Prupe.2G079000_v2.0.a1

Alpha/beta hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000873
Physical Location & Seq
Reverse (-)
12111923 .. 12115024
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G079000.3

Sequence Viewer

Length: 1044 bp
ATGTTTAAGAGACTCACATTTCTCTTGTTAGTTGGGTTGCTGGCATGGGCATATCAGGCCATCCAACCACCCCCTCCAAAACTTTGTGGCTCCCCCAGCGGCCCACTCGTCACGGCATCTAGAATAAAACTGAGGGATGGAAGATATTTGGCCTACAAGGAACATGGTGTTCCAAAAGAAGTGGCCAGATATAAGATTATTTATGTTCATGCCTTTGGTTCTACCAGACATGATGCACTGATTGCAACAACCGTCACTAAGGAAGTGCTTGAAGATTTAGGGGTGTACATTGTTTCTTTTGACAGACCGGGATATGGTGAAAGTGATCCAGATCCTAAGCGAACGCGGAAGAGTTTGGCTTTAGATATAGAAGAGCTTGGTGACCAGCTGGGACTGGGATCCAAATTTTATGTAATTGGATATTCTATGGGTGGACAGGTCATCTGGAAGTGTCTTCGGTACATCCCTCACAGGCTAGCAGGAGCAACACTGATTGCTCCTGTTGTCAACTATTGGTGGCCAGGCTTGCCTGCCAACTTGTCCAGTGCCTATTATAAACAACCTCCGCGGGATCAATGGGCACTTCGAGTTGCTCACCACATACCATGGCTAATCTACTGGTGGAACACTCAGAAACTATTTCCTACATCCAGTGTTGTATCCAGTAGTAACCCAAATATGAATATTTTTTCTCGCCAAGATTTGGAGATCATACGGAATGCGAACGTTTCTGAAAGAGATAACAAGGTACAGGCCAAGCAGCAAGGAGAATTTGAGTCAGTCCTTCGTGACATGATGGTTGGATTTGGGACCTGGGAATTTGATCCTCTAGATCTGAAGAACCCTTTTGCCGGTAAGGAAGGCTCTGTCCATCTATGGCAGGGTGATGAAGATCTGCTTGTCCCAGTCGAACTGCAACGCTATATTGCAGAAAAGCTTCCATGGATTCACTACCATGAGTTACCAGGTGCTGGACACTTGTTTCCAGCTGCAGATGGTATCAGTGAAGCTATCTTAAAGGCACTTCTGATTGAAGAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6 Hydrolase_4

Protein Analysis

348

Amino Acids

39.28

Weight (kDa)

7.77

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 555
AccB7I CCANNNNNTGG 2 cut(s) 703, 971
AccII CGCG 2 cut(s) 346, 568
AciI CCGC 4 cut(s) 99, 346, 566, 568
AclI AACGTT 1 cut(s) 726
AclWI GGATC 6 cut(s) 320, 326, 393, 406, 579, 818
AcoI YGGCCR 2 cut(s) 183, 518
AcsI RAATTY 3 cut(s) 404, 770, 818
AcuI CTGAAG 1 cut(s) 857
AfaI GTAC 3 cut(s) 287, 461, 750
AfiI CCNNNNNNNGG 4 cut(s) 314, 703, 851, 971
AgsI TTSAA 2 cut(s) 272, 1034
AjnI CCWGG 3 cut(s) 520, 812, 964
AluBI AGCT 5 cut(s) 376, 388, 937, 989, 1010
AluI AGCT 5 cut(s) 376, 388, 937, 989, 1010
Alw26I GTCTC 1 cut(s) 4
AlwI GGATC 6 cut(s) 320, 326, 393, 406, 579, 818
AlwNI CAGNNNCTG 1 cut(s) 971
AoxI GGCC 6 cut(s) 57, 100, 150, 183, 518, 753
ApeKI GCWGC 2 cut(s) 760, 989
ApoI RAATTY 3 cut(s) 404, 770, 818
Asp700I GAANNNNTTC 1 cut(s) 936
AspS9I GGNCC 2 cut(s) 101, 810
AsuC2I CCSGG 1 cut(s) 309
AsuHPI GGTGA 4 cut(s) 329, 392, 587, 896
AsuNHI GCTAGC 1 cut(s) 475
AvaII GGWCC 1 cut(s) 810
BaeGI GKGCMC 1 cut(s) 583
BalI TGGCCA 2 cut(s) 185, 520
BamHI GGATCC 1 cut(s) 398
BbsI GAAGAC 1 cut(s) 446
BbvI GCAGC 2 cut(s) 772, 976
BccI CCATC 5 cut(s) 68, 131, 790, 879, 989
BceAI ACGGC 1 cut(s) 129
BciT130I CCWGG 3 cut(s) 522, 814, 966
BciVI GTATCC 1 cut(s) 670
BcnI CCSGG 1 cut(s) 309
BcoDI GTCTC 1 cut(s) 4
BfaI CTAG 3 cut(s) 120, 476, 830
BfmI CTRYAG 1 cut(s) 990
BfuI GTATCC 1 cut(s) 670
BglII AGATCT 2 cut(s) 832, 892
BisI GCNGC 3 cut(s) 100, 761, 990
BlsI GCNGC 3 cut(s) 101, 762, 991
Bme1390I CCNGG 4 cut(s) 309, 522, 814, 966
Bme18I GGWCC 1 cut(s) 810
BmgT120I GGNCC 2 cut(s) 101, 810
BmiI GGNNCC 3 cut(s) 91, 400, 811
BmrFI CCNGG 4 cut(s) 309, 522, 814, 966
BmrI ACTGGG 2 cut(s) 404, 899
BmsI GCATC 2 cut(s) 125, 223
BmtI GCTAGC 1 cut(s) 479
BmuI ACTGGG 2 cut(s) 404, 899
BpiI GAAGAC 1 cut(s) 446
Bpu10I CCTNAGC 1 cut(s) 336
BpuMI CCSGG 1 cut(s) 309
BsaBI GATNNNNATC 2 cut(s) 330, 891
BsaJI CCNNGG 4 cut(s) 566, 605, 813, 941
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 703, 851, 971
Bse118I RCCGGY 1 cut(s) 851
Bse1I ACTGG 6 cut(s) 399, 543, 623, 651, 663, 905
Bse8I GATNNNNATC 2 cut(s) 330, 891
BseBI CCWGG 3 cut(s) 522, 814, 966
BseDI CCNNGG 4 cut(s) 566, 605, 813, 941
BseGI GGATG 4 cut(s) 60, 142, 462, 647
BseJI GATNNNNATC 2 cut(s) 330, 891
BseLI CCNNNNNNNGG 4 cut(s) 314, 703, 851, 971
BseMII CTCAG 2 cut(s) 122, 644
BseNI ACTGG 6 cut(s) 399, 543, 623, 651, 663, 905
BseSI GKGCMC 1 cut(s) 583
BseXI GCAGC 2 cut(s) 772, 976
BseYI CCCAGC 2 cut(s) 95, 388
Bsh1236I CGCG 2 cut(s) 346, 568
BshFI GGCC 6 cut(s) 59, 102, 152, 185, 520, 755
BsiSI CCGG 2 cut(s) 308, 852
BslFI GGGAC 3 cut(s) 405, 823, 887
BslI CCNNNNNNNGG 4 cut(s) 314, 703, 851, 971
BsmAI GTCTC 1 cut(s) 4
BsmFI GGGAC 3 cut(s) 405, 823, 887
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 6 cut(s) 59, 102, 152, 185, 520, 755
Bsp1286I GDGCHC 1 cut(s) 583
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
Bsp19I CCATGG 2 cut(s) 605, 941
BspACI CCGC 4 cut(s) 99, 346, 566, 568
BspANI GGCC 6 cut(s) 59, 102, 152, 185, 520, 755
BspCNI CTCAG 2 cut(s) 123, 643
BspFNI CGCG 2 cut(s) 346, 568
BspLI GGNNCC 3 cut(s) 91, 400, 811
BspMAI CTGCAG 1 cut(s) 994
BspOI GCTAGC 1 cut(s) 479
BspPI GGATC 6 cut(s) 320, 326, 393, 406, 579, 818
BspQI GCTCTTC 1 cut(s) 366
BsrFI RCCGGY 1 cut(s) 851
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 6 cut(s) 399, 543, 623, 651, 663, 905
BssAI RCCGGY 1 cut(s) 851
BssECI CCNNGG 4 cut(s) 566, 605, 813, 941
BssMI GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
BssT1I CCWWGG 2 cut(s) 605, 941
Bst2UI CCWGG 3 cut(s) 522, 814, 966
Bst4CI ACNGT 1 cut(s) 253
Bst6I CTCTTC 3 cut(s) 344, 366, 1029
BstAPI GCANNNNNTGC 1 cut(s) 242
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 4 cut(s) 42, 477, 527, 531
BstDEI CTNAG 4 cut(s) 131, 258, 336, 630
BstDSI CCRYGG 3 cut(s) 566, 605, 941
BstEII GGTNACC 1 cut(s) 380
BstF5I GGATG 4 cut(s) 60, 142, 462, 647
BstFNI CGCG 2 cut(s) 346, 568
BstKTI GATC 8 cut(s) 328, 334, 401, 574, 711, 826, 835, 895
BstMAI GTCTC 1 cut(s) 4
BstMBI GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
BstMWI GCNNNNNNNGC 4 cut(s) 56, 96, 242, 526
BstNI CCWGG 3 cut(s) 522, 814, 966
BstPI GGTNACC 1 cut(s) 380
BstSCI CCNGG 4 cut(s) 307, 520, 812, 964
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 583
BstUI CGCG 2 cut(s) 346, 568
BstV1I GCAGC 2 cut(s) 772, 976
BstV2I GAAGAC 1 cut(s) 446
BstX2I RGATCY 4 cut(s) 331, 398, 832, 892
BstYI RGATCY 4 cut(s) 331, 398, 832, 892
BsuI GTATCC 1 cut(s) 670
BsuRI GGCC 6 cut(s) 59, 102, 152, 185, 520, 755
BtgI CCRYGG 3 cut(s) 566, 605, 941
BtsCI GGATG 4 cut(s) 60, 142, 462, 647
BtsIMutI CAGTG 5 cut(s) 236, 488, 550, 658, 1009
Cac8I GCNNGC 4 cut(s) 42, 477, 527, 531
CaiI CAGNNNCTG 1 cut(s) 971
Cfr10I RCCGGY 1 cut(s) 851
Cfr13I GGNCC 2 cut(s) 101, 810
Cfr42I CCGCGG 1 cut(s) 569
CsiI ACCWGGT 1 cut(s) 964
Csp6I GTAC 3 cut(s) 286, 460, 749
CspCI CAANNNNNGTGG 2 cut(s) 162, 197
CviAII CATG 8 cut(s) 45, 164, 209, 230, 606, 793, 942, 956
CviQI GTAC 3 cut(s) 286, 460, 749
DdeI CTNAG 4 cut(s) 131, 258, 336, 630
DpnI GATC 8 cut(s) 327, 333, 400, 573, 710, 825, 834, 894
DpnII GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
EaeI YGGCCR 2 cut(s) 183, 518
Eam1104I CTCTTC 3 cut(s) 344, 366, 1029
EarI CTCTTC 3 cut(s) 344, 366, 1029
Eco130I CCWWGG 2 cut(s) 605, 941
Eco47I GGWCC 1 cut(s) 810
Eco57I CTGAAG 1 cut(s) 857
Eco91I GGTNACC 1 cut(s) 380
EcoO109I RGGNCCY 1 cut(s) 810
EcoO65I GGTNACC 1 cut(s) 380
EcoRII CCWGG 3 cut(s) 520, 812, 964
EcoT14I CCWWGG 2 cut(s) 605, 941
ErhI CCWWGG 2 cut(s) 605, 941
FaeI CATG 8 cut(s) 48, 167, 212, 233, 609, 796, 945, 959
FalI AAGNNNNNCTT 2 cut(s) 882, 914
FaqI GGGAC 3 cut(s) 405, 823, 887
FatI CATG 8 cut(s) 44, 163, 208, 229, 605, 792, 941, 955
FauI CCCGC 1 cut(s) 561
Fnu4HI GCNGC 3 cut(s) 100, 761, 990
FokI GGATG 4 cut(s) 47, 149, 449, 634
Fsp4HI GCNGC 3 cut(s) 100, 761, 990
FspBI CTAG 3 cut(s) 120, 476, 830
GluI GCNGC 3 cut(s) 100, 761, 990
GsaI CCCAGC 2 cut(s) 99, 392
HaeIII GGCC 6 cut(s) 59, 102, 152, 185, 520, 755
HapII CCGG 2 cut(s) 308, 852
Hin1II CATG 8 cut(s) 48, 167, 212, 233, 609, 796, 945, 959
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HindIII AAGCTT 1 cut(s) 935
HinfI GANTC 3 cut(s) 12, 776, 946
HpaII CCGG 2 cut(s) 308, 852
HphI GGTGA 4 cut(s) 329, 392, 587, 896
Hpy166II GTNNAC 3 cut(s) 286, 434, 508
Hpy188I TCNGA 4 cut(s) 633, 733, 837, 1029
Hpy188III TCNNGA 5 cut(s) 120, 329, 445, 788, 830
Hpy8I GTNNAC 3 cut(s) 286, 434, 508
HpyAV CCTTC 2 cut(s) 794, 854
HpyCH4III ACNGT 1 cut(s) 253
HpyCH4IV ACGT 1 cut(s) 726
HpyCH4V TGCA 5 cut(s) 236, 245, 916, 929, 992
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 96, 242, 526
HpyF3I CTNAG 4 cut(s) 131, 258, 336, 630
HpySE526I ACGT 1 cut(s) 726
Hsp92II CATG 8 cut(s) 48, 167, 212, 233, 609, 796, 945, 959
KspI CCGCGG 1 cut(s) 569
Kzo9I GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
LguI GCTCTTC 1 cut(s) 366
LmnI GCTCC 3 cut(s) 95, 482, 502
Lsp1109I GCAGC 2 cut(s) 772, 976
LweI GCATC 2 cut(s) 125, 223
MabI ACCWGGT 1 cut(s) 964
MaeI CTAG 3 cut(s) 120, 476, 830
MaeII ACGT 1 cut(s) 726
MaeIII GTNAC 6 cut(s) 109, 253, 380, 668, 788, 960
MalI GATC 8 cut(s) 327, 333, 400, 573, 710, 825, 834, 894
MboI GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
MboII GAAGA 7 cut(s) 153, 284, 361, 383, 446, 850, 902
MflI RGATCY 4 cut(s) 331, 398, 832, 892
MhlI GDGCHC 1 cut(s) 583
MlsI TGGCCA 2 cut(s) 185, 520
MluCI AATT 4 cut(s) 404, 414, 770, 818
MluNI TGGCCA 2 cut(s) 185, 520
MlyI GAGTC 2 cut(s) 6, 785
MmeI TCCRAC 2 cut(s) 88, 781
MnlI CCTC 5 cut(s) 84, 126, 477, 573, 837
Mox20I TGGCCA 2 cut(s) 185, 520
MroXI GAANNNNTTC 1 cut(s) 936
MscI TGGCCA 2 cut(s) 185, 520
MseI TTAA 2 cut(s) 6, 1016
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 2 cut(s) 185, 520
MspA1I CMGCKG 4 cut(s) 99, 388, 568, 989
MspI CCGG 2 cut(s) 308, 852
MspR9I CCNGG 4 cut(s) 309, 522, 814, 966
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 3 cut(s) 522, 814, 966
MvnI CGCG 2 cut(s) 346, 568
MwoI GCNNNNNNNGC 4 cut(s) 56, 96, 242, 526
NciI CCSGG 1 cut(s) 309
NcoI CCATGG 2 cut(s) 605, 941
NdeII GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
NheI GCTAGC 1 cut(s) 475
NlaIII CATG 8 cut(s) 48, 167, 212, 233, 609, 796, 945, 959
NlaIV GGNNCC 3 cut(s) 91, 400, 811
NmuCI GTSAC 4 cut(s) 109, 253, 380, 788
PciSI GCTCTTC 1 cut(s) 366
PctI GAATGC 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 1 cut(s) 946
PflMI CCANNNNNTGG 2 cut(s) 703, 971
PkrI GCNGC 3 cut(s) 101, 762, 991
PleI GAGTC 2 cut(s) 6, 784
PpsI GAGTC 2 cut(s) 6, 784
PpuMI RGGWCCY 1 cut(s) 810
PsiI TTATAA 1 cut(s) 555
Psp1406I AACGTT 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 810
Psp6I CCWGG 3 cut(s) 520, 812, 964
PspEI GGTNACC 1 cut(s) 380
PspFI CCCAGC 2 cut(s) 95, 388
PspGI CCWGG 3 cut(s) 520, 812, 964
PspN4I GGNNCC 3 cut(s) 91, 400, 811
PspPI GGNCC 2 cut(s) 101, 810
PspPPI RGGWCCY 1 cut(s) 810
PstI CTGCAG 1 cut(s) 994
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 4 cut(s) 331, 398, 832, 892
PvuII CAGCTG 2 cut(s) 388, 989
RsaI GTAC 3 cut(s) 287, 461, 750
RsaNI GTAC 3 cut(s) 286, 460, 749
RseI CAYNNNNRTG 1 cut(s) 954
SacII CCGCGG 1 cut(s) 569
SapI GCTCTTC 1 cut(s) 366
SaqAI TTAA 2 cut(s) 6, 1016
SatI GCNGC 3 cut(s) 100, 761, 990
Sau3AI GATC 8 cut(s) 325, 331, 398, 571, 708, 823, 832, 892
Sau96I GGNCC 2 cut(s) 101, 810
SchI GAGTC 2 cut(s) 6, 785
ScrFI CCNGG 4 cut(s) 309, 522, 814, 966
SduI GDGCHC 1 cut(s) 583
SexAI ACCWGGT 1 cut(s) 964
SfaNI GCATC 2 cut(s) 125, 223
SfcI CTRYAG 1 cut(s) 990
Sfr303I CCGCGG 1 cut(s) 569
SgrBI CCGCGG 1 cut(s) 569
SinI GGWCC 1 cut(s) 810
SmiMI CAYNNNNRTG 1 cut(s) 954
Sse9I AATT 4 cut(s) 404, 414, 770, 818
SsiI CCGC 4 cut(s) 99, 346, 566, 568
SspI AATATT 1 cut(s) 685
SspMI CTAG 3 cut(s) 120, 476, 830
StyD4I CCNGG 4 cut(s) 307, 520, 812, 964
StyI CCWWGG 2 cut(s) 605, 941
TaaI ACNGT 1 cut(s) 253
TaiI ACGT 1 cut(s) 729
TaqI TCGA 2 cut(s) 586, 909
TasI AATT 4 cut(s) 404, 414, 770, 818
TatI WGTACW 1 cut(s) 285
TauI GCSGC 1 cut(s) 102
TfiI GAWTC 1 cut(s) 946
Tru1I TTAA 2 cut(s) 6, 1016
Tru9I TTAA 2 cut(s) 6, 1016
TscAI CASTG 5 cut(s) 243, 495, 550, 658, 1009
TseFI GTSAC 4 cut(s) 109, 253, 380, 788
TseI GCWGC 2 cut(s) 760, 989
Tsp45I GTSAC 4 cut(s) 109, 253, 380, 788
TspDTI ATGAA 3 cut(s) 197, 695, 903
TspGWI ACGGA 1 cut(s) 730
TspRI CASTG 5 cut(s) 243, 495, 550, 658, 1009
Van91I CCANNNNNTGG 2 cut(s) 703, 971
VpaK11BI GGWCC 1 cut(s) 810
XapI RAATTY 3 cut(s) 404, 770, 818
XbaI TCTAGA 2 cut(s) 119, 829
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 3 cut(s) 120, 476, 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.