MD11G1099100.v1.1

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000624
Physical Location & Seq
Reverse (-)
8257519 .. 8259770
2252 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1099100.v1.1.491

Sequence Viewer

Length: 2199 bp
ATGGATCCAAGTTCTTATCAACTGCCCGATTCCAATTCCAATTTCATCGACCAGACACTTTCCCCCAATTTCAATGAGTACCCAAGCAGCGATCCCTTTGTGGATCTTAGCTTTCTGGGCCAAAACCCTAGCAACTCTGCTCTGTCTCCGAGCTTGAGCCCCGAGGGAGATGACAGTGACTACTCTGACAGTGTGCTCAGGTACATAAACCAGGTGTTAATGGAGGAGGATATGGAGACAAAGCCCTGTATGTTTCATGACCCTTTGGCTGTCCAAGCCGCTGAGAAATCTCTCTTTGAGGTTCTTGGTGGGAAGTTTCCGCCTTCTCCGAATCAGCATCCGCTTAATTTTGAGAGCCCTGATGGTCGTTCTTCTGCAACCTTTAGTGATCATAGTGGAAATAATAGCTCTAGTCTTAGTTCTAGTACTAGCCATTTGGATGATTCTCGGAGTAGCGTTGATGTTATTGAGCATAAGCCCTCTATTTTGCAAAACCCAATTCCGGAAAACTTTGTTTTCCAGTCAAAGGCCAAGTCTCAGTTTTCGTCGAATGGGAATGGATTGGTGGGTTCTTATGTGAGTGAGCCTATGGTTTCTAATTTGTTTAGGGAGAGGGAATTGGTGTTACAGTTTAACAGAGGGGTAGAGGAGGCTAGTAAGTTTCTTCCTAGAGGTCAACTGATTGTTAACGTTGAGAATAACAAGCCGTACACAGTGGCGAATGGAAAGGCTGAAAATGTGGTGGTTAAGACGGAGAAGGATGAAGGCGAGTATTTTCCTACTAGTTCGAGAGGAAAGAAGAGTCATGAGAGGGAAGATGCAGATTTGGAGGTTGGGAGGAGTACCAAGCAATCAGCTGTTTATGAGGAGACGGAGGCTGATCTATCGGAGATTTTTGATAAGGTGCTTGTTTGTGGTGAGGGGAAACCCAAGCCTATTGTGAGTGAAGGTGAAGAAGTCTGTCTGGATGAAGCAAACAAGGCTCTGCAGCAGAATGGGCAATCTGTTGGAACCAGTAATGGAAAGACTCGTGCCAAGAAAAAGGGCGACAAGAAGGAAGTGATAGATTTGAGGACTCTACTCATTTCATGTGCACAAGCTGTTTCTTCTGATGATCGTAGGACTGCTAATGAGCTACTAAAGCAGATTAGGCATCACTCTTCCCCATTTGGCGATAGCTCGCAGAGGTTGGCTCATTGCTTTGCAAATGGCCTTGAAGCACGGTTGGCTGGCACTGGAACTCAGATATATACTGCTCTATCTTCTAAAAGAACGTCAGCTGCTGATATGCTGAAGGCTTACCAAACTTATTTTGAAGCCTGCCCGTTCATGAAGGTCGCGATAATCTTCGCAAACCACATGATTTCAAAATTAGCTGAGAAAGCAGAAACACTGCATATTATAGATTTTGGAATCCTCTACGGTTTTCAATGGCCTGCTCTCATTCGTTGCCTCTCAAGAAGAGCTGGTGGACCTCCAAAACTACGCATTACAGGGATAGAGCTTCCCCAAAGTGGTTTTCGACCTGAAGAAAGAGTCCAAGAGACAGGGCATCGTTTGGCAAAGTATTGTGAGCGGTATAATGTTCCTTTCGAGTACAATGGCATAGCAAAGAAATGGGAAGCTATCCAATATGAGGAACTCAAAGTCAAGAGAGATGAAGTGCTTGCTGTGAATTGTCTGTTCCGGTTTAAAAACCTACTTGACGAGACAGTTGTGGTAAACAGCCCAAGGGATACTGTTCTAAATTTCATTAGGAGCATGAATCCTGATATCTTTATCCATAGTGTCATTAATGGATCTTACAATGCCCCATTCTTCGTCACACGCTTCAGGGAGGCTCTATTCCACTTCTCTGCAATGTTTGATATGTTTGATACCAATTTATCTCGTGAGGATCAGATGAGATTGATGTTTGAGGAAGAGTTCCTTGGACGAGAGGTTGTAAACACAGTAGCTTGCGAGGGCTCTGAGAGAGTTGTGAGGCCTGAGACATATAAGCAGTGGCAGGCTCGGAACATGAGGGCTGGGTTCAAACAATTGCCATTGAACCGTGAACTCATGAACAAATTAAGGGCCAAGGTGAAACTGGGGTACCACCGTGATTTCATGGTTGATGAAGATGGAAACTGGATGCTGCAAGGATGGAAGGGCAGAATTCTCTACAGTTCCTCCTGTTGGGTACCGTCTAGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

733

Amino Acids

82.49

Weight (kDa)

5.81

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 357 - 727 7.6e-126 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 2094, 2182
AccB1I GGYRCC 2 cut(s) 2094, 2182
AccBSI CCGCTC 1 cut(s) 1576
AccII CGCG 1 cut(s) 1340
AccIII TCCGGA 1 cut(s) 502
AciI CCGC 4 cut(s) 279, 320, 341, 1576
AclI AACGTT 1 cut(s) 690
AclWI GGATC 5 cut(s) 12, 86, 111, 1807, 1905
AcsI RAATTY 2 cut(s) 1747, 2157
AcuI CTGAAG 3 cut(s) 1313, 1548, 1816
AfaI GTAC 8 cut(s) 80, 203, 427, 710, 844, 1598, 2096, 2184
AfiI CCNNNNNNNGG 5 cut(s) 502, 526, 1514, 1636, 2178
AgsI TTSAA 7 cut(s) 73, 1217, 1316, 1368, 1430, 2035, 2050
AhlI ACTAGT 1 cut(s) 782
AjnI CCWGG 1 cut(s) 210
AjuI GAANNNNNNNTTGG 6 cut(s) 26, 58, 1503, 1535, 1914, 1946
Alw21I GWGCWC 2 cut(s) 198, 1096
Alw26I GTCTC 7 cut(s) 150, 230, 540, 863, 1538, 1703, 1985
Alw44I GTGCAC 1 cut(s) 1092
AlwI GGATC 5 cut(s) 12, 86, 111, 1807, 1905
AlwNI CAGNNNCTG 1 cut(s) 1283
Ama87I CYCGRG 1 cut(s) 161
Aor13HI TCCGGA 1 cut(s) 502
AoxI GGCC 6 cut(s) 118, 528, 1210, 1433, 1985, 2076
ApaLI GTGCAC 1 cut(s) 1092
ApeKI GCWGC 4 cut(s) 87, 988, 1280, 2137
ApoI RAATTY 2 cut(s) 1747, 2157
ArsI GACNNNNNNTTYG 2 cut(s) 518, 550
AseI ATTAAT 1 cut(s) 1794
Asp718I GGTACC 2 cut(s) 2094, 2182
AspS9I GGNCC 3 cut(s) 118, 1472, 2076
AsuHPI GGTGA 3 cut(s) 929, 962, 2095
AvaI CYCGRG 1 cut(s) 161
AvaII GGWCC 1 cut(s) 1472
BaeGI GKGCMC 1 cut(s) 1096
BaeI ACNNNNGTAYC 4 cut(s) 2078, 2086, 2111, 2119
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 2094, 2182
BanII GRGCYC 3 cut(s) 161, 359, 1970
BauI CACGAG 2 cut(s) 1029, 1890
Bbv12I GWGCWC 2 cut(s) 198, 1096
BbvI GCAGC 4 cut(s) 99, 1000, 1267, 2124
BccI CCATC 3 cut(s) 356, 2117, 2139
BceAI ACGGC 1 cut(s) 691
BciT130I CCWGG 1 cut(s) 212
BciVI GTATCC 1 cut(s) 1729
BclI TGATCA 1 cut(s) 388
BcoDI GTCTC 7 cut(s) 150, 230, 540, 863, 1538, 1703, 1985
BcuI ACTAGT 1 cut(s) 782
BfaI CTAG 8 cut(s) 129, 411, 423, 429, 654, 669, 783, 2190
BfmI CTRYAG 2 cut(s) 986, 2164
BfuI GTATCC 1 cut(s) 1729
BisI GCNGC 5 cut(s) 88, 279, 989, 1281, 2138
BlsI GCNGC 5 cut(s) 89, 280, 990, 1282, 2139
BmcAI AGTACT 1 cut(s) 427
Bme1390I CCNGG 1 cut(s) 212
Bme18I GGWCC 1 cut(s) 1472
BmeT110I CYCGRG 1 cut(s) 161
BmgT120I GGNCC 3 cut(s) 118, 1472, 2076
BmiI GGNNCC 4 cut(s) 6, 1012, 2096, 2184
BmrFI CCNGG 1 cut(s) 212
BmrI ACTGGG 1 cut(s) 2099
BmsI GCATC 5 cut(s) 346, 808, 1162, 1561, 2124
BmuI ACTGGG 1 cut(s) 2099
BplI GAGNNNNNCTC 2 cut(s) 1177, 1209
Bpu10I CCTNAGC 1 cut(s) 197
BpuEI CTTGAG 2 cut(s) 175, 1441
BsaJI CCNNGG 4 cut(s) 162, 1730, 1930, 2079
BsaWI WCCGGW 2 cut(s) 502, 1686
BsaXI ACNNNNNCTCC 2 cut(s) 2156, 2186
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 526, 1514, 1636, 2178
Bse1I ACTGG 5 cut(s) 520, 1014, 1240, 2094, 2135
Bse3DI GCAATG 2 cut(s) 1195, 1866
BseAI TCCGGA 1 cut(s) 502
BseBI CCWGG 1 cut(s) 212
BseDI CCNNGG 4 cut(s) 162, 1730, 1930, 2079
BseGI GGATG 6 cut(s) 337, 445, 766, 973, 2139, 2150
BseLI CCNNNNNNNGG 5 cut(s) 502, 526, 1514, 1636, 2178
BseMI GCAATG 2 cut(s) 1195, 1866
BseMII CTCAG 7 cut(s) 211, 273, 551, 1256, 1368, 1962, 1980
BseNI ACTGG 5 cut(s) 520, 1014, 1240, 2094, 2135
BseRI GAGGAG 4 cut(s) 239, 662, 853, 881
BseSI GKGCMC 1 cut(s) 1096
BseXI GCAGC 4 cut(s) 99, 1000, 1267, 2124
BseYI CCCAGC 1 cut(s) 2027
Bsh1236I CGCG 1 cut(s) 1340
BshFI GGCC 6 cut(s) 120, 530, 1212, 1435, 1987, 2078
BshNI GGYRCC 2 cut(s) 2094, 2182
BsiHKAI GWGCWC 2 cut(s) 198, 1096
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 2 cut(s) 503, 1687
BslI CCNNNNNNNGG 5 cut(s) 502, 526, 1514, 1636, 2178
BsmAI GTCTC 7 cut(s) 150, 230, 540, 863, 1538, 1703, 1985
BsmBI CGTCTC 1 cut(s) 863
BsnI GGCC 6 cut(s) 120, 530, 1212, 1435, 1987, 2078
BsoBI CYCGRG 1 cut(s) 161
Bsp1286I GDGCHC 5 cut(s) 161, 198, 359, 1096, 1970
Bsp13I TCCGGA 1 cut(s) 502
Bsp143I GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
Bsp68I TCGCGA 1 cut(s) 1340
BspACI CCGC 4 cut(s) 279, 320, 341, 1576
BspANI GGCC 6 cut(s) 120, 530, 1212, 1435, 1987, 2078
BspCNI CTCAG 7 cut(s) 210, 274, 550, 1255, 1369, 1963, 1981
BspEI TCCGGA 1 cut(s) 502
BspFNI CGCG 1 cut(s) 1340
BspHI TCATGA 4 cut(s) 256, 805, 1329, 2061
BspLI GGNNCC 4 cut(s) 6, 1012, 2096, 2184
BspMAI CTGCAG 1 cut(s) 990
BspPI GGATC 5 cut(s) 12, 86, 111, 1807, 1905
BspQI GCTCTTC 1 cut(s) 1456
BspT107I GGYRCC 2 cut(s) 2094, 2182
BsrBI CCGCTC 1 cut(s) 1576
BsrDI GCAATG 2 cut(s) 1195, 1866
BsrI ACTGG 5 cut(s) 520, 1014, 1240, 2094, 2135
BssECI CCNNGG 4 cut(s) 162, 1730, 1930, 2079
BssMI GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
BssSI CACGAG 2 cut(s) 1029, 1890
BssT1I CCWWGG 3 cut(s) 1730, 1930, 2079
Bst2BI CACGAG 2 cut(s) 1029, 1890
Bst2UI CCWGG 1 cut(s) 212
Bst6I CTCTTC 4 cut(s) 794, 1165, 1456, 1917
BstC8I GCNNGC 7 cut(s) 1181, 1231, 1321, 1437, 1668, 1960, 2010
BstDEI CTNAG 9 cut(s) 107, 197, 282, 416, 537, 1242, 1377, 1971, 1989
BstF5I GGATG 6 cut(s) 337, 445, 766, 973, 2139, 2150
BstFNI CGCG 1 cut(s) 1340
BstKTI GATC 8 cut(s) 7, 94, 106, 391, 883, 1117, 1802, 1900
BstMAI GTCTC 7 cut(s) 150, 230, 540, 863, 1538, 1703, 1985
BstMBI GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
BstMWI GCNNNNNNNGC 8 cut(s) 117, 275, 980, 997, 1141, 1150, 1226, 1382
BstNI CCWGG 1 cut(s) 212
BstSCI CCNGG 1 cut(s) 210
BstSFI CTRYAG 2 cut(s) 986, 2164
BstSLI GKGCMC 1 cut(s) 1096
BstUI CGCG 1 cut(s) 1340
BstV1I GCAGC 4 cut(s) 99, 1000, 1267, 2124
BstX2I RGATCY 3 cut(s) 4, 103, 1799
BstYI RGATCY 3 cut(s) 4, 103, 1799
BsuI GTATCC 1 cut(s) 1729
BsuRI GGCC 6 cut(s) 120, 530, 1212, 1435, 1987, 2078
BtsCI GGATG 6 cut(s) 337, 445, 766, 973, 2139, 2150
BtsI GCAGTG 2 cut(s) 1391, 2009
BtsIMutI CAGTG 6 cut(s) 181, 196, 720, 1233, 1391, 2009
BtuMI TCGCGA 1 cut(s) 1340
Cac8I GCNNGC 7 cut(s) 1181, 1231, 1321, 1437, 1668, 1960, 2010
CaiI CAGNNNCTG 1 cut(s) 1283
CciI TCATGA 4 cut(s) 256, 805, 1329, 2061
Cfr13I GGNCC 3 cut(s) 118, 1472, 2076
CsiI ACCWGGT 1 cut(s) 210
Csp6I GTAC 8 cut(s) 79, 202, 426, 709, 843, 1597, 2095, 2183
CviAII CATG 9 cut(s) 257, 806, 1089, 1330, 1360, 1762, 2020, 2062, 2110
CviQI GTAC 8 cut(s) 79, 202, 426, 709, 843, 1597, 2095, 2183
DdeI CTNAG 9 cut(s) 107, 197, 282, 416, 537, 1242, 1377, 1971, 1989
DpnI GATC 8 cut(s) 6, 93, 105, 390, 882, 1116, 1801, 1899
DpnII GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
DraI TTTAAA 1 cut(s) 1693
Eam1104I CTCTTC 4 cut(s) 794, 1165, 1456, 1917
EarI CTCTTC 4 cut(s) 794, 1165, 1456, 1917
EciI GGCGGA 1 cut(s) 309
Eco130I CCWWGG 3 cut(s) 1730, 1930, 2079
Eco147I AGGCCT 1 cut(s) 1987
Eco24I GRGCYC 3 cut(s) 161, 359, 1970
Eco32I GATATC 1 cut(s) 1774
Eco47I GGWCC 1 cut(s) 1472
Eco57I CTGAAG 3 cut(s) 1313, 1548, 1816
Eco88I CYCGRG 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 2157
EcoRII CCWGG 1 cut(s) 210
EcoRV GATATC 1 cut(s) 1774
EcoT14I CCWWGG 3 cut(s) 1730, 1930, 2079
EcoT38I GRGCYC 3 cut(s) 161, 359, 1970
ErhI CCWWGG 3 cut(s) 1730, 1930, 2079
Esp3I CGTCTC 1 cut(s) 863
FaeI CATG 9 cut(s) 260, 809, 1092, 1333, 1363, 1765, 2023, 2065, 2113
FalI AAGNNNNNCTT 2 cut(s) 1914, 1946
FatI CATG 9 cut(s) 256, 805, 1088, 1329, 1359, 1761, 2019, 2061, 2109
FbaI TGATCA 1 cut(s) 388
Fnu4HI GCNGC 5 cut(s) 88, 279, 989, 1281, 2138
FokI GGATG 6 cut(s) 324, 452, 773, 980, 2146, 2157
FriOI GRGCYC 3 cut(s) 161, 359, 1970
Fsp4HI GCNGC 5 cut(s) 88, 279, 989, 1281, 2138
FspBI CTAG 8 cut(s) 129, 411, 423, 429, 654, 669, 783, 2190
GluI GCNGC 5 cut(s) 88, 279, 989, 1281, 2138
GsaI CCCAGC 1 cut(s) 2031
HaeIII GGCC 6 cut(s) 120, 530, 1212, 1435, 1987, 2078
HapII CCGG 2 cut(s) 503, 1687
Hin1II CATG 9 cut(s) 260, 809, 1092, 1333, 1363, 1765, 2023, 2065, 2113
HincII GTYRAC 2 cut(s) 677, 688
HindII GTYRAC 2 cut(s) 677, 688
HinfI GANTC 9 cut(s) 29, 331, 443, 802, 1027, 1075, 1413, 1536, 1765
HpaI GTTAAC 1 cut(s) 688
HpaII CCGG 2 cut(s) 503, 1687
HphI GGTGA 3 cut(s) 929, 962, 2095
Hpy166II GTNNAC 8 cut(s) 677, 688, 711, 1094, 1472, 1723, 1948, 2057
Hpy8I GTNNAC 8 cut(s) 677, 688, 711, 1094, 1472, 1723, 1948, 2057
Hpy99I CGWCG 1 cut(s) 550
HpyAV CCTTC 8 cut(s) 333, 751, 758, 941, 1048, 1288, 1327, 2143
HpyCH4IV ACGT 2 cut(s) 690, 1274
HpyCH4V TGCA 9 cut(s) 377, 490, 821, 988, 1094, 1205, 1396, 1859, 2140
HpyF10VI GCNNNNNNNGC 8 cut(s) 117, 275, 980, 997, 1141, 1150, 1226, 1382
HpyF3I CTNAG 9 cut(s) 107, 197, 282, 416, 537, 1242, 1377, 1971, 1989
HpySE526I ACGT 2 cut(s) 690, 1274
Hsp92II CATG 9 cut(s) 260, 809, 1092, 1333, 1363, 1765, 2023, 2065, 2113
Kpn2I TCCGGA 1 cut(s) 502
KpnI GGTACC 2 cut(s) 2098, 2186
Ksp22I TGATCA 1 cut(s) 388
KspAI GTTAAC 1 cut(s) 688
Kzo9I GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
LguI GCTCTTC 1 cut(s) 1456
LmnI GCTCC 1 cut(s) 1758
Lsp1109I GCAGC 4 cut(s) 99, 1000, 1267, 2124
LweI GCATC 5 cut(s) 346, 808, 1162, 1561, 2124
MabI ACCWGGT 1 cut(s) 210
MaeI CTAG 8 cut(s) 129, 411, 423, 429, 654, 669, 783, 2190
MaeII ACGT 2 cut(s) 690, 1274
MaeIII GTNAC 3 cut(s) 176, 624, 1822
MalI GATC 8 cut(s) 6, 93, 105, 390, 882, 1116, 1801, 1899
MbiI CCGCTC 1 cut(s) 1576
MboI GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
MfeI CAATTG 1 cut(s) 2039
MflI RGATCY 3 cut(s) 4, 103, 1799
MhlI GDGCHC 5 cut(s) 161, 198, 359, 1096, 1970
MlyI GAGTC 4 cut(s) 811, 1021, 1069, 1545
MmeI TCCRAC 1 cut(s) 988
MroI TCCGGA 1 cut(s) 502
MseI TTAA 8 cut(s) 218, 345, 633, 687, 747, 1692, 1794, 2072
MslI CAYNNNNRTG 1 cut(s) 438
MspA1I CMGCKG 3 cut(s) 281, 857, 1280
MspI CCGG 2 cut(s) 503, 1687
MspR9I CCNGG 1 cut(s) 212
MunI CAATTG 1 cut(s) 2039
MvaI CCWGG 1 cut(s) 212
MvnI CGCG 1 cut(s) 1340
MwoI GCNNNNNNNGC 8 cut(s) 117, 275, 980, 997, 1141, 1150, 1226, 1382
NdeII GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
NlaIII CATG 9 cut(s) 260, 809, 1092, 1333, 1363, 1765, 2023, 2065, 2113
NlaIV GGNNCC 4 cut(s) 6, 1012, 2096, 2184
NmuCI GTSAC 2 cut(s) 176, 1822
NruI TCGCGA 1 cut(s) 1340
PagI TCATGA 4 cut(s) 256, 805, 1329, 2061
PceI AGGCCT 1 cut(s) 1987
PciSI GCTCTTC 1 cut(s) 1456
PfeI GAWTC 5 cut(s) 29, 331, 443, 1413, 1765
PkrI GCNGC 5 cut(s) 89, 280, 990, 1282, 2139
PleI GAGTC 4 cut(s) 810, 1021, 1069, 1544
PpsI GAGTC 4 cut(s) 810, 1021, 1069, 1544
PshBI ATTAAT 1 cut(s) 1794
Psp1406I AACGTT 1 cut(s) 690
Psp6I CCWGG 1 cut(s) 210
PspFI CCCAGC 1 cut(s) 2027
PspGI CCWGG 1 cut(s) 210
PspN4I GGNNCC 4 cut(s) 6, 1012, 2096, 2184
PspPI GGNCC 3 cut(s) 118, 1472, 2076
PstI CTGCAG 1 cut(s) 990
PstNI CAGNNNCTG 1 cut(s) 1283
PsuI RGATCY 3 cut(s) 4, 103, 1799
PvuII CAGCTG 2 cut(s) 857, 1280
RruI TCGCGA 1 cut(s) 1340
RsaI GTAC 8 cut(s) 80, 203, 427, 710, 844, 1598, 2096, 2184
RsaNI GTAC 8 cut(s) 79, 202, 426, 709, 843, 1597, 2095, 2183
RseI CAYNNNNRTG 1 cut(s) 438
SapI GCTCTTC 1 cut(s) 1456
SaqAI TTAA 8 cut(s) 218, 345, 633, 687, 747, 1692, 1794, 2072
SatI GCNGC 5 cut(s) 88, 279, 989, 1281, 2138
Sau3AI GATC 8 cut(s) 4, 91, 103, 388, 880, 1114, 1799, 1897
Sau96I GGNCC 3 cut(s) 118, 1472, 2076
ScaI AGTACT 1 cut(s) 427
SchI GAGTC 4 cut(s) 811, 1021, 1069, 1545
ScrFI CCNGG 1 cut(s) 212
SduI GDGCHC 5 cut(s) 161, 198, 359, 1096, 1970
SexAI ACCWGGT 1 cut(s) 210
SfaNI GCATC 5 cut(s) 346, 808, 1162, 1561, 2124
SfcI CTRYAG 2 cut(s) 986, 2164
SinI GGWCC 1 cut(s) 1472
SmiMI CAYNNNNRTG 1 cut(s) 438
SmlI CTYRAG 2 cut(s) 154, 1456
SmoI CTYRAG 2 cut(s) 154, 1456
SpeI ACTAGT 1 cut(s) 782
SseBI AGGCCT 1 cut(s) 1987
SsiI CCGC 4 cut(s) 279, 320, 341, 1576
SspMI CTAG 8 cut(s) 129, 411, 423, 429, 654, 669, 783, 2190
StuI AGGCCT 1 cut(s) 1987
StyD4I CCNGG 1 cut(s) 210
StyI CCWWGG 3 cut(s) 1730, 1930, 2079
TaiI ACGT 2 cut(s) 693, 1277
TaqI TCGA 5 cut(s) 48, 548, 788, 1522, 1593
TatI WGTACW 2 cut(s) 425, 1596
TauI GCSGC 1 cut(s) 281
TfiI GAWTC 5 cut(s) 29, 331, 443, 1413, 1765
Tru1I TTAA 8 cut(s) 218, 345, 633, 687, 747, 1692, 1794, 2072
Tru9I TTAA 8 cut(s) 218, 345, 633, 687, 747, 1692, 1794, 2072
TscAI CASTG 6 cut(s) 181, 196, 720, 1240, 1398, 2009
TseFI GTSAC 2 cut(s) 176, 1822
TseI GCWGC 4 cut(s) 87, 988, 1280, 2137
Tsp45I GTSAC 2 cut(s) 176, 1822
TspGWI ACGGA 2 cut(s) 767, 887
TspRI CASTG 6 cut(s) 181, 196, 720, 1240, 1398, 2009
VneI GTGCAC 1 cut(s) 1092
VpaK11BI GGWCC 1 cut(s) 1472
VspI ATTAAT 1 cut(s) 1794
XapI RAATTY 2 cut(s) 1747, 2157
XcmI CCANNNNNNNNNTGG 1 cut(s) 2086
XspI CTAG 8 cut(s) 129, 411, 423, 429, 654, 669, 783, 2190
ZrmI AGTACT 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.