MD07G1065000.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
6158514 .. 6161294
2781 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1065000.v1.1.491

Sequence Viewer

Length: 1020 bp
ATGTTTAAGAGGATCACATTCATCTTGTTGGTTGGATTGCTGGCGTGGGCATATCAGGCCACCCGACCACCACCTCCGAACATCTGTGGTTCGCCTGGCGGTCCACCCGTCACAGCGCCTAGAATAAGGCTAAGGGATGGAAGATTTTTGGCCTACAAGGAACATGGTGTTCCAAAACAATTGGCCAAGTACAAGATTATCTTTGTTCATCCCTTCTTTAGTTCCCGACATGATCCAATCATTGCAACAGCCGTCTCTCCGGAAGTTATTGAAGATTTAGGTGTGTACATTGTGTCTTTCGACAGACCAGGGTACGGTGAAAGTGATCCGGATCCTAAGCGAACAACGAAGAGCTTAGCGTTAGATATAGAGGAGCTTGGTGATCAGCTGGAACTCGGATCCAAATTTTATATGATTGGATACTCAATGGGAGGACAGGTCATCTGGAAGTGTCTTCAGTACATCCCTCATAGGCTAGCTGGAGCAGCACTGATCGCTCCGGTGATCAACTACTGGTGGCCAGGACTTCCTGCCAACCTGTCGTCTTATGCCTATAAGAAGCAAGCTCCACAGGATCAATGGGCGCTTCGAGCTGCCCACTATATACCTTGGTTAACCTACTGGTGGAACACTCAGAAATTCTTTCCTAAACACAGGGTTATGTTGTCCCGCCAAGATTGGGAAGCCATTAAGAATGCAAAGGTTTTTGGAAGAGAAAAGCACAAGGAACATGCCACACAGCAAGGAGAAGCTGAGTCCATCTTTCGCGACATGGTAGTTGGATTTGGGAGCTGGGAATTTGATCCTATGGATCTGCAGAACCCCTTTGCCAGCGACGAAGGCTCGGTCCATCTATGGCAGGGTGACGAAGATAAGCTTGTCCCAGTTGAGCTGCAACGCTATATTGCCGAAAAGCTTCCATGGATTCACTACCATGAGGTACCAGGTGGTGGACATTTGTTGCCAGCTCCAGATGGTATGAGTGAAGTCATCTTAAGGGCACTTCTAATTAAAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

340

Amino Acids

38.65

Weight (kDa)

7.21

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 66 - 321 1.3e-14 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 66 - 322 1.9e-14 Alpha/beta hydrolase family
Hydrolase_4 PF12146 93 - 320 3.3e-08 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 940
AccB1I GGYRCC 1 cut(s) 940
AccB7I CCANNNNNTGG 1 cut(s) 950
AccII CGCG 1 cut(s) 768
AccIII TCCGGA 2 cut(s) 259, 328
AciI CCGC 2 cut(s) 99, 670
AcoI YGGCCR 2 cut(s) 183, 518
AcsI RAATTY 3 cut(s) 404, 638, 797
AcuI CTGAAG 1 cut(s) 440
AfaI GTAC 5 cut(s) 191, 287, 314, 461, 942
AfiI CCNNNNNNNGG 4 cut(s) 314, 624, 679, 950
AflII CTTAAG 1 cut(s) 994
AgsI TTSAA 1 cut(s) 272
AjnI CCWGG 4 cut(s) 94, 307, 520, 943
Alw26I GTCTC 1 cut(s) 259
Aor13HI TCCGGA 2 cut(s) 259, 328
AoxI GGCC 4 cut(s) 57, 150, 183, 518
ApeKI GCWGC 3 cut(s) 485, 593, 892
ApoI RAATTY 3 cut(s) 404, 638, 797
ArsI GACNNNNNNTTYG 2 cut(s) 831, 863
Asp700I GAANNNNTTC 1 cut(s) 915
Asp718I GGTACC 1 cut(s) 940
AspLEI GCGC 2 cut(s) 118, 586
AspS9I GGNCC 2 cut(s) 101, 847
AsuHPI GGTGA 4 cut(s) 329, 392, 514, 875
AsuNHI GCTAGC 1 cut(s) 475
AvaII GGWCC 2 cut(s) 101, 847
BaeGI GKGCMC 1 cut(s) 1003
BalI TGGCCA 2 cut(s) 185, 520
BamHI GGATCC 2 cut(s) 331, 398
BanI GGYRCC 1 cut(s) 940
BbsI GAAGAC 1 cut(s) 446
BbvI GCAGC 3 cut(s) 497, 580, 879
BccI CCATC 4 cut(s) 131, 767, 858, 968
BceAI ACGGC 1 cut(s) 236
BciT130I CCWGG 4 cut(s) 96, 309, 522, 945
BciVI GTATCC 1 cut(s) 413
BclI TGATCA 2 cut(s) 382, 504
BcoDI GTCTC 1 cut(s) 259
BfaI CTAG 2 cut(s) 120, 476
BfmI CTRYAG 1 cut(s) 815
BfoI RGCGCY 2 cut(s) 119, 587
BfrI CTTAAG 1 cut(s) 994
BfuI GTATCC 1 cut(s) 413
BisI GCNGC 3 cut(s) 486, 594, 893
BlpI GCTNAGC 1 cut(s) 355
BlsI GCNGC 3 cut(s) 487, 595, 894
Bme1390I CCNGG 4 cut(s) 96, 309, 522, 945
Bme18I GGWCC 2 cut(s) 101, 847
BmgT120I GGNCC 2 cut(s) 101, 847
BmiI GGNNCC 3 cut(s) 333, 400, 942
BmrFI CCNGG 4 cut(s) 96, 309, 522, 945
BmrI ACTGGG 1 cut(s) 878
BmtI GCTAGC 1 cut(s) 479
BmuI ACTGGG 1 cut(s) 878
BpiI GAAGAC 1 cut(s) 446
BpmI CTGGAG 2 cut(s) 501, 954
Bpu10I CCTNAGC 2 cut(s) 131, 336
Bpu1102I GCTNAGC 1 cut(s) 355
BsaBI GATNNNNATC 1 cut(s) 330
BsaJI CCNNGG 3 cut(s) 308, 608, 920
BsaWI WCCGGW 3 cut(s) 259, 328, 499
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 624, 679, 950
Bse1I ACTGG 3 cut(s) 518, 626, 884
Bse3DI GCAATG 1 cut(s) 240
Bse8I GATNNNNATC 1 cut(s) 330
BseAI TCCGGA 2 cut(s) 259, 328
BseBI CCWGG 4 cut(s) 96, 309, 522, 945
BseDI CCNNGG 3 cut(s) 308, 608, 920
BseGI GGATG 3 cut(s) 142, 208, 462
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 4 cut(s) 314, 624, 679, 950
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 2 cut(s) 647, 744
BseNI ACTGG 3 cut(s) 518, 626, 884
BseRI GAGGAG 1 cut(s) 386
BseSI GKGCMC 1 cut(s) 1003
BseXI GCAGC 3 cut(s) 497, 580, 879
BseYI CCCAGC 1 cut(s) 792
Bsh1236I CGCG 1 cut(s) 768
BshFI GGCC 4 cut(s) 59, 152, 185, 520
BshNI GGYRCC 1 cut(s) 940
BsiSI CCGG 3 cut(s) 260, 329, 500
BslFI GGGAC 2 cut(s) 652, 866
BslI CCNNNNNNNGG 4 cut(s) 314, 624, 679, 950
BsmAI GTCTC 1 cut(s) 259
BsmBI CGTCTC 1 cut(s) 259
BsmFI GGGAC 2 cut(s) 652, 866
BsmI GAATGC 1 cut(s) 700
BsnI GGCC 4 cut(s) 59, 152, 185, 520
Bsp1286I GDGCHC 1 cut(s) 1003
Bsp13I TCCGGA 2 cut(s) 259, 328
Bsp1407I TGTACA 1 cut(s) 285
Bsp1720I GCTNAGC 1 cut(s) 355
Bsp19I CCATGG 1 cut(s) 920
Bsp68I TCGCGA 1 cut(s) 768
BspACI CCGC 2 cut(s) 99, 670
BspANI GGCC 4 cut(s) 59, 152, 185, 520
BspCNI CTCAG 2 cut(s) 646, 745
BspEI TCCGGA 2 cut(s) 259, 328
BspFNI CGCG 1 cut(s) 768
BspLI GGNNCC 3 cut(s) 333, 400, 942
BspMAI CTGCAG 1 cut(s) 819
BspOI GCTAGC 1 cut(s) 479
BspQI GCTCTTC 1 cut(s) 344
BspT107I GGYRCC 1 cut(s) 940
BspTI CTTAAG 1 cut(s) 994
BsrDI GCAATG 1 cut(s) 240
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 3 cut(s) 518, 626, 884
BssECI CCNNGG 3 cut(s) 308, 608, 920
BssT1I CCWWGG 2 cut(s) 608, 920
Bst2UI CCWGG 4 cut(s) 96, 309, 522, 945
Bst4CI ACNGT 1 cut(s) 317
Bst6I CTCTTC 2 cut(s) 344, 706
BstAFI CTTAAG 1 cut(s) 994
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 5 cut(s) 42, 477, 564, 832, 966
BstDEI CTNAG 5 cut(s) 131, 336, 355, 633, 753
BstDSI CCRYGG 1 cut(s) 920
BstF5I GGATG 3 cut(s) 142, 208, 462
BstFNI CGCG 1 cut(s) 768
BstH2I RGCGCY 2 cut(s) 119, 587
BstHHI GCGC 2 cut(s) 118, 586
BstMAI GTCTC 1 cut(s) 259
BstMWI GCNNNNNNNGC 5 cut(s) 56, 485, 494, 590, 840
BstNI CCWGG 4 cut(s) 96, 309, 522, 945
BstNSI RCATGY 1 cut(s) 734
BstSCI CCNGG 4 cut(s) 94, 307, 520, 943
BstSFI CTRYAG 1 cut(s) 815
BstSLI GKGCMC 1 cut(s) 1003
BstUI CGCG 1 cut(s) 768
BstV1I GCAGC 3 cut(s) 497, 580, 879
BstV2I GAAGAC 1 cut(s) 446
BstX2I RGATCY 3 cut(s) 331, 398, 811
BstYI RGATCY 3 cut(s) 331, 398, 811
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 4 cut(s) 59, 152, 185, 520
BtgI CCRYGG 1 cut(s) 920
BtsCI GGATG 3 cut(s) 142, 208, 462
BtsIMutI CAGTG 1 cut(s) 488
BtuMI TCGCGA 1 cut(s) 768
Cac8I GCNNGC 5 cut(s) 42, 477, 564, 832, 966
CfoI GCGC 2 cut(s) 118, 586
Cfr13I GGNCC 2 cut(s) 101, 847
CsiI ACCWGGT 1 cut(s) 943
Csp6I GTAC 5 cut(s) 190, 286, 313, 460, 941
CviAII CATG 6 cut(s) 164, 230, 731, 772, 921, 935
CviQI GTAC 5 cut(s) 190, 286, 313, 460, 941
DdeI CTNAG 5 cut(s) 131, 336, 355, 633, 753
EaeI YGGCCR 2 cut(s) 183, 518
Eam1104I CTCTTC 2 cut(s) 344, 706
EarI CTCTTC 2 cut(s) 344, 706
Eco130I CCWWGG 2 cut(s) 608, 920
Eco47I GGWCC 2 cut(s) 101, 847
Eco57I CTGAAG 1 cut(s) 440
EcoRII CCWGG 4 cut(s) 94, 307, 520, 943
EcoT14I CCWWGG 2 cut(s) 608, 920
ErhI CCWWGG 2 cut(s) 608, 920
Esp3I CGTCTC 1 cut(s) 259
FaeI CATG 6 cut(s) 167, 233, 734, 775, 924, 938
FalI AAGNNNNNCTT 4 cut(s) 185, 217, 861, 893
FaqI GGGAC 2 cut(s) 652, 866
FatI CATG 6 cut(s) 163, 229, 730, 771, 920, 934
FauI CCCGC 1 cut(s) 677
FbaI TGATCA 2 cut(s) 382, 504
Fnu4HI GCNGC 3 cut(s) 486, 594, 893
FokI GGATG 3 cut(s) 149, 195, 449
Fsp4HI GCNGC 3 cut(s) 486, 594, 893
FspBI CTAG 2 cut(s) 120, 476
GlaI GCGC 2 cut(s) 117, 585
GluI GCNGC 3 cut(s) 486, 594, 893
GsaI CCCAGC 1 cut(s) 796
GsuI CTGGAG 2 cut(s) 501, 954
HaeII RGCGCY 2 cut(s) 119, 587
HaeIII GGCC 4 cut(s) 59, 152, 185, 520
HapII CCGG 3 cut(s) 260, 329, 500
HhaI GCGC 2 cut(s) 118, 586
Hin1II CATG 6 cut(s) 167, 233, 734, 775, 924, 938
Hin6I GCGC 2 cut(s) 116, 584
HinP1I GCGC 2 cut(s) 116, 584
HincII GTYRAC 1 cut(s) 615
HindII GTYRAC 1 cut(s) 615
HindIII AAGCTT 2 cut(s) 875, 914
HinfI GANTC 2 cut(s) 755, 925
HpaI GTTAAC 1 cut(s) 615
HpaII CCGG 3 cut(s) 260, 329, 500
HphI GGTGA 4 cut(s) 329, 392, 514, 875
Hpy166II GTNNAC 4 cut(s) 104, 286, 615, 953
Hpy188I TCNGA 3 cut(s) 78, 398, 636
Hpy188III TCNNGA 6 cut(s) 225, 260, 329, 445, 767, 971
Hpy8I GTNNAC 4 cut(s) 104, 286, 615, 953
Hpy99I CGWCG 1 cut(s) 839
HpyAV CCTTC 2 cut(s) 223, 833
HpyCH4III ACNGT 1 cut(s) 317
HpyCH4V TGCA 4 cut(s) 245, 698, 817, 895
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 485, 494, 590, 840
HpyF3I CTNAG 5 cut(s) 131, 336, 355, 633, 753
Hsp92II CATG 6 cut(s) 167, 233, 734, 775, 924, 938
HspAI GCGC 2 cut(s) 116, 584
Kpn2I TCCGGA 2 cut(s) 259, 328
KpnI GGTACC 1 cut(s) 944
Ksp22I TGATCA 2 cut(s) 382, 504
KspAI GTTAAC 1 cut(s) 615
LguI GCTCTTC 1 cut(s) 344
LmnI GCTCC 6 cut(s) 373, 482, 502, 571, 789, 973
Lsp1109I GCAGC 3 cut(s) 497, 580, 879
MabI ACCWGGT 1 cut(s) 943
MaeI CTAG 2 cut(s) 120, 476
MaeIII GTNAC 2 cut(s) 109, 863
MboII GAAGA 6 cut(s) 153, 284, 361, 446, 723, 881
MfeI CAATTG 1 cut(s) 179
MflI RGATCY 3 cut(s) 331, 398, 811
MhlI GDGCHC 1 cut(s) 1003
MlsI TGGCCA 2 cut(s) 185, 520
MluCI AATT 5 cut(s) 179, 404, 638, 797, 1008
MluNI TGGCCA 2 cut(s) 185, 520
MlyI GAGTC 1 cut(s) 764
MmeI TCCRAC 2 cut(s) 13, 760
MnlI CCTC 6 cut(s) 3, 84, 364, 425, 477, 931
Mox20I TGGCCA 2 cut(s) 185, 520
MroI TCCGGA 2 cut(s) 259, 328
MroXI GAANNNNTTC 1 cut(s) 915
MscI TGGCCA 2 cut(s) 185, 520
MseI TTAA 5 cut(s) 6, 614, 690, 995, 1011
MslI CAYNNNNRTG 1 cut(s) 933
Msp20I TGGCCA 2 cut(s) 185, 520
MspA1I CMGCKG 1 cut(s) 388
MspCI CTTAAG 1 cut(s) 994
MspI CCGG 3 cut(s) 260, 329, 500
MspR9I CCNGG 4 cut(s) 96, 309, 522, 945
MunI CAATTG 1 cut(s) 179
Mva1269I GAATGC 1 cut(s) 700
MvaI CCWGG 4 cut(s) 96, 309, 522, 945
MvnI CGCG 1 cut(s) 768
MwoI GCNNNNNNNGC 5 cut(s) 56, 485, 494, 590, 840
NcoI CCATGG 1 cut(s) 920
NheI GCTAGC 1 cut(s) 475
NlaIII CATG 6 cut(s) 167, 233, 734, 775, 924, 938
NlaIV GGNNCC 3 cut(s) 333, 400, 942
NmuCI GTSAC 2 cut(s) 109, 863
NruI TCGCGA 1 cut(s) 768
NspI RCATGY 1 cut(s) 734
PciSI GCTCTTC 1 cut(s) 344
PctI GAATGC 1 cut(s) 700
PdmI GAANNNNTTC 1 cut(s) 915
PfeI GAWTC 1 cut(s) 925
PflMI CCANNNNNTGG 1 cut(s) 950
PkrI GCNGC 3 cut(s) 487, 595, 894
PleI GAGTC 1 cut(s) 763
PpsI GAGTC 1 cut(s) 763
Psp6I CCWGG 4 cut(s) 94, 307, 520, 943
PspFI CCCAGC 1 cut(s) 792
PspGI CCWGG 4 cut(s) 94, 307, 520, 943
PspN4I GGNNCC 3 cut(s) 333, 400, 942
PspPI GGNCC 2 cut(s) 101, 847
PstI CTGCAG 1 cut(s) 819
PsuI RGATCY 3 cut(s) 331, 398, 811
PvuII CAGCTG 1 cut(s) 388
RruI TCGCGA 1 cut(s) 768
RsaI GTAC 5 cut(s) 191, 287, 314, 461, 942
RsaNI GTAC 5 cut(s) 190, 286, 313, 460, 941
RseI CAYNNNNRTG 1 cut(s) 933
SapI GCTCTTC 1 cut(s) 344
SaqAI TTAA 5 cut(s) 6, 614, 690, 995, 1011
SatI GCNGC 3 cut(s) 486, 594, 893
Sau96I GGNCC 2 cut(s) 101, 847
SchI GAGTC 1 cut(s) 764
ScrFI CCNGG 4 cut(s) 96, 309, 522, 945
SduI GDGCHC 1 cut(s) 1003
SexAI ACCWGGT 1 cut(s) 943
SfcI CTRYAG 1 cut(s) 815
SinI GGWCC 2 cut(s) 101, 847
SmiMI CAYNNNNRTG 1 cut(s) 933
SmlI CTYRAG 1 cut(s) 994
SmoI CTYRAG 1 cut(s) 994
Sse9I AATT 5 cut(s) 179, 404, 638, 797, 1008
SsiI CCGC 2 cut(s) 99, 670
SspMI CTAG 2 cut(s) 120, 476
StyD4I CCNGG 4 cut(s) 94, 307, 520, 943
StyI CCWWGG 2 cut(s) 608, 920
TaaI ACNGT 1 cut(s) 317
TaqI TCGA 2 cut(s) 300, 589
TaqII GACCGA 1 cut(s) 835
TasI AATT 5 cut(s) 179, 404, 638, 797, 1008
TatI WGTACW 3 cut(s) 189, 285, 459
TfiI GAWTC 1 cut(s) 925
Tru1I TTAA 5 cut(s) 6, 614, 690, 995, 1011
Tru9I TTAA 5 cut(s) 6, 614, 690, 995, 1011
TscAI CASTG 1 cut(s) 495
TseFI GTSAC 2 cut(s) 109, 863
TseI GCWGC 3 cut(s) 485, 593, 892
Tsp45I GTSAC 2 cut(s) 109, 863
TspDTI ATGAA 2 cut(s) 10, 197
TspRI CASTG 1 cut(s) 495
Van91I CCANNNNNTGG 1 cut(s) 950
Vha464I CTTAAG 1 cut(s) 994
VpaK11BI GGWCC 2 cut(s) 101, 847
XapI RAATTY 3 cut(s) 404, 638, 797
XceI RCATGY 1 cut(s) 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 576
XmnI GAANNNNTTC 1 cut(s) 915
XspI CTAG 2 cut(s) 120, 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.