AT3G44340

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000554
Physical Location & Seq
Reverse (-)
16011547 .. 16020336
8790 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G44340.1

Sequence Viewer

Length: 3291 bp
ATGGCTGCTCCAGTGCCTCCAGGAGCATATAGACCTAATAACAATCAGCAAAACTCTGGTGGTCCTCCGAATTTTGTTCCTGGTTCACAAGGAAACCCCAATTCTTTAGCTGCTAATATGCAGAATTTGAACATTAATCGGCCACCTCCTCCTATGCCTGGTTCAGGTCCTAGACCATCTCCACCTTTTGGTCAGTCACCACAATCTTTTCCTCAACAACAACAACAACAACCAAGGCCTTCTCCAATGGCTAGACCTGGACCTCCTCCTCCTGCTGCTATGGCTAGACCAGGTGGACCTCCTCAGGTATCGCAACCTGGTGGTTTTCCGCCAGTTGGAAGACCCGTTGCTCCACCTTCTAATCAGCCACCGTTTGGTGGAAGACCATCTACAGGTCCGTTGGTTGGTGGTGGTTCGTCATTTCCTCAGCCTGGTGGTTTTCCAGCTTCAGGTCCACCAGGAGGTGTACCTTCTGGTCCTCCTTCAGGAGCACGTCCGATTGGTTTTGGTTCTCCTCCACCTATGGGACCTGGTATGTCCATGCCTCCTCCCTCTGGCATGCCTGGCGGTCCGTTGAGTAATGGGCCTCCTCCCTCTGGCATGCATGGCGGTCATTTGAGCAATGGGCCTCCTCCCTCTGGCATGCCTGGCGGTCCGTTGAGTAATGGACCTCCTCCTCCGATGATGGGTCCGGGGGCATTTCCCAGAGGATCACAATTCACAAGTGGTCCTATGATGGCTCCACCGCCACCATATGGACAGCCTCCTAATGCAGGCCCTTTTACGGGAAATTCACCATTATCTTCACCTCCTGCTCATTCAATACCCCCGCCGACAAATTTTCCTGGTGTCCCTTATGGCAGACCACCCATGCCAGGAGGCTTTCCTTATGGAGCACCACCACAACAGCTACCTTCTGCTCCTGGCACTCCTGGTTCAATCTATGGCATGGGTCCAATGCAAAATCAGTCAATGACCTCTGTTTCTAGCCCCTCAAAGATTGATCTTAATCAGATACCAAGGCCAGGTTCAAGCTCCAGTCCAATTGTGTATGAAACTCGTGTGGAAAATAAGGCTAATCCTCCACCACCTACTACTGTTGATTATATAACTAGAGACACTGGAAATTCCAGCCCGCGTTACATGCGATGCACAATCAATCAGATCCCATGCACTGTTGATCTTCTATCTACATCTGGTATGCAACTGGCACTAATAGTCCAACCAATGGCGCTTTCTCATCCATCTGAAGAGCCTATCCAAGTTGTGGACTTTGGTGAGAGTGGCCCTGTTAGATGTTCACGTTGTAAGGGCTACGTGAATCCTTTCATGAAGTTCATTGACCAAGGAAGGAAGTTCATATGTAACTTGTGTGGATACACTGATGAGACTCCTCGTGACTACCAGTGTAATCTCGGTCCAGATGGTAGACGTAGGGATGCTGATGAAAGGCCTGAGCTGTGTAGGGGAACTGTTGACTTTGTTGCTACAAAAGAATATATGGTACGAGATCCAATGCCAGCAGTATATTTCTTCCTCATTGATGTCTCAATGAACGCGATTCAAACAGGTGCAACTGCAGCTGCTTGCAGTGCAATCCAGCAAGTCCTCTCAGACCTTCCTGAAGGTCCTAGGACATTTGTTGGAATTGCCACGTTTGACTCAACAATTCACTTTTATAATTTGAAGCGTGCACTGCAGCAGCCATTGATGCTCATTGTTCCGGATGTTCAAGATGTGTATACACCTTTAGAAACAGATGTCATTGTTCAGCTATCTGAGTGCCGTCAACACCTAGAGATTTTGCTGGAAAGTATCCCAACAATGTTTCAGGAAAGTAAGAGTCCTGAATCTGCTTTTGGTGCAGCAGTTAAGGCCGCATTCTTAGCGATGAAGAGCACTGGAGGAAAGCTCATGGTGTTCCAATCAGTTTTGCCTTCTGTTGGCATTGGAGCACTTTCTTCTAGAGAAGCCGATGGGAGAGCTAATGCCTCTGCGGGTGAAAAAGAGGCCCATAAATTACTACAACCCGCAGACAAAACTTTAAGGACCATGGCTATTGAATTTGCTGAATACCAGGTCTGTGTAGATTTGTTTATCACAACTCAAGCGTATGTTGACATGGCTTCAATTTCTGAGATCCCAAGAACAACTGGAGGACAGGTTTATTGTTATTACCCTTTCTCAGCTCTTTCAGACCCCCCAAAGTTATACAACGATCTTAGATGGAATATCACGAGGCCCCAAGGTTTTGAGGCTGTCATGCGAGTCAGATGCAGTCAGGGTATTCAAGTGCAAGAATACTCAGGGAACTTCTGTAAGCGCATACCAACTGACATCGATCTACCTGCGATTGACTGTGACAAAGCTATAATGGTGACATTAAAGCATGATGACAAACTACAAGATGGAGCTGAATGCGGTTTTCAGTGTGCCCTTCTGTATACCACCATATCTGGAGAAAGGAGAATTAGGGTTCTTAACTTATCAATCCCTTGTACAAACATGCTCAGTAACTTGTTCCGCTCAGCTGACCTAGATTCCCAATTTGCTTGTATGCTGAAACAAGCGGCTAATGAGATCCCTTCGAAGGCACTTCCGTTGGTAAAGGAGCAAGCAACTAATGATTGCATCACCATACTACATTCCTATCGTAAATTCTGCGCTACAGTTACATCAACTGGACAACTTATTCTACCTGAAGCACTCAAGCTTTTGCCATTATATACTCTCGCCTTAACCAAAGGTGTGGGGTTACGAATGGACGGGAGAATTGATGACCGATCATTTTGGATAAACCATGTGTCTTCATTGTCCACTCCTTTGGCTATTCCGCTAGTTTATCCAAGGATGATTGCTGTCCATGACCTTGATGCAAATGATAATGAAGAAAATGTGGTTCCTTGTCCAATCCCATTACAAAGTGAACACCTTAGCGATGAGGGAGTCTATTTTCTTGAGAACGGTGAAGATGGTTTGATATATATTGGAGAATCAGTAAATTCAGATATCCTACAGAAGCTCTTTAATGTTCGCTCAGCTGCTGAACTTCCAAGTCAGTATGTGCTGCAAAAGTATGATAATCAGCTATCAAAGAAGTTCAATGACGTGGTGAATGAAATAAGGAGGCAAAGAAGTTCTTACCTACGCATTAAATTGTGCAAGAAAGGAGATCCAGCTGGAAATATGTTGTTCCAATCGTATATGGTAGAGGACAGGGGATCGGGTGGGGCTTCGTACGTGGATTTTCTCGTTTCAGTTCACCGTCAAATCCAACACAAACTGAACTGA

Protein Analysis

1096

Amino Acids

117.69

Weight (kDa)

6.91

Isoelectric Point (pI)

56.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 430 - 468 1.1e-15 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 505 - 745 3.3e-82 Sec23/Sec24 trunk domain
Sec23_BS PF08033 750 - 834 6.3e-26 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 845 - 944 8.2e-22 Sec23/Sec24 helical domain
Gelsolin PF00626 965 - 1032 9.4e-08 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1680
Acc36I ACCTGC 1 cut(s) 2356
AccB7I CCANNNNNTGG 5 cut(s) 188, 374, 755, 1228, 1267
AccBSI CCGCTC 1 cut(s) 2526
AccI GTMKAC 3 cut(s) 1429, 1742, 2444
AccII CGCG 2 cut(s) 1138, 1559
AccIII TCCGGA 1 cut(s) 1723
AclWI GGATC 7 cut(s) 718, 1159, 1505, 2134, 2575, 3167, 3229
AcoI YGGCCR 1 cut(s) 140
AcsI RAATTY 8 cut(s) 70, 124, 790, 838, 1126, 2063, 2657, 3001
AcuI CTGAAG 5 cut(s) 432, 468, 1269, 1644, 2721
AfaI GTAC 4 cut(s) 468, 1506, 2500, 3239
AjiI CACGTC 2 cut(s) 494, 3109
AjuI GAANNNNNNNTTGG 6 cut(s) 1012, 1044, 1219, 1251, 1842, 1874
Alw21I GWGCWC 5 cut(s) 493, 898, 1696, 1901, 1957
Alw26I GTCTC 3 cut(s) 1110, 1382, 1552
Alw44I GTGCAC 1 cut(s) 1692
AlwI GGATC 7 cut(s) 718, 1159, 1505, 2134, 2575, 3167, 3229
AlwNI CAGNNNCTG 1 cut(s) 3044
Aor13HI TCCGGA 1 cut(s) 1723
ApaLI GTGCAC 1 cut(s) 1692
ApoI RAATTY 8 cut(s) 70, 124, 790, 838, 1126, 2063, 2657, 3001
AseI ATTAAT 1 cut(s) 135
Asp700I GAANNNNTTC 1 cut(s) 1325
AspA2I CCTAGG 1 cut(s) 1631
AspLEI GCGC 3 cut(s) 1234, 2325, 2666
AsuC2I CCSGG 1 cut(s) 693
AsuII TTCGAA 1 cut(s) 2588
AvrII CCTAGG 1 cut(s) 1631
AxyI CCTNAGG 1 cut(s) 303
BaeGI GKGCMC 2 cut(s) 1696, 2437
BarI GAAGNNNNNNTAC 2 cut(s) 373, 405
BauI CACGAG 3 cut(s) 1059, 1395, 2236
BbsI GAAGAC 3 cut(s) 346, 388, 2799
Bbv12I GWGCWC 5 cut(s) 493, 898, 1696, 1901, 1957
BbvCI CCTCAGC 1 cut(s) 426
BbvI GCAGC 9 cut(s) 97, 262, 1570, 1592, 1711, 1714, 1877, 3028, 3054
BceAI ACGGC 1 cut(s) 1770
BcgI CGANNNNNNTGC 4 cut(s) 2256, 2290, 2330, 2364
BciVI GTATCC 2 cut(s) 1370, 1826
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 3 cut(s) 1110, 1382, 1552
BfmI CTRYAG 5 cut(s) 390, 1578, 1697, 2667, 3014
BfoI RGCGCY 1 cut(s) 1235
BfuAI ACCTGC 1 cut(s) 2356
BfuI GTATCC 2 cut(s) 1370, 1826
BlnI CCTAGG 1 cut(s) 1631
BlpI GCTNAGC 2 cut(s) 2527, 3037
BmgBI CACGTC 2 cut(s) 494, 3109
BmiI GGNNCC 6 cut(s) 528, 690, 741, 954, 2243, 2901
BmsI GCATC 6 cut(s) 1139, 1429, 1701, 2264, 2640, 2863
BpiI GAAGAC 3 cut(s) 346, 388, 2799
BplI GAGNNNNNCTC 2 cut(s) 1896, 1928
BpmI CTGGAG 4 cut(s) 1021, 1923, 2175, 2478
Bpu10I CCTNAGC 3 cut(s) 426, 1455, 2933
Bpu1102I GCTNAGC 2 cut(s) 2527, 3037
Bpu14I TTCGAA 1 cut(s) 2588
BpuEI CTTGAG 3 cut(s) 2091, 2693, 2978
BpuMI CCSGG 1 cut(s) 693
Bsa29I ATCGAT 1 cut(s) 2340
BsaAI YACGTR 2 cut(s) 1318, 3241
BsaBI GATNNNNATC 1 cut(s) 1008
BsaJI CCNNGG 8 cut(s) 233, 692, 1019, 1345, 1631, 2052, 2245, 2846
BsaWI WCCGGW 1 cut(s) 1723
BsaXI ACNNNNNCTCC 4 cut(s) 2148, 2178, 2982, 3012
Bse1I ACTGG 9 cut(s) 11, 332, 1038, 1126, 1212, 1405, 1906, 2158, 2686
Bse21I CCTNAGG 1 cut(s) 303
Bse3DI GCAATG 1 cut(s) 628
Bse8I GATNNNNATC 1 cut(s) 1008
BseAI TCCGGA 1 cut(s) 1723
BseCI ATCGAT 1 cut(s) 2340
BseDI CCNNGG 8 cut(s) 233, 692, 1019, 1345, 1631, 2052, 2245, 2846
BseGI GGATG 4 cut(s) 1240, 1444, 1732, 2856
BseJI GATNNNNATC 1 cut(s) 1008
BseMI GCAATG 1 cut(s) 628
BseNI ACTGG 9 cut(s) 11, 332, 1038, 1126, 1212, 1405, 1906, 2158, 2686
BseSI GKGCMC 2 cut(s) 1696, 2437
BseXI GCAGC 9 cut(s) 97, 262, 1570, 1592, 1711, 1714, 1877, 3028, 3054
BsgI GTGCAG 1 cut(s) 1884
Bsh1236I CGCG 2 cut(s) 1138, 1559
BshVI ATCGAT 1 cut(s) 2340
BsiHKAI GWGCWC 5 cut(s) 493, 898, 1696, 1901, 1957
BsiSI CCGG 2 cut(s) 692, 1724
BsiWI CGTACG 1 cut(s) 3237
BslFI GGGAC 2 cut(s) 540, 836
BsmAI GTCTC 3 cut(s) 1110, 1382, 1552
BsmFI GGGAC 2 cut(s) 540, 836
BsmI GAATGC 2 cut(s) 1880, 2423
Bsp119I TTCGAA 1 cut(s) 2588
Bsp1286I GDGCHC 6 cut(s) 493, 898, 1696, 1901, 1957, 2437
Bsp13I TCCGGA 1 cut(s) 1723
Bsp1407I TGTACA 1 cut(s) 2498
Bsp1720I GCTNAGC 2 cut(s) 2527, 3037
Bsp19I CCATGG 1 cut(s) 2052
BspDI ATCGAT 1 cut(s) 2340
BspEI TCCGGA 1 cut(s) 1723
BspFNI CGCG 2 cut(s) 1138, 1559
BspHI TCATGA 1 cut(s) 1329
BspLI GGNNCC 6 cut(s) 528, 690, 741, 954, 2243, 2901
BspMAI CTGCAG 2 cut(s) 1582, 1701
BspMI ACCTGC 1 cut(s) 2356
BspPI GGATC 7 cut(s) 718, 1159, 1505, 2134, 2575, 3167, 3229
BspQI GCTCTTC 2 cut(s) 1245, 1889
BspT104I TTCGAA 1 cut(s) 2588
BsrBI CCGCTC 1 cut(s) 2526
BsrDI GCAATG 1 cut(s) 628
BsrGI TGTACA 1 cut(s) 2498
BsrI ACTGG 9 cut(s) 11, 332, 1038, 1126, 1212, 1405, 1906, 2158, 2686
BssECI CCNNGG 8 cut(s) 233, 692, 1019, 1345, 1631, 2052, 2245, 2846
BssNAI GTATAC 2 cut(s) 1743, 2445
BssSI CACGAG 3 cut(s) 1059, 1395, 2236
BssT1I CCWWGG 7 cut(s) 233, 1019, 1345, 1631, 2052, 2245, 2846
Bst1107I GTATAC 2 cut(s) 1743, 2445
Bst2BI CACGAG 3 cut(s) 1059, 1395, 2236
Bst4CI ACNGT 8 cut(s) 372, 1099, 1177, 1474, 2360, 2671, 2966, 3266
Bst6I CTCTTC 2 cut(s) 1245, 1889
BstAUI TGTACA 1 cut(s) 2498
BstBAI YACGTR 2 cut(s) 1318, 3241
BstBI TTCGAA 1 cut(s) 2588
BstC8I GCNNGC 9 cut(s) 560, 602, 644, 775, 1136, 1521, 1588, 1692, 2616
BstDSI CCRYGG 1 cut(s) 2052
BstENI CCTNNNNNAGG 3 cut(s) 162, 483, 771
BstF5I GGATG 4 cut(s) 1240, 1444, 1732, 2856
BstFNI CGCG 2 cut(s) 1138, 1559
BstH2I RGCGCY 1 cut(s) 1235
BstHHI GCGC 3 cut(s) 1234, 2325, 2666
BstMAI GTCTC 3 cut(s) 1110, 1382, 1552
BstNSI RCATGY 5 cut(s) 562, 604, 646, 1147, 2509
BstSFI CTRYAG 5 cut(s) 390, 1578, 1697, 2667, 3014
BstSLI GKGCMC 2 cut(s) 1696, 2437
BstUI CGCG 2 cut(s) 1138, 1559
BstV1I GCAGC 9 cut(s) 97, 262, 1570, 1592, 1711, 1714, 1877, 3028, 3054
BstV2I GAAGAC 3 cut(s) 346, 388, 2799
BstX2I RGATCY 5 cut(s) 1164, 1510, 2139, 2580, 3172
BstXI CCANNNNNNTGG 2 cut(s) 2749, 2824
BstYI RGATCY 5 cut(s) 1164, 1510, 2139, 2580, 3172
BstZ17I GTATAC 2 cut(s) 1743, 2445
Bsu15I ATCGAT 1 cut(s) 2340
Bsu36I CCTNAGG 1 cut(s) 303
BsuI GTATCC 2 cut(s) 1370, 1826
BsuTUI ATCGAT 1 cut(s) 2340
BtgI CCRYGG 1 cut(s) 2052
BtgZI GCGATG 3 cut(s) 1162, 1904, 2952
BtrI CACGTC 2 cut(s) 494, 3109
BtsCI GGATG 4 cut(s) 1240, 1444, 1732, 2856
BtsI GCAGTG 2 cut(s) 1597, 1694
BtsIMutI CAGTG 9 cut(s) 18, 1119, 1173, 1380, 1412, 1597, 1694, 1899, 2435
BveI ACCTGC 1 cut(s) 2356
Cac8I GCNNGC 9 cut(s) 560, 602, 644, 775, 1136, 1521, 1588, 1692, 2616
CaiI CAGNNNCTG 1 cut(s) 3044
CciI TCATGA 1 cut(s) 1329
CfoI GCGC 3 cut(s) 1234, 2325, 2666
ClaI ATCGAT 1 cut(s) 2340
CpoI CGGWCCG 2 cut(s) 569, 653
CsiI ACCWGGT 4 cut(s) 289, 316, 529, 2076
Csp6I GTAC 4 cut(s) 467, 1505, 2499, 3238
CspI CGGWCCG 2 cut(s) 569, 653
CviQI GTAC 4 cut(s) 467, 1505, 2499, 3238
EaeI YGGCCR 1 cut(s) 140
Eam1104I CTCTTC 2 cut(s) 1245, 1889
EarI CTCTTC 2 cut(s) 1245, 1889
EciI GGCGGA 1 cut(s) 318
Eco130I CCWWGG 7 cut(s) 233, 1019, 1345, 1631, 2052, 2245, 2846
Eco147I AGGCCT 2 cut(s) 238, 1453
Eco32I GATATC 1 cut(s) 3010
Eco57I CTGAAG 5 cut(s) 432, 468, 1269, 1644, 2721
Eco81I CCTNAGG 1 cut(s) 303
EcoNI CCTNNNNNAGG 3 cut(s) 162, 483, 771
EcoO109I RGGNCCY 5 cut(s) 167, 527, 776, 1628, 2241
EcoRV GATATC 1 cut(s) 3010
EcoT14I CCWWGG 7 cut(s) 233, 1019, 1345, 1631, 2052, 2245, 2846
EcoT22I ATGCAT 1 cut(s) 606
ErhI CCWWGG 7 cut(s) 233, 1019, 1345, 1631, 2052, 2245, 2846
FalI AAGNNNNNCTT 2 cut(s) 3124, 3156
FaqI GGGAC 2 cut(s) 540, 836
FauI CCCGC 4 cut(s) 837, 1143, 1990, 2038
FauNDI CATATG 2 cut(s) 754, 1361
FblI GTMKAC 3 cut(s) 1429, 1742, 2444
FokI GGATG 4 cut(s) 1227, 1451, 1739, 2863
GlaI GCGC 3 cut(s) 1233, 2324, 2665
GsuI CTGGAG 4 cut(s) 1021, 1923, 2175, 2478
HaeII RGCGCY 1 cut(s) 1235
HapII CCGG 2 cut(s) 692, 1724
HhaI GCGC 3 cut(s) 1234, 2325, 2666
Hin6I GCGC 3 cut(s) 1232, 2323, 2664
HinP1I GCGC 3 cut(s) 1232, 2323, 2664
HincII GTYRAC 3 cut(s) 1477, 1790, 2119
HindII GTYRAC 3 cut(s) 1477, 1790, 2119
HindIII AAGCTT 1 cut(s) 2711
HpaII CCGG 2 cut(s) 692, 1724
HpyCH4III ACNGT 8 cut(s) 372, 1099, 1177, 1474, 2360, 2671, 2966, 3266
HpyCH4IV ACGT 7 cut(s) 493, 1303, 1317, 1432, 1655, 3108, 3240
HpySE526I ACGT 7 cut(s) 493, 1303, 1317, 1432, 1655, 3108, 3240
HspAI GCGC 3 cut(s) 1232, 2323, 2664
Kpn2I TCCGGA 1 cut(s) 1723
LguI GCTCTTC 2 cut(s) 1245, 1889
Lsp1109I GCAGC 9 cut(s) 97, 262, 1570, 1592, 1711, 1714, 1877, 3028, 3054
LweI GCATC 6 cut(s) 1139, 1429, 1701, 2264, 2640, 2863
MabI ACCWGGT 4 cut(s) 289, 316, 529, 2076
MaeII ACGT 7 cut(s) 493, 1303, 1317, 1432, 1655, 3108, 3240
MaeIII GTNAC 9 cut(s) 195, 1139, 1364, 1397, 2360, 2377, 2513, 2671, 2754
MbiI CCGCTC 1 cut(s) 2526
MfeI CAATTG 1 cut(s) 1044
MflI RGATCY 5 cut(s) 1164, 1510, 2139, 2580, 3172
MhlI GDGCHC 6 cut(s) 493, 898, 1696, 1901, 1957, 2437
MlyI GAGTC 5 cut(s) 1384, 1655, 1852, 2277, 2955
MmeI TCCRAC 3 cut(s) 316, 1246, 1624
Mph1103I ATGCAT 1 cut(s) 606
MroI TCCGGA 1 cut(s) 1723
MroXI GAANNNNTTC 1 cut(s) 1325
MseI TTAA 9 cut(s) 135, 1008, 1872, 2045, 2384, 2481, 2738, 3027, 3153
MspA1I CMGCKG 4 cut(s) 1583, 2531, 3041, 3179
MspI CCGG 2 cut(s) 692, 1724
MunI CAATTG 1 cut(s) 1044
Mva1269I GAATGC 2 cut(s) 1880, 2423
MvnI CGCG 2 cut(s) 1138, 1559
NciI CCSGG 1 cut(s) 693
NcoI CCATGG 1 cut(s) 2052
NdeI CATATG 2 cut(s) 754, 1361
NlaIV GGNNCC 6 cut(s) 528, 690, 741, 954, 2243, 2901
NmuCI GTSAC 4 cut(s) 195, 1397, 2360, 2377
NsiI ATGCAT 1 cut(s) 606
NspI RCATGY 5 cut(s) 562, 604, 646, 1147, 2509
NspV TTCGAA 1 cut(s) 2588
PaeI GCATGC 3 cut(s) 562, 604, 646
PagI TCATGA 1 cut(s) 1329
PceI AGGCCT 2 cut(s) 238, 1453
PciSI GCTCTTC 2 cut(s) 1245, 1889
PctI GAATGC 2 cut(s) 1880, 2423
PdmI GAANNNNTTC 1 cut(s) 1325
PfeI GAWTC 5 cut(s) 1321, 1561, 1850, 2540, 2993
Pfl23II CGTACG 1 cut(s) 3237
PflMI CCANNNNNTGG 5 cut(s) 188, 374, 755, 1228, 1267
PfoI TCCNGGA 1 cut(s) 19
PleI GAGTC 5 cut(s) 1384, 1655, 1851, 2276, 2954
PpsI GAGTC 5 cut(s) 1384, 1655, 1851, 2276, 2954
Ppu21I YACGTR 2 cut(s) 1318, 3241
PpuMI RGGWCCY 3 cut(s) 167, 527, 1628
PshBI ATTAAT 1 cut(s) 135
PsiI TTATAA 1 cut(s) 1680
Psp5II RGGWCCY 3 cut(s) 167, 527, 1628
PspLI CGTACG 1 cut(s) 3237
PspN4I GGNNCC 6 cut(s) 528, 690, 741, 954, 2243, 2901
PspPPI RGGWCCY 3 cut(s) 167, 527, 1628
PstI CTGCAG 2 cut(s) 1582, 1701
PstNI CAGNNNCTG 1 cut(s) 3044
PsuI RGATCY 5 cut(s) 1164, 1510, 2139, 2580, 3172
PvuII CAGCTG 4 cut(s) 1583, 2531, 3041, 3179
RsaI GTAC 4 cut(s) 468, 1506, 2500, 3239
RsaNI GTAC 4 cut(s) 467, 1505, 2499, 3238
Rsr2I CGGWCCG 2 cut(s) 569, 653
RsrII CGGWCCG 2 cut(s) 569, 653
SapI GCTCTTC 2 cut(s) 1245, 1889
SaqAI TTAA 9 cut(s) 135, 1008, 1872, 2045, 2384, 2481, 2738, 3027, 3153
SchI GAGTC 5 cut(s) 1384, 1655, 1852, 2277, 2955
SduI GDGCHC 6 cut(s) 493, 898, 1696, 1901, 1957, 2437
SexAI ACCWGGT 4 cut(s) 289, 316, 529, 2076
SfaNI GCATC 6 cut(s) 1139, 1429, 1701, 2264, 2640, 2863
SfcI CTRYAG 5 cut(s) 390, 1578, 1697, 2667, 3014
SfuI TTCGAA 1 cut(s) 2588
SmlI CTYRAG 3 cut(s) 2106, 2708, 2957
SmoI CTYRAG 3 cut(s) 2106, 2708, 2957
SphI GCATGC 3 cut(s) 562, 604, 646
SseBI AGGCCT 2 cut(s) 238, 1453
StuI AGGCCT 2 cut(s) 238, 1453
StyI CCWWGG 7 cut(s) 233, 1019, 1345, 1631, 2052, 2245, 2846
TaaI ACNGT 8 cut(s) 372, 1099, 1177, 1474, 2360, 2671, 2966, 3266
TaiI ACGT 7 cut(s) 496, 1306, 1320, 1435, 1658, 3111, 3243
TaqI TCGA 2 cut(s) 2340, 2588
TaqII GACCGA 2 cut(s) 1406, 2796
TatI WGTACW 1 cut(s) 2498
TauI GCSGC 2 cut(s) 1880, 2573
TfiI GAWTC 5 cut(s) 1321, 1561, 1850, 2540, 2993
Tru1I TTAA 9 cut(s) 135, 1008, 1872, 2045, 2384, 2481, 2738, 3027, 3153
Tru9I TTAA 9 cut(s) 135, 1008, 1872, 2045, 2384, 2481, 2738, 3027, 3153
TscAI CASTG 9 cut(s) 18, 1126, 1180, 1387, 1412, 1597, 1701, 1906, 2435
TseFI GTSAC 4 cut(s) 195, 1397, 2360, 2377
Tsp45I GTSAC 4 cut(s) 195, 1397, 2360, 2377
TspGWI ACGGA 4 cut(s) 387, 561, 645, 2589
TspRI CASTG 9 cut(s) 18, 1126, 1180, 1387, 1412, 1597, 1701, 1906, 2435
Van91I CCANNNNNTGG 5 cut(s) 188, 374, 755, 1228, 1267
VneI GTGCAC 1 cut(s) 1692
VspI ATTAAT 1 cut(s) 135
XagI CCTNNNNNAGG 3 cut(s) 162, 483, 771
XapI RAATTY 8 cut(s) 70, 124, 790, 838, 1126, 2063, 2657, 3001
XbaI TCTAGA 1 cut(s) 1964
XceI RCATGY 5 cut(s) 562, 604, 646, 1147, 2509
XmaJI CCTAGG 1 cut(s) 1631
XmiI GTMKAC 3 cut(s) 1429, 1742, 2444
XmnI GAANNNNTTC 1 cut(s) 1325
Zsp2I ATGCAT 1 cut(s) 606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.