, 1178, 1846, 1942
TspDTI ATGAA 9 cut(s) 120, 269, 882, 1123, 1151, 1241, 1382, 1883, 1938
TspGWI ACGGA 1 cut(s) 1211
TspRI CASTG 4 cut(s) 181, 271, 1814, 1940
Tth111I GACNNNGTC 1 cut(s) 176
Van91I CCANNNNNTGG 1 cut(s) 1422
VpaK11BI GGWCC 4 cut(s) 109, 1043, 1277, 1855
XagI CCTNNNNNAGG 1 cut(s) 794
XapI RAATTY 4 cut(s) 20, 1552, 1564, 1962
XbaI TCTAGA 1 cut(s) 605
XmaJI CCTAGG 1 cut(s) 457
XspI CTAG 5 cut(s) 458, 489, 606, 933, 1995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.