FvH4_4g05490

Protein transport protein Sec24-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
4742993 .. 4759523
16531 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g05490.t6

Sequence Viewer

Length: 3342 bp
ATGGCAGCTTTTGTGCCTCCACCAGGGGCACCTAGGCCCAATAATAACAGTAACACCCCACCACCACCACCCCCAAATTACAATGCTCAGAGAAGCCCTGATTCGTTATCCGAAAACATGCACAATTTGAACCTTAATCGGCAGCAGCAGCCGCCTAACATGCCCAATTATGCTCCTAGACCATCCCCTTTCGGCCAACCTCCACCCTTCCCGGGTGCATCCGCACCTTATTCTCGCCCCGGCCCTCCCCCGGCCAGACCTGCAGCTCCTCCGCAAGCAACATTACCCCCTGGCACCACCGGAGTGAGACCTACTGGCCCACCTGCTGGTCAGTCTTCACTTTTTGGGTCTAGACCGCCTCCTGGTTCTTTCCCTCCTGGGGTGGCTCCTATTTCTCGGCCAGCTTCCAGTCCTTTTCAGACAACGGGGTTGCCAAGTGGTCCGGTTGCAACGCCTCCGGCTCCATCATCAGGTCCTCGCTCTGGTCCTGGGCCGTTTGCTAGTGGTCAGGCTGTGCCCCCAATGGGTGCTCCAGGGAGAATGAGTAATGGGCCACCGGCCTTTGGCTCCGGGGCTGTGCCAGGTGCACCTCGTTTTCCTCTAACTGGAAATTTACCTCAACCACCTGTTGGACCTCAACCACCAATGTCAGGGGCTCCTCGTACTCCAACCATGCATTCGGTGCTCGGTGGTCCGGCAGTCAGTGCCCCACCAGGATCTACTGCTCAACAAGCACCGCCATTTTCGTCGGGTCCTCAAGGCATGCGGCCTCCTCCTCCTGGTTCTCCTTATAGCCAACAGTCGTGGCTAATGCAACAAGGGCAGGTGGCTCCACCTACACAATTTCCTGGGGCTGCTCCACCCCCACAATTTCCTGGCTCTTCTCCACCTCCACAATTTCCTGGCTCTTCTCCACATCCACAGTTTCCTGGCTCTGCTCAACCACCTAGAATGTATGGAATGCCACCACAGCCACTTCCAAATCAGTCTATGACTACCATCTCATCTGCTGCCAATCAAACTGGAACTCCTGTGGGGTCATCAAAGATTGATCCCAATCAAATTCCTCGGCCTGGGCCAAGTTCTTCAGTACTTCTGCATGAAACTCGTCAGGCCAATCAAGCAAATCCTCCCCCGCCTGCTACAAGTGATTATATCGTCAGAGATAATGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCTGATCTTTTGACAACATCAGGGATGCCGTTAGCTTTGTTGGTTGAACCTTTTGCTCTTCCGCATCCATCTGAGGAACCAATTCAGGTTGTAGATTTTGGTGAAAGTGGTCCTGTTCGATGTTCACGTTGCAAAGGCTACATAAATCCTTTCATGAAGTTCATAGACCAGGGCAGGCAATTCATCTGCAACTTGTGTGGATTTACTGATGAGACCCCCCGTGACTACCACTGCAATCTAGGTCCAGATGGCAGACGTAGAGATGCTGATGATCGGCCGGAGCTATGTAGGGGAACAGTTGAATTTGTTGCCTCAAAAGAATACATGGTGCGCGATCCCATGCCAGCTGTGTACTTCTTCCTTATTGATGTATCCATGAATGCAGTACAAACTGGTGCAACTGCTGCAGCTTGCAGTGCAATCAATCAAGTTATTGCTGACCTTCCTGAAGGTCCTCGGACACTGGTGGGGATCGCTACATTTGACTCGACGATTCATTTTTACAATTTGAAACGTGCACTGCAGCAGCCTTTGATGCTTATTGTTCCTGATGTACAAGATGTTTACACTCCTCTAGAGACTGATGTGGTTGTTCAGCTTTCTGAGTGCCGTAAACATTTGGAGGAATTGCTGGAAAGTATTCCAACTATGTTTCAGACTAGTAAAACTGCTGAGTCAGCTTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATAAAGAGCACTGGAGGGAAACTGTTGGTGTTTCAGTCAGTGTTGCCATCAACTGGAATTGGAGCGCTTTCTGCTAGAGAGGCTGAAGGAAGAGCTAATATATCTTCAACTGAGAAGGAGCCCAATAAGTTACTCCAGCCTGTAGACAAAACTTTAAAGACAATGGCCATTGAATTTGCCGAATATCAGGTTTGCGTGGATTTATTTATCACTACCCAGTCATATATAGATATTGCTTCTATCTCAGTCATCCCCAGAACAACTGGAGGGCAGGTCTACTACTATTACCCCTTTTCAGCTGTCTCTGATCCTGCAAAGCTGTACAATGATCTTAGATGGAATGTCACAAGGCCTCAAGGTTTTGAGGCAGTGATGCGTGTAAGATGCAGCCAGGGCATTCAAGTTCAAGAGTACTTTGGAAACTTTTGCAAACGCATTCCAACAGATGTTGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTAATGTTAAAGCATGATGACAAATTACAGGATGGCTCAGAATGTTCTTTCCAGTGTGCTGTTTTATACACAACTGTGTATGGCCAACGGCGAATTCGGGTCACCACTTTGTCTCTGCCATGCACTAGCATGCTAAGTAATCTGTTTCGTGCTGCGGATTTGGACACTCAGTTTTCATGTTACATGAAGCAAGCGGCAAATGAAATTACTTCAAGTCCCCTTGTGCGTGTACGGGAACAAATGACAAATCTTTGCATCAGTAGTCTGTTTTCATATCGCAAATACTGTGCTACTGTGTCATCTTCGGGACAGCTTATTCTTCCAGAGGCACTGAAGCTCCTGCCCCTTTACACCCTTGCCTTAATCAAAAGTACAGGACTACGAACTGATGGAAAAATTGATGAGCGGTCTGTCTGGATCAACCATGTGTCCTCCCTTTCAGTACCTTTGGCAGTTCCACTGGTGTATCCCAGGATGGTGGCTGTCCATGACCTTGATGCTAAAAAGGAGGGTGATGAATCTCTTATTCCTCCGGTGATTCCACTTGCTAGTGAACATGTTAGTGATGATGGAATTTATCTTCTGGAGAATGGTGAGGACTGTTTAATATACGTTGGGAACTTGGTGGATTCTGGAATTTTACAACAGCTGTTTGGCGTCGGCACTGCTGATGCACTTCCTACTCAGTTTGTGCTGCAGCAGTATGATAATTCATTATCAAAGAAGCTGAACAATGTGGTAAATGAAATACGCCGCCAGAGATGTTCCTACCTGCGATTGAAATTGTGCAAGAAAGGAGATCCTTCAGGAGCATTCTTCTTGTCACATCTGGTTGAAGACCAGAGTCCCCATGGCCCCTCCTATGTTGAGTTTCTGGTACATGTCCATCGGCAAATACAGATAAAAATGTCTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling

Protein Analysis

1114

Amino Acids

119.8

Weight (kDa)

7.91

Isoelectric Point (pI)

57.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 446 - 484 1.8e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 521 - 761 7.3e-80 Sec23/Sec24 trunk domain
Sec23_BS PF08033 766 - 798 2.5e-06 Sec23/Sec24 beta-sandwich domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 331, 814
Acc36I ACCTGC 5 cut(s) 268, 331, 814, 2200, 3204
AccB1I GGYRCC 2 cut(s) 28, 293
AccB7I CCANNNNNTGG 3 cut(s) 326, 629, 1991
AccBSI CCGCTC 1 cut(s) 2830
AccI GTMKAC 2 cut(s) 2082, 2214
AccII CGCG 1 cut(s) 1557
AclWI GGATC 7 cut(s) 724, 1046, 1553, 1703, 2240, 2849, 3218
AcoI YGGCCR 6 cut(s) 193, 252, 398, 1499, 2103, 2506
AcsI RAATTY 7 cut(s) 610, 1062, 1526, 2111, 2517, 2997, 3060
AcuI CTGAAG 5 cut(s) 1071, 1692, 2043, 2777, 3213
AcyI GRCGYC 1 cut(s) 3081
AfeI AGCGCT 1 cut(s) 2004
AflIII ACRYGT 2 cut(s) 2980, 3304
AhlI ACTAGT 1 cut(s) 1883
AjuI GAANNNNNNNTTGG 4 cut(s) 661, 693, 2502, 2534
AleI CACNNNNGTG 2 cut(s) 302, 2498
Alw21I GWGCWC 6 cut(s) 532, 589, 687, 1202, 1744, 1949
Alw26I GTCTC 5 cut(s) 301, 1430, 1796, 2245, 2541
Alw44I GTGCAC 3 cut(s) 585, 1198, 1740
AlwI GGATC 7 cut(s) 724, 1046, 1553, 1703, 2240, 2849, 3218
Ama87I CYCGRG 1 cut(s) 211
Aor51HI AGCGCT 1 cut(s) 2004
ApaLI GTGCAC 3 cut(s) 585, 1198, 1740
ApoI RAATTY 7 cut(s) 610, 1062, 1526, 2111, 2517, 2997, 3060
Asp700I GAANNNNTTC 2 cut(s) 1305, 1863
AspA2I CCTAGG 1 cut(s) 32
AspLEI GCGC 2 cut(s) 1557, 2005
AsuC2I CCSGG 5 cut(s) 212, 213, 240, 251, 571
AsuHPI GGTGA 5 cut(s) 1337, 2518, 2948, 2971, 3029
AvaI CYCGRG 1 cut(s) 211
AvaII GGWCC 9 cut(s) 440, 473, 485, 632, 692, 752, 1334, 1466, 1676
AvrII CCTAGG 1 cut(s) 32
BaeGI GKGCMC 6 cut(s) 31, 519, 589, 709, 1202, 1744
BaeI ACNNNNGTAYC 2 cut(s) 2873, 2906
BalI TGGCCA 2 cut(s) 2105, 2508
BanI GGYRCC 2 cut(s) 28, 293
BanII GRGCYC 2 cut(s) 658, 2061
BbsI GAAGAC 3 cut(s) 327, 3267, 3327
Bbv12I GWGCWC 6 cut(s) 532, 589, 687, 1202, 1744, 1949
BceAI ACGGC 4 cut(s) 478, 1237, 1818, 2528
BcgI CGANNNNNNTGC 2 cut(s) 1088, 1122
BciVI GTATCC 2 cut(s) 1606, 2901
BcnI CCSGG 5 cut(s) 212, 213, 240, 251, 571
BcoDI GTCTC 5 cut(s) 301, 1430, 1796, 2245, 2541
BcuI ACTAGT 1 cut(s) 1883
BfmI CTRYAG 5 cut(s) 261, 1629, 1745, 2079, 3119
BfoI RGCGCY 1 cut(s) 2006
BfuAI ACCTGC 5 cut(s) 268, 331, 814, 2200, 3204
BfuI GTATCC 2 cut(s) 1606, 2901
BlnI CCTAGG 1 cut(s) 32
BmcAI AGTACT 2 cut(s) 1092, 2351
Bme18I GGWCC 9 cut(s) 440, 473, 485, 632, 692, 752, 1334, 1466, 1676
BmeT110I CYCGRG 1 cut(s) 211
BmrI ACTGGG 1 cut(s) 2149
BmuI ACTGGG 1 cut(s) 2149
BoxI GACNNNNGTC 1 cut(s) 3267
BpiI GAAGAC 3 cut(s) 327, 3267, 3327
BpmI CTGGAG 5 cut(s) 516, 1971, 2057, 2223, 3029
BpuEI CTTGAG 2 cut(s) 741, 2277
BpuMI CCSGG 5 cut(s) 212, 213, 240, 251, 571
BsaBI GATNNNNATC 1 cut(s) 1056
BsaHI GRCGYC 1 cut(s) 3081
BsaI GGTCTC 2 cut(s) 301, 1430
BsaWI WCCGGW 3 cut(s) 299, 442, 2956
BsaXI ACNNNNNCTCC 8 cut(s) 529, 559, 1012, 1042, 2196, 2226, 2745, 2775
Bse118I RCCGGY 1 cut(s) 556
Bse8I GATNNNNATC 1 cut(s) 1056
BseGI GGATG 8 cut(s) 182, 218, 916, 1254, 1288, 2187, 2461, 2904
BseJI GATNNNNATC 1 cut(s) 1056
BseMII CTCAG 9 cut(s) 101, 1287, 1818, 1887, 2040, 2196, 2475, 2606, 3122
BseRI GAGGAG 5 cut(s) 258, 648, 762, 765, 1785
BseSI GKGCMC 6 cut(s) 31, 519, 589, 709, 1202, 1744
BseX3I CGGCCG 1 cut(s) 1499
BsgI GTGCAG 1 cut(s) 1932
Bsh1236I CGCG 1 cut(s) 1557
Bsh1285I CGRYCG 1 cut(s) 1502
BshNI GGYRCC 2 cut(s) 28, 293
BsiEI CGRYCG 1 cut(s) 1502
BsiHKAI GWGCWC 6 cut(s) 532, 589, 687, 1202, 1744, 1949
BsiHKCI CYCGRG 1 cut(s) 211
BslFI GGGAC 3 cut(s) 2625, 2745, 3255
BsmAI GTCTC 5 cut(s) 301, 1430, 1796, 2245, 2541
BsmFI GGGAC 3 cut(s) 2625, 2745, 3255
BsmI GAATGC 6 cut(s) 676, 966, 1609, 2334, 2373, 3236
Bso31I GGTCTC 2 cut(s) 301, 1430
BsoBI CYCGRG 1 cut(s) 211
Bsp1407I TGTACA 2 cut(s) 1777, 2259
Bsp19I CCATGG 1 cut(s) 3274
BspCNI CTCAG 9 cut(s) 100, 1288, 1819, 1888, 2041, 2195, 2474, 2605, 3121
BspFNI CGCG 1 cut(s) 1557
BspHI TCATGA 1 cut(s) 1377
BspMAI CTGCAG 4 cut(s) 265, 1633, 1749, 3123
BspMI ACCTGC 5 cut(s) 268, 331, 814, 2200, 3204
BspPI GGATC 7 cut(s) 724, 1046, 1553, 1703, 2240, 2849, 3218
BspQI GCTCTTC 4 cut(s) 886, 913, 1287, 2023
BspT107I GGYRCC 2 cut(s) 28, 293
BspTNI GGTCTC 2 cut(s) 301, 1430
BsrBI CCGCTC 1 cut(s) 2830
BsrFI RCCGGY 1 cut(s) 556
BsrGI TGTACA 2 cut(s) 1777, 2259
BssAI RCCGGY 1 cut(s) 556
BssNI GRCGYC 1 cut(s) 3081
BssT1I CCWWGG 2 cut(s) 32, 3274
Bst6I CTCTTC 4 cut(s) 886, 913, 1287, 2023
BstACI GRCGYC 1 cut(s) 3081
BstAPI GCANNNNNTGC 3 cut(s) 682, 704, 1628
BstAUI TGTACA 2 cut(s) 1777, 2259
BstC8I GCNNGC 9 cut(s) 276, 402, 764, 1140, 1400, 1569, 1636, 2555, 2616
BstDSI CCRYGG 1 cut(s) 3274
BstEII GGTNACC 1 cut(s) 2524
BstENI CCTNNNNNAGG 1 cut(s) 21
BstF5I GGATG 8 cut(s) 182, 218, 916, 1254, 1288, 2187, 2461, 2904
BstFNI CGCG 1 cut(s) 1557
BstH2I RGCGCY 1 cut(s) 2006
BstHHI GCGC 2 cut(s) 1557, 2005
BstMAI GTCTC 5 cut(s) 301, 1430, 1796, 2245, 2541
BstMCI CGRYCG 1 cut(s) 1502
BstNSI RCATGY 6 cut(s) 121, 163, 766, 2557, 2984, 3308
BstPAI GACNNNNGTC 1 cut(s) 3267
BstPI GGTNACC 1 cut(s) 2524
BstSFI CTRYAG 5 cut(s) 261, 1629, 1745, 2079, 3119
BstSLI GKGCMC 6 cut(s) 31, 519, 589, 709, 1202, 1744
BstUI CGCG 1 cut(s) 1557
BstV2I GAAGAC 3 cut(s) 327, 3267, 3327
BstX2I RGATCY 2 cut(s) 716, 3223
BstXI CCANNNNNNTGG 1 cut(s) 2902
BstYI RGATCY 2 cut(s) 716, 3223
BstZI CGGCCG 1 cut(s) 1499
BsuI GTATCC 2 cut(s) 1606, 2901
BtgI CCRYGG 1 cut(s) 3274
BtsCI GGATG 8 cut(s) 182, 218, 916, 1254, 1288, 2187, 2461, 2904
BtsI GCAGTG 6 cut(s) 1221, 1453, 1645, 1742, 2313, 3087
BveI ACCTGC 5 cut(s) 268, 331, 814, 2200, 3204
Cac8I GCNNGC 9 cut(s) 276, 402, 764, 1140, 1400, 1569, 1636, 2555, 2616
CciI TCATGA 1 cut(s) 1377
CfoI GCGC 2 cut(s) 1557, 2005
Cfr10I RCCGGY 1 cut(s) 556
Cfr9I CCCGGG 1 cut(s) 211
CseI GACGC 1 cut(s) 3070
CspCI CAANNNNNGTGG 4 cut(s) 785, 820, 1402, 1437
DraI TTTAAA 1 cut(s) 2094
EaeI YGGCCR 6 cut(s) 193, 252, 398, 1499, 2103, 2506
EagI CGGCCG 1 cut(s) 1499
Eam1104I CTCTTC 4 cut(s) 886, 913, 1287, 2023
EarI CTCTTC 4 cut(s) 886, 913, 1287, 2023
EclXI CGGCCG 1 cut(s) 1499
Eco130I CCWWGG 2 cut(s) 32, 3274
Eco147I AGGCCT 1 cut(s) 2290
Eco24I GRGCYC 2 cut(s) 658, 2061
Eco31I GGTCTC 2 cut(s) 301, 1430
Eco47I GGWCC 9 cut(s) 440, 473, 485, 632, 692, 752, 1334, 1466, 1676
Eco47III AGCGCT 1 cut(s) 2004
Eco52I CGGCCG 1 cut(s) 1499
Eco57I CTGAAG 5 cut(s) 1071, 1692, 2043, 2777, 3213
Eco88I CYCGRG 1 cut(s) 211
Eco91I GGTNACC 1 cut(s) 2524
EcoNI CCTNNNNNAGG 1 cut(s) 21
EcoO109I RGGNCCY 3 cut(s) 473, 752, 1676
EcoO65I GGTNACC 1 cut(s) 2524
EcoRI GAATTC 1 cut(s) 2517
EcoT14I CCWWGG 2 cut(s) 32, 3274
EcoT22I ATGCAT 1 cut(s) 678
EcoT38I GRGCYC 2 cut(s) 658, 2061
ErhI CCWWGG 2 cut(s) 32, 3274
FaqI GGGAC 3 cut(s) 2625, 2745, 3255
FauI CCCGC 1 cut(s) 1143
FblI GTMKAC 2 cut(s) 2082, 2214
FokI GGATG 8 cut(s) 169, 205, 903, 1261, 1275, 2174, 2468, 2911
FriOI GRGCYC 2 cut(s) 658, 2061
GlaI GCGC 2 cut(s) 1556, 2004
GsuI CTGGAG 5 cut(s) 516, 1971, 2057, 2223, 3029
HaeII RGCGCY 1 cut(s) 2006
HgaI GACGC 1 cut(s) 3070
HhaI GCGC 2 cut(s) 1557, 2005
Hin1I GRCGYC 1 cut(s) 3081
Hin6I GCGC 2 cut(s) 1555, 2003
HinP1I GCGC 2 cut(s) 1555, 2003
HincII GTYRAC 1 cut(s) 2389
HindII GTYRAC 1 cut(s) 2389
HinfI GANTC 8 cut(s) 101, 1709, 1717, 1898, 2942, 2962, 3053, 3268
HphI GGTGA 5 cut(s) 1337, 2518, 2948, 2971, 3029
Hpy99I CGWCG 3 cut(s) 751, 1717, 3086
HpyAV CCTTC 6 cut(s) 217, 1667, 1676, 2018, 2047, 3237
HpyCH4IV ACGT 5 cut(s) 1186, 1351, 1480, 1738, 3036
HpySE526I ACGT 5 cut(s) 1186, 1351, 1480, 1738, 3036
Hsp92I GRCGYC 1 cut(s) 3081
HspAI GCGC 2 cut(s) 1555, 2003
LguI GCTCTTC 4 cut(s) 886, 913, 1287, 2023
MaeII ACGT 5 cut(s) 1186, 1351, 1480, 1738, 3036
MaeIII GTNAC 9 cut(s) 50, 1187, 1445, 2067, 2281, 2408, 2524, 2603, 3246
MbiI CCGCTC 1 cut(s) 2830
MflI RGATCY 2 cut(s) 716, 3223
MlsI TGGCCA 2 cut(s) 2105, 2508
MluNI TGGCCA 2 cut(s) 2105, 2508
MlyI GAGTC 3 cut(s) 1703, 1907, 3277
MmeI TCCRAC 4 cut(s) 610, 692, 1892, 2402
Mox20I TGGCCA 2 cut(s) 2105, 2508
Mph1103I ATGCAT 1 cut(s) 678
MroXI GAANNNNTTC 2 cut(s) 1305, 1863
MscI TGGCCA 2 cut(s) 2105, 2508
MseI TTAA 5 cut(s) 135, 2093, 2432, 2786, 3029
MslI CAYNNNNRTG 4 cut(s) 302, 2498, 2552, 2985
Msp20I TGGCCA 2 cut(s) 2105, 2508
MspA1I CMGCKG 3 cut(s) 1571, 2237, 3073
Mva1269I GAATGC 6 cut(s) 676, 966, 1609, 2334, 2373, 3236
MvnI CGCG 1 cut(s) 1557
NciI CCSGG 5 cut(s) 212, 213, 240, 251, 571
NcoI CCATGG 1 cut(s) 3274
NmeAIII GCCGAG 2 cut(s) 376, 1048
NmuCI GTSAC 5 cut(s) 1445, 2281, 2408, 2524, 3246
NsiI ATGCAT 1 cut(s) 678
NspI RCATGY 6 cut(s) 121, 163, 766, 2557, 2984, 3308
OliI CACNNNNGTG 2 cut(s) 302, 2498
PaeI GCATGC 2 cut(s) 766, 2557
PagI TCATGA 1 cut(s) 1377
PaqCI CACCTGC 2 cut(s) 331, 814
PceI AGGCCT 1 cut(s) 2290
PciI ACATGT 2 cut(s) 2980, 3304
PciSI GCTCTTC 4 cut(s) 886, 913, 1287, 2023
PcsI WCGNNNNNNNCGW 1 cut(s) 1348
PctI GAATGC 6 cut(s) 676, 966, 1609, 2334, 2373, 3236
PdmI GAANNNNTTC 2 cut(s) 1305, 1863
PfeI GAWTC 5 cut(s) 101, 1717, 2942, 2962, 3053
PflMI CCANNNNNTGG 3 cut(s) 326, 629, 1991
PleI GAGTC 3 cut(s) 1703, 1906, 3276
PpsI GAGTC 3 cut(s) 1703, 1906, 3276
PpuMI RGGWCCY 3 cut(s) 473, 752, 1676
PscI ACATGT 2 cut(s) 2980, 3304
PshAI GACNNNNGTC 1 cut(s) 3267
Psp5II RGGWCCY 3 cut(s) 473, 752, 1676
PspEI GGTNACC 1 cut(s) 2524
PspPPI RGGWCCY 3 cut(s) 473, 752, 1676
PstI CTGCAG 4 cut(s) 265, 1633, 1749, 3123
PsuI RGATCY 2 cut(s) 716, 3223
PvuII CAGCTG 3 cut(s) 1571, 2237, 3073
RseI CAYNNNNRTG 4 cut(s) 302, 2498, 2552, 2985
SapI GCTCTTC 4 cut(s) 886, 913, 1287, 2023
SaqAI TTAA 5 cut(s) 135, 2093, 2432, 2786, 3029
ScaI AGTACT 2 cut(s) 1092, 2351
SchI GAGTC 3 cut(s) 1703, 1907, 3277
SfcI CTRYAG 5 cut(s) 261, 1629, 1745, 2079, 3119
SinI GGWCC 9 cut(s) 440, 473, 485, 632, 692, 752, 1334, 1466, 1676
SmaI CCCGGG 1 cut(s) 213
SmiMI CAYNNNNRTG 4 cut(s) 302, 2498, 2552, 2985
SmlI CTYRAG 2 cut(s) 756, 2292
SmoI CTYRAG 2 cut(s) 756, 2292
SpeI ACTAGT 1 cut(s) 1883
SphI GCATGC 2 cut(s) 766, 2557
SseBI AGGCCT 1 cut(s) 2290
StuI AGGCCT 1 cut(s) 2290
StyI CCWWGG 2 cut(s) 32, 3274
TaiI ACGT 5 cut(s) 1189, 1354, 1483, 1741, 3039
TaqI TCGA 2 cut(s) 1342, 1712
TatI WGTACW 7 cut(s) 1090, 1575, 1609, 1777, 2259, 2349, 2795
TauI GCSGC 4 cut(s) 154, 769, 2621, 3180
TfiI GAWTC 5 cut(s) 101, 1717, 2942, 2962, 3053
Tru1I TTAA 5 cut(s) 135, 2093, 2432, 2786, 3029
Tru9I TTAA 5 cut(s) 135, 2093, 2432, 2786, 3029
TseFI GTSAC 5 cut(s) 1445, 2281, 2408, 2524, 3246
Tsp45I GTSAC 5 cut(s) 1445, 2281, 2408, 2524, 3246
TspMI CCCGGG 1 cut(s) 211
Van91I CCANNNNNTGG 3 cut(s) 326, 629, 1991
VneI GTGCAC 3 cut(s) 585, 1198, 1740
VpaK11BI GGWCC 9 cut(s) 440, 473, 485, 632, 692, 752, 1334, 1466, 1676
XagI CCTNNNNNAGG 1 cut(s) 21
XapI RAATTY 7 cut(s) 610, 1062, 1526, 2111, 2517, 2997, 3060
XbaI TCTAGA 2 cut(s) 350, 1798
XceI RCATGY 6 cut(s) 121, 163, 766, 2557, 2984, 3308
XcmI CCANNNNNNNNNTGG 1 cut(s) 3272
XmaI CCCGGG 1 cut(s) 211
XmaJI CCTAGG 1 cut(s) 32
XmiI GTMKAC 2 cut(s) 2082, 2214
XmnI GAANNNNTTC 2 cut(s) 1305, 1863
ZrmI AGTACT 2 cut(s) 1092, 2351
Zsp2I ATGCAT 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.