FvH4_4g36000

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000554
Physical Location & Seq
Reverse (-)
33102693 .. 33112004
9312 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36000.t17

Sequence Viewer

Length: 2379 bp
ATGTATGGAATGCCACCACCGATGCCAAATCAGTCTATGACTGCCATATCGCATGCTGTGGGTCAAACTGGAGCCCCTGTGGCAGGTCCATCGAAGATTGATCCTAATCAAATTCCGCGACCTGCTCCAGATTCCTCTGTGGTTCTGCATGAAACTCGCCAAGGCAATCAGGCCAACCCTCCTCCGCCTGCTACGAGCGATTACATTGTCAGAGACACTGGAAATTGCAGTCCACGTAATATGAGGTGCACTATCAATCAGATCCCATGCACTGCTGACCTCTTGACAACATCAGGGATGCAGTTGGCTTTGTTGGTCCAACCCTTGGGCCTTCCTCATCCTTCTGAAGAGCCCATACAAGTTGTGGATTTAGGTGAAACTGGTCCTCTTCGTTGTTCTCGTTGCAAAGGCTATATTAACCCTTTCATGAAGTTCATTGATCAGGGAAGGCAGTTCATCTGCAACTTGTGTGGATTCACTGATGAGACTCCCCGTGACTACCACTGCAATCTTGGTCCTGATGGTAGGCGTAGGGATGCTGATGATAGACCTGAGCTTTGTAGAGGAATGGTGGAATTTGTTGCTCCAAAAGAATACATGGTGCGTGATCCGATGCTGGCTATGTATTTCTTCCTTATTGACGTATCCATGAATGCCATACAAACTGGAGCAACTGCAGCCGCATGCTCTGCAATCAGTCAAGTTATTTCTGATCTTCCTGAAGGTCCTCGGACAAAGGTGGGAATTGCAACATTTGACTGTACAATTCATTTTTATAATTTGAAACGGGCATTACAGCAGCCATTGATGCTCATTGTTCCTGATATACAAGATGTTTATACTCCTCTGGAGACTGATGTTATTGTCCAGCTTTCTGAGTGCCGTCAGCATTTAGAGCTGCTGCTTGACAGCATCCCATCCATGTTTCAAGATAACAAAACAGCTGACTCAGCCTTTGGTGCCGCAGTGAAGGGTGCATTCTTGGCAATGAAAAGTAATGGAGGAAAACTTTTGGTATTTCAGTCAGTATTGCCATCTATTGGTACTGGAGCGCTTTCTGCTAGAGAGGCTGAAGGAAGAATTAATACTTCTGTTGGTGAAAAGGAGGCCCATAAGTTACTTCAACCAGCTGATAAGACTTTAGAATCAATGGCAATGGAACTTGCTGAGTATCAGGTCTGTGTAGATATTTTTATTACCACCCAAACTTACATGGACATAGCCTCTATCTCTGTCATGCCAAGAATTACTGGTGGACAGATCTATTATTATTATCCTTTCTCTGCTGTTACCGACAATGCAAAGATCTACAATGATCTTAGATGGAATATTACAAGGCCTCTAGGTTTTGAGGCAGTGATGCGTGTGCGATGCAGCCAGGGTCTCCAAGTTAACGAGTACCGCGGGAACTTCTGCAAGCGCATTCCTACAGACGTTGACCTACCTGGGATTGACTCTGATAAAACTATAATGGTAACCATAAAATATGATGACAAATTGCAGGACGGCTCAGAATGTGTGTTTCAGTGTGCGCTTCTGTACACTACCGTGTATGGCCAAAGAAGGATTCGAGTTTTAACTCTTGCCCTACCATGCACAAGTATGCTAAATAATCTTTTCCGAACAGCTGATTTGGATACTCAGTTTGCTTGTATCTTGAAGCAAGCGGCTAATGAAATCCCTTCTAGCTCACTCCTGCAAGTCCGTGAACGACTGACTGACCGTTGCATCAGTATTCTCTGTTCTTATCGTAAATTTTGTGCTACAGTAACATCAAGTGGACAGCTTATTCTTCCAGAAACACTGAAGCTTCTACCTTTATACATCCTTGCTTTAACAAAAAGTACAGGATTGCGAACTTCTGGGAAAATAGATGAACGATCTTATTGGATCAACTACGTGTCCTCTGTTTCCACTGCTTTAGCAATAGCACTTGTTTATCCACGGATGCTGGCAATCCACAACCTCAATTGTAAGGATGATGCGTCTCTCTGTCCTCCTGCAATTCCACTATCTAGTGAGCATATCAGTGATGAGGGAATTTATCTACTCGAGAATGGAGAGGATTGTCTAATTTATGTAGGGAACTCAGTTGATTCAGATATCTTGAACAAGCTGTTTGGAGTTCCCTCGATTGATGAAATTCCAACTCAGTTTGTCCTGCAGCAGCTTGACAATCCATTGTCAAAGAGACTAAATGATTTAATAAATGAGATACGACGCCAAAGATGTTCCTACCTTCGCTTGAAGTTATGCAAGAAAGGAGAACCATCAGGGATGCTTTTCTTCTCTTATATCGTAGAAGACAAGAGCTTGAATGGCCTCTCATATGTTGAGTTCCTAATACATATCCATCGGCAAATTCAAATGAAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

793

Amino Acids

88.02

Weight (kDa)

5.79

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 129 - 167 2.8e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 204 - 444 4.9e-76 Sec23/Sec24 trunk domain
Sec23_BS PF08033 449 - 533 1e-26 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 544 - 642 1.4e-26 Sec23/Sec24 helical domain
Gelsolin PF00626 666 - 734 1.1e-08 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
Acc36I ACCTGC 2 cut(s) 74, 130
AccB1I GGYRCC 1 cut(s) 959
AccB7I CCANNNNNTGG 2 cut(s) 325, 1040
AccII CGCG 2 cut(s) 118, 1404
AciI CCGC 7 cut(s) 116, 185, 681, 963, 1402, 1404, 1667
AclWI GGATC 4 cut(s) 95, 256, 602, 1898
AcoI YGGCCR 1 cut(s) 1555
AcsI RAATTY 6 cut(s) 111, 575, 1754, 2040, 2142, 2361
AcuI CTGAAG 4 cut(s) 366, 741, 1092, 1826
AcyI GRCGYC 1 cut(s) 2221
AfaI GTAC 5 cut(s) 763, 1045, 1400, 1541, 1846
AfeI AGCGCT 1 cut(s) 1053
AfiI CCNNNNNNNGG 3 cut(s) 83, 325, 1040
AflIII ACRYGT 1 cut(s) 1899
AgsI TTSAA 8 cut(s) 784, 929, 1124, 1660, 2110, 2248, 2317, 2366
AjnI CCWGG 2 cut(s) 1377, 1444
AjuI GAANNNNNNNTTGG 2 cut(s) 1551, 1583
AleI CACNNNNGTG 1 cut(s) 1547
Alw21I GWGCWC 1 cut(s) 251
Alw26I GTCTC 6 cut(s) 207, 479, 845, 1388, 1992, 2185
Alw44I GTGCAC 1 cut(s) 247
AlwI GGATC 4 cut(s) 95, 256, 602, 1898
Ama87I CYCGRG 1 cut(s) 2051
Aor51HI AGCGCT 1 cut(s) 1053
AoxI GGCC 6 cut(s) 171, 328, 1107, 1337, 1555, 2320
ApaLI GTGCAC 1 cut(s) 247
ApeKI GCWGC 7 cut(s) 677, 799, 898, 901, 1374, 2164, 2167
ApoI RAATTY 6 cut(s) 111, 575, 1754, 2040, 2142, 2361
ArsI GACNNNNNNTTYG 4 cut(s) 540, 572, 938, 970
AseI ATTAAT 1 cut(s) 1083
AspLEI GCGC 3 cut(s) 1054, 1422, 1534
AspS9I GGNCC 7 cut(s) 86, 316, 328, 383, 515, 725, 1108
AsuHPI GGTGA 2 cut(s) 386, 1109
AvaI CYCGRG 1 cut(s) 2051
AvaII GGWCC 5 cut(s) 86, 316, 383, 515, 725
BaeGI GKGCMC 1 cut(s) 251
BalI TGGCCA 1 cut(s) 1557
BanI GGYRCC 1 cut(s) 959
BanII GRGCYC 2 cut(s) 76, 354
BarI GAAGNNNNNNTAC 4 cut(s) 339, 371, 1069, 1101
BbsI GAAGAC 1 cut(s) 2310
Bbv12I GWGCWC 1 cut(s) 251
BbvI GCAGC 7 cut(s) 689, 811, 885, 888, 1386, 2176, 2179
BccI CCATC 7 cut(s) 97, 515, 925, 1042, 1317, 2278, 2361
BceAI ACGGC 2 cut(s) 867, 1522
BcgI CGANNNNNNTGC 4 cut(s) 72, 106, 137, 171
BciT130I CCWGG 2 cut(s) 1379, 1446
BciVI GTATCC 2 cut(s) 655, 1630
BclI TGATCA 1 cut(s) 439
BcoDI GTCTC 6 cut(s) 207, 479, 845, 1388, 1992, 2185
BfaI CTAG 4 cut(s) 1062, 1343, 1686, 2016
BfmI CTRYAG 4 cut(s) 675, 1428, 1764, 2162
BfoI RGCGCY 1 cut(s) 1055
BfuAI ACCTGC 2 cut(s) 74, 130
BfuI GTATCC 2 cut(s) 655, 1630
BglI GCCNNNNNGGC 1 cut(s) 80
BglII AGATCT 2 cut(s) 1260, 1305
Bme1390I CCNGG 2 cut(s) 1379, 1446
Bme18I GGWCC 5 cut(s) 86, 316, 383, 515, 725
BmeT110I CYCGRG 1 cut(s) 2051
BmgT120I GGNCC 7 cut(s) 86, 316, 328, 383, 515, 725, 1108
BmiI GGNNCC 2 cut(s) 73, 961
BmrFI CCNGG 2 cut(s) 1379, 1446
BpiI GAAGAC 1 cut(s) 2310
BpmI CTGGAG 5 cut(s) 90, 111, 687, 869, 1068
Bpu10I CCTNAGC 1 cut(s) 552
BsaAI YACGTR 2 cut(s) 236, 1900
BsaBI GATNNNNATC 1 cut(s) 105
BsaHI GRCGYC 1 cut(s) 2221
BsaI GGTCTC 1 cut(s) 1388
BsaJI CCNNGG 7 cut(s) 160, 324, 728, 1378, 1402, 1445, 1943
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 3 cut(s) 83, 325, 1040
Bse1I ACTGG 6 cut(s) 73, 223, 385, 670, 1051, 1255
Bse3DI GCAATG 2 cut(s) 993, 1161
Bse8I GATNNNNATC 1 cut(s) 105
BseBI CCWGG 2 cut(s) 1379, 1446
BseDI CCNNGG 7 cut(s) 160, 324, 728, 1378, 1402, 1445, 1943
BseGI GGATG 9 cut(s) 303, 337, 541, 912, 917, 1824, 1953, 1984, 2283
BseJI GATNNNNATC 1 cut(s) 105
BseLI CCNNNNNNNGG 3 cut(s) 83, 325, 1040
BseMI GCAATG 2 cut(s) 993, 1161
BseMII CTCAG 8 cut(s) 543, 867, 963, 1158, 1524, 1655, 2103, 2165
BseNI ACTGG 6 cut(s) 73, 223, 385, 670, 1051, 1255
BseRI GAGGAG 2 cut(s) 171, 834
BseSI GKGCMC 1 cut(s) 251
BseXI GCAGC 7 cut(s) 689, 811, 885, 888, 1386, 2176, 2179
Bsh1236I CGCG 2 cut(s) 118, 1404
BshFI GGCC 6 cut(s) 173, 330, 1109, 1339, 1557, 2322
BshNI GGYRCC 1 cut(s) 959
BsiHKAI GWGCWC 1 cut(s) 251
BsiHKCI CYCGRG 1 cut(s) 2051
BslI CCNNNNNNNGG 3 cut(s) 83, 325, 1040
BsmAI GTCTC 6 cut(s) 207, 479, 845, 1388, 1992, 2185
BsmBI CGTCTC 1 cut(s) 1992
BsmI GAATGC 4 cut(s) 15, 658, 977, 1422
BsnI GGCC 6 cut(s) 173, 330, 1109, 1339, 1557, 2322
Bso31I GGTCTC 1 cut(s) 1388
BsoBI CYCGRG 1 cut(s) 2051
Bsp1286I GDGCHC 3 cut(s) 76, 251, 354
Bsp1407I TGTACA 2 cut(s) 761, 1539
BspACI CCGC 7 cut(s) 116, 185, 681, 963, 1402, 1404, 1667
BspANI GGCC 6 cut(s) 173, 330, 1109, 1339, 1557, 2322
BspCNI CTCAG 8 cut(s) 544, 868, 962, 1159, 1523, 1654, 2102, 2164
BspFNI CGCG 2 cut(s) 118, 1404
BspHI TCATGA 1 cut(s) 426
BspLI GGNNCC 2 cut(s) 73, 961
BspMAI CTGCAG 2 cut(s) 679, 2166
BspMI ACCTGC 2 cut(s) 74, 130
BspPI GGATC 4 cut(s) 95, 256, 602, 1898
BspQI GCTCTTC 1 cut(s) 342
BspT107I GGYRCC 1 cut(s) 959
BspTNI GGTCTC 1 cut(s) 1388
BsrDI GCAATG 2 cut(s) 993, 1161
BsrGI TGTACA 2 cut(s) 761, 1539
BsrI ACTGG 6 cut(s) 73, 223, 385, 670, 1051, 1255
BssECI CCNNGG 7 cut(s) 160, 324, 728, 1378, 1402, 1445, 1943
BssNI GRCGYC 1 cut(s) 2221
BssT1I CCWWGG 2 cut(s) 160, 324
Bst2UI CCWGG 2 cut(s) 1379, 1446
Bst4CI ACNGT 4 cut(s) 761, 1549, 1724, 1768
Bst6I CTCTTC 2 cut(s) 342, 393
BstACI GRCGYC 1 cut(s) 2221
BstAPI GCANNNNNTGC 1 cut(s) 689
BstAUI TGTACA 2 cut(s) 761, 1539
BstBAI YACGTR 2 cut(s) 236, 1900
BstC8I GCNNGC 7 cut(s) 54, 189, 618, 685, 1418, 1665, 1953
BstDEI CTNAG 9 cut(s) 552, 876, 949, 1167, 1319, 1510, 1641, 2089, 2151
BstDSI CCRYGG 2 cut(s) 1402, 1943
BstEII GGTNACC 1 cut(s) 1474
BstENI CCTNNNNNAGG 1 cut(s) 81
BstF5I GGATG 9 cut(s) 303, 337, 541, 912, 917, 1824, 1953, 1984, 2283
BstFNI CGCG 2 cut(s) 118, 1404
BstH2I RGCGCY 1 cut(s) 1055
BstHHI GCGC 3 cut(s) 1054, 1422, 1534
BstMAI GTCTC 6 cut(s) 207, 479, 845, 1388, 1992, 2185
BstNI CCWGG 2 cut(s) 1379, 1446
BstNSI RCATGY 2 cut(s) 56, 687
BstPI GGTNACC 1 cut(s) 1474
BstSCI CCNGG 2 cut(s) 1377, 1444
BstSFI CTRYAG 4 cut(s) 675, 1428, 1764, 2162
BstSLI GKGCMC 1 cut(s) 251
BstUI CGCG 2 cut(s) 118, 1404
BstV1I GCAGC 7 cut(s) 689, 811, 885, 888, 1386, 2176, 2179
BstV2I GAAGAC 1 cut(s) 2310
BstX2I RGATCY 3 cut(s) 261, 1260, 1305
BstYI RGATCY 3 cut(s) 261, 1260, 1305
BsuI GTATCC 2 cut(s) 655, 1630
BsuRI GGCC 6 cut(s) 173, 330, 1109, 1339, 1557, 2322
BtgI CCRYGG 2 cut(s) 1402, 1943
BtgZI GCGATG 1 cut(s) 1384
BtsCI GGATG 9 cut(s) 303, 337, 541, 912, 917, 1824, 1953, 1984, 2283
BtsI GCAGTG 5 cut(s) 270, 502, 972, 1362, 1914
BveI ACCTGC 2 cut(s) 74, 130
Cac8I GCNNGC 7 cut(s) 54, 189, 618, 685, 1418, 1665, 1953
CciI TCATGA 1 cut(s) 426
CfoI GCGC 3 cut(s) 1054, 1422, 1534
Cfr13I GGNCC 7 cut(s) 86, 316, 328, 383, 515, 725, 1108
Cfr42I CCGCGG 1 cut(s) 1405
CseI GACGC 2 cut(s) 1974, 2229
Csp6I GTAC 5 cut(s) 762, 1044, 1399, 1540, 1845
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviQI GTAC 5 cut(s) 762, 1044, 1399, 1540, 1845
DdeI CTNAG 9 cut(s) 552, 876, 949, 1167, 1319, 1510, 1641, 2089, 2151
EaeI YGGCCR 1 cut(s) 1555
Eam1104I CTCTTC 2 cut(s) 342, 393
EarI CTCTTC 2 cut(s) 342, 393
EciI GGCGGA 1 cut(s) 174
Eco130I CCWWGG 2 cut(s) 160, 324
Eco147I AGGCCT 1 cut(s) 1339
Eco24I GRGCYC 2 cut(s) 76, 354
Eco31I GGTCTC 1 cut(s) 1388
Eco32I GATATC 1 cut(s) 2104
Eco47I GGWCC 5 cut(s) 86, 316, 383, 515, 725
Eco47III AGCGCT 1 cut(s) 1053
Eco57I CTGAAG 4 cut(s) 366, 741, 1092, 1826
Eco88I CYCGRG 1 cut(s) 2051
Eco91I GGTNACC 1 cut(s) 1474
EcoNI CCTNNNNNAGG 1 cut(s) 81
EcoO109I RGGNCCY 1 cut(s) 725
EcoO65I GGTNACC 1 cut(s) 1474
EcoRII CCWGG 2 cut(s) 1377, 1444
EcoRV GATATC 1 cut(s) 2104
EcoT14I CCWWGG 2 cut(s) 160, 324
EcoT38I GRGCYC 2 cut(s) 76, 354
ErhI CCWWGG 2 cut(s) 160, 324
Esp3I CGTCTC 1 cut(s) 1992
FauI CCCGC 1 cut(s) 1397
FauNDI CATATG 1 cut(s) 2329
FbaI TGATCA 1 cut(s) 439
FokI GGATG 9 cut(s) 310, 324, 548, 899, 904, 1811, 1960, 1991, 2290
FriOI GRGCYC 2 cut(s) 76, 354
FspBI CTAG 4 cut(s) 1062, 1343, 1686, 2016
GlaI GCGC 3 cut(s) 1053, 1421, 1533
GsuI CTGGAG 5 cut(s) 90, 111, 687, 869, 1068
HaeII RGCGCY 1 cut(s) 1055
HaeIII GGCC 6 cut(s) 173, 330, 1109, 1339, 1557, 2322
HgaI GACGC 2 cut(s) 1974, 2229
HhaI GCGC 3 cut(s) 1054, 1422, 1534
Hin1I GRCGYC 1 cut(s) 2221
Hin6I GCGC 3 cut(s) 1052, 1420, 1532
HinP1I GCGC 3 cut(s) 1052, 1420, 1532
HincII GTYRAC 2 cut(s) 1393, 1438
HindII GTYRAC 2 cut(s) 1393, 1438
HindIII AAGCTT 1 cut(s) 1808
HinfI GANTC 8 cut(s) 131, 474, 487, 947, 1145, 1454, 1567, 2096
HpaI GTTAAC 1 cut(s) 1393
HphI GGTGA 2 cut(s) 386, 1109
Hpy166II GTNNAC 8 cut(s) 233, 249, 1256, 1393, 1438, 1542, 1709, 1781
Hpy8I GTNNAC 8 cut(s) 233, 249, 1256, 1393, 1438, 1542, 1709, 1781
Hpy99I CGWCG 1 cut(s) 2223
HpyAV CCTTC 9 cut(s) 341, 351, 441, 716, 964, 1067, 1557, 1692, 2249
HpyCH4III ACNGT 4 cut(s) 761, 1549, 1724, 1768
HpyCH4IV ACGT 4 cut(s) 235, 642, 1434, 1899
HpyF3I CTNAG 9 cut(s) 552, 876, 949, 1167, 1319, 1510, 1641, 2089, 2151
HpySE526I ACGT 4 cut(s) 235, 642, 1434, 1899
Hsp92I GRCGYC 1 cut(s) 2221
HspAI GCGC 3 cut(s) 1052, 1420, 1532
Ksp22I TGATCA 1 cut(s) 439
KspAI GTTAAC 1 cut(s) 1393
KspI CCGCGG 1 cut(s) 1405
LguI GCTCTTC 1 cut(s) 342
LmnI GCTCC 5 cut(s) 71, 130, 589, 668, 1049
Lsp1109I GCAGC 7 cut(s) 689, 811, 885, 888, 1386, 2176, 2179
MaeI CTAG 4 cut(s) 1062, 1343, 1686, 2016
MaeII ACGT 4 cut(s) 235, 642, 1434, 1899
MaeIII GTNAC 5 cut(s) 494, 1116, 1288, 1474, 1768
MboII GAAGA 9 cut(s) 106, 359, 380, 622, 707, 1089, 1784, 2278, 2315
MfeI CAATTG 1 cut(s) 1969
MflI RGATCY 3 cut(s) 261, 1260, 1305
MhlI GDGCHC 3 cut(s) 76, 251, 354
MlsI TGGCCA 1 cut(s) 1557
MluNI TGGCCA 1 cut(s) 1557
MlyI GAGTC 3 cut(s) 481, 941, 1448
MmeI TCCRAC 2 cut(s) 343, 2171
Mox20I TGGCCA 1 cut(s) 1557
MscI TGGCCA 1 cut(s) 1557
MseI TTAA 6 cut(s) 417, 1083, 1392, 1577, 1835, 2204
MslI CAYNNNNRTG 3 cut(s) 1547, 1601, 2028
Msp20I TGGCCA 1 cut(s) 1557
MspA1I CMGCKG 4 cut(s) 944, 1130, 1404, 1628
MspR9I CCNGG 2 cut(s) 1379, 1446
MunI CAATTG 1 cut(s) 1969
Mva1269I GAATGC 4 cut(s) 15, 658, 977, 1422
MvaI CCWGG 2 cut(s) 1379, 1446
MvnI CGCG 2 cut(s) 118, 1404
NdeI CATATG 1 cut(s) 2329
NlaIV GGNNCC 2 cut(s) 73, 961
NmuCI GTSAC 1 cut(s) 494
NspI RCATGY 2 cut(s) 56, 687
OliI CACNNNNGTG 1 cut(s) 1547
PaeI GCATGC 2 cut(s) 56, 687
PaeR7I CTCGAG 1 cut(s) 2051
PagI TCATGA 1 cut(s) 426
PceI AGGCCT 1 cut(s) 1339
PciSI GCTCTTC 1 cut(s) 342
PcsI WCGNNNNNNNCGW 1 cut(s) 397
PctI GAATGC 4 cut(s) 15, 658, 977, 1422
PfeI GAWTC 5 cut(s) 131, 474, 1145, 1567, 2096
PflMI CCANNNNNTGG 2 cut(s) 325, 1040
PleI GAGTC 3 cut(s) 481, 941, 1448
PpsI GAGTC 3 cut(s) 481, 941, 1448
Ppu21I YACGTR 2 cut(s) 236, 1900
PpuMI RGGWCCY 1 cut(s) 725
PshBI ATTAAT 1 cut(s) 1083
PsiI TTATAA 1 cut(s) 777
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 2 cut(s) 1377, 1444
PspEI GGTNACC 1 cut(s) 1474
PspGI CCWGG 2 cut(s) 1377, 1444
PspN4I GGNNCC 2 cut(s) 73, 961
PspPI GGNCC 7 cut(s) 86, 316, 328, 383, 515, 725, 1108
PspPPI RGGWCCY 1 cut(s) 725
PsrI GAACNNNNNNTAC 2 cut(s) 1726, 1758
PstI CTGCAG 2 cut(s) 679, 2166
PsuI RGATCY 3 cut(s) 261, 1260, 1305
PvuII CAGCTG 3 cut(s) 944, 1130, 1628
RsaI GTAC 5 cut(s) 763, 1045, 1400, 1541, 1846
RsaNI GTAC 5 cut(s) 762, 1044, 1399, 1540, 1845
RseI CAYNNNNRTG 3 cut(s) 1547, 1601, 2028
SacII CCGCGG 1 cut(s) 1405
SapI GCTCTTC 1 cut(s) 342
SaqAI TTAA 6 cut(s) 417, 1083, 1392, 1577, 1835, 2204
Sau96I GGNCC 7 cut(s) 86, 316, 328, 383, 515, 725, 1108
SchI GAGTC 3 cut(s) 481, 941, 1448
ScrFI CCNGG 2 cut(s) 1379, 1446
SduI GDGCHC 3 cut(s) 76, 251, 354
SfcI CTRYAG 4 cut(s) 675, 1428, 1764, 2162
Sfr274I CTCGAG 1 cut(s) 2051
Sfr303I CCGCGG 1 cut(s) 1405
SgrBI CCGCGG 1 cut(s) 1405
SinI GGWCC 5 cut(s) 86, 316, 383, 515, 725
SlaI CTCGAG 1 cut(s) 2051
SmiMI CAYNNNNRTG 3 cut(s) 1547, 1601, 2028
SmlI CTYRAG 1 cut(s) 2051
SmoI CTYRAG 1 cut(s) 2051
SphI GCATGC 2 cut(s) 56, 687
SseBI AGGCCT 1 cut(s) 1339
SsiI CCGC 7 cut(s) 116, 185, 681, 963, 1402, 1404, 1667
SspI AATATT 1 cut(s) 1330
SspMI CTAG 4 cut(s) 1062, 1343, 1686, 2016
StuI AGGCCT 1 cut(s) 1339
StyD4I CCNGG 2 cut(s) 1377, 1444
StyI CCWWGG 2 cut(s) 160, 324
TaaI ACNGT 4 cut(s) 761, 1549, 1724, 1768
TaiI ACGT 4 cut(s) 238, 645, 1437, 1902
TaqI TCGA 4 cut(s) 92, 1570, 2052, 2132
TatI WGTACW 3 cut(s) 761, 1539, 1844
TauI GCSGC 3 cut(s) 683, 965, 1670
TfiI GAWTC 5 cut(s) 131, 474, 1145, 1567, 2096
Tru1I TTAA 6 cut(s) 417, 1083, 1392, 1577, 1835, 2204
Tru9I TTAA 6 cut(s) 417, 1083, 1392, 1577, 1835, 2204
TseFI GTSAC 1 cut(s) 494
TseI GCWGC 7 cut(s) 677, 799, 898, 901, 1374, 2164, 2167
Tsp45I GTSAC 1 cut(s) 494
TspGWI ACGGA 2 cut(s) 1694, 1960
Van91I CCANNNNNTGG 2 cut(s) 325, 1040
VneI GTGCAC 1 cut(s) 247
VpaK11BI GGWCC 5 cut(s) 86, 316, 383, 515, 725
VspI ATTAAT 1 cut(s) 1083
XagI CCTNNNNNAGG 1 cut(s) 81
XapI RAATTY 6 cut(s) 111, 575, 1754, 2040, 2142, 2361
XceI RCATGY 2 cut(s) 56, 687
XcmI CCANNNNNNNNNTGG 2 cut(s) 361, 509
XhoI CTCGAG 1 cut(s) 2051
XspI CTAG 4 cut(s) 1062, 1343, 1686, 2016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.