MD14G1021400.v1.1

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
2003415 .. 2010017
6603 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1021400.v1.1.491

Sequence Viewer

Length: 1128 bp
ATGGCGGGAGGAGTGAACAGGAAGATATCGGCCGCGTCGGCGAGAGCTCACACCCGAAGAGCCAAGCAAAACAGCTCCTTCCAGCTTCCGGCAGGGATTTATAAGACAGCACTTGTAGCGTTGTTTATTGGATTATCGGCATGGGCATACAAGGTGATCCAACCTCCTCCATCGAAGATATGTGGCTCTCCTGATGGGCCTCCGGTTACAGGACCAAGAATAAAACTTAGGGATGGAAGGCATTTGGCATACAAAGAGCATGGAGTCCCAAAAGATAATGCACAGCATAAAATAGTTTTTGTCCATGGTGTTGATAGTTGCAGGCATGACGCTGTCGTTGCTGAAACCATGTCTCCGGAAACTGTGAAAGACTTGGGGATCTACGTTGTGTCTTTTGACAGACCTGGTTATGGAGAAAGTGATCCTAATCCAAAGCGAACAGTGAAAAGCATGGCTTCAGATATAGAGGAACTGGCTGATCAATTAGGTTTAGGACACAGATTTTATGTAATTGGTTTCTCCATGGGCGGACAGGTGATTTGGAGCTGCCTCAAGTACATCCCTCACAGGATTGCCGGAGCAGTACTATTAGCGCCCGTGGTTAACTATTGGTGGACTGGTATTCCTGCAAATCTATCCAGTCAAGCTTACTCCCAACAGCTTCTGCAAGACCAATGGGCAGTTCGTGTGTCGCACTACACCCCTTGGCTTACCTACTTTTGGAACACTCAAAAATGGTTTCCCAGCTCAAGTGTTCTGGCTCAGAGTAGTGATTGTTTTTCTGACCAAGACAAAGAACTTATACCTACGATTCTTAAAGGACGACCACTTGCGGGACAGGTAAGACAGCAAGGAGAGTTTGAGACCGTTTACCGTGACATGAATGTTGGATTTGGGACCTGGGAATTCAGTCCTCTGGCACTGGAAAACCCATTCCCGAACAATGAAGCTTCTGTCCACGTGTGGCAAGGAGATGAAGATCGCATGGTACCTGTTTTACTACAACGCTACATTGCTGAACAGCTTCCTTGGATCCGTTATCATGAGATACCAGGTGCTGGACACTTGTTCCCACATGCTGATGGGATGTGCGAGACCATTGTCAAGGCACTTTTAGCTGACGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

376

Amino Acids

41.74

Weight (kDa)

7.72

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 94 - 210 1.6e-10 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 98 - 361 2.1e-19 Alpha/beta hydrolase family
Abhydrolase_1 PF00561 124 - 357 5.9e-16 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 102
Acc65I GGTACC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 988
AccB7I CCANNNNNTGG 1 cut(s) 1058
AccII CGCG 1 cut(s) 35
AccIII TCCGGA 1 cut(s) 355
AciI CCGC 4 cut(s) 5, 33, 528, 833
AclWI GGATC 5 cut(s) 151, 386, 416, 1027, 1040
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 1 cut(s) 905
AcuI CTGAAG 1 cut(s) 441
AcvI CACGTG 1 cut(s) 961
AfaI GTAC 3 cut(s) 557, 585, 990
AfiI CCNNNNNNNGG 6 cut(s) 88, 209, 410, 720, 833, 1058
AflIII ACRYGT 1 cut(s) 960
AjnI CCWGG 3 cut(s) 403, 899, 1051
AjuI GAANNNNNNNTTGG 2 cut(s) 666, 698
Alw21I GWGCWC 1 cut(s) 49
Alw26I GTCTC 3 cut(s) 357, 857, 1088
AlwI GGATC 5 cut(s) 151, 386, 416, 1027, 1040
AlwNI CAGNNNCTG 2 cut(s) 664, 1058
Aor13HI TCCGGA 1 cut(s) 355
AoxI GGCC 2 cut(s) 30, 197
ApeKI GCWGC 1 cut(s) 546
ApoI RAATTY 1 cut(s) 905
ArsI GACNNNNNNTTYG 2 cut(s) 522, 554
Asp700I GAANNNNTTC 1 cut(s) 1023
Asp718I GGTACC 1 cut(s) 988
AspLEI GCGC 1 cut(s) 595
AspS9I GGNCC 3 cut(s) 197, 212, 897
AsuHPI GGTGA 2 cut(s) 166, 547
AvaII GGWCC 2 cut(s) 212, 897
BamHI GGATCC 1 cut(s) 1032
BanI GGYRCC 1 cut(s) 988
BanII GRGCYC 1 cut(s) 49
BbrPI CACGTG 1 cut(s) 961
Bbv12I GWGCWC 1 cut(s) 49
BbvI GCAGC 1 cut(s) 533
BccI CCATC 4 cut(s) 178, 188, 227, 1076
BciT130I CCWGG 3 cut(s) 405, 901, 1053
BclI TGATCA 1 cut(s) 478
BcoDI GTCTC 3 cut(s) 357, 857, 1088
BfoI RGCGCY 1 cut(s) 596
BglI GCCNNNNNGGC 1 cut(s) 38
BisI GCNGC 2 cut(s) 33, 547
BlsI GCNGC 2 cut(s) 34, 548
BmcAI AGTACT 1 cut(s) 585
Bme1390I CCNGG 3 cut(s) 405, 901, 1053
Bme18I GGWCC 2 cut(s) 212, 897
BmgT120I GGNCC 3 cut(s) 197, 212, 897
BmiI GGNNCC 3 cut(s) 898, 990, 1034
BmrFI CCNGG 3 cut(s) 405, 901, 1053
BoxI GACNNNNGTC 1 cut(s) 1100
BpuEI CTTGAG 2 cut(s) 536, 733
BsaAI YACGTR 1 cut(s) 961
BsaBI GATNNNNATC 2 cut(s) 426, 978
BsaI GGTCTC 2 cut(s) 857, 1088
BsaJI CCNNGG 6 cut(s) 304, 522, 597, 704, 900, 1028
BsaWI WCCGGW 2 cut(s) 202, 355
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 209, 410, 720, 833, 1058
Bse1I ACTGG 4 cut(s) 477, 622, 639, 927
Bse3DI GCAATG 1 cut(s) 1011
Bse8I GATNNNNATC 2 cut(s) 426, 978
BseAI TCCGGA 1 cut(s) 355
BseBI CCWGG 3 cut(s) 405, 901, 1053
BseDI CCNNGG 6 cut(s) 304, 522, 597, 704, 900, 1028
BseGI GGATG 3 cut(s) 238, 558, 1092
BseJI GATNNNNATC 2 cut(s) 426, 978
BseLI CCNNNNNNNGG 6 cut(s) 88, 209, 410, 720, 833, 1058
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 1 cut(s) 776
BseNI ACTGG 4 cut(s) 477, 622, 639, 927
BseRI GAGGAG 2 cut(s) 24, 156
BseX3I CGGCCG 1 cut(s) 30
BseXI GCAGC 1 cut(s) 533
BseYI CCCAGC 1 cut(s) 743
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 2 cut(s) 32, 199
BshNI GGYRCC 1 cut(s) 988
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 49
BsiSI CCGG 4 cut(s) 89, 203, 356, 576
BslFI GGGAC 3 cut(s) 251, 849, 910
BslI CCNNNNNNNGG 6 cut(s) 88, 209, 410, 720, 833, 1058
BsmAI GTCTC 3 cut(s) 357, 857, 1088
BsmFI GGGAC 3 cut(s) 251, 849, 910
BsnI GGCC 2 cut(s) 32, 199
Bso31I GGTCTC 2 cut(s) 857, 1088
Bsp1286I GDGCHC 1 cut(s) 49
Bsp13I TCCGGA 1 cut(s) 355
Bsp143I GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
Bsp19I CCATGG 2 cut(s) 304, 522
BspACI CCGC 4 cut(s) 5, 33, 528, 833
BspANI GGCC 2 cut(s) 32, 199
BspCNI CTCAG 1 cut(s) 775
BspEI TCCGGA 1 cut(s) 355
BspFNI CGCG 1 cut(s) 35
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 3 cut(s) 898, 990, 1034
BspPI GGATC 5 cut(s) 151, 386, 416, 1027, 1040
BspQI GCTCTTC 1 cut(s) 52
BspT107I GGYRCC 1 cut(s) 988
BspTNI GGTCTC 2 cut(s) 857, 1088
BsrDI GCAATG 1 cut(s) 1011
BsrI ACTGG 4 cut(s) 477, 622, 639, 927
BssECI CCNNGG 6 cut(s) 304, 522, 597, 704, 900, 1028
BssMI GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
BssT1I CCWWGG 4 cut(s) 304, 522, 704, 1028
Bst2UI CCWGG 3 cut(s) 405, 901, 1053
Bst4CI ACNGT 4 cut(s) 364, 442, 868, 875
Bst6I CTCTTC 1 cut(s) 52
BstBAI YACGTR 1 cut(s) 961
BstC8I GCNNGC 1 cut(s) 323
BstDEI CTNAG 2 cut(s) 227, 762
BstDSI CCRYGG 3 cut(s) 304, 522, 597
BstF5I GGATG 3 cut(s) 238, 558, 1092
BstFNI CGCG 1 cut(s) 35
BstH2I RGCGCY 1 cut(s) 596
BstHHI GCGC 1 cut(s) 595
BstKTI GATC 6 cut(s) 159, 381, 424, 481, 982, 1035
BstMAI GTCTC 3 cut(s) 357, 857, 1088
BstMBI GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 4 cut(s) 38, 116, 338, 1115
BstNI CCWGG 3 cut(s) 405, 901, 1053
BstNSI RCATGY 1 cut(s) 1079
BstPAI GACNNNNGTC 1 cut(s) 1100
BstSCI CCNGG 3 cut(s) 403, 899, 1051
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 1 cut(s) 533
BstX2I RGATCY 2 cut(s) 378, 1032
BstYI RGATCY 2 cut(s) 378, 1032
BstZI CGGCCG 1 cut(s) 30
BsuRI GGCC 2 cut(s) 32, 199
BtgI CCRYGG 3 cut(s) 304, 522, 597
BtsCI GGATG 3 cut(s) 238, 558, 1092
BtsIMutI CAGTG 2 cut(s) 447, 920
Cac8I GCNNGC 1 cut(s) 323
CaiI CAGNNNCTG 2 cut(s) 664, 1058
CciI TCATGA 1 cut(s) 1042
CfoI GCGC 1 cut(s) 595
Cfr13I GGNCC 3 cut(s) 197, 212, 897
CseI GACGC 2 cut(s) 24, 338
CsiI ACCWGGT 2 cut(s) 403, 1051
Csp6I GTAC 3 cut(s) 556, 584, 989
CviQI GTAC 3 cut(s) 556, 584, 989
DdeI CTNAG 2 cut(s) 227, 762
DpnI GATC 6 cut(s) 158, 380, 423, 480, 981, 1034
DpnII GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
EaeI YGGCCR 1 cut(s) 30
EagI CGGCCG 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 52
EarI CTCTTC 1 cut(s) 52
EciI GGCGGA 1 cut(s) 543
Ecl136II GAGCTC 1 cut(s) 47
EclXI CGGCCG 1 cut(s) 30
Eco130I CCWWGG 4 cut(s) 304, 522, 704, 1028
Eco24I GRGCYC 1 cut(s) 49
Eco31I GGTCTC 2 cut(s) 857, 1088
Eco32I GATATC 1 cut(s) 27
Eco47I GGWCC 2 cut(s) 212, 897
Eco52I CGGCCG 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 441
Eco72I CACGTG 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 47
EcoO109I RGGNCCY 1 cut(s) 897
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 3 cut(s) 403, 899, 1051
EcoRV GATATC 1 cut(s) 27
EcoT14I CCWWGG 4 cut(s) 304, 522, 704, 1028
EcoT38I GRGCYC 1 cut(s) 49
ErhI CCWWGG 4 cut(s) 304, 522, 704, 1028
FalI AAGNNNNNCTT 2 cut(s) 439, 471
FaqI GGGAC 3 cut(s) 251, 849, 910
FauI CCCGC 1 cut(s) 826
FbaI TGATCA 1 cut(s) 478
Fnu4HI GCNGC 2 cut(s) 33, 547
FokI GGATG 3 cut(s) 245, 545, 1099
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 2 cut(s) 33, 547
GlaI GCGC 1 cut(s) 594
GluI GCNGC 2 cut(s) 33, 547
GsaI CCCAGC 1 cut(s) 747
HaeII RGCGCY 1 cut(s) 596
HaeIII GGCC 2 cut(s) 32, 199
HapII CCGG 4 cut(s) 89, 203, 356, 576
HgaI GACGC 2 cut(s) 24, 338
HhaI GCGC 1 cut(s) 595
Hin6I GCGC 1 cut(s) 593
HinP1I GCGC 1 cut(s) 593
HincII GTYRAC 1 cut(s) 604
HindII GTYRAC 1 cut(s) 604
HindIII AAGCTT 2 cut(s) 645, 948
HinfI GANTC 2 cut(s) 264, 811
HpaI GTTAAC 1 cut(s) 604
HpaII CCGG 4 cut(s) 89, 203, 356, 576
HphI GGTGA 2 cut(s) 166, 547
Hpy166II GTNNAC 5 cut(s) 16, 604, 615, 871, 958
Hpy188I TCNGA 3 cut(s) 460, 765, 784
Hpy188III TCNNGA 4 cut(s) 191, 356, 937, 1043
Hpy8I GTNNAC 5 cut(s) 16, 604, 615, 871, 958
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 2 cut(s) 88, 231
HpyCH4III ACNGT 4 cut(s) 364, 442, 868, 875
HpyCH4IV ACGT 2 cut(s) 384, 960
HpyCH4V TGCA 4 cut(s) 281, 321, 629, 667
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 116, 338, 1115
HpyF3I CTNAG 2 cut(s) 227, 762
HpySE526I ACGT 2 cut(s) 384, 960
HspAI GCGC 1 cut(s) 593
Kpn2I TCCGGA 1 cut(s) 355
KpnI GGTACC 1 cut(s) 992
Ksp22I TGATCA 1 cut(s) 478
KspAI GTTAAC 1 cut(s) 604
Kzo9I GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
LguI GCTCTTC 1 cut(s) 52
LmnI GCTCC 3 cut(s) 80, 543, 578
Lsp1109I GCAGC 1 cut(s) 533
MabI ACCWGGT 2 cut(s) 403, 1051
MaeII ACGT 2 cut(s) 384, 960
MaeIII GTNAC 2 cut(s) 205, 875
MalI GATC 6 cut(s) 158, 380, 423, 480, 981, 1034
MboI GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
MboII GAAGA 4 cut(s) 34, 69, 187, 989
MflI RGATCY 2 cut(s) 378, 1032
MhlI GDGCHC 1 cut(s) 49
MluCI AATT 3 cut(s) 482, 510, 905
MlyI GAGTC 1 cut(s) 273
MmeI TCCRAC 2 cut(s) 184, 868
MnlI CCTC 7 cut(s) 174, 177, 210, 460, 560, 573, 924
MroI TCCGGA 1 cut(s) 355
MroXI GAANNNNTTC 1 cut(s) 1023
MseI TTAA 2 cut(s) 603, 816
MslI CAYNNNNRTG 1 cut(s) 1080
MspI CCGG 4 cut(s) 89, 203, 356, 576
MspR9I CCNGG 3 cut(s) 405, 901, 1053
MvaI CCWGG 3 cut(s) 405, 901, 1053
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 4 cut(s) 38, 116, 338, 1115
NcoI CCATGG 2 cut(s) 304, 522
NdeII GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
NlaIV GGNNCC 3 cut(s) 898, 990, 1034
NmuCI GTSAC 1 cut(s) 875
NspI RCATGY 1 cut(s) 1079
PagI TCATGA 1 cut(s) 1042
PciSI GCTCTTC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 1 cut(s) 811
PflFI GACNNNGTC 1 cut(s) 332
PflMI CCANNNNNTGG 1 cut(s) 1058
PkrI GCNGC 2 cut(s) 34, 548
PleI GAGTC 1 cut(s) 272
PmaCI CACGTG 1 cut(s) 961
PmlI CACGTG 1 cut(s) 961
PpsI GAGTC 1 cut(s) 272
Ppu21I YACGTR 1 cut(s) 961
PpuMI RGGWCCY 1 cut(s) 897
PshAI GACNNNNGTC 1 cut(s) 1100
PsiI TTATAA 1 cut(s) 102
Psp124BI GAGCTC 1 cut(s) 49
Psp5II RGGWCCY 1 cut(s) 897
Psp6I CCWGG 3 cut(s) 403, 899, 1051
PspCI CACGTG 1 cut(s) 961
PspFI CCCAGC 1 cut(s) 743
PspGI CCWGG 3 cut(s) 403, 899, 1051
PspN4I GGNNCC 3 cut(s) 898, 990, 1034
PspPI GGNCC 3 cut(s) 197, 212, 897
PspPPI RGGWCCY 1 cut(s) 897
PstNI CAGNNNCTG 2 cut(s) 664, 1058
PsuI RGATCY 2 cut(s) 378, 1032
PsyI GACNNNGTC 1 cut(s) 332
RsaI GTAC 3 cut(s) 557, 585, 990
RsaNI GTAC 3 cut(s) 556, 584, 989
RseI CAYNNNNRTG 1 cut(s) 1080
SacI GAGCTC 1 cut(s) 49
SapI GCTCTTC 1 cut(s) 52
SaqAI TTAA 2 cut(s) 603, 816
SatI GCNGC 2 cut(s) 33, 547
Sau3AI GATC 6 cut(s) 156, 378, 421, 478, 979, 1032
Sau96I GGNCC 3 cut(s) 197, 212, 897
ScaI AGTACT 1 cut(s) 585
SchI GAGTC 1 cut(s) 273
ScrFI CCNGG 3 cut(s) 405, 901, 1053
SduI GDGCHC 1 cut(s) 49
SexAI ACCWGGT 2 cut(s) 403, 1051
SinI GGWCC 2 cut(s) 212, 897
SmiMI CAYNNNNRTG 1 cut(s) 1080
SmlI CTYRAG 2 cut(s) 551, 748
SmoI CTYRAG 2 cut(s) 551, 748
Sse9I AATT 3 cut(s) 482, 510, 905
SsiI CCGC 4 cut(s) 5, 33, 528, 833
SstI GAGCTC 1 cut(s) 49
StyD4I CCNGG 3 cut(s) 403, 899, 1051
StyI CCWWGG 4 cut(s) 304, 522, 704, 1028
TaaI ACNGT 4 cut(s) 364, 442, 868, 875
TaiI ACGT 2 cut(s) 387, 963
TaqI TCGA 1 cut(s) 173
TasI AATT 3 cut(s) 482, 510, 905
TatI WGTACW 2 cut(s) 555, 583
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 1 cut(s) 811
Tru1I TTAA 2 cut(s) 603, 816
Tru9I TTAA 2 cut(s) 603, 816
TscAI CASTG 2 cut(s) 447, 927
TseFI GTSAC 1 cut(s) 875
TseI GCWGC 1 cut(s) 546
Tsp45I GTSAC 1 cut(s) 875
TspDTI ATGAA 3 cut(s) 896, 960, 990
TspGWI ACGGA 1 cut(s) 1025
TspRI CASTG 2 cut(s) 447, 927
Tth111I GACNNNGTC 1 cut(s) 332
Van91I CCANNNNNTGG 1 cut(s) 1058
VpaK11BI GGWCC 2 cut(s) 212, 897
XapI RAATTY 1 cut(s) 905
XceI RCATGY 1 cut(s) 1079
XmnI GAANNNNTTC 1 cut(s) 1023
ZrmI AGTACT 1 cut(s) 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.