Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000873

Physical Location & Seq

Genomic Coordinates Reverse (-)

15208498 .. 15211034

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G36290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGGCTACTGGATCAACAACCGATTCCGCCAGGTCTCCTTCCTCAGGTGTTCTCCAAAAGCTGTTATTACTATTCTCTGTCTGTATAGCTACTTCAACTTATAAAGCAATCCAGCCTCCTCCATCAAAGCTATGTGGCTCTCCTGATGGTCCATCCATCACAGGACCAAGGATTAAGCTAAGAGACGGAAGGCAGTTAGCTTACAAAGAGCATGGAGTTCCTAGAGATGAAGCTACTCATAAAATCATCGTTGTCCATGGATCTGATAGTTGCAGACATGATAATGCTTTCGCAGCTCTACTATCACCGGATATTAAGGAAGGACTAGGTGTGTATATGGTTTCATTTGATAGACCTGGTTATGCAGAGAGTGATCCTGACCCAAACCGTACTCCTAAAAGCTTGGCTTTGGACATTGAAGAGCTTGCTGATCAGTTGAGTCTAGGATCGAAGTTCTATGTCATCGGTTACTCGATGGGAGGACAAGCTACTTGGGCATGCCTTAAATACATTCCTCACAGGTTGGCTGGAGTAACGCTTGTTGCTCCAGTGGTGAACTATTGGTGGAAGAACTTTCCATCAGAGATCTCAACCGAAGCTTTTAACCAACAAGGGAGAAATGACCAATGGGCGGTTCGTGTTGCACACTATGCTCCTTGGCTTACTCATTGGTGGAACTCCCAGAGCTGGTTCCCTGGATCAAGTGTTGTGGCTCGCAATCTCGGTATGTTGTCCAAAGCAGACAAAGAGATCATGTTTAAGCTCGGTGCTGCAAGGAGCCAACATGAGGCACAAATAAGGCAACAAGGAACACACGAGACATTGCACCGTGACATGATTGTTGGATTTGGAACTTGGGAGTTCGATCCAATGGAGCTCGAGAATCTGTTCCCGAACAATGAAGGATCAGTGCACTTGTGGCAGGGAGATGATGATGTGCTTGTCCCTGTGACTCTGCAACGTTACATTGCGAAGAAGCTGCCATGGATCCATTACCATGAGATTCCTGGAGCAGGGCATTTGTTCCCGTTTGCTCCAGGTATGGTTAATAACATTGTTAAAACGCTCTTAACCAATGATGGAGTGAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 Hydrolase_4

Protein Analysis

364

Amino Acids

40.46

Weight (kDa)

6.92

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	79 - 340	2.6e-07	Serine aminopeptidase, S33
Abhydrolase_6	PF12697	82 - 345	4.1e-13	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	110 - 342	1.2e-11	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74300 AT1G74300 AT2G36290 AT2G36290
fragaria_vesca	FvH4_6g18490 FvH4_6g18490 FvH4_6g18490 FvH4_7g05600 FvH4_7g05600
malus_domestica	MD07G1064200.v1.1 MD07G1064400.v1.1 MD07G1064600.v1.1 MD07G1065000.v1.1 MD07G1065100.v1.1 MD07G1065200.v1.1 MD07G1065300.v1.1 MD12G1024000.v1.1 MD14G1021400.v1.1
prunus_persica	Prupe.2G079000_v2.0.a1 Prupe.2G079000_v2.0.a1 Prupe.2G079000_v2.0.a1 Prupe.7G112400_v2.0.a1
pyrus_communis	pycom07g04990 pycom12g02260 pycom14g02080
rosa_chinensis	RchiOBHm_Chr1g0332431 RchiOBHm_Chr1g0332511 RchiOBHm_Chr1g0332561 RchiOBHm_Chr3g0473031
rosa_laevigata	RLG00000024036 RLG00000029596 RLG00000029656 RLG00000029665 RLG00000029670
rosa_multiflora	Rmu_sc0002307.1_g000026 Rmu_sc0006336.1_g000009 Rmu_sc0007458.1_g000015 Rmu_ssc0000161.1_g000006
rosa_roxburghii	Rroxscaffold_4G00318150 Rroxscaffold_4G00318180 Rroxscaffold_6G00408360
rosa_rugosa	Rorug01G0100700 Rorug01G0100800 Rorug01G0100900 Rorug01G0101600 Rorug01G0101600 Rorug03G0130800
rosa_samantha	Rh1AG124900 Rh1AG126000 Rh1AG126200 Rh1BG095300 Rh1CG119000 Rh1CG119900 Rh1CG120100 Rh1DG129800 Rh1DG130300 Rh1DG130400 Rh3AG182600 Rh3BG208900 Rh3CG206000 Rh3DG206000
rosa_wichuraiana	Rw0G002590 Rw1G010150 Rw1G010180 Rw1G010700 Rw3G016050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	102
AciI	CCGC	2 cut(s)	27, 632
AclI	AACGTT	1 cut(s)	961
AclWI	GGATC	9 cut(s)	19, 268, 368, 454, 706, 860, 913, 982, 995
AfaI	GTAC	1 cut(s)	391
AfiI	CCNNNNNNNGG	5 cut(s)	44, 631, 687, 787, 1013
AgsI	TTSAA	2 cut(s)	96, 419
AjnI	CCWGG	5 cut(s)	29, 355, 694, 1006, 1036
AjuI	GAANNNNNNNTTGG	2 cut(s)	618, 650
Alw21I	GWGCWC	2 cut(s)	879, 915
Alw26I	GTCTC	3 cut(s)	39, 177, 812
Alw44I	GTGCAC	1 cut(s)	911
AlwI	GGATC	9 cut(s)	19, 268, 368, 454, 706, 860, 913, 982, 995
Ama87I	CYCGRG	1 cut(s)	878
ApaLI	GTGCAC	1 cut(s)	911
ApeKI	GCWGC	3 cut(s)	293, 770, 979
Asp700I	GAANNNNTTC	1 cut(s)	887
AspS9I	GGNCC	2 cut(s)	149, 164
AsuHPI	GGTGA	2 cut(s)	297, 565
AvaI	CYCGRG	1 cut(s)	878
AvaII	GGWCC	2 cut(s)	149, 164
AxyI	CCTNAGG	1 cut(s)	43
BaeGI	GKGCMC	1 cut(s)	915
BamHI	GGATCC	1 cut(s)	987
BanII	GRGCYC	1 cut(s)	879
BarI	GAAGNNNNNNTAC	2 cut(s)	76, 108
BauI	CACGAG	1 cut(s)	815
Bbv12I	GWGCWC	2 cut(s)	879, 915
BbvI	GCAGC	3 cut(s)	305, 757, 966
BccI	CCATC	7 cut(s)	130, 140, 160, 164, 469, 586, 1073
BcgI	CGANNNNNNTGC	2 cut(s)	961, 995
BciT130I	CCWGG	5 cut(s)	31, 357, 696, 1008, 1038
BclI	TGATCA	1 cut(s)	430
BcoDI	GTCTC	3 cut(s)	39, 177, 812
BfaI	CTAG	3 cut(s)	222, 326, 443
BglII	AGATCT	1 cut(s)	585
BisI	GCNGC	3 cut(s)	294, 771, 980
BlsI	GCNGC	3 cut(s)	295, 772, 981
Bme1390I	CCNGG	5 cut(s)	31, 357, 696, 1008, 1038
Bme18I	GGWCC	2 cut(s)	149, 164
BmeT110I	CYCGRG	1 cut(s)	878
BmgT120I	GGNCC	2 cut(s)	149, 164
BmiI	GGNNCC	3 cut(s)	692, 779, 989
BmrFI	CCNGG	5 cut(s)	31, 357, 696, 1008, 1038
BpmI	CTGGAG	4 cut(s)	531, 549, 1020, 1029
BsaI	GGTCTC	1 cut(s)	39
BsaJI	CCNNGG	5 cut(s)	167, 256, 656, 694, 983
BsaWI	WCCGGW	1 cut(s)	307
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 631, 687, 787, 1013
Bse1I	ACTGG	2 cut(s)	13, 548
Bse21I	CCTNAGG	1 cut(s)	43
Bse3DI	GCAATG	2 cut(s)	821, 966
BseBI	CCWGG	5 cut(s)	31, 357, 696, 1008, 1038
BseDI	CCNNGG	5 cut(s)	167, 256, 656, 694, 983
BseGI	GGATG	1 cut(s)	152
BseLI	CCNNNNNNNGG	5 cut(s)	44, 631, 687, 787, 1013
BseMI	GCAATG	2 cut(s)	821, 966
BseMII	CTCAG	1 cut(s)	57
BseNI	ACTGG	2 cut(s)	13, 548
BseRI	GAGGAG	1 cut(s)	108
BseSI	GKGCMC	1 cut(s)	915
BseXI	GCAGC	3 cut(s)	305, 757, 966
BsiHKAI	GWGCWC	2 cut(s)	879, 915
BsiHKCI	CYCGRG	1 cut(s)	878
BsiSI	CCGG	1 cut(s)	308
BslFI	GGGAC	1 cut(s)	929
BslI	CCNNNNNNNGG	5 cut(s)	44, 631, 687, 787, 1013
BsmAI	GTCTC	3 cut(s)	39, 177, 812
BsmBI	CGTCTC	1 cut(s)	177
BsmFI	GGGAC	1 cut(s)	929
Bso31I	GGTCTC	1 cut(s)	39
BsoBI	CYCGRG	1 cut(s)	878
Bsp1286I	GDGCHC	2 cut(s)	879, 915
Bsp19I	CCATGG	2 cut(s)	256, 983
BspACI	CCGC	2 cut(s)	27, 632
BspCNI	CTCAG	1 cut(s)	56
BspLI	GGNNCC	3 cut(s)	692, 779, 989
BspPI	GGATC	9 cut(s)	19, 268, 368, 454, 706, 860, 913, 982, 995
BspQI	GCTCTTC	1 cut(s)	414
BspTNI	GGTCTC	1 cut(s)	39
BsrDI	GCAATG	2 cut(s)	821, 966
BsrI	ACTGG	2 cut(s)	13, 548
BssECI	CCNNGG	5 cut(s)	167, 256, 656, 694, 983
BssSI	CACGAG	1 cut(s)	815
BssT1I	CCWWGG	4 cut(s)	167, 256, 656, 983
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	5 cut(s)	31, 357, 696, 1008, 1038
Bst4CI	ACNGT	2 cut(s)	389, 830
Bst6I	CTCTTC	1 cut(s)	414
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstC8I	GCNNGC	3 cut(s)	426, 499, 715
BstDEI	CTNAG	2 cut(s)	43, 179
BstDSI	CCRYGG	2 cut(s)	256, 983
BstENI	CCTNNNNNAGG	2 cut(s)	42, 1011
BstF5I	GGATG	1 cut(s)	152
BstMAI	GTCTC	3 cut(s)	39, 177, 812
BstMWI	GCNNNNNNNGC	4 cut(s)	293, 494, 650, 919
BstNI	CCWGG	5 cut(s)	31, 357, 696, 1008, 1038
BstNSI	RCATGY	1 cut(s)	501
BstSCI	CCNGG	5 cut(s)	29, 355, 694, 1006, 1036
BstSLI	GKGCMC	1 cut(s)	915
BstV1I	GCAGC	3 cut(s)	305, 757, 966
BstX2I	RGATCY	3 cut(s)	260, 585, 987
BstYI	RGATCY	3 cut(s)	260, 585, 987
Bsu36I	CCTNAGG	1 cut(s)	43
BtgI	CCRYGG	2 cut(s)	256, 983
BtsCI	GGATG	1 cut(s)	152
BtsIMutI	CAGTG	2 cut(s)	555, 915
Cac8I	GCNNGC	3 cut(s)	426, 499, 715
Cfr13I	GGNCC	2 cut(s)	149, 164
CsiI	ACCWGGT	1 cut(s)	355
Csp6I	GTAC	1 cut(s)	390
CspCI	CAANNNNNGTGG	2 cut(s)	690, 725
CviAII	CATG	9 cut(s)	212, 257, 278, 498, 754, 785, 835, 984, 998
CviQI	GTAC	1 cut(s)	390
DdeI	CTNAG	2 cut(s)	43, 179
Eam1104I	CTCTTC	1 cut(s)	414
EarI	CTCTTC	1 cut(s)	414
EciI	GGCGGA	1 cut(s)	16
Ecl136II	GAGCTC	1 cut(s)	877
Eco130I	CCWWGG	4 cut(s)	167, 256, 656, 983
Eco24I	GRGCYC	1 cut(s)	879
Eco31I	GGTCTC	1 cut(s)	39
Eco47I	GGWCC	2 cut(s)	149, 164
Eco53kI	GAGCTC	1 cut(s)	877
Eco81I	CCTNAGG	1 cut(s)	43
Eco88I	CYCGRG	1 cut(s)	878
EcoICRI	GAGCTC	1 cut(s)	877
EcoNI	CCTNNNNNAGG	2 cut(s)	42, 1011
EcoRII	CCWGG	5 cut(s)	29, 355, 694, 1006, 1036
EcoT14I	CCWWGG	4 cut(s)	167, 256, 656, 983
EcoT38I	GRGCYC	1 cut(s)	879
ErhI	CCWWGG	4 cut(s)	167, 256, 656, 983
Esp3I	CGTCTC	1 cut(s)	177
FaeI	CATG	9 cut(s)	215, 260, 281, 501, 757, 788, 838, 987, 1001
FalI	AAGNNNNNCTT	2 cut(s)	391, 423
FaqI	GGGAC	1 cut(s)	929
FatI	CATG	9 cut(s)	211, 256, 277, 497, 753, 784, 834, 983, 997
FbaI	TGATCA	1 cut(s)	430
Fnu4HI	GCNGC	3 cut(s)	294, 771, 980
FokI	GGATG	1 cut(s)	139
FriOI	GRGCYC	1 cut(s)	879
Fsp4HI	GCNGC	3 cut(s)	294, 771, 980
FspBI	CTAG	3 cut(s)	222, 326, 443
GluI	GCNGC	3 cut(s)	294, 771, 980
GsuI	CTGGAG	4 cut(s)	531, 549, 1020, 1029
HapII	CCGG	1 cut(s)	308
Hin1II	CATG	9 cut(s)	215, 260, 281, 501, 757, 788, 838, 987, 1001
HindIII	AAGCTT	2 cut(s)	400, 597
HinfI	GANTC	5 cut(s)	23, 439, 883, 952, 1003
HpaII	CCGG	1 cut(s)	308
HphI	GGTGA	2 cut(s)	297, 565
Hpy166II	GTNNAC	2 cut(s)	556, 913
Hpy188I	TCNGA	2 cut(s)	265, 583
Hpy188III	TCNNGA	4 cut(s)	143, 377, 880, 892
Hpy8I	GTNNAC	2 cut(s)	556, 913
HpyAV	CCTTC	4 cut(s)	48, 183, 314, 896
HpyCH4III	ACNGT	2 cut(s)	389, 830
HpyCH4IV	ACGT	1 cut(s)	961
HpyCH4V	TGCA	7 cut(s)	273, 365, 644, 773, 826, 913, 958
HpyF10VI	GCNNNNNNNGC	4 cut(s)	293, 494, 650, 919
HpyF3I	CTNAG	2 cut(s)	43, 179
HpySE526I	ACGT	1 cut(s)	961
Hsp92II	CATG	9 cut(s)	215, 260, 281, 501, 757, 788, 838, 987, 1001
Ksp22I	TGATCA	1 cut(s)	430
LguI	GCTCTTC	1 cut(s)	414
LmnI	GCTCC	6 cut(s)	550, 658, 777, 874, 1010, 1039
Lsp1109I	GCAGC	3 cut(s)	305, 757, 966
MabI	ACCWGGT	1 cut(s)	355
MaeI	CTAG	3 cut(s)	222, 326, 443
MaeII	ACGT	1 cut(s)	961
MaeIII	GTNAC	5 cut(s)	467, 532, 830, 949, 962
MboII	GAAGA	3 cut(s)	431, 580, 985
MflI	RGATCY	3 cut(s)	260, 585, 987
MhlI	GDGCHC	2 cut(s)	879, 915
MlyI	GAGTC	2 cut(s)	448, 946
MmeI	TCCRAC	1 cut(s)	823
MnlI	CCTC	6 cut(s)	52, 126, 129, 473, 525, 781
MroXI	GAANNNNTTC	1 cut(s)	887
MseI	TTAA	8 cut(s)	174, 315, 504, 603, 759, 1047, 1059, 1070
MslI	CAYNNNNRTG	2 cut(s)	282, 996
MspI	CCGG	1 cut(s)	308
MspR9I	CCNGG	5 cut(s)	31, 357, 696, 1008, 1038
MvaI	CCWGG	5 cut(s)	31, 357, 696, 1008, 1038
MwoI	GCNNNNNNNGC	4 cut(s)	293, 494, 650, 919
NcoI	CCATGG	2 cut(s)	256, 983
NlaIII	CATG	9 cut(s)	215, 260, 281, 501, 757, 788, 838, 987, 1001
NlaIV	GGNNCC	3 cut(s)	692, 779, 989
NmuCI	GTSAC	2 cut(s)	830, 949
NspI	RCATGY	1 cut(s)	501
PaeI	GCATGC	1 cut(s)	501
PaeR7I	CTCGAG	1 cut(s)	878
PciSI	GCTCTTC	1 cut(s)	414
PdmI	GAANNNNTTC	1 cut(s)	887
PfeI	GAWTC	3 cut(s)	23, 883, 1003
PfoI	TCCNGGA	1 cut(s)	1006
PkrI	GCNGC	3 cut(s)	295, 772, 981
PleI	GAGTC	2 cut(s)	447, 946
PpsI	GAGTC	2 cut(s)	447, 946
PsiI	TTATAA	1 cut(s)	102
Psp124BI	GAGCTC	1 cut(s)	879
Psp1406I	AACGTT	1 cut(s)	961
Psp6I	CCWGG	5 cut(s)	29, 355, 694, 1006, 1036
PspGI	CCWGG	5 cut(s)	29, 355, 694, 1006, 1036
PspN4I	GGNNCC	3 cut(s)	692, 779, 989
PspPI	GGNCC	2 cut(s)	149, 164
PsuI	RGATCY	3 cut(s)	260, 585, 987
RsaI	GTAC	1 cut(s)	391
RsaNI	GTAC	1 cut(s)	390
RseI	CAYNNNNRTG	2 cut(s)	282, 996
SacI	GAGCTC	1 cut(s)	879
SapI	GCTCTTC	1 cut(s)	414
SaqAI	TTAA	8 cut(s)	174, 315, 504, 603, 759, 1047, 1059, 1070
SatI	GCNGC	3 cut(s)	294, 771, 980
Sau96I	GGNCC	2 cut(s)	149, 164
SchI	GAGTC	2 cut(s)	448, 946
ScrFI	CCNGG	5 cut(s)	31, 357, 696, 1008, 1038
SduI	GDGCHC	2 cut(s)	879, 915
SexAI	ACCWGGT	1 cut(s)	355
Sfr274I	CTCGAG	1 cut(s)	878
SinI	GGWCC	2 cut(s)	149, 164
SlaI	CTCGAG	1 cut(s)	878
SmiMI	CAYNNNNRTG	2 cut(s)	282, 996
SmlI	CTYRAG	1 cut(s)	878
SmoI	CTYRAG	1 cut(s)	878
SphI	GCATGC	1 cut(s)	501
SsiI	CCGC	2 cut(s)	27, 632
SspMI	CTAG	3 cut(s)	222, 326, 443
SstI	GAGCTC	1 cut(s)	879
StyD4I	CCNGG	5 cut(s)	29, 355, 694, 1006, 1036
StyI	CCWWGG	4 cut(s)	167, 256, 656, 983
TaaI	ACNGT	2 cut(s)	389, 830
TaiI	ACGT	1 cut(s)	964
TaqI	TCGA	4 cut(s)	449, 473, 864, 879
TfiI	GAWTC	3 cut(s)	23, 883, 1003
Tru1I	TTAA	8 cut(s)	174, 315, 504, 603, 759, 1047, 1059, 1070
Tru9I	TTAA	8 cut(s)	174, 315, 504, 603, 759, 1047, 1059, 1070
TscAI	CASTG	2 cut(s)	555, 915
TseFI	GTSAC	2 cut(s)	830, 949
TseI	GCWGC	3 cut(s)	293, 770, 979
Tsp45I	GTSAC	2 cut(s)	830, 949
TspDTI	ATGAA	3 cut(s)	243, 333, 915
TspGWI	ACGGA	1 cut(s)	201
TspRI	CASTG	2 cut(s)	555, 915
VneI	GTGCAC	1 cut(s)	911
VpaK11BI	GGWCC	2 cut(s)	149, 164
XagI	CCTNNNNNAGG	2 cut(s)	42, 1011
XceI	RCATGY	1 cut(s)	501
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1004
XhoI	CTCGAG	1 cut(s)	878
XmnI	GAANNNNTTC	1 cut(s)	887
XspI	CTAG	3 cut(s)	222, 326, 443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.